Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09700.t1 | XP_003611401.2 | 99.5 | 398 | 2 | 0 | 2 | 399 | 115 | 512 | 3.90E-209 | 737.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09700.t1 | Q8RY73 | 77.7 | 349 | 78 | 0 | 51 | 399 | 185 | 533 | 8.5e-165 | 581.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09700.t1 | G7JYM5 | 99.5 | 398 | 2 | 0 | 2 | 399 | 115 | 512 | 2.8e-209 | 737.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09700 | MS.gene050621 | PPI |
| MS.gene09700 | MS.gene76412 | PPI |
| MS.gene09700 | MS.gene024471 | PPI |
| MS.gene09700 | MS.gene012007 | PPI |
| MS.gene09700 | MS.gene22822 | PPI |
| MS.gene87461 | MS.gene09700 | PPI |
| MS.gene09700 | MS.gene025936 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09700.t1 | MTR_5g013580 | 99.749 | 398 | 1 | 0 | 2 | 399 | 115 | 512 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09700.t1 | AT4G17620 | 74.000 | 400 | 99 | 2 | 2 | 399 | 137 | 533 | 0.0 | 585 |
| MS.gene09700.t1 | AT4G17620 | 73.500 | 400 | 101 | 2 | 2 | 399 | 137 | 533 | 0.0 | 578 |
| MS.gene09700.t1 | AT4G17620 | 72.500 | 400 | 97 | 3 | 2 | 399 | 137 | 525 | 0.0 | 563 |
Find 95 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGCTCTCCGTCTGCTCTTC+TGG | 0.061101 | 5.2:-5587108 | None:intergenic |
| AAATCACTTTGTGGTCTTTC+TGG | 0.112221 | 5.2:-5586511 | None:intergenic |
| CATATATTTGTATAGGATTT+AGG | 0.156099 | 5.2:+5587583 | MS.gene09700:CDS |
| TTCTGTGATTAAGACAAAAT+TGG | 0.167983 | 5.2:+5587163 | MS.gene09700:CDS |
| TTTGGCAATTAGATGTTATC+TGG | 0.198464 | 5.2:+5587052 | MS.gene09700:intron |
| TATCCTCAGAGGCAGAATTT+TGG | 0.221848 | 5.2:+5584305 | MS.gene09700:CDS |
| GAGAGAAACTGCTAAAGTTT+TGG | 0.230993 | 5.2:+5587427 | MS.gene09700:CDS |
| TGACAGAGTTTCTTCACTTT+TGG | 0.232467 | 5.2:-5584390 | None:intergenic |
| TATTCTCTGTGTAATATCTT+TGG | 0.238375 | 5.2:-5587815 | None:intergenic |
| CTAAATCCTATACAAATATA+TGG | 0.300599 | 5.2:-5587582 | None:intergenic |
| CGCCATATCACTGAAGATAT+TGG | 0.313720 | 5.2:+5585831 | MS.gene09700:CDS |
| GTTGATTACCTACCACAAAA+TGG | 0.317863 | 5.2:-5586113 | None:intergenic |
| GGCTCTCCGTCTGCTCTTCT+GGG | 0.318433 | 5.2:-5587107 | None:intergenic |
| CGCGCCACCTTTCAACCGTT+TGG | 0.326781 | 5.2:+5588312 | MS.gene09700:CDS |
| GAGGTATTATGCTGGCTTTA+TGG | 0.328410 | 5.2:+5588133 | MS.gene09700:CDS |
| CTCCAATATCTTCAGTGATA+TGG | 0.332949 | 5.2:-5585833 | None:intergenic |
| TCTGTGATTAAGACAAAATT+GGG | 0.335148 | 5.2:+5587164 | MS.gene09700:CDS |
| CTTGCAGATTCAGTCATTCC+TGG | 0.335151 | 5.2:+5587551 | MS.gene09700:intron |
| CCGGGTTGTTCGTATTATTA+CGG | 0.353547 | 5.2:-5584199 | None:intergenic |
| CGCCATGAGCCTTGGGAAAT+GGG | 0.358477 | 5.2:+5586442 | MS.gene09700:CDS |
| TCGCCATGAGCCTTGGGAAA+TGG | 0.363810 | 5.2:+5586441 | MS.gene09700:CDS |
| AGGTGACTTGTTATTACATC+TGG | 0.374070 | 5.2:-5588358 | None:intergenic |
| CTGCCTGGCGTTTGCGGACG+AGG | 0.388026 | 5.2:+5588114 | MS.gene09700:CDS |
| CTTATATTCGCCATGAGCCT+TGG | 0.404077 | 5.2:+5586434 | MS.gene09700:CDS |
| GCTGGCATTCTTCCGCGTCC+TGG | 0.412844 | 5.2:+5584278 | MS.gene09700:CDS |
| AAATTCTGCCTCTGAGGATA+AGG | 0.415076 | 5.2:-5584302 | None:intergenic |
| TGGAGTCTGCCTGGCGTTTG+CGG | 0.424538 | 5.2:+5588108 | MS.gene09700:CDS |
| ATGATGCAGGCCGTCTTGTT+CGG | 0.436710 | 5.2:+5587776 | MS.gene09700:CDS |
| AAATATATGGAACGCCTGCC+AGG | 0.440933 | 5.2:-5587569 | None:intergenic |
| CTGCGATCTAAATCACTTTG+TGG | 0.446570 | 5.2:-5586520 | None:intergenic |
| TTATATTCGCCATGAGCCTT+GGG | 0.449517 | 5.2:+5586435 | MS.gene09700:CDS |
| GCTATAGTCGTGCAGAAGGC+GGG | 0.453075 | 5.2:+5585652 | MS.gene09700:CDS |
| GGCGTTCCATATATTTGTAT+AGG | 0.453770 | 5.2:+5587576 | MS.gene09700:CDS |
| TTGGCAGGGTGGAGTCTGCC+TGG | 0.464806 | 5.2:+5588099 | MS.gene09700:intron |
| GACTTAGGCTCAGAAGGTTA+TGG | 0.475541 | 5.2:+5586042 | MS.gene09700:intron |
| GTTGTTCGTATTATTACGGA+TGG | 0.484281 | 5.2:-5584195 | None:intergenic |
| TTCTGGGATCTTCAGTGGCA+AGG | 0.495567 | 5.2:-5587091 | None:intergenic |
| GCCTTCTGCACGACTATAGC+AGG | 0.501287 | 5.2:-5585649 | None:intergenic |
| GGGGTGGTGGACGTGGTCGT+TGG | 0.505862 | 5.2:+5584228 | MS.gene09700:CDS |
| TTGTGTACTCCCATTTCCCA+AGG | 0.506004 | 5.2:-5586451 | None:intergenic |
| TTGGCAATTAGATGTTATCT+GGG | 0.506474 | 5.2:+5587053 | MS.gene09700:intron |
| CAGCATAATGATAGAGGAGC+TGG | 0.510421 | 5.2:+5584260 | MS.gene09700:CDS |
| TGCTATAGTCGTGCAGAAGG+CGG | 0.514503 | 5.2:+5585651 | MS.gene09700:CDS |
| TGAAGAAACTCTGTCAAGAA+AGG | 0.514756 | 5.2:+5584397 | MS.gene09700:CDS |
| GGACGTGGTCGTTGGCAACA+AGG | 0.516272 | 5.2:+5584236 | MS.gene09700:CDS |
| CTCCCATTTCCCAAGGCTCA+TGG | 0.517450 | 5.2:-5586444 | None:intergenic |
| CAAGGGCAGCATAATGATAG+AGG | 0.517610 | 5.2:+5584254 | MS.gene09700:CDS |
| AATACGAACAACCCGGGAAG+AGG | 0.518689 | 5.2:+5584206 | MS.gene09700:CDS |
| TGCCTCTGAGGATAAGGTCC+AGG | 0.524197 | 5.2:-5584296 | None:intergenic |
| TATCTTGATGGGTGCTGAGA+TGG | 0.529076 | 5.2:+5587196 | MS.gene09700:CDS |
| CAGATTCAGTCATTCCTGGC+AGG | 0.531148 | 5.2:+5587555 | MS.gene09700:intron |
