AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20016

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20016.t1 MTR_1g492640 97.849 465 8 2 1 465 19 481 0.0 914
MS.gene20016.t1 MTR_1g492640 97.721 351 6 2 115 465 1 349 0.0 683
MS.gene20016.t1 MTR_1g492640 97.059 340 8 2 1 340 19 356 0.0 665
MS.gene20016.t1 MTR_1g492640 97.059 340 8 2 1 340 1 338 0.0 663
MS.gene20016.t1 MTR_4g055610 57.974 464 192 2 1 464 1 461 0.0 572
MS.gene20016.t1 MTR_1g492640 95.023 221 11 0 1 221 19 239 1.31e-152 435
MS.gene20016.t1 MTR_1g492640 95.023 221 11 0 1 221 1 221 3.56e-152 433
MS.gene20016.t1 MTR_8g099320 47.297 444 230 4 23 465 10 450 9.64e-140 409
MS.gene20016.t1 MTR_1g070470 34.499 429 261 8 43 464 24 439 2.88e-75 243
MS.gene20016.t1 MTR_4g055637 57.767 206 76 3 260 464 182 377 9.89e-72 232
MS.gene20016.t1 MTR_6g022790 29.844 449 292 9 22 463 23 455 2.53e-58 199
MS.gene20016.t1 MTR_2g101920 28.721 477 310 12 1 463 1 461 2.44e-53 186
MS.gene20016.t1 MTR_8g080120 30.626 431 270 11 43 463 25 436 6.51e-52 181
MS.gene20016.t1 MTR_5g081630 32.997 397 244 9 72 464 4 382 1.45e-49 174
MS.gene20016.t1 MTR_4g103890 28.333 420 278 9 48 460 17 420 1.61e-47 169
MS.gene20016.t1 MTR_6g023065 29.103 457 297 10 14 463 27 463 4.31e-46 166
MS.gene20016.t1 MTR_4g104510 29.237 472 298 14 2 464 5 449 1.46e-45 164
MS.gene20016.t1 MTR_4g104510 28.936 470 300 13 2 464 5 447 3.16e-45 164
MS.gene20016.t1 MTR_7g038910 29.149 470 299 11 1 463 1 443 9.21e-44 159
MS.gene20016.t1 MTR_6g023075 30.140 428 277 8 43 463 16 428 2.36e-43 158
MS.gene20016.t1 MTR_6g022780 29.439 428 280 8 43 463 16 428 3.17e-43 158
MS.gene20016.t1 MTR_1g093030 29.930 431 273 11 43 463 26 437 4.22e-43 157
MS.gene20016.t1 MTR_1g093020 28.825 451 288 12 23 463 10 437 6.41e-43 157
MS.gene20016.t1 MTR_5g054730 29.002 431 277 11 43 463 28 439 1.70e-41 153
MS.gene20016.t1 MTR_3g005740 29.095 464 294 14 15 463 26 469 7.28e-40 149
MS.gene20016.t1 MTR_1g093020 28.401 419 273 10 23 434 10 408 2.38e-39 147
MS.gene20016.t1 MTR_3g069960 30.809 383 241 10 87 464 72 435 2.10e-38 145
MS.gene20016.t1 MTR_3g069960 30.809 383 241 10 87 464 19 382 2.40e-38 144
MS.gene20016.t1 MTR_1g106000 27.802 464 284 12 44 465 18 472 3.71e-38 145
MS.gene20016.t1 MTR_7g038910 29.351 385 238 11 1 378 1 358 3.85e-38 143
MS.gene20016.t1 MTR_7g038910 29.288 379 231 10 1 366 1 355 5.17e-38 142
MS.gene20016.t1 MTR_3g115090 28.205 429 270 15 43 449 86 498 2.39e-37 143
MS.gene20016.t1 MTR_3g085820 27.966 354 231 8 7 353 3 339 2.73e-37 140
MS.gene20016.t1 MTR_2g096830 27.570 428 288 8 43 463 16 428 4.12e-37 141
MS.gene20016.t1 MTR_1g105980 27.533 454 289 12 44 465 25 470 3.44e-36 139
MS.gene20016.t1 MTR_1g105995 28.913 460 271 13 44 463 24 467 1.63e-34 134
