Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09987.t1 | XP_013469319.1 | 99 | 392 | 4 | 0 | 1 | 392 | 1 | 392 | 9.60E-229 | 802.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09987.t1 | Q8GYE0 | 64.6 | 373 | 127 | 3 | 4 | 372 | 5 | 376 | 2.6e-142 | 506.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09987.t1 | A0A072VNK4 | 99.0 | 392 | 4 | 0 | 1 | 392 | 1 | 392 | 6.9e-229 | 802.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene09987 | 0.820929 | 5.29E-53 | -1.69E-46 |
| MS.gene053963 | MS.gene09987 | 0.803163 | 3.97E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene09987 | 0.826634 | 2.44E-54 | -1.69E-46 |
| MS.gene054893 | MS.gene09987 | 0.83092 | 2.24E-55 | -1.69E-46 |
| MS.gene054957 | MS.gene09987 | 0.820856 | 5.50E-53 | -1.69E-46 |
| MS.gene057622 | MS.gene09987 | 0.81529 | 9.97E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene09987 | 0.801644 | 8.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09987.t1 | MTR_1g090873 | 98.980 | 392 | 4 | 0 | 1 | 392 | 1 | 392 | 0.0 | 802 |
| MS.gene09987.t1 | MTR_1g090873 | 98.187 | 331 | 6 | 0 | 1 | 331 | 1 | 331 | 0.0 | 668 |
| MS.gene09987.t1 | MTR_4g084650 | 32.424 | 330 | 205 | 8 | 30 | 348 | 72 | 394 | 1.84e-51 | 177 |
| MS.gene09987.t1 | MTR_4g084650 | 33.657 | 309 | 187 | 8 | 30 | 327 | 72 | 373 | 5.27e-50 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09987.t1 | AT3G52190 | 64.267 | 375 | 129 | 3 | 3 | 373 | 4 | 377 | 2.34e-180 | 507 |
| MS.gene09987.t1 | AT5G50550 | 32.673 | 303 | 189 | 9 | 39 | 335 | 65 | 358 | 1.79e-42 | 153 |
| MS.gene09987.t1 | AT5G50650 | 32.673 | 303 | 189 | 9 | 39 | 335 | 65 | 358 | 1.79e-42 | 153 |
| MS.gene09987.t1 | AT2G01470 | 33.673 | 294 | 181 | 9 | 41 | 327 | 76 | 362 | 3.66e-39 | 144 |
Find 111 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTAGCATGCGCATAATTT+TGG | 0.182728 | 1.4:-72250239 | MS.gene09987:CDS |
| ATGAGTTCATGGAACAAAAT+AGG | 0.220715 | 1.4:-72249478 | MS.gene09987:CDS |
| GGAACCAAACCATTTCTATT+TGG | 0.223219 | 1.4:-72249659 | MS.gene09987:CDS |
| CGGACAGATTTGTGTGCTTT+TGG | 0.240942 | 1.4:+72250211 | None:intergenic |
| TCGAGAACTCTGATTCGTTC+TGG | 0.241586 | 1.4:-72247527 | MS.gene09987:CDS |
| AATCTCAACCTAGTTGTTCT+TGG | 0.269966 | 1.4:-72252301 | MS.gene09987:CDS |
| CTCAGCTTCTAACACAAAAT+TGG | 0.284131 | 1.4:+72251326 | None:intergenic |
| AGATAACCTTTCCAATCTTT+AGG | 0.319043 | 1.4:+72248160 | None:intergenic |
| ACACAAATCTGTCCGGGATA+TGG | 0.322553 | 1.4:-72250203 | MS.gene09987:CDS |
| CGAGAACTCTGATTCGTTCT+GGG | 0.331945 | 1.4:-72247526 | MS.gene09987:CDS |
| GTAGACAAAGAAACGGTTAT+AGG | 0.338185 | 1.4:+72252223 | None:intergenic |
| CTGATGGTTCAGCGAGAATC+TGG | 0.344529 | 1.4:-72249883 | MS.gene09987:CDS |
| GGATGGACACCTCAGAATTA+TGG | 0.345586 | 1.4:-72250266 | MS.gene09987:CDS |
| AAATGGTTTGGTTCCATCCT+TGG | 0.346387 | 1.4:+72249667 | None:intergenic |
| CTGTAGAGGGGTTAGTTCCT+TGG | 0.349847 | 1.4:+72250470 | None:intergenic |
| CTCATCATTGGTTTAAACCT+TGG | 0.350046 | 1.4:+72247471 | None:intergenic |
| CTCAGGGTCCGGTTACTTGC+GGG | 0.357610 | 1.4:-72252345 | MS.gene09987:CDS |
| CTATTTGGCGCCGTTCAAAA+AGG | 0.360925 | 1.4:-72249644 | MS.gene09987:intron |
| TTCTTTGTCTACTTCCCCTT+TGG | 0.362793 | 1.4:-72252212 | MS.gene09987:intron |
| CACTAAAAGTAATACATGTC+TGG | 0.366135 | 1.4:+72250436 | None:intergenic |
| GATTGAGGGTCTCTCATCAT+TGG | 0.378056 | 1.4:+72247459 | None:intergenic |
| ATCCATGACCCGCAAGTAAC+CGG | 0.389128 | 1.4:+72252337 | None:intergenic |
| TGCAGATTGTTTGAGCTCTA+TGG | 0.390492 | 1.4:-72250519 | MS.gene09987:intron |
| CTCAATCATTTGATGATCAA+TGG | 0.390908 | 1.4:-72247443 | MS.gene09987:CDS |
| TAAGTCTCTTACAGCGGTTT+GGG | 0.395510 | 1.4:-72249503 | MS.gene09987:CDS |
| TTACTTGCGGGTCATGGATT+CGG | 0.400800 | 1.4:-72252333 | MS.gene09987:CDS |
| ATAAGTCTCTTACAGCGGTT+TGG | 0.404946 | 1.4:-72249504 | MS.gene09987:CDS |
| TGAGTTCATGGAACAAAATA+GGG | 0.405250 | 1.4:-72249477 | MS.gene09987:CDS |
| TCAATCATTTGATGATCAAT+GGG | 0.405468 | 1.4:-72247442 | MS.gene09987:CDS |
| AACTGAATGTACCTAAAGAT+TGG | 0.410490 | 1.4:-72248171 | MS.gene09987:CDS |
| GGTTTAAACCTTGGTCTAGC+TGG | 0.411531 | 1.4:+72247480 | None:intergenic |
| GGCGCCAAATAGAAATGGTT+TGG | 0.423691 | 1.4:+72249655 | None:intergenic |
| CGGTTTGGGATATGAGTTCA+TGG | 0.428050 | 1.4:-72249489 | MS.gene09987:CDS |
| GTCCGGTTACTTGCGGGTCA+TGG | 0.431039 | 1.4:-72252339 | MS.gene09987:CDS |
| GGTGTAGTCTCTTGCTATAA+TGG | 0.431141 | 1.4:+72248467 | None:intergenic |
| TGTAGAGGGGTTAGTTCCTT+GGG | 0.433022 | 1.4:+72250471 | None:intergenic |
| TGAACGGCGCCAAATAGAAA+TGG | 0.434674 | 1.4:+72249650 | None:intergenic |
| ACTTACAACCTCAGTAGAAT+GGG | 0.444696 | 1.4:-72248209 | MS.gene09987:CDS |
| GAGAAAATCTGAAGCAAAGC+AGG | 0.450891 | 1.4:+72252253 | None:intergenic |
| TGCTGGATCACCTCAGGGTC+CGG | 0.464290 | 1.4:-72252356 | MS.gene09987:CDS |
| TAGACAAAGAAACGGTTATA+GGG | 0.466115 | 1.4:+72252224 | None:intergenic |
| GAATGATGCTGGATCACCTC+AGG | 0.466193 | 1.4:-72252362 | MS.gene09987:CDS |