| TGCTGTGATACGACTACTGA+TGG | 0.531330 | 5.2:+5587221 | MS.gene09700:CDS |
| ATACCTCGTCCGCAAACGCC+AGG | 0.534549 | 5.2:-5588117 | None:intergenic |
| GGGAAATGGGAGTACACAAA+AGG | 0.545125 | 5.2:+5586455 | MS.gene09700:CDS |
| ATACGAACAACCCGGGAAGA+GGG | 0.552800 | 5.2:+5584207 | MS.gene09700:CDS |
| GGGGCTCACCGTATCTTGAT+GGG | 0.555557 | 5.2:+5587185 | MS.gene09700:CDS |
| AGAAGTTCCAAACGGTTGAA+AGG | 0.557237 | 5.2:-5588319 | None:intergenic |
| CTGTCATACAGGGATGATGC+AGG | 0.560137 | 5.2:+5587763 | MS.gene09700:intron |
| AAAACAGACTTAGGCTCAGA+AGG | 0.561278 | 5.2:+5586036 | MS.gene09700:intron |
| TTGCGGACGAGGTATTATGC+TGG | 0.562925 | 5.2:+5588125 | MS.gene09700:CDS |
| ACGAACAACCCGGGAAGAGG+GGG | 0.566118 | 5.2:+5584209 | MS.gene09700:CDS |
| TGCTCTTCTGGGATCTTCAG+TGG | 0.571759 | 5.2:-5587096 | None:intergenic |
| CACAAAGTGATTTAGATCGC+AGG | 0.574140 | 5.2:+5586521 | MS.gene09700:CDS |
| TGAGGATAAGGTCCAGGACG+CGG | 0.577599 | 5.2:-5584290 | None:intergenic |
| CTATAGTCGTGCAGAAGGCG+GGG | 0.578781 | 5.2:+5585653 | MS.gene09700:CDS |
| GACGTGGTCGTTGGCAACAA+GGG | 0.579752 | 5.2:+5584237 | MS.gene09700:CDS |
| GAAGATCCCAGAAGAGCAGA+CGG | 0.581979 | 5.2:+5587101 | MS.gene09700:CDS |
| ATTGGAGCTGATTTGAACGA+AGG | 0.584782 | 5.2:+5585849 | MS.gene09700:CDS |
| CTATAGCAGGCAAGTTCACA+AGG | 0.584854 | 5.2:-5585636 | None:intergenic |
| TACGAACAACCCGGGAAGAG+GGG | 0.585770 | 5.2:+5584208 | MS.gene09700:CDS |
| CACAGAACAAAATTCAACAT+TGG | 0.586435 | 5.2:-5587147 | None:intergenic |
| GCCTGCTATAGTCGTGCAGA+AGG | 0.591701 | 5.2:+5585648 | MS.gene09700:CDS |
| GAGCTTGCAGAAGTTCCAAA+CGG | 0.601546 | 5.2:-5588327 | None:intergenic |
| TACCCAAAATTCTGCCTCTG+AGG | 0.603135 | 5.2:-5584308 | None:intergenic |
| TCTCAGCACCCATCAAGATA+CGG | 0.605709 | 5.2:-5587193 | None:intergenic |
| TTGGCATCAACATCATGTAT+CGG | 0.605933 | 5.2:-5587128 | None:intergenic |
| CCGTAATAATACGAACAACC+CGG | 0.607451 | 5.2:+5584199 | MS.gene09700:CDS |
| AGATGTAATAACAAGTCACC+TGG | 0.607473 | 5.2:+5588360 | MS.gene09700:CDS |
| TTCGTATTATTACGGATGGG+AGG | 0.610071 | 5.2:-5584191 | None:intergenic |
| TTGTTCGTATTATTACGGAT+GGG | 0.612923 | 5.2:-5584194 | None:intergenic |
| TTACCTTGTTCAGATTGTTG+CGG | 0.618634 | 5.2:-5586243 | None:intergenic |
| TATGGTAATAGGTTTCAGAA+TGG | 0.620990 | 5.2:+5584329 | MS.gene09700:CDS |
| CTGTGATTAAGACAAAATTG+GGG | 0.629784 | 5.2:+5587165 | MS.gene09700:CDS |
| AGTTCCAAACGGTTGAAAGG+TGG | 0.634627 | 5.2:-5588316 | None:intergenic |
| GCATTTCAGTCCGAACAAGA+CGG | 0.638960 | 5.2:-5587786 | None:intergenic |
| ATGGGAGTACACAAAAGGAA+TGG | 0.640999 | 5.2:+5586460 | MS.gene09700:CDS |
| CGTAATAATACGAACAACCC+GGG | 0.655412 | 5.2:+5584200 | MS.gene09700:CDS |
| AGACAAAACGTTCATCGCGG+TGG | 0.657013 | 5.2:-5584352 | None:intergenic |
| GTCCTGGACCTTATCCTCAG+AGG | 0.674041 | 5.2:+5584294 | MS.gene09700:CDS |
| TGTGATTAAGACAAAATTGG+GGG | 0.674231 | 5.2:+5587166 | MS.gene09700:CDS |
| AAAGTGATTTAGATCGCAGG+AGG | 0.695618 | 5.2:+5586524 | MS.gene09700:CDS |
| GTACCGCAACAATCTGAACA+AGG | 0.701773 | 5.2:+5586240 | MS.gene09700:CDS |
| GCAGTTGAATTATCATAACG+AGG | 0.728754 | 5.2:+5587392 | MS.gene09700:intron |
| GGAGTTAAAGACAAGTTACG+AGG | 0.731121 | 5.2:+5587259 | MS.gene09700:CDS |
| CAGAGACAAAACGTTCATCG+CGG | 0.738071 | 5.2:-5584355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTACTTGAAAAAAATTA+TGG | - | chr5.2:5586815-5586834 | None:intergenic | 10.0% |
| !! | ATCATCATTTAAAAAATTAA+TGG | - | chr5.2:5583970-5583989 | None:intergenic | 10.0% |
| !!! | ATAATTTTTTTCAAGTAAAT+TGG | + | chr5.2:5586814-5586833 | MS.gene09700:intron | 10.0% |
| !!! | ATTTTTAAATGATAAACTAA+CGG | + | chr5.2:5583578-5583597 | MS.gene09700:intron | 10.0% |
| !! | ATATAATAAAAAACTTAGCA+TGG | + | chr5.2:5583926-5583945 | MS.gene09700:intron | 15.0% |
| !! | ATCATAAATTAAATTTCCAA+TGG | - | chr5.2:5586184-5586203 | None:intergenic | 15.0% |
| !! | TTTAAATGATGATAAATCAA+CGG | + | chr5.2:5583977-5583996 | MS.gene09700:intron | 15.0% |
| !!! | ATAAATAAGATACCTTTTTT+GGG | - | chr5.2:5585891-5585910 | None:intergenic | 15.0% |
| !!! | ATTGGAAATTTAATTTATGA+TGG | + | chr5.2:5586183-5586202 | MS.gene09700:intron | 15.0% |
| !! | AATCATCATATAGCTAATTA+AGG | + | chr5.2:5587984-5588003 | MS.gene09700:intron | 20.0% |
| !! | ATGTCTTAAAATAATCATGA+AGG | - | chr5.2:5585549-5585568 | None:intergenic | 20.0% |
| !! | CATATATTTGTATAGGATTT+AGG | + | chr5.2:5587583-5587602 | MS.gene09700:CDS | 20.0% |
| !! | CTAAATCCTATACAAATATA+TGG | - | chr5.2:5587585-5587604 | None:intergenic | 20.0% |
| !! | TAAAAAGTCTCTAAATAAAC+AGG | - | chr5.2:5585809-5585828 | None:intergenic | 20.0% |
| !! | TAATTGAATATCATCTTTAG+AGG | + | chr5.2:5588008-5588027 | MS.gene09700:intron | 20.0% |
| !! | TTATAATAAAAAAATCGTGC+TGG | + | chr5.2:5583511-5583530 | MS.gene09700:intron | 20.0% |
| !! | TTATCTATAAATAAACTGCT+GGG | + | chr5.2:5585907-5585926 | MS.gene09700:intron | 20.0% |
| !! | TTTATCTATAAATAAACTGC+TGG | + | chr5.2:5585906-5585925 | MS.gene09700:intron | 20.0% |
