Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09815.t1 | XP_003625549.1 | 93 | 868 | 60 | 1 | 1 | 868 | 1 | 867 | 0.00E+00 | 1578.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09815.t1 | Q9SF47 | 51.8 | 926 | 366 | 16 | 1 | 868 | 1 | 904 | 6.9e-244 | 845.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09815.t1 | G7L0Q2 | 93.0 | 868 | 60 | 1 | 1 | 868 | 1 | 867 | 0.0e+00 | 1578.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012989 | MS.gene09815 | PPI |
| MS.gene054635 | MS.gene09815 | PPI |
| MS.gene48495 | MS.gene09815 | PPI |
| MS.gene38722 | MS.gene09815 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09815.t1 | MTR_7g100370 | 96.313 | 868 | 31 | 1 | 1 | 868 | 1 | 867 | 0.0 | 1706 |
| MS.gene09815.t1 | MTR_1g067380 | 61.047 | 955 | 255 | 21 | 1 | 868 | 1 | 925 | 0.0 | 1056 |
| MS.gene09815.t1 | MTR_3g101590 | 66.561 | 314 | 87 | 3 | 559 | 863 | 523 | 827 | 3.01e-139 | 434 |
| MS.gene09815.t1 | MTR_3g101590 | 70.526 | 95 | 28 | 0 | 1 | 95 | 1 | 95 | 1.20e-39 | 158 |
| MS.gene09815.t1 | MTR_1g019740 | 74.219 | 256 | 64 | 2 | 609 | 863 | 121 | 375 | 2.05e-134 | 406 |
| MS.gene09815.t1 | MTR_1g019740 | 74.219 | 256 | 64 | 2 | 609 | 863 | 261 | 515 | 2.62e-132 | 405 |
| MS.gene09815.t1 | MTR_1g019740 | 58.242 | 91 | 35 | 2 | 1 | 88 | 1 | 91 | 8.05e-26 | 113 |
| MS.gene09815.t1 | MTR_3g101590 | 65.044 | 226 | 61 | 3 | 559 | 775 | 523 | 739 | 8.23e-87 | 293 |
| MS.gene09815.t1 | MTR_3g101590 | 70.526 | 95 | 28 | 0 | 1 | 95 | 1 | 95 | 6.03e-40 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09815.t1 | AT3G09560 | 53.433 | 932 | 342 | 21 | 1 | 868 | 1 | 904 | 0.0 | 894 |
| MS.gene09815.t1 | AT3G09560 | 53.433 | 932 | 342 | 21 | 1 | 868 | 1 | 904 | 0.0 | 894 |
| MS.gene09815.t1 | AT3G09560 | 53.433 | 932 | 342 | 21 | 1 | 868 | 1 | 904 | 0.0 | 894 |
| MS.gene09815.t1 | AT3G09560 | 53.433 | 932 | 342 | 21 | 1 | 868 | 1 | 904 | 0.0 | 894 |
| MS.gene09815.t1 | AT5G42870 | 58.596 | 413 | 141 | 7 | 461 | 867 | 541 | 929 | 7.90e-161 | 493 |
| MS.gene09815.t1 | AT5G42870 | 60.215 | 93 | 37 | 0 | 1 | 93 | 1 | 93 | 1.99e-33 | 139 |
| MS.gene09815.t1 | AT5G42870 | 57.627 | 413 | 140 | 8 | 461 | 867 | 541 | 924 | 3.49e-155 | 479 |
| MS.gene09815.t1 | AT5G42870 | 60.215 | 93 | 37 | 0 | 1 | 93 | 1 | 93 | 1.78e-33 | 139 |
| MS.gene09815.t1 | AT5G42870 | 57.967 | 364 | 123 | 7 | 461 | 818 | 541 | 880 | 5.17e-134 | 422 |
| MS.gene09815.t1 | AT5G42870 | 60.215 | 93 | 37 | 0 | 1 | 93 | 1 | 93 | 1.52e-33 | 139 |
Find 214 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTTCAGATCTGATGTTT+TGG | 0.192008 | 7.1:+7734125 | MS.gene09815:intron |
| ACTTCAACTCTTGGAATTAT+TGG | 0.208357 | 7.1:+7736101 | MS.gene09815:CDS |
| TTGATGCTCATATATATTTA+TGG | 0.222189 | 7.1:+7733381 | MS.gene09815:CDS |
| ATTAAACAATTTAGAAATAT+TGG | 0.228590 | 7.1:+7732308 | MS.gene09815:CDS |
| ATGAATGTGGTGGGAAAATT+TGG | 0.229388 | 7.1:+7731219 | MS.gene09815:CDS |
| TTTGTTTAAATACCTGTTTC+AGG | 0.232511 | 7.1:-7735206 | None:intergenic |
| CATATGTATCTTGATAATTC+CGG | 0.248335 | 7.1:+7731444 | MS.gene09815:CDS |
| TCGGCTGATTTGTCAGAATA+TGG | 0.264818 | 7.1:+7731744 | MS.gene09815:CDS |
| GAACTAAGTTACAGTAAAAT+AGG | 0.277495 | 7.1:+7735749 | MS.gene09815:CDS |
| AGTTTCTCTACGAGGGTTCT+AGG | 0.286566 | 7.1:+7733250 | MS.gene09815:CDS |
| AGTCCTTACTCAAACCAAAA+TGG | 0.312761 | 7.1:-7732580 | None:intergenic |
| TCTCAAAGATGGTCAAAATA+TGG | 0.321607 | 7.1:+7733219 | MS.gene09815:CDS |
| CAACTAAATAGATACCTTAA+TGG | 0.323620 | 7.1:-7734211 | None:intergenic |
| TTGTGAAGATAAATGTTAAT+GGG | 0.325693 | 7.1:+7731406 | MS.gene09815:CDS |
| AGTGTTGAAATTGATATTAC+TGG | 0.332390 | 7.1:+7731570 | MS.gene09815:CDS |
| AAGGCCGCCCCTCTTGTTCT+TGG | 0.341180 | 7.1:+7732872 | MS.gene09815:CDS |
| TGCCTTTAGTTGGAAAAGAT+TGG | 0.344724 | 7.1:+7734157 | MS.gene09815:CDS |
| CTTGCTCAGCAGGATGATTA+TGG | 0.349602 | 7.1:+7732188 | MS.gene09815:CDS |
| AACCCATTCTACGCGGGGTT+TGG | 0.350697 | 7.1:+7735710 | MS.gene09815:CDS |
| GATTCCGAATCTGATTTGTT+TGG | 0.352962 | 7.1:+7733097 | MS.gene09815:CDS |
| GATCATAGCGTATCTGATTC+GGG | 0.353087 | 7.1:+7731603 | MS.gene09815:CDS |
| GATATCGGTAATAGTGCTTC+CGG | 0.358681 | 7.1:+7732038 | MS.gene09815:CDS |
| GAAATAACAACAGGTCCTTT+TGG | 0.363480 | 7.1:-7735375 | None:intergenic |
| TTAAAAGTTCCTGACCTTCT+CGG | 0.364505 | 7.1:-7735425 | None:intergenic |
| ATATGTATCTTGATAATTCC+GGG | 0.366297 | 7.1:+7731445 | MS.gene09815:CDS |
| ATTTATCTTCACAATCTTCT+CGG | 0.372459 | 7.1:-7731397 | None:intergenic |
| GGCAATGAGGAGTTTAGTTC+TGG | 0.375234 | 7.1:+7731936 | MS.gene09815:CDS |
| ATTGTGAAGATAAATGTTAA+TGG | 0.378629 | 7.1:+7731405 | MS.gene09815:CDS |
| TGATCATAGCGTATCTGATT+CGG | 0.384025 | 7.1:+7731602 | MS.gene09815:CDS |
| TGATGCTATCATCTCATTAG+AGG | 0.387912 | 7.1:-7733191 | None:intergenic |
| GTGGAAGTTGACACTGGTTC+TGG | 0.389318 | 7.1:+7732425 | MS.gene09815:CDS |
| CCCACAAGAATTGTATCTTC+AGG | 0.392472 | 7.1:-7732929 | None:intergenic |
| ACATAGAACTAATCAATATC+TGG | 0.393486 | 7.1:-7736136 | None:intergenic |
| ATTTGTCACACGGAGGAAAC+TGG | 0.394153 | 7.1:+7732098 | MS.gene09815:CDS |
| GATATCAGAGCTATAAATAC+TGG | 0.396300 | 7.1:-7732021 | None:intergenic |
| GAATTTGATATCTCACTTTG+TGG | 0.396349 | 7.1:+7732695 | MS.gene09815:intron |
| GTTGGCTCTAATTCTGAGAT+AGG | 0.398990 | 7.1:-7731843 | None:intergenic |
| GTTTCCTCCGTGTGACAAAT+AGG | 0.403271 | 7.1:-7732095 | None:intergenic |
| GAGTTAGTAACACCTTCAAC+AGG | 0.404417 | 7.1:-7731525 | None:intergenic |
| GTAAGGTTTGGTAAATTTCA+AGG | 0.404862 | 7.1:+7731360 | MS.gene09815:CDS |
| TTCTAATCCGGAGGTGATCT+TGG | 0.405144 | 7.1:+7731791 | MS.gene09815:CDS |
| TCCTACGTCTTTGCTTGAAC+AGG | 0.407811 | 7.1:+7735984 | MS.gene09815:CDS |
| ACTTTGTGGTCACGAACTTA+AGG | 0.409783 | 7.1:+7732709 | MS.gene09815:CDS |
| CACCACCAAAAGGGTGAAAA+GGG | 0.410706 | 7.1:-7731278 | None:intergenic |
| TTGCCAAACCCCGCGTAGAA+TGG | 0.414444 | 7.1:-7735713 | None:intergenic |
| ATATCGGTAATAGTGCTTCC+GGG | 0.417611 | 7.1:+7732039 | MS.gene09815:CDS |
| ATTTGGAACCTTGATAACTA+AGG | 0.420387 | 7.1:+7731236 | MS.gene09815:CDS |
| AGAGAATGTTGTGGACTTGC+AGG | 0.425386 | 7.1:+7731767 | MS.gene09815:CDS |
| TCACGAACTTAAGGCGGGTA+TGG | 0.425429 | 7.1:+7732718 | MS.gene09815:CDS |
| ATTGTATCTTCAGGGGCAAC+AGG | 0.429281 | 7.1:-7732920 | None:intergenic |
| AGCTGCATCATGCATGAATT+CGG | 0.430128 | 7.1:+7732130 | MS.gene09815:CDS |
| GAGTGCCCGTGCTATTGTCC+AGG | 0.431287 | 7.1:+7735155 | MS.gene09815:CDS |
| CTTAAATGAACTTGCTCAGC+AGG | 0.432746 | 7.1:+7732178 | MS.gene09815:CDS |
| GGCAGGAGGACTTCAACTCT+TGG | 0.432981 | 7.1:+7736092 | MS.gene09815:intron |