| TACTTACAACCTCAGTAGAA+TGG | 0.468911 | 1.4:-72248210 | MS.gene09987:CDS |
| GGGTGCACAGCAATAGCAAC+CGG | 0.474667 | 1.4:+72251294 | None:intergenic |
| CAAGGAACTAACCCCTCTAC+AGG | 0.483255 | 1.4:-72250469 | MS.gene09987:CDS |
| TTCGTTCTGGGGATTTCCAA+TGG | 0.491126 | 1.4:-72247514 | MS.gene09987:CDS |
| CTCAGTAGAATGGGGAGCAT+TGG | 0.494832 | 1.4:-72248200 | MS.gene09987:CDS |
| CTAACCCCTCTACAGGGTAT+TGG | 0.495022 | 1.4:-72250462 | MS.gene09987:CDS |
| ATATAGGTTCTTACAGAGAA+AGG | 0.496610 | 1.4:+72249395 | None:intergenic |
| CAAAAGCACACAAATCTGTC+CGG | 0.496650 | 1.4:-72250210 | MS.gene09987:CDS |
| CATTGATCATCAAATGATTG+AGG | 0.497207 | 1.4:+72247444 | None:intergenic |
| GGATCTAAATTTGCTGCTGG+TGG | 0.498037 | 1.4:-72250408 | MS.gene09987:CDS |
| CCTCAGGGTCCGGTTACTTG+CGG | 0.499353 | 1.4:-72252346 | MS.gene09987:CDS |
| CGGTACAACTATCGCAACAT+TGG | 0.505371 | 1.4:-72248443 | MS.gene09987:CDS |
| AGGACAAGAATTTCCACGCT+TGG | 0.506092 | 1.4:+72252273 | None:intergenic |
| TCGTTCTGGGGATTTCCAAT+GGG | 0.509999 | 1.4:-72247513 | MS.gene09987:CDS |
| CTAGCTTCAACTTCTACTGA+TGG | 0.515435 | 1.4:-72249899 | MS.gene09987:CDS |
| GATGGATCTAAATTTGCTGC+TGG | 0.516767 | 1.4:-72250411 | MS.gene09987:CDS |
| ATTGATCATCAAATGATTGA+GGG | 0.517917 | 1.4:+72247445 | None:intergenic |
| TGCAGAGTGGCAGATATACT+TGG | 0.519271 | 1.4:-72247598 | MS.gene09987:intron |
| TCCAAAATTATGCGCATGCT+AGG | 0.524567 | 1.4:+72250238 | None:intergenic |
| ACTAAAAGTAATACATGTCT+GGG | 0.525288 | 1.4:+72250437 | None:intergenic |
| AGAAGCTGAGGAAGGTGATC+CGG | 0.530482 | 1.4:-72251313 | MS.gene09987:CDS |
| GAGAACTCTGATTCGTTCTG+GGG | 0.533273 | 1.4:-72247525 | MS.gene09987:CDS |
| TGGATTTCTGTCCTAGTGAA+AGG | 0.533688 | 1.4:-72248423 | MS.gene09987:intron |
| TCAACCTAGTTGTTCTTGGA+AGG | 0.537175 | 1.4:-72252297 | MS.gene09987:CDS |
| TAATGGCCGTTAGCCACGAC+GGG | 0.539256 | 1.4:-72249423 | MS.gene09987:CDS |
| AGACGCGGTCACATATCTAC+TGG | 0.544878 | 1.4:+72247417 | None:intergenic |
| ATTTGGATGGAGAATGATGC+TGG | 0.544930 | 1.4:-72252373 | None:intergenic |
| TGGACCTTCCAAGAACAACT+AGG | 0.547578 | 1.4:+72252293 | None:intergenic |
| TGTACCTAAAATCCATATCC+CGG | 0.552105 | 1.4:+72250191 | None:intergenic |
| GATCTAAATTTGCTGCTGGT+GGG | 0.552966 | 1.4:-72250407 | MS.gene09987:CDS |
| GTATTTCCCGTCGTGGCTAA+CGG | 0.556419 | 1.4:+72249417 | None:intergenic |
| TAGAAAGTCTGCTTCAGTAA+TGG | 0.572648 | 1.4:-72249440 | MS.gene09987:CDS |
| GGAACAAAATAGGGCACAAG+AGG | 0.574914 | 1.4:-72249468 | MS.gene09987:CDS |
| AGAAACGGTTATAGGGTCAA+AGG | 0.575993 | 1.4:+72252231 | None:intergenic |
| AAAAGCACACAAATCTGTCC+GGG | 0.581294 | 1.4:-72250209 | MS.gene09987:CDS |
| CACATAAAATCATCACCGCT+AGG | 0.583548 | 1.4:+72251273 | None:intergenic |
| GACCACTCTGTCTCGCAACT+CGG | 0.583764 | 1.4:-72249837 | MS.gene09987:intron |
| TAAATTTGCTGCTGGTGGGT+CGG | 0.586472 | 1.4:-72250403 | MS.gene09987:intron |
| GTGGATATTTACCTTTCACT+AGG | 0.590688 | 1.4:+72248412 | None:intergenic |
| GGGAACCAATACCCTGTAGA+GGG | 0.595092 | 1.4:+72250457 | None:intergenic |
| AGGGGATAAGTCTCTTACAG+CGG | 0.605985 | 1.4:-72249509 | MS.gene09987:CDS |
| TTTATGTGCTCTTTGAGCAA+TGG | 0.610268 | 1.4:-72251258 | MS.gene09987:CDS |
| TTGCGAGACAGAGTGGTCAC+AGG | 0.610478 | 1.4:+72249842 | None:intergenic |
| AGGGGAAGTAGACAAAGAAA+CGG | 0.613448 | 1.4:+72252216 | None:intergenic |
| AATGTACCTAAAGATTGGAA+AGG | 0.615590 | 1.4:-72248166 | MS.gene09987:intron |
| ACATAAAATCATCACCGCTA+GGG | 0.616388 | 1.4:+72251274 | None:intergenic |
| TGGGAACCAATACCCTGTAG+AGG | 0.620085 | 1.4:+72250456 | None:intergenic |
| TTTGTGTTAGAAGCTGAGGA+AGG | 0.624346 | 1.4:-72251321 | MS.gene09987:CDS |
| GTAATGGCCGTTAGCCACGA+CGG | 0.633207 | 1.4:-72249424 | MS.gene09987:CDS |
| AGAATCTGGAAGGTTGAAGA+CGG | 0.646935 | 1.4:-72249869 | MS.gene09987:CDS |
| GAGAAAGGTATTTCCCGTCG+TGG | 0.646943 | 1.4:+72249410 | None:intergenic |
| AAACATGAAACTGTTGCCCA+AGG | 0.647320 | 1.4:-72250487 | MS.gene09987:CDS |
| GTTCTTGGAAGGTCCAAGCG+TGG | 0.648572 | 1.4:-72252286 | MS.gene09987:CDS |
| AAAATCAACCAGCTAGACCA+AGG | 0.649835 | 1.4:-72247488 | MS.gene09987:CDS |
| CAATGCTCCCCATTCTACTG+AGG | 0.662088 | 1.4:+72248201 | None:intergenic |
| TAGGCCACTCCATAATTCTG+AGG | 0.667952 | 1.4:+72250257 | None:intergenic |
| TGGTTCAGCGAGAATCTGGA+AGG | 0.668492 | 1.4:-72249879 | MS.gene09987:CDS |
| TACCGAGTTGCGAGACAGAG+TGG | 0.677017 | 1.4:+72249835 | None:intergenic |
| AAGGAACTAACCCCTCTACA+GGG | 0.679695 | 1.4:-72250468 | MS.gene09987:CDS |
| GACACCTCAGAATTATGGAG+TGG | 0.680012 | 1.4:-72250261 | MS.gene09987:CDS |
| AATGATGCTGGATCACCTCA+GGG | 0.681405 | 1.4:-72252361 | MS.gene09987:CDS |
| CCGCAAGTAACCGGACCCTG+AGG | 0.684658 | 1.4:+72252346 | None:intergenic |
| GGAACCAATACCCTGTAGAG+GGG | 0.704785 | 1.4:+72250458 | None:intergenic |
| GCTATTGCTGTGCACCCTAG+CGG | 0.708254 | 1.4:-72251288 | MS.gene09987:CDS |
| CAATCATTTGATGATCAATG+GGG | 0.709097 | 1.4:-72247441 | MS.gene09987:CDS |
| CTTACAACCTCAGTAGAATG+GGG | 0.712274 | 1.4:-72248208 | MS.gene09987:CDS |