| !!! | AAAAAATCTATAAGCTTGTT+TGG | + | chr5.2:5583696-5583715 | MS.gene09700:intron | 20.0% |
| !!! | AAAAAATGAATGCTTTTATC+TGG | - | chr5.2:5586138-5586157 | None:intergenic | 20.0% |
| !!! | AATTTTGTTTTATAATCCCA+CGG | - | chr5.2:5583894-5583913 | None:intergenic | 20.0% |
| !!! | ATAACAAACTCTATTTTGAT+TGG | - | chr5.2:5588215-5588234 | None:intergenic | 20.0% |
| !!! | CATGATTATTTTATGACATT+TGG | + | chr5.2:5585501-5585520 | MS.gene09700:intron | 20.0% |
| !!! | GAGCTTTTATTATATATGTA+TGG | + | chr5.2:5585323-5585342 | MS.gene09700:intron | 20.0% |
| !!! | GATAAATAAGATACCTTTTT+TGG | - | chr5.2:5585892-5585911 | None:intergenic | 20.0% |
| !!! | TAAAAGAAATTTTAGCACAT+GGG | - | chr5.2:5586396-5586415 | None:intergenic | 20.0% |
| !!! | TAATATGCTTTAACTAGTTT+TGG | + | chr5.2:5587650-5587669 | MS.gene09700:intron | 20.0% |
| !!! | TCATTATCAACATAATTTGT+TGG | + | chr5.2:5588080-5588099 | MS.gene09700:intron | 20.0% |
| !!! | TCTATAGTTTTAATATTTCG+TGG | + | chr5.2:5585347-5585366 | MS.gene09700:intron | 20.0% |
| !!! | TTTCTTGATTCGTTTTTTTA+TGG | + | chr5.2:5584140-5584159 | MS.gene09700:intron | 20.0% |
| !!! | TTTGACTTGGATATTAATTA+GGG | + | chr5.2:5584986-5585005 | MS.gene09700:intron | 20.0% |
| !!! | TTTTATCTACAAGGTAATTT+AGG | + | chr5.2:5583819-5583838 | MS.gene09700:intron | 20.0% |
| !!! | TTTTTTTCAAGTAAATTGGT+TGG | + | chr5.2:5586818-5586837 | MS.gene09700:intron | 20.0% |
| ! | AAAAAGTGAAACCATAAAGT+GGG | - | chr5.2:5586999-5587018 | None:intergenic | 25.0% |
| ! | AAATACTTTCTTTGAGCAAT+AGG | - | chr5.2:5586703-5586722 | None:intergenic | 25.0% |
| ! | ACACAGAGAATAAAAATGAA+GGG | + | chr5.2:5587826-5587845 | MS.gene09700:CDS | 25.0% |
| ! | ACTTGAAAAAAATTATGGCT+CGG | - | chr5.2:5586810-5586829 | None:intergenic | 25.0% |
| ! | AGCCAAAAAAAAAAAACAGA+TGG | - | chr5.2:5588190-5588209 | None:intergenic | 25.0% |
| ! | AGGATACTAATGCAATAAAA+AGG | + | chr5.2:5586859-5586878 | MS.gene09700:intron | 25.0% |
| ! | AGGGAAAGACTAAAATTATT+AGG | - | chr5.2:5584899-5584918 | None:intergenic | 25.0% |
| ! | ATAATCAGAACATATACATC+TGG | - | chr5.2:5585594-5585613 | None:intergenic | 25.0% |
| ! | ATAATCATGAAGGATGAAAA+AGG | - | chr5.2:5585539-5585558 | None:intergenic | 25.0% |
| ! | CAATAAACAAACATTAACAG+AGG | - | chr5.2:5588263-5588282 | None:intergenic | 25.0% |
| ! | CCAACATAAAACTATTCAAA+AGG | - | chr5.2:5587340-5587359 | None:intergenic | 25.0% |
| ! | CTCTGTTAATGTTTGTTTAT+TGG | + | chr5.2:5588261-5588280 | MS.gene09700:intron | 25.0% |
| ! | CTCTTAATATTATAAGCCAT+TGG | + | chr5.2:5586165-5586184 | MS.gene09700:intron | 25.0% |
| ! | GGATTATAAAACAAAATTGC+GGG | + | chr5.2:5583896-5583915 | MS.gene09700:intron | 25.0% |
| ! | GGGAAAGACTAAAATTATTA+GGG | - | chr5.2:5584898-5584917 | None:intergenic | 25.0% |
| ! | GGGATTATAAAACAAAATTG+CGG | + | chr5.2:5583895-5583914 | MS.gene09700:intron | 25.0% |
| ! | GTGAAAACTATAATCTGAAA+TGG | + | chr5.2:5588047-5588066 | MS.gene09700:intron | 25.0% |
| ! | TAAAAAGTGAAACCATAAAG+TGG | - | chr5.2:5587000-5587019 | None:intergenic | 25.0% |
| ! | TACACAGAGAATAAAAATGA+AGG | + | chr5.2:5587825-5587844 | MS.gene09700:CDS | 25.0% |
| ! | TACTTAAAAACACAAAGAAG+TGG | - | chr5.2:5584793-5584812 | None:intergenic | 25.0% |
| ! | TATTCTCTGTGTAATATCTT+TGG | - | chr5.2:5587818-5587837 | None:intergenic | 25.0% |
| ! | TCTGTGATTAAGACAAAATT+GGG | + | chr5.2:5587164-5587183 | MS.gene09700:CDS | 25.0% |
| ! | TTAACTGTTGGACAAATTAA+TGG | + | chr5.2:5586966-5586985 | MS.gene09700:intron | 25.0% |
| ! | TTCAAAAGGAAAACTAAATC+TGG | - | chr5.2:5587326-5587345 | None:intergenic | 25.0% |
| ! | TTCAAATTAACAGTGGAAAT+AGG | - | chr5.2:5587911-5587930 | None:intergenic | 25.0% |
| ! | TTCATATTGAGTTTGAATGT+TGG | + | chr5.2:5585252-5585271 | MS.gene09700:intron | 25.0% |
| ! | TTCTGTGATTAAGACAAAAT+TGG | + | chr5.2:5587163-5587182 | MS.gene09700:CDS | 25.0% |
| ! | TTTCTTCATTATGTTGAAAC+TGG | + | chr5.2:5584615-5584634 | MS.gene09700:intron | 25.0% |
| !! | AAGTACGAATTTTCATTGTA+AGG | - | chr5.2:5587707-5587726 | None:intergenic | 25.0% |
| !! | AGTCTTAAAGTATTTGTCTT+TGG | + | chr5.2:5587034-5587053 | MS.gene09700:intron | 25.0% |
| !! | GATAAAATGAAGTACCATTA+TGG | - | chr5.2:5583806-5583825 | None:intergenic | 25.0% |
| !! | TTTGACTCGAGTATTAATTA+TGG | + | chr5.2:5584693-5584712 | MS.gene09700:intron | 25.0% |
| !!! | ATGGTTTCACTTTTTATGAT+TGG | + | chr5.2:5587004-5587023 | MS.gene09700:intron | 25.0% |
| !!! | CACCATCTGTTTTTTTTTTT+TGG | + | chr5.2:5588185-5588204 | MS.gene09700:intron | 25.0% |
| !!! | CCTTTTGAATAGTTTTATGT+TGG | + | chr5.2:5587337-5587356 | MS.gene09700:intron | 25.0% |
| !!! | GTAAAAGAAATTTTAGCACA+TGG | - | chr5.2:5586397-5586416 | None:intergenic | 25.0% |
| !!! | GTTTGACTTGGATATTAATT+AGG | + | chr5.2:5584985-5585004 | MS.gene09700:intron | 25.0% |
| !!! | GTTTTAATATTTCGTGGTTT+TGG | + | chr5.2:5585353-5585372 | MS.gene09700:intron | 25.0% |
| !!! | TATGACATTTGGTGTTATTA+TGG | + | chr5.2:5585512-5585531 | MS.gene09700:intron | 25.0% |