MS.gene20016.t1 MTR_2g096830 28.107 338 216 8 43 366 16 340 7.08e-32 125
MS.gene20016.t1 MTR_3g096840 26.273 491 308 19 13 465 8 482 8.71e-32 127
MS.gene20016.t1 MTR_0531s0020 29.568 301 192 7 43 336 51 338 1.08e-31 125
MS.gene20016.t1 MTR_1g105990 27.851 456 280 16 44 461 24 468 6.64e-31 124
MS.gene20016.t1 MTR_3g088455 25.934 482 314 15 17 463 3 476 5.49e-30 122
MS.gene20016.t1 MTR_1g007270 26.617 402 261 13 52 429 44 435 1.79e-29 120
MS.gene20016.t1 MTR_3g088475 26.077 441 289 11 52 463 45 477 2.88e-29 120
MS.gene20016.t1 MTR_1g029750 28.146 437 266 17 17 414 4 431 3.02e-29 120
MS.gene20016.t1 MTR_3g110660 24.632 475 304 14 25 462 21 478 4.36e-29 119
MS.gene20016.t1 MTR_4g073520 25.410 488 304 17 21 465 41 511 9.09e-29 119
MS.gene20016.t1 MTR_4g073520 25.410 488 304 17 21 465 41 511 1.03e-28 119
MS.gene20016.t1 MTR_3g096800 25.778 450 281 17 52 465 44 476 2.24e-28 117
MS.gene20016.t1 MTR_3g461440 26.010 396 257 11 52 419 34 421 2.02e-27 114
MS.gene20016.t1 MTR_5g023240 27.790 457 280 17 33 463 78 510 6.45e-27 113
MS.gene20016.t1 MTR_3g461470 25.505 396 259 11 52 419 34 421 9.76e-27 112
MS.gene20016.t1 MTR_1g007380 24.945 457 291 17 44 462 26 468 2.98e-26 111
MS.gene20016.t1 MTR_3g461430 25.441 397 258 13 52 419 41 428 1.03e-25 110
MS.gene20016.t1 MTR_3g096830 26.768 396 241 14 52 414 37 416 2.72e-25 108
MS.gene20016.t1 MTR_8g094290 25.101 494 314 19 4 465 5 474 4.72e-25 107
MS.gene20016.t1 MTR_3g061390 27.273 396 252 12 52 419 34 421 2.83e-24 105
MS.gene20016.t1 MTR_4g033275 46.316 95 51 0 340 434 7 101 2.69e-23 94.4
MS.gene20016.t1 MTR_5g096840 26.817 399 251 15 52 419 40 428 3.52e-23 102
MS.gene20016.t1 MTR_3g110420 24.268 478 320 16 15 462 2 467 3.09e-22 99.4
MS.gene20016.t1 MTR_5g023260 25.664 452 297 15 33 463 99 532 3.40e-22 99.8
MS.gene20016.t1 MTR_4g075750 24.823 423 284 13 51 452 80 489 4.57e-22 99.4
MS.gene20016.t1 MTR_3g069960 30.242 248 158 6 87 333 72 305 6.46e-22 97.1
MS.gene20016.t1 MTR_2g012470 27.645 293 187 8 22 299 77 359 7.94e-21 95.5
MS.gene20016.t1 MTR_3g110660 25.215 349 235 11 25 354 21 362 1.83e-20 93.2
MS.gene20016.t1 MTR_3g461480 25.700 393 253 16 52 414 38 421 3.79e-20 93.2
MS.gene20016.t1 MTR_1g007240 23.198 444 297 15 52 463 23 454 1.75e-19 91.3
MS.gene20016.t1 MTR_3g072870 23.543 446 282 13 45 464 44 456 6.46e-18 86.3
MS.gene20016.t1 MTR_3g088465 24.586 362 233 14 17 351 3 351 3.87e-17 83.6
MS.gene20016.t1 MTR_4g073770 24.473 474 301 15 19 464 15 459 5.42e-17 83.6
MS.gene20016.t1 MTR_1g007180 23.904 456 279 18 52 463 23 454 3.57e-16 80.9
MS.gene20016.t1 MTR_3g110430 23.515 404 274 11 52 428 72 467 1.20e-15 79.7
MS.gene20016.t1 MTR_7g067450 23.404 423 283 12 9 421 13 404 4.81e-14 74.3