| ATTGAAGAGGAATACCAAAG+GGG | 0.723778 | 1.4:+72252198 | None:intergenic |
| ATGTTGCGATAGTTGTACCG+AGG | 0.735547 | 1.4:+72248446 | None:intergenic |
| TATAGCAAGAGACTACACCT+CGG | 0.778640 | 1.4:-72248463 | MS.gene09987:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAATTAATTTTTATAT+TGG | + | chr1.4:72248968-72248987 | None:intergenic | 0.0% |
| !! | TTCTAAACTTAAAATAAAAA+GGG | + | chr1.4:72247690-72247709 | None:intergenic | 10.0% |
| !! | TTTCTAAACTTAAAATAAAA+AGG | + | chr1.4:72247691-72247710 | None:intergenic | 10.0% |
| !! | ATATAAGTATTTATGCTATA+AGG | + | chr1.4:72247798-72247817 | None:intergenic | 15.0% |
| !! | TATAAGTATTTATGCTATAA+GGG | + | chr1.4:72247797-72247816 | None:intergenic | 15.0% |
| !! | TTAAACATATTTAAGTCATT+TGG | - | chr1.4:72250446-72250465 | MS.gene09987:CDS | 15.0% |
| !!! | AAAAAGAAAATTTTGGATAA+AGG | + | chr1.4:72250067-72250086 | None:intergenic | 15.0% |
| !!! | AAAAGAAAATTTTGGATAAA+GGG | + | chr1.4:72250066-72250085 | None:intergenic | 15.0% |
| !!! | AGTTTACCTTTTAAAATAAT+TGG | + | chr1.4:72251188-72251207 | None:intergenic | 15.0% |
| !!! | ATTAGTCCAATTATTTTAAA+AGG | - | chr1.4:72251179-72251198 | MS.gene09987:intron | 15.0% |
| !!! | ATTATTTCTGTTATATTCTA+TGG | + | chr1.4:72251715-72251734 | None:intergenic | 15.0% |
| !!! | TTAATTTTAAACACAAATTG+TGG | + | chr1.4:72251948-72251967 | None:intergenic | 15.0% |
| !!! | TTTATGTGAGTTTTTTAAAA+AGG | - | chr1.4:72250759-72250778 | MS.gene09987:intron | 15.0% |
| !!! | TTTTTCAAAAATGATATTGA+GGG | - | chr1.4:72249007-72249026 | MS.gene09987:intron | 15.0% |
| !!! | TTTTTTCAAAAATGATATTG+AGG | - | chr1.4:72249006-72249025 | MS.gene09987:intron | 15.0% |
| !! | AAAAACTGTGCAAAAAAATT+TGG | + | chr1.4:72248779-72248798 | None:intergenic | 20.0% |
| !! | AAAACTATAATTGTAAGGAA+AGG | + | chr1.4:72250696-72250715 | None:intergenic | 20.0% |
| !! | AAACTATATGTATATGTATG+TGG | - | chr1.4:72247621-72247640 | MS.gene09987:intron | 20.0% |
| !! | AACAAAAATCAACATCAATT+CGG | - | chr1.4:72251753-72251772 | MS.gene09987:intron | 20.0% |
| !! | AACAAATTTCGAAAACAATA+TGG | + | chr1.4:72252098-72252117 | None:intergenic | 20.0% |
| !! | AACTATATGTATATGTATGT+GGG | - | chr1.4:72247622-72247641 | MS.gene09987:intron | 20.0% |
| !! | ATTCCAAAACTATAATTGTA+AGG | + | chr1.4:72250701-72250720 | None:intergenic | 20.0% |
| !! | CAAATTGAATTTGAATTGTT+TGG | - | chr1.4:72248917-72248936 | MS.gene09987:intron | 20.0% |
| !! | TAAAAGTTTAAAAAATGCAG+TGG | - | chr1.4:72251473-72251492 | MS.gene09987:intron | 20.0% |
| !! | TTTCATGAAATATTTGAGAA+GGG | - | chr1.4:72250813-72250832 | MS.gene09987:intron | 20.0% |
| !!! | AAAGAAAATTTTGGATAAAG+GGG | + | chr1.4:72250065-72250084 | None:intergenic | 20.0% |
| !!! | AAGAGACAAAAAGAAAATTT+TGG | + | chr1.4:72250074-72250093 | None:intergenic | 20.0% |
| !!! | AATTTTCTTTTTGTCTCTTT+AGG | - | chr1.4:72250075-72250094 | MS.gene09987:intron | 20.0% |
| !!! | AGCTTTTATTATTTTATGCA+GGG | - | chr1.4:72251556-72251575 | MS.gene09987:intron | 20.0% |
| !!! | ATTAGAATTTAGAATTCTAC+TGG | + | chr1.4:72249682-72249701 | None:intergenic | 20.0% |
| !!! | ATTGTCCTTTAAAAAGTTAA+AGG | + | chr1.4:72248733-72248752 | None:intergenic | 20.0% |
| !!! | CATAGTTTTGTAAATATTAG+TGG | - | chr1.4:72251132-72251151 | MS.gene09987:intron | 20.0% |
| !!! | GGTATAGTCTTTTTTATTTA+AGG | - | chr1.4:72249976-72249995 | MS.gene09987:intron | 20.0% |
| !!! | TAAACTTTTGTGAGATTATT+AGG | + | chr1.4:72248072-72248091 | None:intergenic | 20.0% |
| !!! | TAGTTTTGGAATTGTTTATA+AGG | - | chr1.4:72250709-72250728 | MS.gene09987:intron | 20.0% |
| !!! | TTTCCTTACAATTATAGTTT+TGG | - | chr1.4:72250695-72250714 | MS.gene09987:intron | 20.0% |
| !!! | TTTTCATGAAATATTTGAGA+AGG | - | chr1.4:72250812-72250831 | MS.gene09987:intron | 20.0% |
| ! | AAAGCTACTACTTTAAGTAA+CGG | - | chr1.4:72248679-72248698 | MS.gene09987:intron | 25.0% |
| ! | AATGGTTAATGAATATGACA+TGG | - | chr1.4:72251822-72251841 | MS.gene09987:intron | 25.0% |
| ! | AATTAGAAATGAGCATCATA+AGG | + | chr1.4:72250637-72250656 | None:intergenic | 25.0% |
| ! | AATTTCGAAAACAATATGGA+TGG | + | chr1.4:72252094-72252113 | None:intergenic | 25.0% |
| ! | ACAGCATAAAAACAATTTGT+TGG | + | chr1.4:72249433-72249452 | None:intergenic | 25.0% |
| ! | ACTAAAAGTAATACATGTCT+GGG | + | chr1.4:72249358-72249377 | None:intergenic | 25.0% |
| ! | ATATAGTTTGAGAATTGAAG+AGG | + | chr1.4:72247610-72247629 | None:intergenic | 25.0% |
| ! | ATTATTCATAAAAGAGAGCA+AGG | + | chr1.4:72248603-72248622 | None:intergenic | 25.0% |
| ! | ATTGATCATCAAATGATTGA+GGG | + | chr1.4:72252350-72252369 | None:intergenic | 25.0% |
| ! | CTACTCTTAAGAAATAAGTA+CGG | + | chr1.4:72249196-72249215 | None:intergenic | 25.0% |
| ! | GATGGTTAATGAATATAACA+AGG | + | chr1.4:72252035-72252054 | None:intergenic | 25.0% |
| ! | GCATAAAATAATAAAAGCTC+AGG | + | chr1.4:72251555-72251574 | None:intergenic | 25.0% |
| ! | TAAACATTCGTGAGATTATT+AGG | + | chr1.4:72248183-72248202 | None:intergenic | 25.0% |