| !!! | TATTGCTCAAAGAAAGTATT+TGG | + | chr5.2:5586702-5586721 | MS.gene09700:intron | 25.0% |
| !!! | TCATATGATTTTGTTTGACT+TGG | + | chr5.2:5584973-5584992 | MS.gene09700:intron | 25.0% |
| !!! | TTTCACTTTTTATGATTGGT+TGG | + | chr5.2:5587008-5587027 | MS.gene09700:intron | 25.0% |
| AATGTAACCAATACAACAAC+AGG | + | chr5.2:5586659-5586678 | MS.gene09700:intron | 30.0% | |
| AATTACCAGTGTTTCCTTTA+CGG | + | chr5.2:5583856-5583875 | MS.gene09700:intron | 30.0% | |
| ACAATGAAAATTCGTACTTC+TGG | + | chr5.2:5587708-5587727 | MS.gene09700:intron | 30.0% | |
| ACAGCTGAATTAAACTGAAA+TGG | - | chr5.2:5586361-5586380 | None:intergenic | 30.0% | |
| ACTGGTAATTGTTTCCTATA+AGG | - | chr5.2:5583846-5583865 | None:intergenic | 30.0% | |
| AGCCATGTAAATCATGTAAA+TGG | + | chr5.2:5586583-5586602 | MS.gene09700:intron | 30.0% | |
| CAAAAAGTTCAAACAACAGA+TGG | - | chr5.2:5585207-5585226 | None:intergenic | 30.0% | |
| CAAAGAAAGTGAGTATTACT+AGG | + | chr5.2:5588162-5588181 | MS.gene09700:intron | 30.0% | |
| CACAGAACAAAATTCAACAT+TGG | - | chr5.2:5587150-5587169 | None:intergenic | 30.0% | |
| CATGAATCAGGATACAATAT+GGG | + | chr5.2:5586614-5586633 | MS.gene09700:intron | 30.0% | |
| CCAAACAAAATGTATTACAG+TGG | + | chr5.2:5583766-5583785 | MS.gene09700:intron | 30.0% | |
| CTAATACCTAAAACAGACTT+AGG | + | chr5.2:5586027-5586046 | MS.gene09700:intron | 30.0% | |
| CTGCAATTTCAAATTAACAG+TGG | - | chr5.2:5587918-5587937 | None:intergenic | 30.0% | |
| CTGTGATTAAGACAAAATTG+GGG | + | chr5.2:5587165-5587184 | MS.gene09700:CDS | 30.0% | |
| GATACATACATTCCCAAAAA+AGG | + | chr5.2:5585876-5585895 | MS.gene09700:CDS | 30.0% | |
| GATGGAAAGGCTAAAATATT+AGG | - | chr5.2:5585189-5585208 | None:intergenic | 30.0% | |
| GGAGAAGATATTGACAATAT+AGG | + | chr5.2:5586839-5586858 | MS.gene09700:intron | 30.0% | |
| GTAAATCATGTAAATGGCAA+TGG | + | chr5.2:5586589-5586608 | MS.gene09700:intron | 30.0% | |
| GTTGTAATGAAAAATTAGCG+TGG | + | chr5.2:5583536-5583555 | MS.gene09700:intron | 30.0% | |
| TAATAAAAAAATCGTGCTGG+CGG | + | chr5.2:5583514-5583533 | MS.gene09700:intron | 30.0% | |
| TATAAAACAAAATTGCGGGA+GGG | + | chr5.2:5583900-5583919 | MS.gene09700:intron | 30.0% | |
| TATGGTAATAGGTTTCAGAA+TGG | + | chr5.2:5584329-5584348 | MS.gene09700:CDS | 30.0% | |
| TCAAAAATCCAAACAACAGA+GGG | - | chr5.2:5584918-5584937 | None:intergenic | 30.0% | |
| TCATGAATCAGGATACAATA+TGG | + | chr5.2:5586613-5586632 | MS.gene09700:intron | 30.0% | |
| TGTGATTAAGACAAAATTGG+GGG | + | chr5.2:5587166-5587185 | MS.gene09700:CDS | 30.0% | |
| TTATAAAACAAAATTGCGGG+AGG | + | chr5.2:5583899-5583918 | MS.gene09700:intron | 30.0% | |
| TTGAATATCTTGTGCCATAA+TGG | + | chr5.2:5583789-5583808 | MS.gene09700:intron | 30.0% | |
| TTGATCGGTTATTACAACTT+TGG | + | chr5.2:5584025-5584044 | MS.gene09700:intron | 30.0% | |
| TTGGCAATTAGATGTTATCT+GGG | + | chr5.2:5587053-5587072 | MS.gene09700:intron | 30.0% | |
| TTGTTCGTATTATTACGGAT+GGG | - | chr5.2:5584197-5584216 | None:intergenic | 30.0% | |
| TTTGGCAATTAGATGTTATC+TGG | + | chr5.2:5587052-5587071 | MS.gene09700:intron | 30.0% | |
| ! | AAGGTAATTTAGGACCTTAT+AGG | + | chr5.2:5583829-5583848 | MS.gene09700:intron | 30.0% |
| ! | AGAGAAACTGCTAAAGTTTT+GGG | + | chr5.2:5587428-5587447 | MS.gene09700:CDS | 30.0% |
| ! | AGGATGTGTGATTTTGTAAA+TGG | + | chr5.2:5586879-5586898 | MS.gene09700:intron | 30.0% |
| ! | ATGGAATTTTTCCCACTTTA+TGG | + | chr5.2:5586985-5587004 | MS.gene09700:intron | 30.0% |
| ! | ATGTGTGATTTTGTAAATGG+AGG | + | chr5.2:5586882-5586901 | MS.gene09700:intron | 30.0% |
| ! | CCACTGTAATACATTTTGTT+TGG | - | chr5.2:5583769-5583788 | None:intergenic | 30.0% |
| ! | GGTACTTCATTTTATCTACA+AGG | + | chr5.2:5583810-5583829 | MS.gene09700:intron | 30.0% |
| ! | TAATTTGTCCAACAGTTAAG+TGG | - | chr5.2:5586965-5586984 | None:intergenic | 30.0% |
| ! | TATACTGCTTTAGCGTTTTA+GGG | + | chr5.2:5585416-5585435 | MS.gene09700:intron | 30.0% |
| ! | TCTTCAAAACATCCATTTTG+TGG | + | chr5.2:5586101-5586120 | MS.gene09700:CDS | 30.0% |
| ! | TGATGGAAAGAGATTTTATG+TGG | + | chr5.2:5587238-5587257 | MS.gene09700:CDS | 30.0% |
| ! | TGCCATTTACATGATTTACA+TGG | - | chr5.2:5586588-5586607 | None:intergenic | 30.0% |
| ! | TTTAACTTCTGTGAAGTGTA+TGG | + | chr5.2:5587865-5587884 | MS.gene09700:intron | 30.0% |
| !! | AAAGGTTATTGCTTTTCAAG+AGG | + | chr5.2:5584415-5584434 | MS.gene09700:CDS | 30.0% |
| !! | ACAAGTGTGCTCATTTTAAT+CGG | + | chr5.2:5583611-5583630 | MS.gene09700:intron | 30.0% |
| !! | AGAATTTTGGGTATGGTAAT+AGG | + | chr5.2:5584318-5584337 | MS.gene09700:CDS | 30.0% |
| !! | ATCAACATAATTTGTTGGCA+GGG | + | chr5.2:5588085-5588104 | MS.gene09700:intron | 30.0% |
| !! | GGTTATTACAACTTTGGAAT+AGG | + | chr5.2:5584031-5584050 | MS.gene09700:intron | 30.0% |
| !! | TATCAACATAATTTGTTGGC+AGG | + | chr5.2:5588084-5588103 | MS.gene09700:intron | 30.0% |
| !! | TATTGCTTTTCAAGAGGTAT+GGG | + | chr5.2:5584421-5584440 | MS.gene09700:intron | 30.0% |
| !! | TTATTGCTTTTCAAGAGGTA+TGG | + | chr5.2:5584420-5584439 | MS.gene09700:intron | 30.0% |