MS.gene20016.t1 MTR_3g110420 23.794 311 214 11 15 308 2 306 8.53e-14 72.8
MS.gene20016.t1 MTR_5g096850 24.051 395 257 14 52 414 36 419 3.07e-13 72.0
MS.gene20016.t1 MTR_4g415390 24.031 387 251 12 45 421 51 404 5.30e-13 70.9
MS.gene20016.t1 MTR_3g461440 23.611 288 188 8 157 419 4 284 5.82e-13 70.1
MS.gene20016.t1 MTR_4g415390 23.884 448 278 16 45 464 51 463 6.03e-13 71.2
MS.gene20016.t1 MTR_5g082220 22.517 453 278 16 45 464 50 462 1.03e-12 70.5
MS.gene20016.t1 MTR_5g082220 22.517 453 278 16 45 464 40 452 1.10e-12 70.1
MS.gene20016.t1 MTR_5g017200 25.778 225 150 8 52 265 39 257 3.39e-11 64.3
MS.gene20016.t1 MTR_2g031750 24.607 382 228 15 126 463 22 387 3.92e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20016.t1 AT1G08230 53.394 442 206 0 23 464 9 450 8.85e-179 508
MS.gene20016.t1 AT5G41800 49.658 439 218 3 28 465 13 449 1.37e-138 406
MS.gene20016.t1 AT1G08230 52.286 350 167 0 115 464 1 350 9.65e-137 397
MS.gene20016.t1 AT1G08230 52.280 329 157 0 136 464 3 331 4.46e-126 370
MS.gene20016.t1 AT1G08230 52.280 329 157 0 136 464 3 331 4.46e-126 370
MS.gene20016.t1 AT1G08230 52.280 329 157 0 136 464 3 331 4.46e-126 370
MS.gene20016.t1 AT5G40780 29.614 466 299 10 5 463 3 446 2.30e-56 193
MS.gene20016.t1 AT3G55740 32.168 429 268 10 41 464 28 438 3.12e-55 190
MS.gene20016.t1 AT2G39890 31.860 430 268 11 41 464 31 441 3.84e-54 187
MS.gene20016.t1 AT2G39890 31.860 430 268 11 41 464 31 441 3.84e-54 187
MS.gene20016.t1 AT3G55740 32.746 397 245 9 72 464 4 382 5.77e-53 182
MS.gene20016.t1 AT3G55740 32.746 397 245 9 72 464 4 382 5.77e-53 182
MS.gene20016.t1 AT5G40780 31.643 414 260 9 57 463 1 398 1.70e-52 182
MS.gene20016.t1 AT5G40780 31.643 414 260 9 57 463 1 398 1.70e-52 182
MS.gene20016.t1 AT1G48640 29.821 446 290 10 25 463 24 453 6.90e-52 182
MS.gene20016.t1 AT2G36590 33.256 430 262 11 41 464 25 435 7.96e-52 181
MS.gene20016.t1 AT2G39890 32.412 398 245 10 72 464 4 382 8.59e-52 179
MS.gene20016.t1 AT1G71680 29.526 464 297 12 12 463 3 448 7.72e-47 168
MS.gene20016.t1 AT1G24400 28.753 473 295 12 1 463 1 441 1.02e-46 167
MS.gene20016.t1 AT1G61270 29.466 431 276 10 31 449 23 437 3.67e-46 166
MS.gene20016.t1 AT1G67640 28.947 456 292 10 24 463 2 441 9.93e-41 151
MS.gene20016.t1 AT3G01760 27.685 419 276 9 43 449 33 436 1.11e-40 151
MS.gene20016.t1 AT1G25530 29.002 431 275 11 44 463 30 440 4.12e-39 147
MS.gene20016.t1 AT1G71680 28.653 349 228 8 12 351 3 339 1.24e-38 144
MS.gene20016.t1 AT2G36590 33.898 295 179 7 41 333 25 305 1.79e-35 134
MS.gene20016.t1 AT1G10010 26.652 454 290 13 44 464 30 473 1.14e-30 124
MS.gene20016.t1 AT1G10010 26.652 454 290 13 44 464 31 474 1.29e-30 124
MS.gene20016.t1 AT5G09220 26.049 453 280 16 52 465 56 492 1.76e-29 120