| CTCATATATATTTATGGAAG+TGG | 0.433128 | 7.1:+7733387 | MS.gene09815:CDS |
| GCACCACCAAAAGGGTGAAA+AGG | 0.435072 | 7.1:-7731279 | None:intergenic |
| TTCTTGTGGGTCAAGATGAT+AGG | 0.435396 | 7.1:+7732942 | MS.gene09815:CDS |
| CCTCAATTTCACTTGGGACC+AGG | 0.436900 | 7.1:+7731891 | MS.gene09815:CDS |
| CGAAGGTTGCCAAATAGAAA+AGG | 0.437602 | 7.1:+7732070 | MS.gene09815:CDS |
| GGGCAGTTCATGCCTTTAGT+TGG | 0.438033 | 7.1:+7734147 | MS.gene09815:CDS |
| CTCCTCGCAAGCAATTTGTT+AGG | 0.441589 | 7.1:+7733158 | MS.gene09815:CDS |
| GTGATCTTGGTTAGCGTTGA+CGG | 0.444536 | 7.1:+7731804 | MS.gene09815:CDS |
| TTCCTGACCTTCTCGGTAAA+GGG | 0.446468 | 7.1:-7735418 | None:intergenic |
| ACAAGATGAAAGGTCCTCAT+TGG | 0.448766 | 7.1:+7732217 | MS.gene09815:CDS |
| CCTGTTGTTATTTCACCTGA+TGG | 0.449780 | 7.1:+7735384 | MS.gene09815:CDS |
| TGCCAAACCCCGCGTAGAAT+GGG | 0.451152 | 7.1:-7735712 | None:intergenic |
| GTTCCTGACCTTCTCGGTAA+AGG | 0.453457 | 7.1:-7735419 | None:intergenic |
| GGAGCACGCCTTGGTATGTA+AGG | 0.453862 | 7.1:+7731343 | MS.gene09815:CDS |
| TCAGCCGAATCTTCAATTGT+TGG | 0.454790 | 7.1:-7731729 | None:intergenic |
| ATAAACACCCTTAGTTATCA+AGG | 0.455833 | 7.1:-7731244 | None:intergenic |
| GACTCAAATGTCCCTGTTGA+AGG | 0.461533 | 7.1:+7731513 | MS.gene09815:CDS |
| AGTATTTATAGCTCTGATAT+CGG | 0.466723 | 7.1:+7732023 | MS.gene09815:CDS |
| GGAAAAGATTGGAACCAGAC+TGG | 0.467033 | 7.1:+7734168 | MS.gene09815:CDS |
| ACTGGTTCTGGCATTCGTTC+CGG | 0.467940 | 7.1:+7732437 | MS.gene09815:CDS |
| ACGCCTTGGTATGTAAGGTT+TGG | 0.469262 | 7.1:+7731348 | MS.gene09815:CDS |
| GTGTTGCTGATTATGTTAGT+AGG | 0.469363 | 7.1:+7731970 | MS.gene09815:CDS |
| TCAACCAACAATTGAAGATT+CGG | 0.477254 | 7.1:+7731725 | MS.gene09815:CDS |
| GGACTTGCAGGGTTCTAATC+CGG | 0.477849 | 7.1:+7731779 | MS.gene09815:CDS |
| AAGTCCAGCGATGATAATCC+TGG | 0.480068 | 7.1:+7732968 | MS.gene09815:CDS |
| TTGGCTCTAATTCTGAGATA+GGG | 0.481968 | 7.1:-7731842 | None:intergenic |
| CCACAAGAATTGTATCTTCA+GGG | 0.482375 | 7.1:-7732928 | None:intergenic |
| CTATTTGGCAACCTTCGAGC+TGG | 0.483317 | 7.1:-7732064 | None:intergenic |
| ACATCAACAGCACCACCAAA+AGG | 0.484992 | 7.1:-7731288 | None:intergenic |
| CACGAACTTAAGGCGGGTAT+GGG | 0.485013 | 7.1:+7732719 | MS.gene09815:CDS |
| GCAACCTTCGAGCTGGACCC+CGG | 0.485525 | 7.1:-7732057 | None:intergenic |
| ACATCAGCTGTTGAAGCATC+CGG | 0.487451 | 7.1:-7731993 | None:intergenic |
| GAAAAGATTGGAACCAGACT+GGG | 0.489336 | 7.1:+7734169 | MS.gene09815:CDS |
| AGAGCCAAACAAATCAGATT+CGG | 0.494261 | 7.1:-7733101 | None:intergenic |
| CCCTGAAGATACAATTCTTG+TGG | 0.495334 | 7.1:+7732928 | MS.gene09815:CDS |
| CGTCCAGACGAAGATGGTCC+AGG | 0.496672 | 7.1:-7732986 | None:intergenic |
| CGCCCCTCTTGTTCTTGGAG+TGG | 0.499616 | 7.1:+7732877 | MS.gene09815:CDS |
| AATATTTATCATTAACCCTA+AGG | 0.500228 | 7.1:+7735787 | MS.gene09815:CDS |
| AATCCTGGACCATCTTCGTC+TGG | 0.500733 | 7.1:+7732983 | MS.gene09815:CDS |
| GAGTTATCTACCATGGGAAA+AGG | 0.503668 | 7.1:+7732853 | MS.gene09815:CDS |
| ATTTAAAATCAGAATTTCAA+GGG | 0.506367 | 7.1:+7732384 | MS.gene09815:CDS |
| AGTTCCTGGTTATATAAGCC+TGG | 0.510579 | 7.1:-7735173 | None:intergenic |
| GAGGGTTCTAGGAACACAAC+AGG | 0.510904 | 7.1:+7733261 | MS.gene09815:CDS |
| CCATCAGGTGAAATAACAAC+AGG | 0.512658 | 7.1:-7735384 | None:intergenic |
| CCTGGTCCCAAGTGAAATTG+AGG | 0.512878 | 7.1:-7731891 | None:intergenic |
| CCTGAAGATACAATTCTTGT+GGG | 0.514825 | 7.1:+7732929 | MS.gene09815:CDS |
| AATTTAAAATCAGAATTTCA+AGG | 0.515613 | 7.1:+7732383 | MS.gene09815:CDS |
| AAAGCCTTGCCACCCCAGTC+TGG | 0.517161 | 7.1:-7734182 | None:intergenic |
| ATTGTTGTTCAGCAACAAGA+TGG | 0.518652 | 7.1:+7731312 | MS.gene09815:CDS |
| AGGGACGGAAATAATCCATC+AGG | 0.519561 | 7.1:-7735399 | None:intergenic |
| TAGAATGGGTTATAATCAGA+AGG | 0.527886 | 7.1:-7735698 | None:intergenic |
| GTTGAGCCATCTCCAACCTC+AGG | 0.531698 | 7.1:+7733124 | MS.gene09815:CDS |
| ACAAATTCCTCAATTTCACT+TGG | 0.532985 | 7.1:+7731884 | MS.gene09815:CDS |
| TGAAGAAGTAGCACCACTGA+TGG | 0.536057 | 7.1:-7732342 | None:intergenic |
| ATTGTAATTTCAGATGTGGA+TGG | 0.540092 | 7.1:+7733419 | MS.gene09815:CDS |
| TTTCACTTGGGACCAGGTGA+AGG | 0.540389 | 7.1:+7731897 | MS.gene09815:CDS |
| TTTGGAACCTTGATAACTAA+GGG | 0.543072 | 7.1:+7731237 | MS.gene09815:CDS |
| GACTCAAGCCTACCTGAGGT+TGG | 0.546268 | 7.1:-7733136 | None:intergenic |
| CCCTCTTGTTCTTGGAGTGG+CGG | 0.548536 | 7.1:+7732880 | MS.gene09815:CDS |
| CTGGACGTAGGTGGAGACTC+TGG | 0.548685 | 7.1:+7733002 | MS.gene09815:CDS |
| AAGACAGCTGAGCACAATAG+TGG | 0.548705 | 7.1:+7733046 | MS.gene09815:CDS |
| AGCCTACCTGAGGTTGGAGA+TGG | 0.549317 | 7.1:-7733130 | None:intergenic |
| TTTCCGTCCCTTTACCGAGA+AGG | 0.550428 | 7.1:+7735411 | MS.gene09815:CDS |
| ATGGCAATTTACAAGATGAA+AGG | 0.551334 | 7.1:+7732207 | MS.gene09815:CDS |
| TGGTCCAGGATTATCATCGC+TGG | 0.553435 | 7.1:-7732972 | None:intergenic |
| CAAATTCCTCAATTTCACTT+GGG | 0.554755 | 7.1:+7731885 | MS.gene09815:CDS |
| CATCAACAGCACCACCAAAA+GGG | 0.556201 | 7.1:-7731287 | None:intergenic |
| TTTGCCAGAACTTCAAAAGG+TGG | 0.556741 | 7.1:+7731662 | MS.gene09815:CDS |
| GAAGGTTGCCAAATAGAAAA+GGG | 0.559450 | 7.1:+7732071 | MS.gene09815:CDS |
| TGCTGATTATGTTAGTAGGC+CGG | 0.561183 | 7.1:+7731974 | MS.gene09815:CDS |
| CCATTCCACATCATTCGTAC+CGG | 0.561582 | 7.1:-7732456 | None:intergenic |
| AACATTCAGTTTCTCTACGA+GGG | 0.564099 | 7.1:+7733243 | MS.gene09815:CDS |
| GGAACCAGACTGGGGTGGCA+AGG | 0.569774 | 7.1:+7734178 | MS.gene09815:CDS |
| GCATCATTGAATCTCAAAGA+TGG | 0.573195 | 7.1:+7733208 | MS.gene09815:CDS |
| GTCCTAACAAATTGCTTGCG+AGG | 0.573977 | 7.1:-7733160 | None:intergenic |
| GCTTCCGGGGTCCAGCTCGA+AGG | 0.575480 | 7.1:+7732053 | MS.gene09815:CDS |
| ACTAATAATTTCAAGTACAG+TGG | 0.575677 | 7.1:-7732501 | None:intergenic |
| TTCACTTGGGACCAGGTGAA+GGG | 0.578350 | 7.1:+7731898 | MS.gene09815:CDS |
| ATAAAATGTCCGACCAACAT+CGG | 0.579316 | 7.1:-7731688 | None:intergenic |
| ACGCTAACCAAGATCACCTC+CGG | 0.579858 | 7.1:-7731798 | None:intergenic |
| GATGCTATCATCTCATTAGA+GGG | 0.581965 | 7.1:-7733190 | None:intergenic |
| TCATTGGAAGTTGCTGTCTG+AGG | 0.582855 | 7.1:-7732545 | None:intergenic |
| CAAAAGGTGGAATCCGATGT+TGG | 0.583418 | 7.1:+7731675 | MS.gene09815:CDS |
| TCTGAGTTTACTTCTGAAGA+CGG | 0.583454 | 7.1:+7731546 | MS.gene09815:CDS |
| CAGAGAGAGTTATCTACCAT+GGG | 0.583701 | 7.1:+7732847 | MS.gene09815:CDS |
| AAATTTCAAGGTGTTCTCAA+AGG | 0.584146 | 7.1:+7731372 | MS.gene09815:CDS |
| GGTTGATAAAGCTGCATCAG+TGG | 0.586179 | 7.1:+7732406 | MS.gene09815:CDS |
| TAGAAATCAGTCCCTTCACC+TGG | 0.588186 | 7.1:-7731909 | None:intergenic |
| AAGAATTGTAATTTCAGATG+TGG | 0.588816 | 7.1:+7733415 | MS.gene09815:CDS |