| !! | TTTTAGGTATTAGCAGCAAA+AGG | - | chr5.2:5586020-5586039 | None:intergenic | 30.0% |
| !!! | CAAAATGGATGTTTTGAAGA+TGG | - | chr5.2:5586101-5586120 | None:intergenic | 30.0% |
| AAAGTGAAATTGTTCGGTCT+CGG | - | chr5.2:5588238-5588257 | None:intergenic | 35.0% | |
| AAATCACTTTGTGGTCTTTC+TGG | - | chr5.2:5586514-5586533 | None:intergenic | 35.0% | |
| AAATTGCAGTAATCATCCAG+CGG | + | chr5.2:5587929-5587948 | MS.gene09700:intron | 35.0% | |
| AATGATAAACTAACGGCTGA+AGG | + | chr5.2:5583585-5583604 | MS.gene09700:intron | 35.0% | |
| AGATGTAATAACAAGTCACC+TGG | + | chr5.2:5588360-5588379 | MS.gene09700:CDS | 35.0% | |
| AGCCAAACAGTATACAATAG+TGG | + | chr5.2:5584827-5584846 | MS.gene09700:intron | 35.0% | |
| AGTTCAAACAACAGATGGAA+AGG | - | chr5.2:5585202-5585221 | None:intergenic | 35.0% | |
| ATAGTCTCTTTACCTAGTCA+TGG | + | chr5.2:5586761-5586780 | MS.gene09700:intron | 35.0% | |
| ATTAACCGTAAAGGAAACAC+TGG | - | chr5.2:5583864-5583883 | None:intergenic | 35.0% | |
| CAGAACATATACATCTGGAA+GGG | - | chr5.2:5585589-5585608 | None:intergenic | 35.0% | |
| CTCCAATATCTTCAGTGATA+TGG | - | chr5.2:5585836-5585855 | None:intergenic | 35.0% | |
| GAATAAAAATGAAGGGCTAC+TGG | + | chr5.2:5587833-5587852 | MS.gene09700:CDS | 35.0% | |
| GAGGCAAAAGTGAAATTGTT+CGG | - | chr5.2:5588244-5588263 | None:intergenic | 35.0% | |
| GCAGTTGAATTATCATAACG+AGG | + | chr5.2:5587392-5587411 | MS.gene09700:intron | 35.0% | |
| GGCGTTCCATATATTTGTAT+AGG | + | chr5.2:5587576-5587595 | MS.gene09700:CDS | 35.0% | |
| GGTTAACCAATTAACCGTAA+AGG | - | chr5.2:5583873-5583892 | None:intergenic | 35.0% | |
| GTATTAGCAGCAAAAGGAAA+AGG | - | chr5.2:5586014-5586033 | None:intergenic | 35.0% | |
| GTCAAAAATCCAAACAACAG+AGG | - | chr5.2:5584919-5584938 | None:intergenic | 35.0% | |
| GTGTTTCCTTTACGGTTAAT+TGG | + | chr5.2:5583864-5583883 | MS.gene09700:intron | 35.0% | |
| GTTGATTACCTACCACAAAA+TGG | - | chr5.2:5586116-5586135 | None:intergenic | 35.0% | |
| GTTGTTCGTATTATTACGGA+TGG | - | chr5.2:5584198-5584217 | None:intergenic | 35.0% | |
| TACTTCTTCCACTTAACTGT+TGG | + | chr5.2:5586954-5586973 | MS.gene09700:intron | 35.0% | |
| TCAGAACATATACATCTGGA+AGG | - | chr5.2:5585590-5585609 | None:intergenic | 35.0% | |
| TGAAGAAACTCTGTCAAGAA+AGG | + | chr5.2:5584397-5584416 | MS.gene09700:CDS | 35.0% | |
| TGAGTTTAGTAGTGTAGTGA+TGG | + | chr5.2:5586335-5586354 | MS.gene09700:intron | 35.0% | |
| TGCATGTCATGATTTCAACA+AGG | + | chr5.2:5587516-5587535 | MS.gene09700:intron | 35.0% | |
| TGCCACTATTGTATACTGTT+TGG | - | chr5.2:5584832-5584851 | None:intergenic | 35.0% | |
| TGCGTCATGCAATTTAAGTA+GGG | + | chr5.2:5584474-5584493 | MS.gene09700:intron | 35.0% | |
| TGGAAATAGGAAACCAATAC+AGG | - | chr5.2:5587898-5587917 | None:intergenic | 35.0% | |
| TTACCTTGTTCAGATTGTTG+CGG | - | chr5.2:5586246-5586265 | None:intergenic | 35.0% | |
| TTGCGTCATGCAATTTAAGT+AGG | + | chr5.2:5584473-5584492 | MS.gene09700:intron | 35.0% | |
| TTGGCATCAACATCATGTAT+CGG | - | chr5.2:5587131-5587150 | None:intergenic | 35.0% | |
| TTGGTATCAAGCTGATTGTA+GGG | + | chr5.2:5586721-5586740 | MS.gene09700:intron | 35.0% | |
| TTTGGTATCAAGCTGATTGT+AGG | + | chr5.2:5586720-5586739 | MS.gene09700:intron | 35.0% | |
| ! | CAAAACATCCATTTTGTGGT+AGG | + | chr5.2:5586105-5586124 | MS.gene09700:intron | 35.0% |
| ! | CTATACTGCTTTAGCGTTTT+AGG | + | chr5.2:5585415-5585434 | MS.gene09700:intron | 35.0% |
| ! | GAGAGAAACTGCTAAAGTTT+TGG | + | chr5.2:5587427-5587446 | MS.gene09700:CDS | 35.0% |
| ! | GATGCTATTTGTCTACTGTT+TGG | - | chr5.2:5585122-5585141 | None:intergenic | 35.0% |
| ! | TAGGACACTATCGAGATTTT+AGG | - | chr5.2:5585170-5585189 | None:intergenic | 35.0% |
| ! | TGACAGAGTTTCTTCACTTT+TGG | - | chr5.2:5584393-5584412 | None:intergenic | 35.0% |
| !! | AAGCTTTGAGTATACGAAGA+TGG | + | chr5.2:5583723-5583742 | MS.gene09700:intron | 35.0% |
| !! | ACACTATCGAGATTTTAGGA+TGG | - | chr5.2:5585166-5585185 | None:intergenic | 35.0% |
| !! | AGGTGACTTGTTATTACATC+TGG | - | chr5.2:5588361-5588380 | None:intergenic | 35.0% |
| !! | CAAGTGTGCTCATTTTAATC+GGG | + | chr5.2:5583612-5583631 | MS.gene09700:intron | 35.0% |
| !! | TTTTACGCAGATACTTGCTA+CGG | + | chr5.2:5586411-5586430 | MS.gene09700:intron | 35.0% |
| !!! | GTATTTTGATGATCGTAGCT+TGG | + | chr5.2:5585680-5585699 | MS.gene09700:CDS | 35.0% |
| AAAACAGACTTAGGCTCAGA+AGG | + | chr5.2:5586036-5586055 | MS.gene09700:intron | 40.0% | |
| AAACTGGCGAGGAAATCAAA+AGG | + | chr5.2:5584631-5584650 | MS.gene09700:intron | 40.0% | |
| AAAGTGATTTAGATCGCAGG+AGG | + | chr5.2:5586524-5586543 | MS.gene09700:CDS | 40.0% | |
| AACTTCTGTGAAGTGTATGG+TGG | + | chr5.2:5587868-5587887 | MS.gene09700:intron | 40.0% | |
| ACAACAACAGGTAGCTGTTA+CGG | + | chr5.2:5586671-5586690 | MS.gene09700:intron | 40.0% | |
| ACAGCTACCTGTTGTTGTAT+TGG | - | chr5.2:5586669-5586688 | None:intergenic | 40.0% | |
| ACGGTTAATTGGTTAACCGT+GGG | + | chr5.2:5583875-5583894 | MS.gene09700:intron | 40.0% | |
| AGAAGTTCCAAACGGTTGAA+AGG | - | chr5.2:5588322-5588341 | None:intergenic | 40.0% | |