MS.gene20016.t1 AT5G63850 25.221 452 285 15 52 465 29 465 1.76e-28 117
MS.gene20016.t1 AT1G77380 25.455 440 292 11 52 462 40 472 2.28e-27 114
MS.gene20016.t1 AT1G58360 23.444 482 323 14 13 462 13 480 5.47e-26 110
MS.gene20016.t1 AT1G44100 25.490 459 280 17 52 465 38 479 1.31e-25 109
MS.gene20016.t1 AT5G49630 25.517 435 267 15 17 411 10 427 4.92e-23 102
MS.gene20016.t1 AT4G35180 25.231 432 290 15 43 457 59 474 1.31e-21 97.8
MS.gene20016.t1 AT1G47670 24.646 353 234 10 18 351 69 408 1.04e-19 92.0
MS.gene20016.t1 AT5G23810 25.743 404 237 14 52 411 36 420 1.37e-16 82.4
MS.gene20016.t1 AT4G35180 26.766 269 175 9 43 299 59 317 1.64e-15 78.2
MS.gene20016.t1 AT1G77690 23.502 434 287 13 14 435 18 418 3.66e-15 77.8
MS.gene20016.t1 AT2G21050 23.810 420 273 13 12 421 16 398 1.74e-14 75.9
MS.gene20016.t1 AT2G38120 22.967 418 274 13 14 421 25 404 3.20e-11 65.5
MS.gene20016.t1 AT2G38120 22.432 477 306 16 14 464 25 463 4.04e-11 65.5

Find 94 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATCCTTCTTCAAGTCTT+TGG 0.187790 1.4:-72626659 MS.gene20016:CDS
GCAAAACTAACCTGGATTTC+TGG 0.213258 1.4:+72627599 None:intergenic
ATTCTAGCTAACTACATTAA+TGG 0.228845 1.4:-72626734 MS.gene20016:CDS
GTGTTGCTATCTCTGGTTAT+TGG 0.236584 1.4:-72626784 MS.gene20016:CDS
CTCCACATATAATGATAAAT+TGG 0.244397 1.4:+72627958 None:intergenic
ATATGCTTTGGGACAGTAAT+TGG 0.247452 1.4:-72628166 MS.gene20016:CDS
GCCATTCTTTCCAGATATAA+TGG 0.250563 1.4:-72626058 MS.gene20016:CDS
GTTGGTTTGGAGGAGTAATT+TGG 0.258662 1.4:-72628880 MS.gene20016:CDS
TTCACTCTTCTGGGTTGGTT+TGG 0.267371 1.4:-72628893 MS.gene20016:CDS
ATTGAAAACTGTCCTTTCTT+TGG 0.270053 1.4:+72626153 None:intergenic
CCAAACAATGCCATTATATC+TGG 0.276029 1.4:+72626048 None:intergenic
TAAAGCTTCATTGATCCTTC+TGG 0.278033 1.4:+72627981 None:intergenic
TGGAGTTGTAACTATGCTTT+TGG 0.281191 1.4:-72627940 MS.gene20016:CDS
ATCTCTGGTTATTGGGCATT+TGG 0.283481 1.4:-72626776 MS.gene20016:CDS
CCAAACAAGGCATAATCTAT+TGG 0.285091 1.4:-72625957 MS.gene20016:CDS
TGTTGCTATCTCTGGTTATT+GGG 0.292003 1.4:-72626783 MS.gene20016:CDS
TTCTAGCTAACTACATTAAT+GGG 0.296570 1.4:-72626733 MS.gene20016:CDS
CCCAGAAGAGTGAATGAAAA+TGG 0.300763 1.4:+72628902 None:intergenic
CCAATAGATTATGCCTTGTT+TGG 0.304670 1.4:+72625957 None:intergenic
GATTCAAATAATTCATTTGT+TGG 0.306422 1.4:+72626189 None:intergenic
CCGAGAGAGTATTCTGTAAA+AGG 0.306567 1.4:-72627698 MS.gene20016:CDS
TTCAATTTATCATATGCTTT+GGG 0.330472 1.4:-72628177 MS.gene20016:CDS
GTAATTTGGTTGGTCCTTGC+AGG 0.336273 1.4:-72628866 MS.gene20016:CDS
CCAGATATAATGGCATTGTT+TGG 0.340494 1.4:-72626048 MS.gene20016:CDS
CTTCAATTTATCATATGCTT+TGG 0.341049 1.4:-72628178 MS.gene20016:CDS
ACTCTTCTGGGTTGGTTTGG+AGG 0.360871 1.4:-72628890 MS.gene20016:CDS