| CCGGTACGAATGATGTGGAA+TGG | 0.589277 | 7.1:+7732456 | MS.gene09815:CDS |
| TGTTCAAGCAAAGACGTAGG+AGG | 0.592284 | 7.1:-7735982 | None:intergenic |
| GATTATAACCCATTCTACGC+GGG | 0.593689 | 7.1:+7735704 | MS.gene09815:CDS |
| TGGCTCTAATTCTGAGATAG+GGG | 0.597023 | 7.1:-7731841 | None:intergenic |
| TCAGAGAGAGTTATCTACCA+TGG | 0.597194 | 7.1:+7732846 | MS.gene09815:CDS |
| CCGCCACTCCAAGAACAAGA+GGG | 0.598140 | 7.1:-7732880 | None:intergenic |
| CAGACAGCAACTTCCAATGA+GGG | 0.598692 | 7.1:+7732548 | MS.gene09815:CDS |
| TGTACTTGAAATTATTAGTG+AGG | 0.600231 | 7.1:+7732505 | MS.gene09815:CDS |
| TATAAGCCTGGACAATAGCA+CGG | 0.602894 | 7.1:-7735161 | None:intergenic |
| CACCTACGTCCAGACGAAGA+TGG | 0.604562 | 7.1:-7732992 | None:intergenic |
| GCCGCCACTCCAAGAACAAG+AGG | 0.605405 | 7.1:-7732881 | None:intergenic |
| GAAGAAGTAGCACCACTGAT+GGG | 0.605725 | 7.1:-7732341 | None:intergenic |
| TTTAAAATCAGAATTTCAAG+GGG | 0.607929 | 7.1:+7732385 | MS.gene09815:CDS |
| GAGAATGTTGTGGACTTGCA+GGG | 0.608699 | 7.1:+7731768 | MS.gene09815:CDS |
| AGTAAAATAGGAATTCCAAA+GGG | 0.609251 | 7.1:+7735761 | MS.gene09815:CDS |
| TGTGGTCACGAACTTAAGGC+GGG | 0.610181 | 7.1:+7732713 | MS.gene09815:CDS |
| CAGTAAAATAGGAATTCCAA+AGG | 0.610652 | 7.1:+7735760 | MS.gene09815:CDS |
| GTTCAAGATTGCTTGTCTAG+AGG | 0.613173 | 7.1:+7735549 | MS.gene09815:CDS |
| TTACCAAACCTTACATACCA+AGG | 0.615393 | 7.1:-7731351 | None:intergenic |
| AGGTGGAATCCGATGTTGGT+CGG | 0.615446 | 7.1:+7731679 | MS.gene09815:CDS |
| TTGTGGTCACGAACTTAAGG+CGG | 0.615928 | 7.1:+7732712 | MS.gene09815:CDS |
| ATAAGCCTGGACAATAGCAC+GGG | 0.616334 | 7.1:-7735160 | None:intergenic |
| TCAGAGCTATAAATACTGGA+TGG | 0.617656 | 7.1:-7732017 | None:intergenic |
| CACTCCAAGAACAAGAGGGG+CGG | 0.618301 | 7.1:-7732876 | None:intergenic |
| TGTGAAGATAAATGTTAATG+GGG | 0.619954 | 7.1:+7731407 | MS.gene09815:CDS |
| TCGTTCCGGTACGAATGATG+TGG | 0.621957 | 7.1:+7732451 | MS.gene09815:CDS |
| AACTAATCAATATCTGGCAT+AGG | 0.627013 | 7.1:-7736130 | None:intergenic |
| CAAGCAATCTTGAACTCATG+AGG | 0.627073 | 7.1:-7735541 | None:intergenic |
| CGCCACTCCAAGAACAAGAG+GGG | 0.627600 | 7.1:-7732879 | None:intergenic |
| CATCTTCGTCTGGACGTAGG+TGG | 0.627651 | 7.1:+7732993 | MS.gene09815:CDS |
| AAAGAAAGAATGAATGTGGT+GGG | 0.628462 | 7.1:+7731210 | None:intergenic |
| GCATCAGTGGAAGTTGACAC+TGG | 0.628672 | 7.1:+7732419 | MS.gene09815:CDS |
| TGACCTTCTCGGTAAAGGGA+CGG | 0.631465 | 7.1:-7735414 | None:intergenic |
| TCAGACAGCAACTTCCAATG+AGG | 0.632178 | 7.1:+7732547 | MS.gene09815:CDS |
| TTGTCCAGGCTTATATAACC+AGG | 0.632877 | 7.1:+7735169 | MS.gene09815:CDS |
| ATCATAGCGTATCTGATTCG+GGG | 0.633177 | 7.1:+7731604 | MS.gene09815:CDS |
| GACAGCAACTTCCAATGAGG+GGG | 0.633635 | 7.1:+7732550 | MS.gene09815:CDS |
| TATCGGTAATAGTGCTTCCG+GGG | 0.633679 | 7.1:+7732040 | MS.gene09815:CDS |
| TATGTATCTTGATAATTCCG+GGG | 0.634354 | 7.1:+7731446 | MS.gene09815:CDS |
| GAAAGAAAGAATGAATGTGG+TGG | 0.636069 | 7.1:+7731209 | None:intergenic |
| GGTGAGTTATCTCCCATCAG+TGG | 0.640463 | 7.1:+7732329 | MS.gene09815:CDS |
| AGAATGGGTTATAATCAGAA+GGG | 0.641875 | 7.1:-7735697 | None:intergenic |
| GAAGGGACTGATTTCTACGA+AGG | 0.643261 | 7.1:+7731915 | MS.gene09815:CDS |
| GTTCAAGCAAAGACGTAGGA+GGG | 0.648088 | 7.1:-7735981 | None:intergenic |
| ATTATAACCCATTCTACGCG+GGG | 0.652502 | 7.1:+7735705 | MS.gene09815:CDS |
| CACAAGAATTGTATCTTCAG+GGG | 0.660656 | 7.1:-7732927 | None:intergenic |
| ACTGAAAGAAAGAATGAATG+TGG | 0.662863 | 7.1:+7731206 | None:intergenic |
| TGAACACTAATAGGGTGAGG+TGG | 0.663341 | 7.1:+7735894 | MS.gene09815:intron |
| CTTGCAGGGTTCTAATCCGG+AGG | 0.664062 | 7.1:+7731782 | MS.gene09815:CDS |
| AGACAGCAACTTCCAATGAG+GGG | 0.667001 | 7.1:+7732549 | MS.gene09815:CDS |
| TGATTATAACCCATTCTACG+CGG | 0.668117 | 7.1:+7735703 | MS.gene09815:CDS |
| TCATAGCGTATCTGATTCGG+GGG | 0.670402 | 7.1:+7731605 | MS.gene09815:CDS |
| ACCACCAAAAGGGTGAAAAG+GGG | 0.671766 | 7.1:-7731277 | None:intergenic |
| AGCACATCGAATATCTGCTG+AGG | 0.674065 | 7.1:+7732769 | MS.gene09815:CDS |
| GGTGAATCAAAACTCAGCGG+AGG | 0.674797 | 7.1:+7732238 | MS.gene09815:CDS |
| AGTTAGTAACACCTTCAACA+GGG | 0.677470 | 7.1:-7731524 | None:intergenic |
| AGGAGACTCAAGCCTACCTG+AGG | 0.678173 | 7.1:-7733140 | None:intergenic |
| TAGTGGTGATGAATCAAGTG+AGG | 0.678368 | 7.1:+7733063 | MS.gene09815:CDS |
| GTATCTTGATAATTCCGGGG+AGG | 0.679242 | 7.1:+7731449 | MS.gene09815:CDS |
| AGAATATGGAGAGAATGTTG+TGG | 0.680826 | 7.1:+7731758 | MS.gene09815:CDS |
| TGATTTCTACGAAGGCAATG+AGG | 0.683113 | 7.1:+7731923 | MS.gene09815:CDS |
| TAACATTCAGTTTCTCTACG+AGG | 0.686208 | 7.1:+7733242 | MS.gene09815:CDS |
| GACCATCTTCGTCTGGACGT+AGG | 0.688284 | 7.1:+7732990 | MS.gene09815:CDS |
| CTCAGAATTAGAGCCAACTG+AGG | 0.700989 | 7.1:+7731848 | MS.gene09815:CDS |
| AAAGGGACCTATTTGTCACA+CGG | 0.702150 | 7.1:+7732088 | MS.gene09815:CDS |
| AGCCATCTCCAACCTCAGGT+AGG | 0.703115 | 7.1:+7733128 | MS.gene09815:CDS |
| AGATTGGAACCAGACTGGGG+TGG | 0.726345 | 7.1:+7734173 | MS.gene09815:CDS |
| AAAAGATTGGAACCAGACTG+GGG | 0.727153 | 7.1:+7734170 | MS.gene09815:CDS |
| ACCTGTTCAAGCAAAGACGT+AGG | 0.741164 | 7.1:-7735985 | None:intergenic |
| ATTGGTGAATCAAAACTCAG+CGG | 0.751587 | 7.1:+7732235 | MS.gene09815:CDS |
| GGGACCTATTTGTCACACGG+AGG | 0.770332 | 7.1:+7732091 | MS.gene09815:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAACAATTTAGAAATAT+TGG | + | chr7.1:7732308-7732327 | MS.gene09815:CDS | 10.0% |
| !!! | ATATTTGTTTTTTTCTTAAA+AGG | + | chr7.1:7733962-7733981 | MS.gene09815:intron | 10.0% |
| !! | AAGAAAATCAAATAAACAAT+TGG | - | chr7.1:7732662-7732681 | None:intergenic | 15.0% |
| !! | ATAAAATTCAATGAAACAAT+AGG | - | chr7.1:7735067-7735086 | None:intergenic | 15.0% |
| !! | TTACTTCATAAATGAAAATA+GGG | + | chr7.1:7733649-7733668 | MS.gene09815:intron | 15.0% |
| !! | TTTACTTCATAAATGAAAAT+AGG | + | chr7.1:7733648-7733667 | MS.gene09815:intron | 15.0% |
| !!! | AATATTTTAACAATGATAAC+TGG | - | chr7.1:7735299-7735318 | None:intergenic | 15.0% |
| !!! | AATTTAAAATCAGAATTTCA+AGG | + | chr7.1:7732383-7732402 | MS.gene09815:CDS | 15.0% |
| !!! | AATTTTGTCTTATTTACTTA+TGG | + | chr7.1:7735501-7735520 | MS.gene09815:intron | 15.0% |
| !!! | ATATTTTAACAATGATAACT+GGG | - | chr7.1:7735298-7735317 | None:intergenic | 15.0% |
| !!! | ATTTAAAATCAGAATTTCAA+GGG | + | chr7.1:7732384-7732403 | MS.gene09815:CDS | 15.0% |
| !!! | GATTCATTTTATAAAATAAG+GGG | - | chr7.1:7733577-7733596 | None:intergenic | 15.0% |
| !!! | GGATTCATTTTATAAAATAA+GGG | - | chr7.1:7733578-7733597 | None:intergenic | 15.0% |
| !!! | TTTTTATTCTTAGTTATAGA+TGG | - | chr7.1:7732812-7732831 | None:intergenic | 15.0% |