| ATCTGTTTCAGCTTACTCTC+TGG | + | chr5.2:5587677-5587696 | MS.gene09700:intron | 40.0% | |
| ATGGCAATGGATCATGAATC+AGG | + | chr5.2:5586602-5586621 | MS.gene09700:intron | 40.0% | |
| CACAAAGTGATTTAGATCGC+AGG | + | chr5.2:5586521-5586540 | MS.gene09700:CDS | 40.0% | |
| CAGTATAGCGAATAGTCGTA+TGG | - | chr5.2:5585403-5585422 | None:intergenic | 40.0% | |
| CCGGGTTGTTCGTATTATTA+CGG | - | chr5.2:5584202-5584221 | None:intergenic | 40.0% | |
| CCGTAATAATACGAACAACC+CGG | + | chr5.2:5584199-5584218 | MS.gene09700:CDS | 40.0% | |
| CGCCATATCACTGAAGATAT+TGG | + | chr5.2:5585831-5585850 | MS.gene09700:CDS | 40.0% | |
| CGTAATAATACGAACAACCC+GGG | + | chr5.2:5584200-5584219 | MS.gene09700:CDS | 40.0% | |
| CGTCATGCAATTTAAGTAGG+GGG | + | chr5.2:5584476-5584495 | MS.gene09700:intron | 40.0% | |
| CTGCGATCTAAATCACTTTG+TGG | - | chr5.2:5586523-5586542 | None:intergenic | 40.0% | |
| GAATCTGCAAGCAAGAATAG+AGG | - | chr5.2:5587542-5587561 | None:intergenic | 40.0% | |
| GCGTCATGCAATTTAAGTAG+GGG | + | chr5.2:5584475-5584494 | MS.gene09700:intron | 40.0% | |
| GCGTTTATAACAACACGTCT+TGG | + | chr5.2:5587740-5587759 | MS.gene09700:intron | 40.0% | |
| GGAGTTAAAGACAAGTTACG+AGG | + | chr5.2:5587259-5587278 | MS.gene09700:CDS | 40.0% | |
| TACGGTTAATTGGTTAACCG+TGG | + | chr5.2:5583874-5583893 | MS.gene09700:intron | 40.0% | |
| TACTCAAACACGCAAAGAAG+CGG | - | chr5.2:5585086-5585105 | None:intergenic | 40.0% | |
| TAGGATGGCTTCGTTTATTG+CGG | - | chr5.2:5585151-5585170 | None:intergenic | 40.0% | |
| TAGTCTTTCCCTCTGTTGTT+TGG | + | chr5.2:5584907-5584926 | MS.gene09700:intron | 40.0% | |
| TCACTAATCGACAAACACCA+AGG | - | chr5.2:5584070-5584089 | None:intergenic | 40.0% | |
| TCATTATGTTGAAACTGGCG+AGG | + | chr5.2:5584620-5584639 | MS.gene09700:intron | 40.0% | |
| TCTCTTTACCTAGTCATGGT+TGG | + | chr5.2:5586765-5586784 | MS.gene09700:intron | 40.0% | |
| TTATATTCGCCATGAGCCTT+GGG | + | chr5.2:5586435-5586454 | MS.gene09700:CDS | 40.0% | |
| TTCGTATTATTACGGATGGG+AGG | - | chr5.2:5584194-5584213 | None:intergenic | 40.0% | |
| TTGTAGTCAATAGCAGCCAT+AGG | + | chr5.2:5584718-5584737 | MS.gene09700:intron | 40.0% | |
| ! | AAATTCTGCCTCTGAGGATA+AGG | - | chr5.2:5584305-5584324 | None:intergenic | 40.0% |
| ! | ATCCTCAGAGGCAGAATTTT+GGG | + | chr5.2:5584306-5584325 | MS.gene09700:CDS | 40.0% |
| ! | ATGGGAGTACACAAAAGGAA+TGG | + | chr5.2:5586460-5586479 | MS.gene09700:CDS | 40.0% |
| ! | TATCCTCAGAGGCAGAATTT+TGG | + | chr5.2:5584305-5584324 | MS.gene09700:CDS | 40.0% |
| ! | TCTGAGCCTAAGTCTGTTTT+AGG | - | chr5.2:5586036-5586055 | None:intergenic | 40.0% |
| ! | TGGCAAGATGTGATTTTCTC+TGG | + | chr5.2:5584160-5584179 | MS.gene09700:intron | 40.0% |
| !! | AACATAATTTGTTGGCAGGG+TGG | + | chr5.2:5588088-5588107 | MS.gene09700:intron | 40.0% |
| !! | ATTGGAGCTGATTTGAACGA+AGG | + | chr5.2:5585849-5585868 | MS.gene09700:CDS | 40.0% |
| !! | GAGGTATTATGCTGGCTTTA+TGG | + | chr5.2:5588133-5588152 | MS.gene09700:CDS | 40.0% |
| AAAAATGAAGGGCTACTGGC+AGG | + | chr5.2:5587837-5587856 | MS.gene09700:CDS | 45.0% | |
| AAAACAAAATTGCGGGAGGG+TGG | + | chr5.2:5583903-5583922 | MS.gene09700:intron | 45.0% | |
| AAATATATGGAACGCCTGCC+AGG | - | chr5.2:5587572-5587591 | None:intergenic | 45.0% | |
| AATCGGGTTACACTTTCGAC+CGG | + | chr5.2:5583628-5583647 | MS.gene09700:intron | 45.0% | |
| AGCAGCTATAGCAATGCCTA+TGG | - | chr5.2:5584737-5584756 | None:intergenic | 45.0% | |
| AGTTCCAAACGGTTGAAAGG+TGG | - | chr5.2:5588319-5588338 | None:intergenic | 45.0% | |
| CAAAGAAGCGGTGTTTCATG+TGG | - | chr5.2:5585074-5585093 | None:intergenic | 45.0% | |
| CAACAACAGGTAGCTGTTAC+GGG | + | chr5.2:5586672-5586691 | MS.gene09700:intron | 45.0% | |
| CAAGGGCAGCATAATGATAG+AGG | + | chr5.2:5584254-5584273 | MS.gene09700:CDS | 45.0% | |
| CAGAGACAAAACGTTCATCG+CGG | - | chr5.2:5584358-5584377 | None:intergenic | 45.0% | |
| CAGCACAAGATCACAGATTG+CGG | - | chr5.2:5587625-5587644 | None:intergenic | 45.0% | |
| CAGCATAATGATAGAGGAGC+TGG | + | chr5.2:5584260-5584279 | MS.gene09700:CDS | 45.0% | |
| CTATAGCAGGCAAGTTCACA+AGG | - | chr5.2:5585639-5585658 | None:intergenic | 45.0% | |
| CTTATATTCGCCATGAGCCT+TGG | + | chr5.2:5586434-5586453 | MS.gene09700:CDS | 45.0% | |
| CTTGCAGATTCAGTCATTCC+TGG | + | chr5.2:5587551-5587570 | MS.gene09700:intron | 45.0% | |
| GACACTATCCAACCATGACT+AGG | - | chr5.2:5586776-5586795 | None:intergenic | 45.0% | |
| GACTTAGGCTCAGAAGGTTA+TGG | + | chr5.2:5586042-5586061 | MS.gene09700:intron | 45.0% | |
| GAGCTTGCAGAAGTTCCAAA+CGG | - | chr5.2:5588330-5588349 | None:intergenic | 45.0% | |
| GCATTTCAGTCCGAACAAGA+CGG | - | chr5.2:5587789-5587808 | None:intergenic | 45.0% | |
| GTACCGCAACAATCTGAACA+AGG | + | chr5.2:5586240-5586259 | MS.gene09700:CDS | 45.0% | |
| GTATGGTGGCAAACCTGTAT+TGG | + | chr5.2:5587882-5587901 | MS.gene09700:intron | 45.0% | |
| TAATCGACAAACACCAAGGC+AGG | - | chr5.2:5584066-5584085 | None:intergenic | 45.0% | |
| TACCCAAAATTCTGCCTCTG+AGG | - | chr5.2:5584311-5584330 | None:intergenic | 45.0% | |