TATTGGGTGAATACATTGAT+TGG 0.369575 1.4:-72625940 MS.gene20016:CDS
TATTTCAGTGTTGCTATCTC+TGG 0.372416 1.4:-72626791 MS.gene20016:CDS
CCAGTTTAGATTCAGAGATA+TGG 0.379682 1.4:-72628774 MS.gene20016:CDS
CAAACAAGGCATAATCTATT+GGG 0.383365 1.4:-72625956 MS.gene20016:CDS
CCATATCTCTGAATCTAAAC+TGG 0.388069 1.4:+72628774 None:intergenic
TGGGCATTTGGAAATGAATC+TGG 0.409926 1.4:-72626764 MS.gene20016:CDS
TATACAAGTGATAGTGAAAA+GGG 0.415951 1.4:-72629163 MS.gene20016:CDS
GCCATTATATCTGGAAAGAA+TGG 0.421778 1.4:+72626057 None:intergenic
TTTCATTCACTCTTCTGGGT+TGG 0.422245 1.4:-72628898 MS.gene20016:CDS
AAGTTTGTTCTTGTTTCTAA+AGG 0.431928 1.4:-72629088 MS.gene20016:intron
AGATGGGCAAAATACTATAT+AGG 0.433545 1.4:-72628205 MS.gene20016:CDS
AAACTGTTTGGTGTCTTCAA+TGG 0.434041 1.4:-72627662 MS.gene20016:CDS
GTAATTGGTGGTCCTCTTGT+GGG 0.436804 1.4:-72628151 MS.gene20016:CDS
TCTCATGAAGATAAACTGTT+TGG 0.440619 1.4:-72627674 MS.gene20016:CDS
ATATACAAGTGATAGTGAAA+AGG 0.456820 1.4:-72629164 MS.gene20016:CDS
TACCAATTTATCATTATATG+TGG 0.457634 1.4:-72627960 MS.gene20016:CDS
ATCCTTCTGGATGGTAAAGT+TGG 0.467861 1.4:+72627994 None:intergenic
TTGTGCCAAGGGTGCTCTCT+AGG 0.470573 1.4:-72626122 MS.gene20016:CDS
AGTAATTGGTGGTCCTCTTG+TGG 0.471430 1.4:-72628152 MS.gene20016:CDS
AAGAAGGATGAGTATATTTG+TGG 0.471445 1.4:+72626670 None:intergenic
TAGATTATGCCTTGTTTGGA+AGG 0.476875 1.4:+72625961 None:intergenic
TCATTTGACAACATCTATTG+TGG 0.482815 1.4:-72628945 MS.gene20016:CDS
CATTTGACAACATCTATTGT+GGG 0.484467 1.4:-72628944 MS.gene20016:CDS
AAGAACTATTGCTTCCCAAA+TGG 0.486675 1.4:-72626703 MS.gene20016:CDS
AACTTTGGCACCTCCTGTGA+AGG 0.500740 1.4:-72626864 MS.gene20016:CDS
TGGGATTATTCCAGAAATCC+AGG 0.501151 1.4:-72627609 MS.gene20016:intron
AATGGAAGTGTAAGAATCAC+TGG 0.501324 1.4:+72628920 None:intergenic
CCCTATCACAACTAAAATTG+AGG 0.506614 1.4:+72625909 None:intergenic
GTGAATACATTGATTGGAGG+AGG 0.520319 1.4:-72625934 MS.gene20016:CDS
AATAATCCCACTAGCATATG+TGG 0.533821 1.4:+72627622 None:intergenic
TATCTCAAGGAGTGAAAGGA+TGG 0.534203 1.4:+72627909 None:intergenic
ATTGACCTAGAGAGCACCCT+TGG 0.539691 1.4:+72626117 None:intergenic
TTGGAACATCATGCTCAGCT+TGG 0.539890 1.4:-72628803 MS.gene20016:CDS
TGTTGTGACAGGACCAAGAT+GGG 0.546655 1.4:-72628221 MS.gene20016:intron
AGACTCTTTCCTCCCACAAG+AGG 0.553648 1.4:+72628139 None:intergenic
TGGGTGAATACATTGATTGG+AGG 0.555938 1.4:-72625937 MS.gene20016:CDS
TGCTTTGGGACAGTAATTGG+TGG 0.556122 1.4:-72628163 MS.gene20016:CDS
ACTTCACCTGAGTTAGATGC+AGG 0.556542 1.4:-72629115 MS.gene20016:CDS
AATGTATCTCAAGGAGTGAA+AGG 0.559352 1.4:+72627905 None:intergenic
CAATGCGCAATGTTGTGCCA+AGG 0.562014 1.4:-72626134 MS.gene20016:CDS
ACTTTCAAGCCTTCCAAACA+AGG 0.562223 1.4:-72625970 MS.gene20016:CDS