| !! | AATATTTATCATTAACCCTA+AGG | + | chr7.1:7735787-7735806 | MS.gene09815:CDS | 20.0% |
| !! | ACTTTCAAAACTAACAAATT+TGG | + | chr7.1:7736051-7736070 | MS.gene09815:intron | 20.0% |
| !! | ATTGTGAAGATAAATGTTAA+TGG | + | chr7.1:7731405-7731424 | MS.gene09815:CDS | 20.0% |
| !! | CAAAGTATATATAGTGATAT+GGG | - | chr7.1:7733313-7733332 | None:intergenic | 20.0% |
| !! | TTGATGCTCATATATATTTA+TGG | + | chr7.1:7733381-7733400 | MS.gene09815:CDS | 20.0% |
| !! | TTGTGAAGATAAATGTTAAT+GGG | + | chr7.1:7731406-7731425 | MS.gene09815:CDS | 20.0% |
| !!! | AATTGGCTTAATCAAATAAT+AGG | - | chr7.1:7732645-7732664 | None:intergenic | 20.0% |
| !!! | ATGATAAATATTTTTCCCTT+TGG | - | chr7.1:7735779-7735798 | None:intergenic | 20.0% |
| !!! | CTTAATGGTATTCTTTTTTA+CGG | + | chr7.1:7734484-7734503 | MS.gene09815:intron | 20.0% |
| !!! | GGGATTCATTTTATAAAATA+AGG | - | chr7.1:7733579-7733598 | None:intergenic | 20.0% |
| !!! | TATGAATATGTGCATTTTTA+AGG | - | chr7.1:7734090-7734109 | None:intergenic | 20.0% |
| !!! | TCTTTTCAAAATTTAGACAA+TGG | - | chr7.1:7733815-7733834 | None:intergenic | 20.0% |
| !!! | TGAACTTTTAATTTCATAAC+AGG | + | chr7.1:7733358-7733377 | MS.gene09815:intron | 20.0% |
| !!! | TTTAAAATCAGAATTTCAAG+GGG | + | chr7.1:7732385-7732404 | MS.gene09815:CDS | 20.0% |
| !!! | TTTGTCTTTTAGTAATCTTA+TGG | + | chr7.1:7733692-7733711 | MS.gene09815:intron | 20.0% |
| !!! | TTTTCTTCATTATCTTTTTC+TGG | + | chr7.1:7733839-7733858 | MS.gene09815:intron | 20.0% |
| ! | AAAATATTGCATTACCTGAT+AGG | + | chr7.1:7735311-7735330 | MS.gene09815:intron | 25.0% |
| ! | AACAACTTCTGTTAACTTAA+TGG | + | chr7.1:7734469-7734488 | MS.gene09815:intron | 25.0% |
| ! | AACAATTACTGAAATTTGCA+TGG | - | chr7.1:7733614-7733633 | None:intergenic | 25.0% |
| ! | AAGAATTGTAATTTCAGATG+TGG | + | chr7.1:7733415-7733434 | MS.gene09815:CDS | 25.0% |
| ! | AGTAAAATAGGAATTCCAAA+GGG | + | chr7.1:7735761-7735780 | MS.gene09815:CDS | 25.0% |
| ! | ATAACTATATATTTGCAGGA+TGG | + | chr7.1:7735342-7735361 | MS.gene09815:intron | 25.0% |
| ! | ATATATACACACACATTAAC+AGG | + | chr7.1:7734584-7734603 | MS.gene09815:intron | 25.0% |
| ! | ATATGCTTATGAACACTAAT+AGG | + | chr7.1:7735885-7735904 | MS.gene09815:intron | 25.0% |
| ! | ATCCTGCAAATATATAGTTA+TGG | - | chr7.1:7735343-7735362 | None:intergenic | 25.0% |
| ! | ATTTATCTTCACAATCTTCT+CGG | - | chr7.1:7731400-7731419 | None:intergenic | 25.0% |
| ! | CAACTAAATAGATACCTTAA+TGG | - | chr7.1:7734214-7734233 | None:intergenic | 25.0% |
| ! | CCAAAGTATATATAGTGATA+TGG | - | chr7.1:7733314-7733333 | None:intergenic | 25.0% |
| ! | CCATATCACTATATATACTT+TGG | + | chr7.1:7733311-7733330 | MS.gene09815:intron | 25.0% |
| ! | CTCATATATATTTATGGAAG+TGG | + | chr7.1:7733387-7733406 | MS.gene09815:CDS | 25.0% |
| ! | GAACTAAGTTACAGTAAAAT+AGG | + | chr7.1:7735749-7735768 | MS.gene09815:CDS | 25.0% |
| ! | TACCATAACTATATATTTGC+AGG | + | chr7.1:7735338-7735357 | MS.gene09815:intron | 25.0% |
| ! | TAGTTGAATCTAAATTCTAC+AGG | - | chr7.1:7734968-7734987 | None:intergenic | 25.0% |
| ! | TATGCTTATGAACACTAATA+GGG | + | chr7.1:7735886-7735905 | MS.gene09815:intron | 25.0% |
| ! | TCATAAATGAAAATAGGGAA+AGG | + | chr7.1:7733654-7733673 | MS.gene09815:intron | 25.0% |
| ! | TGTACTTGAAATTATTAGTG+AGG | + | chr7.1:7732505-7732524 | MS.gene09815:CDS | 25.0% |
| ! | TGTGAAGATAAATGTTAATG+GGG | + | chr7.1:7731407-7731426 | MS.gene09815:CDS | 25.0% |
| ! | TTAAGTTAACAGAAGTTGTT+TGG | - | chr7.1:7734469-7734488 | None:intergenic | 25.0% |
| ! | TTAGATTCAACTACATTTAG+TGG | + | chr7.1:7734975-7734994 | MS.gene09815:intron | 25.0% |
| ! | TTATAAAATGAATCCCAGTT+TGG | + | chr7.1:7733583-7733602 | MS.gene09815:intron | 25.0% |
| !! | AAAATAAGAGTATGCATTAC+AGG | - | chr7.1:7735240-7735259 | None:intergenic | 25.0% |
| !! | ACTAATAATTTCAAGTACAG+TGG | - | chr7.1:7732504-7732523 | None:intergenic | 25.0% |
| !! | AGTAAGAAAATGCCTTTTAA+TGG | - | chr7.1:7735625-7735644 | None:intergenic | 25.0% |
| !! | AGTGTTGAAATTGATATTAC+TGG | + | chr7.1:7731570-7731589 | MS.gene09815:CDS | 25.0% |
| !! | ATATGTATCTTGATAATTCC+GGG | + | chr7.1:7731445-7731464 | MS.gene09815:CDS | 25.0% |
| !! | ATTTTGTCGAGTTCAAATAA+TGG | - | chr7.1:7733491-7733510 | None:intergenic | 25.0% |
| !! | CATATGTATCTTGATAATTC+CGG | + | chr7.1:7731444-7731463 | MS.gene09815:CDS | 25.0% |
| !! | GTAAAAGACTAGTTAGATAA+TGG | + | chr7.1:7734723-7734742 | MS.gene09815:intron | 25.0% |
| !! | TTATATAACCAGGAACTTTT+TGG | + | chr7.1:7735179-7735198 | MS.gene09815:CDS | 25.0% |
| !! | TTTTAATGAGAGAGCAATTA+AGG | + | chr7.1:7735442-7735461 | MS.gene09815:intron | 25.0% |
| !!! | AGAAAGCATTTACAAAACAA+CGG | + | chr7.1:7736009-7736028 | MS.gene09815:intron | 25.0% |
| !!! | AGTATTTATAGCTCTGATAT+CGG | + | chr7.1:7732023-7732042 | MS.gene09815:CDS | 25.0% |
| !!! | TGGATTATTGTTATTTCTGA+CGG | + | chr7.1:7735823-7735842 | MS.gene09815:intron | 25.0% |
| AAATGGTAGAAGATATTTCG+AGG | + | chr7.1:7734297-7734316 | MS.gene09815:intron | 30.0% | |
| AACTTGAAAGCTCCATTAAA+AGG | + | chr7.1:7735610-7735629 | MS.gene09815:intron | 30.0% | |
| AATAAGGGGTTAATTGAGTA+CGG | - | chr7.1:7733563-7733582 | None:intergenic | 30.0% | |
| AATGGTAGAAGATATTTCGA+GGG | + | chr7.1:7734298-7734317 | MS.gene09815:intron | 30.0% | |
| AATTTAGACAATGGATCACT+AGG | - | chr7.1:7733806-7733825 | None:intergenic | 30.0% | |
| ACAAATTCCTCAATTTCACT+TGG | + | chr7.1:7731884-7731903 | MS.gene09815:CDS | 30.0% | |
| ACTTCAACTCTTGGAATTAT+TGG | + | chr7.1:7736101-7736120 | MS.gene09815:CDS | 30.0% | |
| AGTTGCACATTAGTGATATA+AGG | - | chr7.1:7735594-7735613 | None:intergenic | 30.0% | |
| ATAAACACCCTTAGTTATCA+AGG | - | chr7.1:7731247-7731266 | None:intergenic | 30.0% | |
| ATCACTATATATACTTTGGC+TGG | + | chr7.1:7733315-7733334 | MS.gene09815:intron | 30.0% | |
| ATGGCAATTTACAAGATGAA+AGG | + | chr7.1:7732207-7732226 | MS.gene09815:CDS | 30.0% | |
| ATTGTAATTTCAGATGTGGA+TGG | + | chr7.1:7733419-7733438 | MS.gene09815:CDS | 30.0% | |
| CAAACTAACGATGAATGTTT+AGG | - | chr7.1:7733761-7733780 | None:intergenic | 30.0% | |
| CAAATTCCTCAATTTCACTT+GGG | + | chr7.1:7731885-7731904 | MS.gene09815:CDS | 30.0% | |
| CACTTAATGCTTGTTTGATT+TGG | + | chr7.1:7734910-7734929 | MS.gene09815:intron | 30.0% | |
| CAGTAAAATAGGAATTCCAA+AGG | + | chr7.1:7735760-7735779 | MS.gene09815:CDS | 30.0% | |
| CATTATTACCCAAACATGAA+TGG | - | chr7.1:7735652-7735671 | None:intergenic | 30.0% | |
| CTCTTTGCAGCTATATAATA+TGG | + | chr7.1:7734746-7734765 | MS.gene09815:intron | 30.0% | |
| GAATCTAAATTCTACAGGAA+TGG | - | chr7.1:7734963-7734982 | None:intergenic | 30.0% | |