| ! | TAAGCATTTGTGAGATTATT+AGG | + | chr1.4:72247956-72247975 | None:intergenic | 25.0% |
| ! | TAATCATGATTAAGTCATCT+AGG | - | chr1.4:72250535-72250554 | MS.gene09987:intron | 25.0% |
| ! | TATTTAAGCTATAAGCTGTA+AGG | - | chr1.4:72248098-72248117 | MS.gene09987:intron | 25.0% |
| ! | TTGAGCAAAAGAAAATGATT+TGG | + | chr1.4:72250573-72250592 | None:intergenic | 25.0% |
| !! | ATCAGATCTCTGTAATTTTA+GGG | - | chr1.4:72251250-72251269 | MS.gene09987:CDS | 25.0% |
| !! | GTGTATGACATAATAGTTTT+AGG | - | chr1.4:72248825-72248844 | MS.gene09987:intron | 25.0% |
| !! | TCAATCATTTGATGATCAAT+GGG | - | chr1.4:72252350-72252369 | MS.gene09987:CDS | 25.0% |
| !! | TGGATTTGAACAAATACTTT+TGG | - | chr1.4:72250925-72250944 | MS.gene09987:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | + | chr1.4:72247769-72247788 | None:intergenic | 25.0% |
| !!! | AAAATGATTTGGTAATCTCT+AGG | + | chr1.4:72250562-72250581 | None:intergenic | 25.0% |
| !!! | ATCATGTTTATTTTATCACG+TGG | + | chr1.4:72251916-72251935 | None:intergenic | 25.0% |
| !!! | CTGTTCCTTTAACTTTTTAA+AGG | - | chr1.4:72248725-72248744 | MS.gene09987:intron | 25.0% |
| !!! | CTTTTTTATTTAAGGACCTT+TGG | - | chr1.4:72249984-72250003 | MS.gene09987:intron | 25.0% |
| !!! | GAGAAAGTTATAGCTATTTT+AGG | - | chr1.4:72250789-72250808 | MS.gene09987:intron | 25.0% |
| !!! | GAGCTTTTATTATTTTATGC+AGG | - | chr1.4:72251555-72251574 | MS.gene09987:intron | 25.0% |
| !!! | TGGTTTTAATCTTGAGTTTT+TGG | - | chr1.4:72248376-72248395 | MS.gene09987:intron | 25.0% |
| !!! | TGTATTACTTTTAGTGTTGA+TGG | - | chr1.4:72249363-72249382 | MS.gene09987:intron | 25.0% |
| AAAATCAACATCAATTCGGA+TGG | - | chr1.4:72251757-72251776 | MS.gene09987:intron | 30.0% | |
| AACTGAATGTACCTAAAGAT+TGG | - | chr1.4:72251621-72251640 | MS.gene09987:intron | 30.0% | |
| AAGACAGAAGTAAAACATAC+AGG | + | chr1.4:72249495-72249514 | None:intergenic | 30.0% | |
| AATGAACACCTGAAAAATCA+TGG | - | chr1.4:72251967-72251986 | MS.gene09987:intron | 30.0% | |
| AATGTACCTAAAGATTGGAA+AGG | - | chr1.4:72251626-72251645 | MS.gene09987:intron | 30.0% | |
| AATTGAAGAGGAATACCAAA+GGG | + | chr1.4:72247598-72247617 | None:intergenic | 30.0% | |
| AGATAACCTTTCCAATCTTT+AGG | + | chr1.4:72251635-72251654 | None:intergenic | 30.0% | |
| AGGATTTATGTTCGAATTGA+CGG | + | chr1.4:72251092-72251111 | None:intergenic | 30.0% | |
| ATATAGGTTCTTACAGAGAA+AGG | + | chr1.4:72250400-72250419 | None:intergenic | 30.0% | |
| ATGAGTTCATGGAACAAAAT+AGG | - | chr1.4:72250314-72250333 | MS.gene09987:intron | 30.0% | |
| ATTTCTCAGCTAAAACCAAA+AGG | + | chr1.4:72248291-72248310 | None:intergenic | 30.0% | |
| CAAAACAATTGATATGTGCA+AGG | + | chr1.4:72250426-72250445 | None:intergenic | 30.0% | |
| CACTAAAAGTAATACATGTC+TGG | + | chr1.4:72249359-72249378 | None:intergenic | 30.0% | |
| CATTGATCATCAAATGATTG+AGG | + | chr1.4:72252351-72252370 | None:intergenic | 30.0% | |
| GATATGTGCAAGGTAAATAT+AGG | + | chr1.4:72250416-72250435 | None:intergenic | 30.0% | |
| GCTTATATGTTATAAGCTTG+CGG | - | chr1.4:72249150-72249169 | MS.gene09987:intron | 30.0% | |
| GGCCTAAAATTTCAATCTAT+TGG | - | chr1.4:72251494-72251513 | MS.gene09987:intron | 30.0% | |
| GTGTGGTTAATTACATTTAG+CGG | - | chr1.4:72251989-72252008 | MS.gene09987:intron | 30.0% | |
| GTTAAAGGAACAGAAAATGT+TGG | + | chr1.4:72248718-72248737 | None:intergenic | 30.0% | |
| GTTAATGTCGTTCAAATATG+TGG | - | chr1.4:72251783-72251802 | MS.gene09987:intron | 30.0% | |
| TAAACACAAATTGTGGTCAA+TGG | + | chr1.4:72251941-72251960 | None:intergenic | 30.0% | |
| TAGACAAAGAAACGGTTATA+GGG | + | chr1.4:72247571-72247590 | None:intergenic | 30.0% | |
| TATATTCTATGGTCTCAGAA+AGG | + | chr1.4:72251704-72251723 | None:intergenic | 30.0% | |
| TATCCCCTAATCAAAATTAG+AGG | + | chr1.4:72250271-72250290 | None:intergenic | 30.0% | |
| TATGCCTGTATATAACCTAT+AGG | - | chr1.4:72247974-72247993 | MS.gene09987:intron | 30.0% | |
| TCAAGTATGACCTTAATCAT+TGG | - | chr1.4:72250243-72250262 | MS.gene09987:CDS | 30.0% | |
| TCACGAATGTTTATACAAGT+AGG | - | chr1.4:72248190-72248209 | MS.gene09987:CDS | 30.0% | |
| TGAAGTAGAACTGTTAGTAA+CGG | + | chr1.4:72249121-72249140 | None:intergenic | 30.0% | |
| TGACAAAACGAAAGACAATA+CGG | + | chr1.4:72249849-72249868 | None:intergenic | 30.0% | |
| TGAGTTCATGGAACAAAATA+GGG | - | chr1.4:72250315-72250334 | MS.gene09987:intron | 30.0% | |
| TTGACTATAACGATTCTGAA+AGG | + | chr1.4:72251112-72251131 | None:intergenic | 30.0% | |
| TTGCAGTTGTATATAGACTA+TGG | - | chr1.4:72247743-72247762 | MS.gene09987:intron | 30.0% | |
| TTTAAGTCATTTGGATAGCA+AGG | - | chr1.4:72250455-72250474 | MS.gene09987:CDS | 30.0% | |
| TTTATTTAAGGACCTTTGGA+AGG | - | chr1.4:72249988-72250007 | MS.gene09987:intron | 30.0% | |
| TTTCTCAGCTAAAACCAAAA+GGG | + | chr1.4:72248290-72248309 | None:intergenic | 30.0% | |
| TTTGTCATATCTCAGAACTA+AGG | - | chr1.4:72250874-72250893 | MS.gene09987:intron | 30.0% | |
| ! | ACGATTGTGAATGTGTTTTA+TGG | + | chr1.4:72251681-72251700 | None:intergenic | 30.0% |
| ! | ACTAAGAGAACTGGTTTATT+AGG | + | chr1.4:72251520-72251539 | None:intergenic | 30.0% |