GTTTGGAGGAGTAATTTGGT+TGG 0.564814 1.4:-72628876 MS.gene20016:CDS
AATCAGATTAATGTATCTCA+AGG 0.567736 1.4:+72627896 None:intergenic
TACCAACTTTACCATCCAGA+AGG 0.580856 1.4:-72627996 MS.gene20016:CDS
TCAATCCAAAGACTTGAAGA+AGG 0.582668 1.4:+72626654 None:intergenic
AGCATATGATAAATTGAAGA+GGG 0.583245 1.4:+72628182 None:intergenic
ATCTAACTCAGGTGAAGTAG+AGG 0.591866 1.4:+72629120 None:intergenic
TTGCTACCACATATGCTAGT+GGG 0.592496 1.4:-72627628 MS.gene20016:CDS
TTTGCTCCTGCATCTAACTC+AGG 0.601599 1.4:+72629109 None:intergenic
ATTGCTACCACATATGCTAG+TGG 0.604816 1.4:-72627629 MS.gene20016:CDS
TATGCAACATTTCTCACCGT+CGG 0.606735 1.4:-72627852 MS.gene20016:CDS
ACTTTGGCACCTCCTGTGAA+GGG 0.608006 1.4:-72626863 MS.gene20016:CDS
ATTGGCAAAATGAAATCTAG+AGG 0.608137 1.4:+72626009 None:intergenic
AAGCATATGATAAATTGAAG+AGG 0.610873 1.4:+72628181 None:intergenic
ATGTTGTGACAGGACCAAGA+TGG 0.615494 1.4:-72628222 MS.gene20016:intron
AGAATGTGATCGCTCCTGCA+AGG 0.626386 1.4:+72628852 None:intergenic
GCTTCATTGATCCTTCTGGA+TGG 0.631067 1.4:+72627985 None:intergenic
AATGCGCAATGTTGTGCCAA+GGG 0.637146 1.4:-72626133 MS.gene20016:CDS
TGTGGGAGGAAAGAGTCTCA+AGG 0.646216 1.4:-72628134 MS.gene20016:intron
TCAAGTCTTTGGATTGACTG+CGG 0.653522 1.4:-72626648 MS.gene20016:intron
TGAATACATTGATTGGAGGA+GGG 0.653687 1.4:-72625933 MS.gene20016:CDS
TATCTCTGAATCTAAACTGG+CGG 0.664050 1.4:+72628777 None:intergenic
TCTAGCTAACTACATTAATG+GGG 0.669275 1.4:-72626732 MS.gene20016:CDS
ATTGGTGGTCCTCTTGTGGG+AGG 0.671489 1.4:-72628148 MS.gene20016:CDS
TTTACAGAATACTCTCTCGG+CGG 0.727989 1.4:+72627701 None:intergenic
ACCGACGTATATCGAGCCGA+CGG 0.742222 1.4:+72627836 None:intergenic
GTAGGATCATGGTTACACTG+TGG 0.750740 1.4:-72628971 MS.gene20016:intron
ACCGTCGGCTCGATATACGT+CGG 0.773213 1.4:-72627837 MS.gene20016:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATTAATTAATTTACTATA+TGG - chr1.4:72626027-72626046 MS.gene20016:CDS 10.0%
!! AATTAATTTACTATATGGTT+TGG - chr1.4:72626032-72626051 MS.gene20016:CDS 15.0%
!!! AAAGAAAGAAAAGTATTAAA+AGG + chr1.4:72626325-72626344 None:intergenic 15.0%
!!! GAATTATTTGAATCAATTTT+CGG - chr1.4:72628859-72628878 MS.gene20016:CDS 15.0%
!! AAAGTGAGTTAAATGTTAAA+CGG - chr1.4:72627804-72627823 MS.gene20016:intron 20.0%
!! AAATCAAAATCACTTTACAT+TGG - chr1.4:72627714-72627733 MS.gene20016:CDS 20.0%
!! GATTCAAATAATTCATTTGT+TGG + chr1.4:72628853-72628872 None:intergenic 20.0%
!! GTTATATTGTAAAAAACCAT+TGG + chr1.4:72629051-72629070 None:intergenic 20.0%
!! TACCAATTTATCATTATATG+TGG - chr1.4:72627079-72627098 MS.gene20016:intron 20.0%
!! TTATAACTTGATTATATTGC+AGG - chr1.4:72628816-72628835 MS.gene20016:CDS 20.0%
!! TTATTTCAATAAATCTTCGA+TGG - chr1.4:72628594-72628613 MS.gene20016:intron 20.0%