| GAATTTGATATCTCACTTTG+TGG | + | chr7.1:7732695-7732714 | MS.gene09815:intron | 30.0% | |
| GATATCAGAGCTATAAATAC+TGG | - | chr7.1:7732024-7732043 | None:intergenic | 30.0% | |
| GTAATATGTTTGTGCATGTA+AGG | - | chr7.1:7734054-7734073 | None:intergenic | 30.0% | |
| GTGACAGAAACATAATGAAA+TGG | - | chr7.1:7734382-7734401 | None:intergenic | 30.0% | |
| TAAGTGTCCAAATAGAAACA+GGG | - | chr7.1:7734896-7734915 | None:intergenic | 30.0% | |
| TAATGAAATGGTAGCAACAA+AGG | - | chr7.1:7734370-7734389 | None:intergenic | 30.0% | |
| TACTAACACCATTCATGTTT+GGG | + | chr7.1:7735641-7735660 | MS.gene09815:intron | 30.0% | |
| TATATAGTGATATGGGAACT+TGG | - | chr7.1:7733306-7733325 | None:intergenic | 30.0% | |
| TCAACCAACAATTGAAGATT+CGG | + | chr7.1:7731725-7731744 | MS.gene09815:CDS | 30.0% | |
| TCAACCTGAAATAAGCAAAA+TGG | - | chr7.1:7733341-7733360 | None:intergenic | 30.0% | |
| TCTCAAAGATGGTCAAAATA+TGG | + | chr7.1:7733219-7733238 | MS.gene09815:CDS | 30.0% | |
| TGATATAAGGATTTGTGTCT+AGG | - | chr7.1:7735581-7735600 | None:intergenic | 30.0% | |
| TTAAGTGTCCAAATAGAAAC+AGG | - | chr7.1:7734897-7734916 | None:intergenic | 30.0% | |
| TTACTAACACCATTCATGTT+TGG | + | chr7.1:7735640-7735659 | MS.gene09815:intron | 30.0% | |
| TTGTCTCAAAACTGAAAATC+TGG | - | chr7.1:7734428-7734447 | None:intergenic | 30.0% | |
| ! | AAATAGGTCCCTTTTCTATT+TGG | - | chr7.1:7732082-7732101 | None:intergenic | 30.0% |
| ! | AAATTTCAAGGTGTTCTCAA+AGG | + | chr7.1:7731372-7731391 | MS.gene09815:CDS | 30.0% |
| ! | ATTTAAAGCATCTTGTGTCT+TGG | + | chr7.1:7734328-7734347 | MS.gene09815:intron | 30.0% |
| ! | ATTTGGAACCTTGATAACTA+AGG | + | chr7.1:7731236-7731255 | MS.gene09815:CDS | 30.0% |
| ! | GTAAGGTTTGGTAAATTTCA+AGG | + | chr7.1:7731360-7731379 | MS.gene09815:CDS | 30.0% |
| ! | TATGTATCTTGATAATTCCG+GGG | + | chr7.1:7731446-7731465 | MS.gene09815:CDS | 30.0% |
| ! | TCCATTTTCCTAACAAAATC+AGG | - | chr7.1:7735118-7735137 | None:intergenic | 30.0% |
| ! | TCCTGATTTTGTTAGGAAAA+TGG | + | chr7.1:7735114-7735133 | MS.gene09815:intron | 30.0% |
| ! | TTCCAATCTTTTCCAACTAA+AGG | - | chr7.1:7734162-7734181 | None:intergenic | 30.0% |
| ! | TTTGGAACCTTGATAACTAA+GGG | + | chr7.1:7731237-7731256 | MS.gene09815:CDS | 30.0% |
| ! | TTTGGGTAATAATGTTTTGC+AGG | + | chr7.1:7735658-7735677 | MS.gene09815:intron | 30.0% |
| !! | AGAATGGGTTATAATCAGAA+GGG | - | chr7.1:7735700-7735719 | None:intergenic | 30.0% |
| !! | CAAACAGTTGATGATGTAAA+TGG | + | chr7.1:7734280-7734299 | MS.gene09815:intron | 30.0% |
| !! | GAAAGCATTTACAAAACAAC+GGG | + | chr7.1:7736010-7736029 | MS.gene09815:intron | 30.0% |
| !! | GAATATGTGCATTTTTAAGG+AGG | - | chr7.1:7734087-7734106 | None:intergenic | 30.0% |
| !! | TAGAATGGGTTATAATCAGA+AGG | - | chr7.1:7735701-7735720 | None:intergenic | 30.0% |
| !! | TATCTTTTTCTGGCCATTTT+TGG | + | chr7.1:7733849-7733868 | MS.gene09815:intron | 30.0% |
| !! | TGGTTTGCAATTTTCATTTG+TGG | + | chr7.1:7736071-7736090 | MS.gene09815:intron | 30.0% |
| !!! | GTATTTTCTTTAGTTCTCAC+AGG | + | chr7.1:7735849-7735868 | MS.gene09815:intron | 30.0% |
| AAAATAGGGAAAGGAAATGC+AGG | + | chr7.1:7733663-7733682 | MS.gene09815:intron | 35.0% | |
| AAAATCTGGACCCCTAATTT+GGG | - | chr7.1:7734414-7734433 | None:intergenic | 35.0% | |
| AACATTCAGTTTCTCTACGA+GGG | + | chr7.1:7733243-7733262 | MS.gene09815:CDS | 35.0% | |
| AAGGTAAAGAACGATAGCAA+TGG | - | chr7.1:7733523-7733542 | None:intergenic | 35.0% | |
| AGAATATGGAGAGAATGTTG+TGG | + | chr7.1:7731758-7731777 | MS.gene09815:CDS | 35.0% | |
| AGAGCCAAACAAATCAGATT+CGG | - | chr7.1:7733104-7733123 | None:intergenic | 35.0% | |
| AGTCCTTACTCAAACCAAAA+TGG | - | chr7.1:7732583-7732602 | None:intergenic | 35.0% | |
| AGTTAGTAACACCTTCAACA+GGG | - | chr7.1:7731527-7731546 | None:intergenic | 35.0% | |
| ATAAAATGTCCGACCAACAT+CGG | - | chr7.1:7731691-7731710 | None:intergenic | 35.0% | |
| ATTGGTGAATCAAAACTCAG+CGG | + | chr7.1:7732235-7732254 | MS.gene09815:CDS | 35.0% | |
| CAATCAAAGTAGATGCTAGT+TGG | - | chr7.1:7733885-7733904 | None:intergenic | 35.0% | |
| CACAAGAATTGTATCTTCAG+GGG | - | chr7.1:7732930-7732949 | None:intergenic | 35.0% | |
| CATTATAGATGCAGACCTTA+GGG | - | chr7.1:7735805-7735824 | None:intergenic | 35.0% | |
| CCACAAGAATTGTATCTTCA+GGG | - | chr7.1:7732931-7732950 | None:intergenic | 35.0% | |
| CCTGAAGATACAATTCTTGT+GGG | + | chr7.1:7732929-7732948 | MS.gene09815:CDS | 35.0% | |
| GAAGGTTGCCAAATAGAAAA+GGG | + | chr7.1:7732071-7732090 | MS.gene09815:CDS | 35.0% | |
| GATGCTATCATCTCATTAGA+GGG | - | chr7.1:7733193-7733212 | None:intergenic | 35.0% | |
| GATGGAAAAACCTTACCAAA+AGG | + | chr7.1:7735360-7735379 | MS.gene09815:CDS | 35.0% | |
| GCATCATTGAATCTCAAAGA+TGG | + | chr7.1:7733208-7733227 | MS.gene09815:CDS | 35.0% | |
| TAACATTCAGTTTCTCTACG+AGG | + | chr7.1:7733242-7733261 | MS.gene09815:CDS | 35.0% | |
| TCAGAGCTATAAATACTGGA+TGG | - | chr7.1:7732020-7732039 | None:intergenic | 35.0% | |
| TGATCATAGCGTATCTGATT+CGG | + | chr7.1:7731602-7731621 | MS.gene09815:CDS | 35.0% | |
| TGATGCTATCATCTCATTAG+AGG | - | chr7.1:7733194-7733213 | None:intergenic | 35.0% | |
| TGATTATAACCCATTCTACG+CGG | + | chr7.1:7735703-7735722 | MS.gene09815:CDS | 35.0% | |
| TGCCTTTAGTTGGAAAAGAT+TGG | + | chr7.1:7734157-7734176 | MS.gene09815:CDS | 35.0% | |
| TGGTTGATCTTCACCAAAAA+TGG | - | chr7.1:7733865-7733884 | None:intergenic | 35.0% | |
| TTAAAAGTTCCTGACCTTCT+CGG | - | chr7.1:7735428-7735447 | None:intergenic | 35.0% | |
| TTACCAAACCTTACATACCA+AGG | - | chr7.1:7731354-7731373 | None:intergenic | 35.0% | |
| TTATGAACACTAATAGGGTG+AGG | + | chr7.1:7735891-7735910 | MS.gene09815:intron | 35.0% | |
| TTCCTAACAAAATCAGGATC+TGG | - | chr7.1:7735112-7735131 | None:intergenic | 35.0% | |
| ! | AGCAACAAGATGGAACTTTT+CGG | + | chr7.1:7731322-7731341 | MS.gene09815:CDS | 35.0% |
| ! | AGTTTTGCCAGAACTTCAAA+AGG | + | chr7.1:7731659-7731678 | MS.gene09815:CDS | 35.0% |
| ! | ATGAATGTGGTGGGAAAATT+TGG | + | chr7.1:7731219-7731238 | MS.gene09815:CDS | 35.0% |
| ! | ATTGTTGTTCAGCAACAAGA+TGG | + | chr7.1:7731312-7731331 | MS.gene09815:CDS | 35.0% |
| ! | CTTTCAGATCTGATGTTTTG+GGG | + | chr7.1:7734127-7734146 | MS.gene09815:intron | 35.0% |
| ! | GAAATAACAACAGGTCCTTT+TGG | - | chr7.1:7735378-7735397 | None:intergenic | 35.0% |
| ! | GAGTGATTTTTGCAAACACT+TGG | + | chr7.1:7734546-7734565 | MS.gene09815:intron | 35.0% |
| ! | GAGTGTTTTCAAAAGTTGCT+TGG | + | chr7.1:7732154-7732173 | MS.gene09815:CDS | 35.0% |
| ! | GCTTTCAGATCTGATGTTTT+GGG | + | chr7.1:7734126-7734145 | MS.gene09815:intron | 35.0% |
| ! | GTGTTGCTGATTATGTTAGT+AGG | + | chr7.1:7731970-7731989 | MS.gene09815:CDS | 35.0% |