| ! | AGATGAATGCATCTTTTAGA+AGG | + | chr1.4:72249653-72249672 | None:intergenic | 30.0% |
| ! | ATCATTCATGAACACACTTT+TGG | - | chr1.4:72251428-72251447 | MS.gene09987:intron | 30.0% |
| ! | CAATCATTTGATGATCAATG+GGG | - | chr1.4:72252351-72252370 | MS.gene09987:CDS | 30.0% |
| ! | CATCAGATCTCTGTAATTTT+AGG | - | chr1.4:72251249-72251268 | MS.gene09987:CDS | 30.0% |
| ! | CTAATTTTATCTGTGATGCA+CGG | + | chr1.4:72251164-72251183 | None:intergenic | 30.0% |
| ! | CTCAATCATTTGATGATCAA+TGG | - | chr1.4:72252349-72252368 | MS.gene09987:CDS | 30.0% |
| ! | GATACTCATACCTTTTTGAA+CGG | + | chr1.4:72250161-72250180 | None:intergenic | 30.0% |
| ! | GGCCAATAGATTGAAATTTT+AGG | + | chr1.4:72251499-72251518 | None:intergenic | 30.0% |
| ! | TCATTCATGAACACACTTTT+GGG | - | chr1.4:72251429-72251448 | MS.gene09987:intron | 30.0% |
| ! | TTTAGCGGATGATTAATGAT+TGG | - | chr1.4:72252004-72252023 | MS.gene09987:intron | 30.0% |
| ! | TTTTTCCTGAACAAGATTGT+TGG | - | chr1.4:72248314-72248333 | MS.gene09987:intron | 30.0% |
| !! | AACAACTAGGTTGAGATTTT+CGG | + | chr1.4:72247489-72247508 | None:intergenic | 30.0% |
| !! | ATAATTCTGCTTTTGAAGAG+TGG | - | chr1.4:72248356-72248375 | MS.gene09987:intron | 30.0% |
| !! | ATTAGAGGTACCAATGATTA+AGG | + | chr1.4:72250256-72250275 | None:intergenic | 30.0% |
| !! | GAGTTTTTGGATCATGTAAT+TGG | - | chr1.4:72248389-72248408 | MS.gene09987:intron | 30.0% |
| !! | TTATTTTGTGCATTCCCTTT+TGG | - | chr1.4:72248273-72248292 | MS.gene09987:intron | 30.0% |
| !!! | AATTGTTTTTATGCTGTGTG+TGG | - | chr1.4:72249436-72249455 | MS.gene09987:CDS | 30.0% |
| !!! | AATTTTAGGGCAAGTAAAGA+TGG | - | chr1.4:72251263-72251282 | MS.gene09987:CDS | 30.0% |
| !!! | AGATATACTTGGTGCTTTTA+GGG | - | chr1.4:72252205-72252224 | MS.gene09987:intron | 30.0% |
| !!! | GGTACCTCTAATTTTGATTA+GGG | - | chr1.4:72250264-72250283 | MS.gene09987:CDS | 30.0% |
| !!! | GTACCTCTAATTTTGATTAG+GGG | - | chr1.4:72250265-72250284 | MS.gene09987:CDS | 30.0% |
| !!! | TAATAGTTTTAGGCTCAGTT+TGG | - | chr1.4:72248835-72248854 | MS.gene09987:intron | 30.0% |
| !!! | TGAATTATGTCGATTTTCCA+AGG | - | chr1.4:72250108-72250127 | MS.gene09987:intron | 30.0% |
| !!! | TGGTACCTCTAATTTTGATT+AGG | - | chr1.4:72250263-72250282 | MS.gene09987:CDS | 30.0% |
| !!! | TTTAGGGCTATTTTTAGTGT+CGG | - | chr1.4:72252221-72252240 | MS.gene09987:CDS | 30.0% |
| AAATCTTCAGATCCTTCCAA+AGG | + | chr1.4:72250003-72250022 | None:intergenic | 35.0% | |
| AATCTAAACCATAGAACTCG+AGG | + | chr1.4:72249234-72249253 | None:intergenic | 35.0% | |
| AATCTCAACCTAGTTGTTCT+TGG | - | chr1.4:72247491-72247510 | MS.gene09987:CDS | 35.0% | |
| ACAGCCTATAGGTTATATAC+AGG | + | chr1.4:72247981-72248000 | None:intergenic | 35.0% | |
| ACAGTTTATGAACATGCCAT+AGG | - | chr1.4:72247926-72247945 | MS.gene09987:intron | 35.0% | |
| ACATAAAATCATCACCGCTA+GGG | + | chr1.4:72248521-72248540 | None:intergenic | 35.0% | |
| ACTTACAACCTCAGTAGAAT+GGG | - | chr1.4:72251583-72251602 | MS.gene09987:intron | 35.0% | |
| AGATATGACAAACATGGCAT+GGG | + | chr1.4:72250866-72250885 | None:intergenic | 35.0% | |
| AGCTCAAGATTATACAAGCA+AGG | + | chr1.4:72251229-72251248 | None:intergenic | 35.0% | |
| ATATAGACTATGGCCATGTT+TGG | - | chr1.4:72247753-72247772 | MS.gene09987:intron | 35.0% | |
| ATTGAAGAGGAATACCAAAG+GGG | + | chr1.4:72247597-72247616 | None:intergenic | 35.0% | |
| CTCAGCTTCTAACACAAAAT+TGG | + | chr1.4:72248469-72248488 | None:intergenic | 35.0% | |
| CTCCTTAGTCTAATTATTGC+AGG | + | chr1.4:72249746-72249765 | None:intergenic | 35.0% | |
| GAATTGAAGAGGAATACCAA+AGG | + | chr1.4:72247599-72247618 | None:intergenic | 35.0% | |
| GGAACCAAACCATTTCTATT+TGG | - | chr1.4:72250133-72250152 | MS.gene09987:intron | 35.0% | |
| GTAGACAAAGAAACGGTTAT+AGG | + | chr1.4:72247572-72247591 | None:intergenic | 35.0% | |
| GTGGATATTTACCTTTCACT+AGG | + | chr1.4:72251383-72251402 | None:intergenic | 35.0% | |
| TAAACCAGTTCTCTTAGTCT+TGG | - | chr1.4:72251522-72251541 | MS.gene09987:intron | 35.0% | |
| TACTTACAACCTCAGTAGAA+TGG | - | chr1.4:72251582-72251601 | MS.gene09987:intron | 35.0% | |
| TAGAAAGTCTGCTTCAGTAA+TGG | - | chr1.4:72250352-72250371 | MS.gene09987:intron | 35.0% | |
| TAGCTTATGATACAGCCTAT+AGG | + | chr1.4:72247992-72248011 | None:intergenic | 35.0% | |
| TAGTCTAATTATTGCAGGCA+CGG | + | chr1.4:72249741-72249760 | None:intergenic | 35.0% | |
| TATGTTATAAGCTTGCGGTT+TGG | - | chr1.4:72249155-72249174 | MS.gene09987:intron | 35.0% | |
| TCGAAAACAATATGGATGGT+TGG | + | chr1.4:72252090-72252109 | None:intergenic | 35.0% | |
| TGAAAGGTAAATATCCACAC+TGG | - | chr1.4:72251385-72251404 | MS.gene09987:intron | 35.0% | |
| TGAAATAAGTCGATCCAAAC+AGG | - | chr1.4:72248218-72248237 | MS.gene09987:CDS | 35.0% | |
| TGCCTGCAATAATTAGACTA+AGG | - | chr1.4:72249741-72249760 | MS.gene09987:intron | 35.0% | |
| TGTACCTAAAATCCATATCC+CGG | + | chr1.4:72249604-72249623 | None:intergenic | 35.0% | |
| TGTATTGCCAAAACTGTGAA+GGG | - | chr1.4:72250489-72250508 | MS.gene09987:CDS | 35.0% | |