| TAGCTTGGTAAGCGCTAGTT+GGG | + | chr5.2:5585695-5585714 | MS.gene09700:intron | 45.0% | |
| TCATCCTATGCAGTCAATGG+TGG | - | chr5.2:5585463-5585482 | None:intergenic | 45.0% | |
| TCTCAGCACCCATCAAGATA+CGG | - | chr5.2:5587196-5587215 | None:intergenic | 45.0% | |
| TGCTGTGATACGACTACTGA+TGG | + | chr5.2:5587221-5587240 | MS.gene09700:CDS | 45.0% | |
| TTGTGTACTCCCATTTCCCA+AGG | - | chr5.2:5586454-5586473 | None:intergenic | 45.0% | |
| ! | CCATTGACTGCATAGGATGA+CGG | + | chr5.2:5585463-5585482 | MS.gene09700:intron | 45.0% |
| ! | CTATCCACCATTGACTGCAT+AGG | + | chr5.2:5585456-5585475 | MS.gene09700:intron | 45.0% |
| ! | GGGAAATGGGAGTACACAAA+AGG | + | chr5.2:5586455-5586474 | MS.gene09700:CDS | 45.0% |
| !! | CAGAGGCAGAATTTTGGGTA+TGG | + | chr5.2:5584311-5584330 | MS.gene09700:CDS | 45.0% |
| !! | CCTAGGGTGCTCTTTTTGAT+CGG | + | chr5.2:5584010-5584029 | MS.gene09700:intron | 45.0% |
| !! | TATCTTGATGGGTGCTGAGA+TGG | + | chr5.2:5587196-5587215 | MS.gene09700:CDS | 45.0% |
| !! | AAATTGTTAAATAAAAATAT+AGG | - | chr5.2:5587461-5587480 | None:intergenic | 5.0% |
| AAACACCAAAGCACGAGCCT+AGG | - | chr5.2:5583656-5583675 | None:intergenic | 50.0% | |
| AATACGAACAACCCGGGAAG+AGG | + | chr5.2:5584206-5584225 | MS.gene09700:CDS | 50.0% | |
| ACACGTCTTGGCTGTCATAC+AGG | + | chr5.2:5587752-5587771 | MS.gene09700:intron | 50.0% | |
| ACGTGTTAATGCAGATCCGC+TGG | - | chr5.2:5587948-5587967 | None:intergenic | 50.0% | |
| AGACAAAACGTTCATCGCGG+TGG | - | chr5.2:5584355-5584374 | None:intergenic | 50.0% | |
| AGCCACTATAGCGACACCTA+TGG | - | chr5.2:5585030-5585049 | None:intergenic | 50.0% | |
| ATACGAACAACCCGGGAAGA+GGG | + | chr5.2:5584207-5584226 | MS.gene09700:CDS | 50.0% | |
| ATCGGGTTACACTTTCGACC+GGG | + | chr5.2:5583629-5583648 | MS.gene09700:intron | 50.0% | |
| ATGGCCACTCCATCGAAGTA+TGG | - | chr5.2:5585384-5585403 | None:intergenic | 50.0% | |
| CAACGGTCGAGAGATTCCTA+GGG | + | chr5.2:5583994-5584013 | MS.gene09700:intron | 50.0% | |
| CACGTCTTGGCTGTCATACA+GGG | + | chr5.2:5587753-5587772 | MS.gene09700:intron | 50.0% | |
| CACTCCATCGAAGTATGGGA+AGG | - | chr5.2:5585379-5585398 | None:intergenic | 50.0% | |
| CAGATTCAGTCATTCCTGGC+AGG | + | chr5.2:5587555-5587574 | MS.gene09700:intron | 50.0% | |
| CCGTCATCCTATGCAGTCAA+TGG | - | chr5.2:5585466-5585485 | None:intergenic | 50.0% | |
| CGAAGATGGAAGACTGTGTC+TGG | + | chr5.2:5583737-5583756 | MS.gene09700:intron | 50.0% | |
| CTGTCATACAGGGATGATGC+AGG | + | chr5.2:5587763-5587782 | MS.gene09700:intron | 50.0% | |
| CTTCCCATACTTCGATGGAG+TGG | + | chr5.2:5585377-5585396 | MS.gene09700:intron | 50.0% | |
| GAAGATCCCAGAAGAGCAGA+CGG | + | chr5.2:5587101-5587120 | MS.gene09700:CDS | 50.0% | |
| GTAGCTTGGTAAGCGCTAGT+TGG | + | chr5.2:5585694-5585713 | MS.gene09700:intron | 50.0% | |
| TCAACGGTCGAGAGATTCCT+AGG | + | chr5.2:5583993-5584012 | MS.gene09700:intron | 50.0% | |
| TGCTATAGTCGTGCAGAAGG+CGG | + | chr5.2:5585651-5585670 | MS.gene09700:CDS | 50.0% | |
| TGGCCACTCCATCGAAGTAT+GGG | - | chr5.2:5585383-5585402 | None:intergenic | 50.0% | |
| ! | ATGATGCAGGCCGTCTTGTT+CGG | + | chr5.2:5587776-5587795 | MS.gene09700:CDS | 50.0% |
| ! | TGGTGGATAGCAGAGCAAAG+TGG | - | chr5.2:5585446-5585465 | None:intergenic | 50.0% |
| ! | TTGCGGACGAGGTATTATGC+TGG | + | chr5.2:5588125-5588144 | MS.gene09700:CDS | 50.0% |
| ! | TTGGCCTTCCCATACTTCGA+TGG | + | chr5.2:5585372-5585391 | MS.gene09700:intron | 50.0% |
| !! | AGCCATAGGTGTCGCTATAG+TGG | + | chr5.2:5585025-5585044 | MS.gene09700:intron | 50.0% |
| !! | CCGATCAAAAAGAGCACCCT+AGG | - | chr5.2:5584013-5584032 | None:intergenic | 50.0% |
| !! | TGCTCTTCTGGGATCTTCAG+TGG | - | chr5.2:5587099-5587118 | None:intergenic | 50.0% |
| !! | TTCTGGGATCTTCAGTGGCA+AGG | - | chr5.2:5587094-5587113 | None:intergenic | 50.0% |
| CGCCATGAGCCTTGGGAAAT+GGG | + | chr5.2:5586442-5586461 | MS.gene09700:CDS | 55.0% | |
| CTATAGTCGTGCAGAAGGCG+GGG | + | chr5.2:5585653-5585672 | MS.gene09700:CDS | 55.0% | |
| CTCCCATTTCCCAAGGCTCA+TGG | - | chr5.2:5586447-5586466 | None:intergenic | 55.0% | |
| GACGTGGTCGTTGGCAACAA+GGG | + | chr5.2:5584237-5584256 | MS.gene09700:CDS | 55.0% | |
| GCCTGCTATAGTCGTGCAGA+AGG | + | chr5.2:5585648-5585667 | MS.gene09700:CDS | 55.0% | |
| GCCTTCTGCACGACTATAGC+AGG | - | chr5.2:5585652-5585671 | None:intergenic | 55.0% | |
| GCTATAGTCGTGCAGAAGGC+GGG | + | chr5.2:5585652-5585671 | MS.gene09700:CDS | 55.0% | |
| GGGGCTCACCGTATCTTGAT+GGG | + | chr5.2:5587185-5587204 | MS.gene09700:CDS | 55.0% | |
| GTCCTGGACCTTATCCTCAG+AGG | + | chr5.2:5584294-5584313 | MS.gene09700:CDS | 55.0% | |
| TACACTTTCGACCGGGTCCT+AGG | + | chr5.2:5583636-5583655 | MS.gene09700:intron | 55.0% | |
| TACGAACAACCCGGGAAGAG+GGG | + | chr5.2:5584208-5584227 | MS.gene09700:CDS | 55.0% | |
| TCGCCATGAGCCTTGGGAAA+TGG | + | chr5.2:5586441-5586460 | MS.gene09700:CDS | 55.0% | |
| TGAGGATAAGGTCCAGGACG+CGG | - | chr5.2:5584293-5584312 | None:intergenic | 55.0% | |
| ! | GAGTATCGTGTAGCGCCTAG+AGG | - | chr5.2:5584771-5584790 | None:intergenic | 55.0% |