| ! | TACCAGATCCTGATTTTGTT+AGG | + | chr7.1:7735107-7735126 | MS.gene09815:intron | 35.0% |
| ! | TCTGAGTTTACTTCTGAAGA+CGG | + | chr7.1:7731546-7731565 | MS.gene09815:CDS | 35.0% |
| ! | TGCTTTCAGATCTGATGTTT+TGG | + | chr7.1:7734125-7734144 | MS.gene09815:intron | 35.0% |
| ! | TTGCAATTTTCATTTGTGGC+AGG | + | chr7.1:7736075-7736094 | MS.gene09815:intron | 35.0% |
| ! | TTTTACAAAATAAGCCTCCC+CGG | - | chr7.1:7731466-7731485 | None:intergenic | 35.0% |
| ! | TTTTGTAAAAGAGGTGGATG+AGG | + | chr7.1:7731476-7731495 | MS.gene09815:CDS | 35.0% |
| !! | CATCTTTCCCTGTTTCTATT+TGG | + | chr7.1:7734886-7734905 | MS.gene09815:intron | 35.0% |
| !! | GATTCCGAATCTGATTTGTT+TGG | + | chr7.1:7733097-7733116 | MS.gene09815:CDS | 35.0% |
| !! | TTCACTTTTCGAAAAGCAAG+AGG | - | chr7.1:7733028-7733047 | None:intergenic | 35.0% |
| !! | TTGGCTCTAATTCTGAGATA+GGG | - | chr7.1:7731845-7731864 | None:intergenic | 35.0% |
| !!! | AAGCCATTTTGGTTTGAGTA+AGG | + | chr7.1:7732577-7732596 | MS.gene09815:intron | 35.0% |
| !!! | CAAGTCTGGTTTTTGCTTTA+TGG | + | chr7.1:7734680-7734699 | MS.gene09815:intron | 35.0% |
| !!! | CTTTTTGGTTAACCTGAAAC+AGG | + | chr7.1:7735194-7735213 | MS.gene09815:CDS | 35.0% |
| !!! | GGAGGCTTATTTTGTAAAAG+AGG | + | chr7.1:7731467-7731486 | MS.gene09815:CDS | 35.0% |
| !!! | GGCTTATTTTGTAAAAGAGG+TGG | + | chr7.1:7731470-7731489 | MS.gene09815:CDS | 35.0% |
| !!! | TGAGTTTTGATTCACCAATG+AGG | - | chr7.1:7732234-7732253 | None:intergenic | 35.0% |
| AAAAGATTGGAACCAGACTG+GGG | + | chr7.1:7734170-7734189 | MS.gene09815:CDS | 40.0% | |
| AAAGGGACCTATTTGTCACA+CGG | + | chr7.1:7732088-7732107 | MS.gene09815:CDS | 40.0% | |
| AAGCAAGTTCCTTTGAGCTT+GGG | + | chr7.1:7734621-7734640 | MS.gene09815:intron | 40.0% | |
| AATCTCAAACCCAAGCTCAA+AGG | - | chr7.1:7734633-7734652 | None:intergenic | 40.0% | |
| ACAACGTGCTTCCCAAATTA+GGG | + | chr7.1:7734400-7734419 | MS.gene09815:intron | 40.0% | |
| ACAAGATGAAAGGTCCTCAT+TGG | + | chr7.1:7732217-7732236 | MS.gene09815:CDS | 40.0% | |
| ACGCAGTGAAGTCATTAAAG+AGG | - | chr7.1:7734862-7734881 | None:intergenic | 40.0% | |
| ACTTTGTGGTCACGAACTTA+AGG | + | chr7.1:7732709-7732728 | MS.gene09815:CDS | 40.0% | |
| AGCTGCATCATGCATGAATT+CGG | + | chr7.1:7732130-7732149 | MS.gene09815:CDS | 40.0% | |
| AGTTATGGTATCAGCCTATC+AGG | - | chr7.1:7735328-7735347 | None:intergenic | 40.0% | |
| AGTTCCTGGTTATATAAGCC+TGG | - | chr7.1:7735176-7735195 | None:intergenic | 40.0% | |
| ATATCGGTAATAGTGCTTCC+GGG | + | chr7.1:7732039-7732058 | MS.gene09815:CDS | 40.0% | |
| ATTATAACCCATTCTACGCG+GGG | + | chr7.1:7735705-7735724 | MS.gene09815:CDS | 40.0% | |
| CAAGCAATCTTGAACTCATG+AGG | - | chr7.1:7735544-7735563 | None:intergenic | 40.0% | |
| CACACATTAACAGGTTTCCT+AGG | + | chr7.1:7734593-7734612 | MS.gene09815:intron | 40.0% | |
| CAGAGAGAGTTATCTACCAT+GGG | + | chr7.1:7732847-7732866 | MS.gene09815:CDS | 40.0% | |
| CAGGTTAACCAAAAAGTTCC+TGG | - | chr7.1:7735190-7735209 | None:intergenic | 40.0% | |
| CCATCAGGTGAAATAACAAC+AGG | - | chr7.1:7735387-7735406 | None:intergenic | 40.0% | |
| CCATTATAGATGCAGACCTT+AGG | - | chr7.1:7735806-7735825 | None:intergenic | 40.0% | |
| CCCACAAGAATTGTATCTTC+AGG | - | chr7.1:7732932-7732951 | None:intergenic | 40.0% | |
| CCCTGAAGATACAATTCTTG+TGG | + | chr7.1:7732928-7732947 | MS.gene09815:CDS | 40.0% | |
| CCTAAGGTCTGCATCTATAA+TGG | + | chr7.1:7735803-7735822 | MS.gene09815:intron | 40.0% | |
| CGAAGGTTGCCAAATAGAAA+AGG | + | chr7.1:7732070-7732089 | MS.gene09815:CDS | 40.0% | |
| GAAAAGATTGGAACCAGACT+GGG | + | chr7.1:7734169-7734188 | MS.gene09815:CDS | 40.0% | |
| GAAAATCTGGACCCCTAATT+TGG | - | chr7.1:7734415-7734434 | None:intergenic | 40.0% | |
| GACTACTGACAGTACTTCTT+AGG | + | chr7.1:7733458-7733477 | MS.gene09815:intron | 40.0% | |
| GAGTTAGTAACACCTTCAAC+AGG | - | chr7.1:7731528-7731547 | None:intergenic | 40.0% | |
| GAGTTATCTACCATGGGAAA+AGG | + | chr7.1:7732853-7732872 | MS.gene09815:CDS | 40.0% | |
| GATATCGGTAATAGTGCTTC+CGG | + | chr7.1:7732038-7732057 | MS.gene09815:CDS | 40.0% | |
| GATCATAGCGTATCTGATTC+GGG | + | chr7.1:7731603-7731622 | MS.gene09815:CDS | 40.0% | |
| GATTATAACCCATTCTACGC+GGG | + | chr7.1:7735704-7735723 | MS.gene09815:CDS | 40.0% | |
| GTTCAAGATTGCTTGTCTAG+AGG | + | chr7.1:7735549-7735568 | MS.gene09815:CDS | 40.0% | |
| TAAGCAAGTTCCTTTGAGCT+TGG | + | chr7.1:7734620-7734639 | MS.gene09815:intron | 40.0% | |
| TATAAGCCTGGACAATAGCA+CGG | - | chr7.1:7735164-7735183 | None:intergenic | 40.0% | |
| TCAGAGAGAGTTATCTACCA+TGG | + | chr7.1:7732846-7732865 | MS.gene09815:CDS | 40.0% | |
| TCAGCCGAATCTTCAATTGT+TGG | - | chr7.1:7731732-7731751 | None:intergenic | 40.0% | |
| TGATTTCTACGAAGGCAATG+AGG | + | chr7.1:7731923-7731942 | MS.gene09815:CDS | 40.0% | |
| TTCTACAGGAATGGTGTAGA+AGG | - | chr7.1:7734954-7734973 | None:intergenic | 40.0% | |
| TTCTTGTGGGTCAAGATGAT+AGG | + | chr7.1:7732942-7732961 | MS.gene09815:CDS | 40.0% | |
| TTGCATGGTATGTCCAAACT+GGG | - | chr7.1:7733599-7733618 | None:intergenic | 40.0% | |
| TTGTCCAGGCTTATATAACC+AGG | + | chr7.1:7735169-7735188 | MS.gene09815:CDS | 40.0% | |
| TTTGCATGGTATGTCCAAAC+TGG | - | chr7.1:7733600-7733619 | None:intergenic | 40.0% | |
| TTTGCCAGAACTTCAAAAGG+TGG | + | chr7.1:7731662-7731681 | MS.gene09815:CDS | 40.0% | |
| ! | AACAACAGGTCCTTTTGGTA+AGG | - | chr7.1:7735373-7735392 | None:intergenic | 40.0% |
| ! | AAGGCTTTTCTCTGCCATTA+AGG | + | chr7.1:7734197-7734216 | MS.gene09815:CDS | 40.0% |
| ! | AGGAACTTGCTTAAGTTCCT+AGG | - | chr7.1:7734613-7734632 | None:intergenic | 40.0% |
| ! | ATCATAGCGTATCTGATTCG+GGG | + | chr7.1:7731604-7731623 | MS.gene09815:CDS | 40.0% |
| ! | CAATTTTCATTTGTGGCAGG+AGG | + | chr7.1:7736078-7736097 | MS.gene09815:intron | 40.0% |
| ! | CTTAAATGAACTTGCTCAGC+AGG | + | chr7.1:7732178-7732197 | MS.gene09815:CDS | 40.0% |
| ! | GACTGCAAATTTTCCTCAGT+TGG | - | chr7.1:7731864-7731883 | None:intergenic | 40.0% |
| ! | GTACTGTCAGTAGTCTTACT+TGG | - | chr7.1:7733453-7733472 | None:intergenic | 40.0% |
| ! | TAGTGGTGATGAATCAAGTG+AGG | + | chr7.1:7733063-7733082 | MS.gene09815:CDS | 40.0% |
| ! | TGCTGATTATGTTAGTAGGC+CGG | + | chr7.1:7731974-7731993 | MS.gene09815:CDS | 40.0% |
| ! | TTCTAGGAACACAACAGGTT+TGG | + | chr7.1:7733266-7733285 | MS.gene09815:intron | 40.0% |
| !! | CCTGTTGTTATTTCACCTGA+TGG | + | chr7.1:7735384-7735403 | MS.gene09815:CDS | 40.0% |
| !! | CTGGCCATTTTGCTTATTTC+AGG | + | chr7.1:7733334-7733353 | MS.gene09815:intron | 40.0% |
| !! | GTTGGCTCTAATTCTGAGAT+AGG | - | chr7.1:7731846-7731865 | None:intergenic | 40.0% |
| !! | TCGGCTGATTTGTCAGAATA+TGG | + | chr7.1:7731744-7731763 | MS.gene09815:CDS | 40.0% |