| TTGGGCTGTTCAATTTGATA+TGG | - | chr1.4:72250905-72250924 | MS.gene09987:intron | 35.0% | |
| TTGTATTGCCAAAACTGTGA+AGG | - | chr1.4:72250488-72250507 | MS.gene09987:CDS | 35.0% | |
| TTTATGTGCTCTTTGAGCAA+TGG | - | chr1.4:72248534-72248553 | MS.gene09987:intron | 35.0% | |
| ! | AGAACTAAGGCTTCTCTTTT+GGG | - | chr1.4:72250887-72250906 | MS.gene09987:intron | 35.0% |
| ! | AGCTTCTTTTCTAATAGCCA+TGG | - | chr1.4:72248569-72248588 | MS.gene09987:intron | 35.0% |
| ! | ATATTTTGCCTCGAGTTCTA+TGG | - | chr1.4:72249223-72249242 | MS.gene09987:intron | 35.0% |
| ! | ATGTGGTTAGTTACGTTTCA+TGG | + | chr1.4:72252057-72252076 | None:intergenic | 35.0% |
| ! | ATTTTATCACGTGGAGATGA+CGG | + | chr1.4:72251907-72251926 | None:intergenic | 35.0% |
| ! | CAATTTTGTGTTAGAAGCTG+AGG | - | chr1.4:72248467-72248486 | MS.gene09987:CDS | 35.0% |
| ! | CATTCATGAACACACTTTTG+GGG | - | chr1.4:72251430-72251449 | MS.gene09987:intron | 35.0% |
| ! | CTATAAGCTGTAAGGTATTC+TGG | - | chr1.4:72248106-72248125 | MS.gene09987:intron | 35.0% |
| ! | GCTTCTTTTCTAATAGCCAT+GGG | - | chr1.4:72248570-72248589 | MS.gene09987:intron | 35.0% |
| ! | TAACCACACCATGATTTTTC+AGG | + | chr1.4:72251978-72251997 | None:intergenic | 35.0% |
| ! | TGGTTGGTGCAATTTAAATG+TGG | + | chr1.4:72252074-72252093 | None:intergenic | 35.0% |
| ! | TGTTCTTATTTCCTTGAGCT+AGG | - | chr1.4:72248799-72248818 | MS.gene09987:intron | 35.0% |
| ! | TGTTTGGATCGACTTATTTC+AGG | + | chr1.4:72248219-72248238 | None:intergenic | 35.0% |
| !! | ACAACTAGGTTGAGATTTTC+GGG | + | chr1.4:72247488-72247507 | None:intergenic | 35.0% |
| !! | CTCATCATTGGTTTAAACCT+TGG | + | chr1.4:72252324-72252343 | None:intergenic | 35.0% |
| !! | GTTCTGAGATATGACAAACA+TGG | + | chr1.4:72250872-72250891 | None:intergenic | 35.0% |
| !! | TAATCAAAAAGGTACCAGTG+TGG | + | chr1.4:72251402-72251421 | None:intergenic | 35.0% |
| !!! | CAGATATACTTGGTGCTTTT+AGG | - | chr1.4:72252204-72252223 | MS.gene09987:intron | 35.0% |
| !!! | TTATGTCGATTTTCCAAGGA+TGG | - | chr1.4:72250112-72250131 | MS.gene09987:intron | 35.0% |
| AAAATCAACCAGCTAGACCA+AGG | - | chr1.4:72252304-72252323 | MS.gene09987:CDS | 40.0% | |
| AAACATGAAACTGTTGCCCA+AGG | - | chr1.4:72249305-72249324 | MS.gene09987:intron | 40.0% | |
| AAGTCATTTGGATAGCAAGG+TGG | - | chr1.4:72250458-72250477 | MS.gene09987:CDS | 40.0% | |
| ACACCTGAAAAATCATGGTG+TGG | - | chr1.4:72251972-72251991 | MS.gene09987:intron | 40.0% | |
| ACTGTCCATTGAACGTGATT+AGG | - | chr1.4:72251860-72251879 | MS.gene09987:intron | 40.0% | |
| AGAAACGGTTATAGGGTCAA+AGG | + | chr1.4:72247564-72247583 | None:intergenic | 40.0% | |
| AGAATCTGGAAGGTTGAAGA+CGG | - | chr1.4:72249923-72249942 | MS.gene09987:intron | 40.0% | |
| AGCGGATGATTAATGATTGG+TGG | - | chr1.4:72252007-72252026 | MS.gene09987:intron | 40.0% | |
| AGGGGAAGTAGACAAAGAAA+CGG | + | chr1.4:72247579-72247598 | None:intergenic | 40.0% | |
| ATAAGTCTCTTACAGCGGTT+TGG | - | chr1.4:72250288-72250307 | MS.gene09987:intron | 40.0% | |
| ATAGCCAAGACTAAGAGAAC+TGG | + | chr1.4:72251529-72251548 | None:intergenic | 40.0% | |
| ATTTGGTACAACTGAGCATG+CGG | + | chr1.4:72248762-72248781 | None:intergenic | 40.0% | |
| CAATGTCATCAAGGTTTCAC+AGG | + | chr1.4:72249819-72249838 | None:intergenic | 40.0% | |
| CACATAAAATCATCACCGCT+AGG | + | chr1.4:72248522-72248541 | None:intergenic | 40.0% | |
| CTACTACTTTAAGTAACGGC+AGG | - | chr1.4:72248683-72248702 | MS.gene09987:intron | 40.0% | |
| CTAGCTTCAACTTCTACTGA+TGG | - | chr1.4:72249893-72249912 | MS.gene09987:CDS | 40.0% | |
| CTTACAACCTCAGTAGAATG+GGG | - | chr1.4:72251584-72251603 | MS.gene09987:intron | 40.0% | |
| CTTCTGTCTTTAACACGTGT+AGG | - | chr1.4:72249505-72249524 | MS.gene09987:CDS | 40.0% | |
| GAGATATGACAAACATGGCA+TGG | + | chr1.4:72250867-72250886 | None:intergenic | 40.0% | |
| GAGATTATTAGGAGAGCCTA+TGG | + | chr1.4:72247945-72247964 | None:intergenic | 40.0% | |
| GCATATGCATCACTCTACAT+AGG | + | chr1.4:72248245-72248264 | None:intergenic | 40.0% | |
| GGATCATGTAATTGGAAGTG+TGG | - | chr1.4:72248397-72248416 | MS.gene09987:intron | 40.0% | |
| GGCTGTATCATAAGCTATTC+TGG | - | chr1.4:72247995-72248014 | MS.gene09987:intron | 40.0% | |
| GGTCAGTATCAATGTCATCA+AGG | + | chr1.4:72249828-72249847 | None:intergenic | 40.0% | |
| GGTTAATTACGCTCAGTGAA+TGG | - | chr1.4:72251804-72251823 | MS.gene09987:intron | 40.0% | |
| GTAGATGACTGATAAGCTAG+CGG | - | chr1.4:72248867-72248886 | MS.gene09987:intron | 40.0% | |
| TAAGTCTCTTACAGCGGTTT+GGG | - | chr1.4:72250289-72250308 | MS.gene09987:intron | 40.0% | |
| TATAGCAAGAGACTACACCT+CGG | - | chr1.4:72251329-72251348 | MS.gene09987:CDS | 40.0% | |
| TCAACATCAATTCGGATGGA+TGG | - | chr1.4:72251761-72251780 | MS.gene09987:intron | 40.0% | |
| TCAACCTAGTTGTTCTTGGA+AGG | - | chr1.4:72247495-72247514 | MS.gene09987:CDS | 40.0% | |
| TCCAAAATTATGCGCATGCT+AGG | + | chr1.4:72249557-72249576 | None:intergenic | 40.0% | |
| TGCAGATTGTTTGAGCTCTA+TGG | - | chr1.4:72249273-72249292 | MS.gene09987:intron | 40.0% | |