!! TTCAATTTATCATATGCTTT+GGG - chr1.4:72626862-72626881 MS.gene20016:CDS 20.0%
!!! AATGTAAAGTGATTTTGATT+TGG + chr1.4:72627715-72627734 None:intergenic 20.0%
!!! AGAAGCATTACTATATAATA+AGG + chr1.4:72628706-72628725 None:intergenic 20.0%
!!! AGAATTGATTTTGACATTTT+TGG - chr1.4:72627559-72627578 MS.gene20016:intron 20.0%
!!! TAATCTTTTATCTATTGTCT+TGG - chr1.4:72626217-72626236 MS.gene20016:intron 20.0%
!!! TCATTGTTGTTATTAATCAT+TGG - chr1.4:72626346-72626365 MS.gene20016:intron 20.0%
! AAGCATATGATAAATTGAAG+AGG + chr1.4:72626861-72626880 None:intergenic 25.0%
! AAGCTAAAAATCAATTGAAG+AGG - chr1.4:72627858-72627877 MS.gene20016:CDS 25.0%
! AAGTTAAAAATCGATTGTAG+AGG + chr1.4:72627655-72627674 None:intergenic 25.0%
! AATATTGTGCTTATATGAGT+AGG + chr1.4:72626454-72626473 None:intergenic 25.0%
! AATCAGATTAATGTATCTCA+AGG + chr1.4:72627146-72627165 None:intergenic 25.0%
! AATGTATATGCATAACAGTT+TGG + chr1.4:72628426-72628445 None:intergenic 25.0%
! AGCATATGATAAATTGAAGA+GGG + chr1.4:72626860-72626879 None:intergenic 25.0%
! ATGTATATGCATAACAGTTT+GGG + chr1.4:72628425-72628444 None:intergenic 25.0%
! CTCAAGGTAATAACATAAAA+AGG - chr1.4:72626921-72626940 MS.gene20016:intron 25.0%
! CTCCACATATAATGATAAAT+TGG + chr1.4:72627084-72627103 None:intergenic 25.0%
! CTTATACTATAGTTTCACTA+AGG - chr1.4:72626987-72627006 MS.gene20016:intron 25.0%
! CTTCAATTTATCATATGCTT+TGG - chr1.4:72626861-72626880 MS.gene20016:CDS 25.0%
! GAAACTATAGTATAAGAATG+TGG + chr1.4:72626983-72627002 None:intergenic 25.0%
! GAACTTATTTATAGCTTAGT+TGG - chr1.4:72628485-72628504 MS.gene20016:intron 25.0%
! GATTTATTGAAATAAGCTCA+AGG + chr1.4:72628589-72628608 None:intergenic 25.0%
! GTAACTTAAAGTGACTAAAT+TGG + chr1.4:72626499-72626518 None:intergenic 25.0%
! TAAATGTACATGTTACTGTT+TGG - chr1.4:72628523-72628542 MS.gene20016:intron 25.0%
! TAGAATTGATTATGACATCT+TGG + chr1.4:72627955-72627974 None:intergenic 25.0%
! TAGAGAACAAATGTTGTAAA+TGG - chr1.4:72627481-72627500 MS.gene20016:intron 25.0%
! TCAAGTTATAATCATTCATC+AGG + chr1.4:72628807-72628826 None:intergenic 25.0%
! TCTAACTTGAAGTTAGAATT+TGG + chr1.4:72627892-72627911 None:intergenic 25.0%
! TGAAAGAGTTTATGTTATGT+TGG - chr1.4:72628556-72628575 MS.gene20016:intron 25.0%
! TGATTCTAGATATGTATGTT+TGG + chr1.4:72628016-72628035 None:intergenic 25.0%
!! AGTCACTTGACATATATTTT+TGG + chr1.4:72628122-72628141 None:intergenic 25.0%
!! ATATACAAGTGATAGTGAAA+AGG - chr1.4:72625875-72625894 MS.gene20016:CDS 25.0%
!! ATTCTAGCTAACTACATTAA+TGG - chr1.4:72628305-72628324 MS.gene20016:intron 25.0%
!! TATACAAGTGATAGTGAAAA+GGG - chr1.4:72625876-72625895 MS.gene20016:CDS 25.0%
!! TTCTAGCTAACTACATTAAT+GGG - chr1.4:72628306-72628325 MS.gene20016:intron 25.0%