| !! | TGGCTCTAATTCTGAGATAG+GGG | - | chr7.1:7731844-7731863 | None:intergenic | 40.0% |
| !!! | GATTCCACCTTTTGAAGTTC+TGG | - | chr7.1:7731669-7731688 | None:intergenic | 40.0% |
| AAGACAGCTGAGCACAATAG+TGG | + | chr7.1:7733046-7733065 | MS.gene09815:CDS | 45.0% | |
| AAGTCCAGCGATGATAATCC+TGG | + | chr7.1:7732968-7732987 | MS.gene09815:CDS | 45.0% | |
| ACATCAACAGCACCACCAAA+AGG | - | chr7.1:7731291-7731310 | None:intergenic | 45.0% | |
| ACCACCAAAAGGGTGAAAAG+GGG | - | chr7.1:7731280-7731299 | None:intergenic | 45.0% | |
| ACCTGTTCAAGCAAAGACGT+AGG | - | chr7.1:7735988-7736007 | None:intergenic | 45.0% | |
| ACGCCTTGGTATGTAAGGTT+TGG | + | chr7.1:7731348-7731367 | MS.gene09815:CDS | 45.0% | |
| AGACAGCAACTTCCAATGAG+GGG | + | chr7.1:7732549-7732568 | MS.gene09815:CDS | 45.0% | |
| AGAGAATGTTGTGGACTTGC+AGG | + | chr7.1:7731767-7731786 | MS.gene09815:CDS | 45.0% | |
| AGCAAAAACCAGACTTGACC+AGG | - | chr7.1:7734677-7734696 | None:intergenic | 45.0% | |
| AGCACATCGAATATCTGCTG+AGG | + | chr7.1:7732769-7732788 | MS.gene09815:CDS | 45.0% | |
| AGGGACGGAAATAATCCATC+AGG | - | chr7.1:7735402-7735421 | None:intergenic | 45.0% | |
| AGTTTCTCTACGAGGGTTCT+AGG | + | chr7.1:7733250-7733269 | MS.gene09815:CDS | 45.0% | |
| ATAAGCCTGGACAATAGCAC+GGG | - | chr7.1:7735163-7735182 | None:intergenic | 45.0% | |
| ATTGTATCTTCAGGGGCAAC+AGG | - | chr7.1:7732923-7732942 | None:intergenic | 45.0% | |
| ATTTGTCACACGGAGGAAAC+TGG | + | chr7.1:7732098-7732117 | MS.gene09815:CDS | 45.0% | |
| CAAAAGGTGGAATCCGATGT+TGG | + | chr7.1:7731675-7731694 | MS.gene09815:CDS | 45.0% | |
| CAACGTGCTTCCCAAATTAG+GGG | + | chr7.1:7734401-7734420 | MS.gene09815:intron | 45.0% | |
| CACAACGTGCTTCCCAAATT+AGG | + | chr7.1:7734399-7734418 | MS.gene09815:intron | 45.0% | |
| CACCACCAAAAGGGTGAAAA+GGG | - | chr7.1:7731281-7731300 | None:intergenic | 45.0% | |
| CAGACAGCAACTTCCAATGA+GGG | + | chr7.1:7732548-7732567 | MS.gene09815:CDS | 45.0% | |
| CATCAACAGCACCACCAAAA+GGG | - | chr7.1:7731290-7731309 | None:intergenic | 45.0% | |
| CCATTCCACATCATTCGTAC+CGG | - | chr7.1:7732459-7732478 | None:intergenic | 45.0% | |
| CTCAGAATTAGAGCCAACTG+AGG | + | chr7.1:7731848-7731867 | MS.gene09815:CDS | 45.0% | |
| CTTGCTCAGCAGGATGATTA+TGG | + | chr7.1:7732188-7732207 | MS.gene09815:CDS | 45.0% | |
| GAAGAAGTAGCACCACTGAT+GGG | - | chr7.1:7732344-7732363 | None:intergenic | 45.0% | |
| GACTCAAATGTCCCTGTTGA+AGG | + | chr7.1:7731513-7731532 | MS.gene09815:CDS | 45.0% | |
| GAGAATGTTGTGGACTTGCA+GGG | + | chr7.1:7731768-7731787 | MS.gene09815:CDS | 45.0% | |
| GGAAAAGATTGGAACCAGAC+TGG | + | chr7.1:7734168-7734187 | MS.gene09815:CDS | 45.0% | |
| GTCCTAACAAATTGCTTGCG+AGG | - | chr7.1:7733163-7733182 | None:intergenic | 45.0% | |
| GTTCAAGCAAAGACGTAGGA+GGG | - | chr7.1:7735984-7736003 | None:intergenic | 45.0% | |
| GTTTCCTCCGTGTGACAAAT+AGG | - | chr7.1:7732098-7732117 | None:intergenic | 45.0% | |
| TAGAAATCAGTCCCTTCACC+TGG | - | chr7.1:7731912-7731931 | None:intergenic | 45.0% | |
| TAGAGAGTGAGCTTAAAGCC+TGG | + | chr7.1:7734656-7734675 | MS.gene09815:intron | 45.0% | |
| TATCGGTAATAGTGCTTCCG+GGG | + | chr7.1:7732040-7732059 | MS.gene09815:CDS | 45.0% | |
| TCAGACAGCAACTTCCAATG+AGG | + | chr7.1:7732547-7732566 | MS.gene09815:CDS | 45.0% | |
| TCATTGGAAGTTGCTGTCTG+AGG | - | chr7.1:7732548-7732567 | None:intergenic | 45.0% | |
| TCCTACGTCTTTGCTTGAAC+AGG | + | chr7.1:7735984-7736003 | MS.gene09815:CDS | 45.0% | |
| TGAACACTAATAGGGTGAGG+TGG | + | chr7.1:7735894-7735913 | MS.gene09815:intron | 45.0% | |
| TGAAGAAGTAGCACCACTGA+TGG | - | chr7.1:7732345-7732364 | None:intergenic | 45.0% | |
| TGTTCAAGCAAAGACGTAGG+AGG | - | chr7.1:7735985-7736004 | None:intergenic | 45.0% | |
| TTCCTGACCTTCTCGGTAAA+GGG | - | chr7.1:7735421-7735440 | None:intergenic | 45.0% | |
| TTCTAATCCGGAGGTGATCT+TGG | + | chr7.1:7731791-7731810 | MS.gene09815:CDS | 45.0% | |
| TTGTGGTCACGAACTTAAGG+CGG | + | chr7.1:7732712-7732731 | MS.gene09815:CDS | 45.0% | |
| ! | ACATCAGCTGTTGAAGCATC+CGG | - | chr7.1:7731996-7732015 | None:intergenic | 45.0% |
| ! | CTCCTCGCAAGCAATTTGTT+AGG | + | chr7.1:7733158-7733177 | MS.gene09815:CDS | 45.0% |
| ! | GAAGGGACTGATTTCTACGA+AGG | + | chr7.1:7731915-7731934 | MS.gene09815:CDS | 45.0% |
| ! | GGCAATGAGGAGTTTAGTTC+TGG | + | chr7.1:7731936-7731955 | MS.gene09815:CDS | 45.0% |
| ! | GTATCTTGATAATTCCGGGG+AGG | + | chr7.1:7731449-7731468 | MS.gene09815:CDS | 45.0% |
| ! | GTGATCTTGGTTAGCGTTGA+CGG | + | chr7.1:7731804-7731823 | MS.gene09815:CDS | 45.0% |
| !! | CTAGAAGTGCTTGTTGCATC+TGG | + | chr7.1:7734524-7734543 | MS.gene09815:intron | 45.0% |
| !! | GAGTACGGAAGTGTTGAACA+GGG | - | chr7.1:7733548-7733567 | None:intergenic | 45.0% |
| !! | GGAAGTGTTGAACAGGGATA+AGG | - | chr7.1:7733542-7733561 | None:intergenic | 45.0% |
| !! | GGTTGATAAAGCTGCATCAG+TGG | + | chr7.1:7732406-7732425 | MS.gene09815:CDS | 45.0% |
| !! | TCATAGCGTATCTGATTCGG+GGG | + | chr7.1:7731605-7731624 | MS.gene09815:CDS | 45.0% |
| !! | TGAGTACGGAAGTGTTGAAC+AGG | - | chr7.1:7733549-7733568 | None:intergenic | 45.0% |
| AATCCTGGACCATCTTCGTC+TGG | + | chr7.1:7732983-7733002 | MS.gene09815:CDS | 50.0% | |
| ACGCTAACCAAGATCACCTC+CGG | - | chr7.1:7731801-7731820 | None:intergenic | 50.0% | |
| AGGTGGAATCCGATGTTGGT+CGG | + | chr7.1:7731679-7731698 | MS.gene09815:CDS | 50.0% | |
| CACGAACTTAAGGCGGGTAT+GGG | + | chr7.1:7732719-7732738 | MS.gene09815:CDS | 50.0% | |
| CCGGTACGAATGATGTGGAA+TGG | + | chr7.1:7732456-7732475 | MS.gene09815:CDS | 50.0% | |
| CCTCAATTTCACTTGGGACC+AGG | + | chr7.1:7731891-7731910 | MS.gene09815:CDS | 50.0% | |
| CCTGGTCCCAAGTGAAATTG+AGG | - | chr7.1:7731894-7731913 | None:intergenic | 50.0% | |
| CTATTTGGCAACCTTCGAGC+TGG | - | chr7.1:7732067-7732086 | None:intergenic | 50.0% | |
| GACAGCAACTTCCAATGAGG+GGG | + | chr7.1:7732550-7732569 | MS.gene09815:CDS | 50.0% | |
| GCACCACCAAAAGGGTGAAA+AGG | - | chr7.1:7731282-7731301 | None:intergenic | 50.0% | |
| GCATCAGTGGAAGTTGACAC+TGG | + | chr7.1:7732419-7732438 | MS.gene09815:CDS | 50.0% | |
| GCTTAAAGCCTGGTCAAGTC+TGG | + | chr7.1:7734666-7734685 | MS.gene09815:intron | 50.0% | |
| GGGAAAGGAAATGCAGGTTC+TGG | + | chr7.1:7733669-7733688 | MS.gene09815:intron | 50.0% | |
| GGGCACTCAAAAACAGTAGC+TGG | - | chr7.1:7735143-7735162 | None:intergenic | 50.0% | |
| GGGCAGTTCATGCCTTTAGT+TGG | + | chr7.1:7734147-7734166 | MS.gene09815:CDS | 50.0% | |
| GGTGAATCAAAACTCAGCGG+AGG | + | chr7.1:7732238-7732257 | MS.gene09815:CDS | 50.0% | |
| GGTGAGTTATCTCCCATCAG+TGG | + | chr7.1:7732329-7732348 | MS.gene09815:CDS | 50.0% | |
| GTTCCTGACCTTCTCGGTAA+AGG | - | chr7.1:7735422-7735441 | None:intergenic | 50.0% | |