| TGGATTTCTGTCCTAGTGAA+AGG | - | chr1.4:72251369-72251388 | MS.gene09987:intron | 40.0% | |
| TGTCTTTAACACGTGTAGGA+TGG | - | chr1.4:72249509-72249528 | MS.gene09987:CDS | 40.0% | |
| TGTTTGTGAAACTTGCAGAG+TGG | - | chr1.4:72252181-72252200 | MS.gene09987:intron | 40.0% | |
| TTCCACCAACAATCTTGTTC+AGG | + | chr1.4:72248322-72248341 | None:intergenic | 40.0% | |
| TTCCTGAACAAGATTGTTGG+TGG | - | chr1.4:72248317-72248336 | MS.gene09987:intron | 40.0% | |
| TTCTTTGTCTACTTCCCCTT+TGG | - | chr1.4:72247580-72247599 | MS.gene09987:CDS | 40.0% | |
| TTTGTGTTAGAAGCTGAGGA+AGG | - | chr1.4:72248471-72248490 | MS.gene09987:CDS | 40.0% | |
| ! | AAAAGCACACAAATCTGTCC+GGG | - | chr1.4:72249583-72249602 | MS.gene09987:intron | 40.0% |
| ! | CAAAAGCACACAAATCTGTC+CGG | - | chr1.4:72249582-72249601 | MS.gene09987:intron | 40.0% |
| ! | CAGAACTAAGGCTTCTCTTT+TGG | - | chr1.4:72250886-72250905 | MS.gene09987:intron | 40.0% |
| ! | GAGAAAATCTGAAGCAAAGC+AGG | + | chr1.4:72247542-72247561 | None:intergenic | 40.0% |
| ! | GGTGTAGTCTCTTGCTATAA+TGG | + | chr1.4:72251328-72251347 | None:intergenic | 40.0% |
| ! | GGTTAGTTACGTTTCATGGA+TGG | + | chr1.4:72252053-72252072 | None:intergenic | 40.0% |
| ! | TTCTTCACCCTTCACAGTTT+TGG | + | chr1.4:72250499-72250518 | None:intergenic | 40.0% |
| !! | AAATGGTTTGGTTCCATCCT+TGG | + | chr1.4:72250128-72250147 | None:intergenic | 40.0% |
| !! | GATCTAAATTTGCTGCTGGT+GGG | - | chr1.4:72249385-72249404 | MS.gene09987:intron | 40.0% |
| !! | GATGGATCTAAATTTGCTGC+TGG | - | chr1.4:72249381-72249400 | MS.gene09987:intron | 40.0% |
| !!! | GCTGGTTGATTTTTTCCCAT+TGG | + | chr1.4:72252297-72252316 | None:intergenic | 40.0% |
| AAGGAACTAACCCCTCTACA+GGG | - | chr1.4:72249324-72249343 | MS.gene09987:intron | 45.0% | |
| AATGATGCTGGATCACCTCA+GGG | - | chr1.4:72247431-72247450 | MS.gene09987:CDS | 45.0% | |
| ACACAAATCTGTCCGGGATA+TGG | - | chr1.4:72249589-72249608 | MS.gene09987:intron | 45.0% | |
| AGAGCAAGGTTTCAATCCCA+TGG | + | chr1.4:72248589-72248608 | None:intergenic | 45.0% | |
| AGGACAAGAATTTCCACGCT+TGG | + | chr1.4:72247522-72247541 | None:intergenic | 45.0% | |
| AGGGGATAAGTCTCTTACAG+CGG | - | chr1.4:72250283-72250302 | MS.gene09987:intron | 45.0% | |
| ATGTTGCGATAGTTGTACCG+AGG | + | chr1.4:72251349-72251368 | None:intergenic | 45.0% | |
| CACTCTACATAGGACCTGTT+TGG | + | chr1.4:72248235-72248254 | None:intergenic | 45.0% | |
| CGGTACAACTATCGCAACAT+TGG | - | chr1.4:72251349-72251368 | MS.gene09987:intron | 45.0% | |
| CTATTTGGCGCCGTTCAAAA+AGG | - | chr1.4:72250148-72250167 | MS.gene09987:intron | 45.0% | |
| GACACCTCAGAATTATGGAG+TGG | - | chr1.4:72249531-72249550 | MS.gene09987:intron | 45.0% | |
| GATTGAGGGTCTCTCATCAT+TGG | + | chr1.4:72252336-72252355 | None:intergenic | 45.0% | |
| GGAACAAAATAGGGCACAAG+AGG | - | chr1.4:72250324-72250343 | MS.gene09987:intron | 45.0% | |
| GGATGGACACCTCAGAATTA+TGG | - | chr1.4:72249526-72249545 | MS.gene09987:intron | 45.0% | |
| GGCGCCAAATAGAAATGGTT+TGG | + | chr1.4:72250140-72250159 | None:intergenic | 45.0% | |
| GGTTTAAACCTTGGTCTAGC+TGG | + | chr1.4:72252315-72252334 | None:intergenic | 45.0% | |
| TAGGCCACTCCATAATTCTG+AGG | + | chr1.4:72249538-72249557 | None:intergenic | 45.0% | |
| TATGGATGTGTGCGAGCATA+TGG | + | chr1.4:72251663-72251682 | None:intergenic | 45.0% | |
| TCATACACTCTCCTAGCTCA+AGG | + | chr1.4:72248813-72248832 | None:intergenic | 45.0% | |
| TCGTGCCTAATCACGTTCAA+TGG | + | chr1.4:72251868-72251887 | None:intergenic | 45.0% | |
| TGAACGGCGCCAAATAGAAA+TGG | + | chr1.4:72250145-72250164 | None:intergenic | 45.0% | |
| TGCAGAGTGGCAGATATACT+TGG | - | chr1.4:72252194-72252213 | MS.gene09987:intron | 45.0% | |
| TGGACCTTCCAAGAACAACT+AGG | + | chr1.4:72247502-72247521 | None:intergenic | 45.0% | |
| TTACTTGCGGGTCATGGATT+CGG | - | chr1.4:72247459-72247478 | MS.gene09987:CDS | 45.0% | |
| ! | ACTGATAAGCTAGCGGATAG+TGG | - | chr1.4:72248874-72248893 | MS.gene09987:intron | 45.0% |
| ! | CGAGAACTCTGATTCGTTCT+GGG | - | chr1.4:72252266-72252285 | MS.gene09987:CDS | 45.0% |
| ! | CGGACAGATTTGTGTGCTTT+TGG | + | chr1.4:72249584-72249603 | None:intergenic | 45.0% |
| ! | CGGTTTGGGATATGAGTTCA+TGG | - | chr1.4:72250303-72250322 | MS.gene09987:intron | 45.0% |
| ! | CTGTCCGGGATATGGATTTT+AGG | - | chr1.4:72249597-72249616 | MS.gene09987:intron | 45.0% |
| ! | GAGAACTCTGATTCGTTCTG+GGG | - | chr1.4:72252267-72252286 | MS.gene09987:CDS | 45.0% |
| ! | GCCTAGCATGCGCATAATTT+TGG | - | chr1.4:72249553-72249572 | MS.gene09987:intron | 45.0% |
| ! | TCGAGAACTCTGATTCGTTC+TGG | - | chr1.4:72252265-72252284 | MS.gene09987:CDS | 45.0% |
| !! | GGATCTAAATTTGCTGCTGG+TGG | - | chr1.4:72249384-72249403 | MS.gene09987:intron | 45.0% |
| !! | TAAATTTGCTGCTGGTGGGT+CGG | - | chr1.4:72249389-72249408 | MS.gene09987:intron | 45.0% |
| !! | TCGTTCTGGGGATTTCCAAT+GGG | - | chr1.4:72252279-72252298 | MS.gene09987:CDS | 45.0% |
| !! | TGTAGAGGGGTTAGTTCCTT+GGG | + | chr1.4:72249324-72249343 | None:intergenic | 45.0% |
| !! | TTCGTTCTGGGGATTTCCAA+TGG | - | chr1.4:72252278-72252297 | MS.gene09987:CDS | 45.0% |