| ! | GCTATAGCTGCTTTGCGCTG+TGG | + | chr5.2:5584745-5584764 | MS.gene09700:intron | 55.0% |
| ! | TGCCTCTGAGGATAAGGTCC+AGG | - | chr5.2:5584299-5584318 | None:intergenic | 55.0% |
| ACGAACAACCCGGGAAGAGG+GGG | + | chr5.2:5584209-5584228 | MS.gene09700:CDS | 60.0% | |
| ATACCTCGTCCGCAAACGCC+AGG | - | chr5.2:5588120-5588139 | None:intergenic | 60.0% | |
| CAAAGCACGAGCCTAGGACC+CGG | - | chr5.2:5583650-5583669 | None:intergenic | 60.0% | |
| CGCGCCACCTTTCAACCGTT+TGG | + | chr5.2:5588312-5588331 | MS.gene09700:CDS | 60.0% | |
| GGACGTGGTCGTTGGCAACA+AGG | + | chr5.2:5584236-5584255 | MS.gene09700:CDS | 60.0% | |
| GGCTCTCCGTCTGCTCTTCT+GGG | - | chr5.2:5587110-5587129 | None:intergenic | 60.0% | |
| GGGGGCTCACCGTATCTTGA+TGG | + | chr5.2:5587184-5587203 | MS.gene09700:CDS | 60.0% | |
| GTGTTTCATGTGGCGCCTGG+AGG | - | chr5.2:5585064-5585083 | None:intergenic | 60.0% | |
| TAGGCGCTTGTGTCCTGCCT+TGG | + | chr5.2:5584050-5584069 | MS.gene09700:intron | 60.0% | |
| TGCTTTGCGCTGTGGCCTCT+AGG | + | chr5.2:5584753-5584772 | MS.gene09700:intron | 60.0% | |
| TGGAGTCTGCCTGGCGTTTG+CGG | + | chr5.2:5588108-5588127 | MS.gene09700:CDS | 60.0% | |
| AACAACCCGGGAAGAGGGGG+TGG | + | chr5.2:5584212-5584231 | MS.gene09700:CDS | 65.0% | |
| CGGCTCTCCGTCTGCTCTTC+TGG | - | chr5.2:5587111-5587130 | None:intergenic | 65.0% | |
| CGGGTCCTAGGCTCGTGCTT+TGG | + | chr5.2:5583648-5583667 | MS.gene09700:intron | 65.0% | |
| GCGGTGTTTCATGTGGCGCC+TGG | - | chr5.2:5585067-5585086 | None:intergenic | 65.0% | |
| GCTGGCATTCTTCCGCGTCC+TGG | + | chr5.2:5584278-5584297 | MS.gene09700:CDS | 65.0% | |
| GGCTTTGCGCTGTAGCCTCC+AGG | + | chr5.2:5585046-5585065 | MS.gene09700:intron | 65.0% | |
| TTGGCAGGGTGGAGTCTGCC+TGG | + | chr5.2:5588099-5588118 | MS.gene09700:intron | 65.0% | |
| AACCCGGGAAGAGGGGGTGG+TGG | + | chr5.2:5584215-5584234 | MS.gene09700:CDS | 70.0% | |
| CGTCCACCACCCCCTCTTCC+CGG | - | chr5.2:5584221-5584240 | None:intergenic | 70.0% | |
| CTGCCTGGCGTTTGCGGACG+AGG | + | chr5.2:5588114-5588133 | MS.gene09700:CDS | 70.0% | |
| GTCCACCACCCCCTCTTCCC+GGG | - | chr5.2:5584220-5584239 | None:intergenic | 70.0% | |
| !! | GGAAGAGGGGGTGGTGGACG+TGG | + | chr5.2:5584221-5584240 | MS.gene09700:CDS | 70.0% |
| !! | GGGGTGGTGGACGTGGTCGT+TGG | + | chr5.2:5584228-5584247 | MS.gene09700:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 5583506 | 5588393 | 5583506 | ID=MS.gene09700 |
| chr5.2 | mRNA | 5583506 | 5588393 | 5583506 | ID=MS.gene09700.t1;Parent=MS.gene09700 |
| chr5.2 | exon | 5583506 | 5583509 | 5583506 | ID=MS.gene09700.t1.exon1;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5583506 | 5583509 | 5583506 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5584186 | 5584436 | 5584186 | ID=MS.gene09700.t1.exon2;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5584186 | 5584436 | 5584186 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5585636 | 5585701 | 5585636 | ID=MS.gene09700.t1.exon3;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5585636 | 5585701 | 5585636 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5585819 | 5585897 | 5585819 | ID=MS.gene09700.t1.exon4;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5585819 | 5585897 | 5585819 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5586043 | 5586122 | 5586043 | ID=MS.gene09700.t1.exon5;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5586043 | 5586122 | 5586043 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5586238 | 5586261 | 5586238 | ID=MS.gene09700.t1.exon6;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5586238 | 5586261 | 5586238 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5586421 | 5586545 | 5586421 | ID=MS.gene09700.t1.exon7;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5586421 | 5586545 | 5586421 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5587064 | 5587280 | 5587064 | ID=MS.gene09700.t1.exon8;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5587064 | 5587280 | 5587064 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5587396 | 5587449 | 5587396 | ID=MS.gene09700.t1.exon9;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5587396 | 5587449 | 5587396 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5587558 | 5587604 | 5587558 | ID=MS.gene09700.t1.exon10;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5587558 | 5587604 | 5587558 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5587774 | 5587858 | 5587774 | ID=MS.gene09700.t1.exon11;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5587774 | 5587858 | 5587774 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5588106 | 5588169 | 5588106 | ID=MS.gene09700.t1.exon12;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5588106 | 5588169 | 5588106 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| chr5.2 | exon | 5588290 | 5588393 | 5588290 | ID=MS.gene09700.t1.exon13;Parent=MS.gene09700.t1 |
| chr5.2 | CDS | 5588290 | 5588393 | 5588290 | ID=cds.MS.gene09700.t1;Parent=MS.gene09700.t1 |
| Gene Sequence |
| Protein sequence |