| TCACGAACTTAAGGCGGGTA+TGG | + | chr7.1:7732718-7732737 | MS.gene09815:CDS | 50.0% | |
| TCGTTCCGGTACGAATGATG+TGG | + | chr7.1:7732451-7732470 | MS.gene09815:CDS | 50.0% | |
| TGACCTTCTCGGTAAAGGGA+CGG | - | chr7.1:7735417-7735436 | None:intergenic | 50.0% | |
| TGGTCCAGGATTATCATCGC+TGG | - | chr7.1:7732975-7732994 | None:intergenic | 50.0% | |
| TGTGGTCACGAACTTAAGGC+GGG | + | chr7.1:7732713-7732732 | MS.gene09815:CDS | 50.0% | |
| TTCACTTGGGACCAGGTGAA+GGG | + | chr7.1:7731898-7731917 | MS.gene09815:CDS | 50.0% | |
| TTTCACTTGGGACCAGGTGA+AGG | + | chr7.1:7731897-7731916 | MS.gene09815:CDS | 50.0% | |
| TTTCCGTCCCTTTACCGAGA+AGG | + | chr7.1:7735411-7735430 | MS.gene09815:CDS | 50.0% | |
| ! | ACCCCTTTTCACCCTTTTGG+TGG | + | chr7.1:7731276-7731295 | MS.gene09815:CDS | 50.0% |
| ! | GAGGGGGATCAAAGCCATTT+TGG | + | chr7.1:7732566-7732585 | MS.gene09815:CDS | 50.0% |
| ! | GCTACCCCTTTTCACCCTTT+TGG | + | chr7.1:7731273-7731292 | MS.gene09815:CDS | 50.0% |
| ! | GGACTTGCAGGGTTCTAATC+CGG | + | chr7.1:7731779-7731798 | MS.gene09815:CDS | 50.0% |
| !! | ACTGGTTCTGGCATTCGTTC+CGG | + | chr7.1:7732437-7732456 | MS.gene09815:CDS | 50.0% |
| !! | ATGGCTTTGATCCCCCTCAT+TGG | - | chr7.1:7732564-7732583 | None:intergenic | 50.0% |
| !! | GAGGGTTCTAGGAACACAAC+AGG | + | chr7.1:7733261-7733280 | MS.gene09815:CDS | 50.0% |
| !! | GTGGAAGTTGACACTGGTTC+TGG | + | chr7.1:7732425-7732444 | MS.gene09815:CDS | 50.0% |
| AACCCATTCTACGCGGGGTT+TGG | + | chr7.1:7735710-7735729 | MS.gene09815:CDS | 55.0% | |
| AGATTGGAACCAGACTGGGG+TGG | + | chr7.1:7734173-7734192 | MS.gene09815:CDS | 55.0% | |
| AGCCATCTCCAACCTCAGGT+AGG | + | chr7.1:7733128-7733147 | MS.gene09815:CDS | 55.0% | |
| AGCCTACCTGAGGTTGGAGA+TGG | - | chr7.1:7733133-7733152 | None:intergenic | 55.0% | |
| AGGAGACTCAAGCCTACCTG+AGG | - | chr7.1:7733143-7733162 | None:intergenic | 55.0% | |
| CACCTACGTCCAGACGAAGA+TGG | - | chr7.1:7732995-7733014 | None:intergenic | 55.0% | |
| CACTCCAAGAACAAGAGGGG+CGG | - | chr7.1:7732879-7732898 | None:intergenic | 55.0% | |
| CATCTTCGTCTGGACGTAGG+TGG | + | chr7.1:7732993-7733012 | MS.gene09815:CDS | 55.0% | |
| CCCTCTTGTTCTTGGAGTGG+CGG | + | chr7.1:7732880-7732899 | MS.gene09815:CDS | 55.0% | |
| CCGCCACTCCAAGAACAAGA+GGG | - | chr7.1:7732883-7732902 | None:intergenic | 55.0% | |
| CGCCACTCCAAGAACAAGAG+GGG | - | chr7.1:7732882-7732901 | None:intergenic | 55.0% | |
| GACCATCTTCGTCTGGACGT+AGG | + | chr7.1:7732990-7733009 | MS.gene09815:CDS | 55.0% | |
| GACTCAAGCCTACCTGAGGT+TGG | - | chr7.1:7733139-7733158 | None:intergenic | 55.0% | |
| GGAGCACGCCTTGGTATGTA+AGG | + | chr7.1:7731343-7731362 | MS.gene09815:CDS | 55.0% | |
| GGCAGGAGGACTTCAACTCT+TGG | + | chr7.1:7736092-7736111 | MS.gene09815:intron | 55.0% | |
| GGGACCTATTTGTCACACGG+AGG | + | chr7.1:7732091-7732110 | MS.gene09815:CDS | 55.0% | |
| GTCCCTTTACCGAGAAGGTC+AGG | + | chr7.1:7735416-7735435 | MS.gene09815:intron | 55.0% | |
| GTTGAGCCATCTCCAACCTC+AGG | + | chr7.1:7733124-7733143 | MS.gene09815:CDS | 55.0% | |
| TCGGGGGCAATTCAGTTGAC+AGG | + | chr7.1:7731621-7731640 | MS.gene09815:CDS | 55.0% | |
| TGCCAAACCCCGCGTAGAAT+GGG | - | chr7.1:7735715-7735734 | None:intergenic | 55.0% | |
| TTGCCAAACCCCGCGTAGAA+TGG | - | chr7.1:7735716-7735735 | None:intergenic | 55.0% | |
| ! | CTTGCAGGGTTCTAATCCGG+AGG | + | chr7.1:7731782-7731801 | MS.gene09815:CDS | 55.0% |
| ! | GAACTTTTCGGAGCACGCCT+TGG | + | chr7.1:7731334-7731353 | MS.gene09815:CDS | 55.0% |
| AAAGCCTTGCCACCCCAGTC+TGG | - | chr7.1:7734185-7734204 | None:intergenic | 60.0% | |
| AAGGCCGCCCCTCTTGTTCT+TGG | + | chr7.1:7732872-7732891 | MS.gene09815:CDS | 60.0% | |
| CGCCCCTCTTGTTCTTGGAG+TGG | + | chr7.1:7732877-7732896 | MS.gene09815:CDS | 60.0% | |
| CGTCCAGACGAAGATGGTCC+AGG | - | chr7.1:7732989-7733008 | None:intergenic | 60.0% | |
| CTGGACGTAGGTGGAGACTC+TGG | + | chr7.1:7733002-7733021 | MS.gene09815:CDS | 60.0% | |
| GCCGCCACTCCAAGAACAAG+AGG | - | chr7.1:7732884-7732903 | None:intergenic | 60.0% | |
| ! | GAGTGCCCGTGCTATTGTCC+AGG | + | chr7.1:7735155-7735174 | MS.gene09815:CDS | 60.0% |
| GCAACCTTCGAGCTGGACCC+CGG | - | chr7.1:7732060-7732079 | None:intergenic | 65.0% | |
| GGAACCAGACTGGGGTGGCA+AGG | + | chr7.1:7734178-7734197 | MS.gene09815:CDS | 65.0% | |
| ! | AGAGGGGCGGCCTTTTCCCA+TGG | - | chr7.1:7732866-7732885 | None:intergenic | 65.0% |
| GCTTCCGGGGTCCAGCTCGA+AGG | + | chr7.1:7732053-7732072 | MS.gene09815:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 7731219 | 7736150 | 7731219 | ID=MS.gene09815 |
| chr7.1 | mRNA | 7731219 | 7736150 | 7731219 | ID=MS.gene09815.t1;Parent=MS.gene09815 |
| chr7.1 | exon | 7731219 | 7732593 | 7731219 | ID=MS.gene09815.t1.exon1;Parent=MS.gene09815.t1 |
| chr7.1 | CDS | 7731219 | 7732593 | 7731219 | ID=cds.MS.gene09815.t1;Parent=MS.gene09815.t1 |
| chr7.1 | exon | 7732696 | 7733282 | 7732696 | ID=MS.gene09815.t1.exon2;Parent=MS.gene09815.t1 |
| chr7.1 | CDS | 7732696 | 7733282 | 7732696 | ID=cds.MS.gene09815.t1;Parent=MS.gene09815.t1 |
| chr7.1 | exon | 7733380 | 7733453 | 7733380 | ID=MS.gene09815.t1.exon3;Parent=MS.gene09815.t1 |
| chr7.1 | CDS | 7733380 | 7733453 | 7733380 | ID=cds.MS.gene09815.t1;Parent=MS.gene09815.t1 |
| chr7.1 | exon | 7734134 | 7734218 | 7734134 | ID=MS.gene09815.t1.exon4;Parent=MS.gene09815.t1 |
| chr7.1 | CDS | 7734134 | 7734218 | 7734134 | ID=cds.MS.gene09815.t1;Parent=MS.gene09815.t1 |
| chr7.1 | exon | 7735129 | 7735215 | 7735129 | ID=MS.gene09815.t1.exon5;Parent=MS.gene09815.t1 |
| chr7.1 | CDS | 7735129 | 7735215 | 7735129 | ID=cds.MS.gene09815.t1;Parent=MS.gene09815.t1 |
| chr7.1 | exon | 7735360 | 7735432 | 7735360 | ID=MS.gene09815.t1.exon6;Parent=MS.gene09815.t1 |
| chr7.1 | CDS | 7735360 | 7735432 | 7735360 | ID=cds.MS.gene09815.t1;Parent=MS.gene09815.t1 |
| chr7.1 | exon | 7735527 | 7735570 | 7735527 | ID=MS.gene09815.t1.exon7;Parent=MS.gene09815.t1 |
| chr7.1 | CDS | 7735527 | 7735570 | 7735527 | ID=cds.MS.gene09815.t1;Parent=MS.gene09815.t1 |
| chr7.1 | exon | 7735680 | 7735808 | 7735680 | ID=MS.gene09815.t1.exon8;Parent=MS.gene09815.t1 |
| chr7.1 | CDS | 7735680 | 7735808 | 7735680 | ID=cds.MS.gene09815.t1;Parent=MS.gene09815.t1 |
| chr7.1 | exon | 7735907 | 7736005 | 7735907 | ID=MS.gene09815.t1.exon9;Parent=MS.gene09815.t1 |
| chr7.1 | CDS | 7735907 | 7736005 | 7735907 | ID=cds.MS.gene09815.t1;Parent=MS.gene09815.t1 |
| chr7.1 | exon | 7736097 | 7736150 | 7736097 | ID=MS.gene09815.t1.exon10;Parent=MS.gene09815.t1 |
| chr7.1 | CDS | 7736097 | 7736150 | 7736097 | ID=cds.MS.gene09815.t1;Parent=MS.gene09815.t1 |
| Gene Sequence |
| Protein sequence |