| !!! | AAATATCATATTTAATTTAA+TGG | - | chr1.4:72250999-72251018 | MS.gene09987:intron | 5.0% |
| !!! | AATATCATATTTAATTTAAT+GGG | - | chr1.4:72251000-72251019 | MS.gene09987:intron | 5.0% |
| AGAAGCTGAGGAAGGTGATC+CGG | - | chr1.4:72248479-72248498 | MS.gene09987:CDS | 50.0% | |
| ATCCATGACCCGCAAGTAAC+CGG | + | chr1.4:72247458-72247477 | None:intergenic | 50.0% | |
| CAAGGAACTAACCCCTCTAC+AGG | - | chr1.4:72249323-72249342 | MS.gene09987:intron | 50.0% | |
| CAATGCTCCCCATTCTACTG+AGG | + | chr1.4:72251594-72251613 | None:intergenic | 50.0% | |
| CTAACCCCTCTACAGGGTAT+TGG | - | chr1.4:72249330-72249349 | MS.gene09987:intron | 50.0% | |
| CTGATGGTTCAGCGAGAATC+TGG | - | chr1.4:72249909-72249928 | MS.gene09987:CDS | 50.0% | |
| GAATGATGCTGGATCACCTC+AGG | - | chr1.4:72247430-72247449 | MS.gene09987:CDS | 50.0% | |
| GGAACCAATACCCTGTAGAG+GGG | + | chr1.4:72249337-72249356 | None:intergenic | 50.0% | |
| GGGAACCAATACCCTGTAGA+GGG | + | chr1.4:72249338-72249357 | None:intergenic | 50.0% | |
| GTATTTCCCGTCGTGGCTAA+CGG | + | chr1.4:72250378-72250397 | None:intergenic | 50.0% | |
| TGGGAACCAATACCCTGTAG+AGG | + | chr1.4:72249339-72249358 | None:intergenic | 50.0% | |
| TGGTTCAGCGAGAATCTGGA+AGG | - | chr1.4:72249913-72249932 | MS.gene09987:CDS | 50.0% | |
| ! | CTCAGTAGAATGGGGAGCAT+TGG | - | chr1.4:72251592-72251611 | MS.gene09987:intron | 50.0% |
| !! | CTGTAGAGGGGTTAGTTCCT+TGG | + | chr1.4:72249325-72249344 | None:intergenic | 50.0% |
| !! | GAGAAAGGTATTTCCCGTCG+TGG | + | chr1.4:72250385-72250404 | None:intergenic | 50.0% |
| GACCACTCTGTCTCGCAACT+CGG | - | chr1.4:72249955-72249974 | MS.gene09987:intron | 55.0% | |
| GCTATTGCTGTGCACCCTAG+CGG | - | chr1.4:72248504-72248523 | MS.gene09987:CDS | 55.0% | |
| GGGTGCACAGCAATAGCAAC+CGG | + | chr1.4:72248501-72248520 | None:intergenic | 55.0% | |
| GTAATGGCCGTTAGCCACGA+CGG | - | chr1.4:72250368-72250387 | MS.gene09987:intron | 55.0% | |
| GTTCTTGGAAGGTCCAAGCG+TGG | - | chr1.4:72247506-72247525 | MS.gene09987:CDS | 55.0% | |
| TAATGGCCGTTAGCCACGAC+GGG | - | chr1.4:72250369-72250388 | MS.gene09987:intron | 55.0% | |
| TACCGAGTTGCGAGACAGAG+TGG | + | chr1.4:72249960-72249979 | None:intergenic | 55.0% | |
| TTGCGAGACAGAGTGGTCAC+AGG | + | chr1.4:72249953-72249972 | None:intergenic | 55.0% | |
| CCTCAGGGTCCGGTTACTTG+CGG | - | chr1.4:72247446-72247465 | MS.gene09987:CDS | 60.0% | |
| CTCAGGGTCCGGTTACTTGC+GGG | - | chr1.4:72247447-72247466 | MS.gene09987:CDS | 60.0% | |
| GTCCGGTTACTTGCGGGTCA+TGG | - | chr1.4:72247453-72247472 | MS.gene09987:CDS | 60.0% | |
| TGCTGGATCACCTCAGGGTC+CGG | - | chr1.4:72247436-72247455 | MS.gene09987:CDS | 60.0% | |
| CCGCAAGTAACCGGACCCTG+AGG | + | chr1.4:72247449-72247468 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 72247425 | 72252389 | 72247425 | ID=MS.gene09987 |
| chr1.4 | mRNA | 72247425 | 72252389 | 72247425 | ID=MS.gene09987.t1;Parent=MS.gene09987 |
| chr1.4 | exon | 72252213 | 72252389 | 72252213 | ID=MS.gene09987.t1.exon1;Parent=MS.gene09987.t1 |
| chr1.4 | CDS | 72252213 | 72252389 | 72252213 | ID=cds.MS.gene09987.t1;Parent=MS.gene09987.t1 |
| chr1.4 | exon | 72251249 | 72251349 | 72251249 | ID=MS.gene09987.t1.exon2;Parent=MS.gene09987.t1 |
| chr1.4 | CDS | 72251249 | 72251349 | 72251249 | ID=cds.MS.gene09987.t1;Parent=MS.gene09987.t1 |
| chr1.4 | exon | 72250404 | 72250536 | 72250404 | ID=MS.gene09987.t1.exon3;Parent=MS.gene09987.t1 |
| chr1.4 | CDS | 72250404 | 72250536 | 72250404 | ID=cds.MS.gene09987.t1;Parent=MS.gene09987.t1 |
| chr1.4 | exon | 72250196 | 72250287 | 72250196 | ID=MS.gene09987.t1.exon4;Parent=MS.gene09987.t1 |
| chr1.4 | CDS | 72250196 | 72250287 | 72250196 | ID=cds.MS.gene09987.t1;Parent=MS.gene09987.t1 |
| chr1.4 | exon | 72249838 | 72249937 | 72249838 | ID=MS.gene09987.t1.exon5;Parent=MS.gene09987.t1 |
| chr1.4 | CDS | 72249838 | 72249937 | 72249838 | ID=cds.MS.gene09987.t1;Parent=MS.gene09987.t1 |
| chr1.4 | exon | 72249645 | 72249717 | 72249645 | ID=MS.gene09987.t1.exon6;Parent=MS.gene09987.t1 |
| chr1.4 | CDS | 72249645 | 72249717 | 72249645 | ID=cds.MS.gene09987.t1;Parent=MS.gene09987.t1 |
| chr1.4 | exon | 72249409 | 72249529 | 72249409 | ID=MS.gene09987.t1.exon7;Parent=MS.gene09987.t1 |
| chr1.4 | CDS | 72249409 | 72249529 | 72249409 | ID=cds.MS.gene09987.t1;Parent=MS.gene09987.t1 |
| chr1.4 | exon | 72248424 | 72248543 | 72248424 | ID=MS.gene09987.t1.exon8;Parent=MS.gene09987.t1 |
| chr1.4 | CDS | 72248424 | 72248543 | 72248424 | ID=cds.MS.gene09987.t1;Parent=MS.gene09987.t1 |
| chr1.4 | exon | 72248167 | 72248237 | 72248167 | ID=MS.gene09987.t1.exon9;Parent=MS.gene09987.t1 |
| chr1.4 | CDS | 72248167 | 72248237 | 72248167 | ID=cds.MS.gene09987.t1;Parent=MS.gene09987.t1 |
| chr1.4 | exon | 72247425 | 72247615 | 72247425 | ID=MS.gene09987.t1.exon10;Parent=MS.gene09987.t1 |
| chr1.4 | CDS | 72247425 | 72247615 | 72247425 | ID=cds.MS.gene09987.t1;Parent=MS.gene09987.t1 |
| Gene Sequence |
| Protein sequence |