!! TTTGGTTGTGTATATTTTGT+AGG - chr1.4:72626050-72626069 MS.gene20016:CDS 25.0%
!!! AAGTTTGTTCTTGTTTCTAA+AGG - chr1.4:72625951-72625970 MS.gene20016:CDS 25.0%
!!! CAATTCTTGTGCAATTTTTT+AGG - chr1.4:72628151-72628170 MS.gene20016:CDS 25.0%
!!! CACTTTAGAAACAATTTTGA+AGG + chr1.4:72627610-72627629 None:intergenic 25.0%
!!! TTTTGTTTCACTTTATGAAG+AGG - chr1.4:72627515-72627534 MS.gene20016:intron 25.0%
AAGAAGGATGAGTATATTTG+TGG + chr1.4:72628372-72628391 None:intergenic 30.0%
ACCTATGTCTATTATGAAAG+AGG + chr1.4:72628640-72628659 None:intergenic 30.0%
AGATAAAAACACAATGGCAT+TGG - chr1.4:72627230-72627249 MS.gene20016:intron 30.0%
AGATGGGCAAAATACTATAT+AGG - chr1.4:72626834-72626853 MS.gene20016:CDS 30.0%
ATATGAGTAGGAATCAAACT+CGG + chr1.4:72626442-72626461 None:intergenic 30.0%
ATTGAAAACTGTCCTTTCTT+TGG + chr1.4:72628889-72628908 None:intergenic 30.0%
ATTGGCAAAATGAAATCTAG+AGG + chr1.4:72629033-72629052 None:intergenic 30.0%
CAAACAAGGCATAATCTATT+GGG - chr1.4:72629083-72629102 MS.gene20016:intron 30.0%
CACAACTAAATAGTTGTGTT+TGG + chr1.4:72628057-72628076 None:intergenic 30.0%
CATTTGACAACATCTATTGT+GGG - chr1.4:72626095-72626114 MS.gene20016:CDS 30.0%
GGATACAAAATCTATTCTAG+AGG + chr1.4:72627980-72627999 None:intergenic 30.0%
GTAAGGAGATAAAAACACAA+TGG - chr1.4:72627224-72627243 MS.gene20016:intron 30.0%
TATTGGGTGAATACATTGAT+TGG - chr1.4:72629099-72629118 MS.gene20016:CDS 30.0%
TCATTTGACAACATCTATTG+TGG - chr1.4:72626094-72626113 MS.gene20016:CDS 30.0%
TCCTCTTTCATAATAGACAT+AGG - chr1.4:72628636-72628655 MS.gene20016:intron 30.0%
TCTAGCTAACTACATTAATG+GGG - chr1.4:72628307-72628326 MS.gene20016:intron 30.0%
TCTCATGAAGATAAACTGTT+TGG - chr1.4:72627365-72627384 MS.gene20016:intron 30.0%
TGGATACATTCACTGAAAAA+TGG + chr1.4:72627695-72627714 None:intergenic 30.0%
TTGGTTATTCTAAACTCACA+AGG + chr1.4:72628103-72628122 None:intergenic 30.0%
! ATATAGTATTTTGCCCATCT+TGG + chr1.4:72626834-72626853 None:intergenic 30.0%
! GATATGGCTAGAGATATTTT+AGG - chr1.4:72626281-72626300 MS.gene20016:intron 30.0%
! GTGTATATTTTGTAGGATCA+TGG - chr1.4:72626057-72626076 MS.gene20016:CDS 30.0%
! TCAATTTTGCGATTCAAACT+CGG - chr1.4:72628448-72628467 MS.gene20016:intron 30.0%
! TCTAGATTTCATTTTGCCAA+TGG - chr1.4:72629032-72629051 MS.gene20016:intron 30.0%
!! TCTCTGAAATTGTATACAGT+AGG + chr1.4:72626691-72626710 None:intergenic 30.0%
!!! CCTCAATTTTAGTTGTGATA+GGG - chr1.4:72629130-72629149 MS.gene20016:CDS 30.0%
!!! CTCAATTTTAGTTGTGATAG+GGG - chr1.4:72629131-72629150 MS.gene20016:CDS 30.0%
!!! TCAATTTTAGTTGTGATAGG+GGG - chr1.4:72629132-72629151 MS.gene20016:CDS 30.0%
!!! TCCTCAATTTTAGTTGTGAT+AGG - chr1.4:72629129-72629148 MS.gene20016:CDS 30.0%
!!! TGCAATTTTTTAGGCAACTT+TGG - chr1.4:72628160-72628179 MS.gene20016:CDS 30.0%
AACAAGATGCAAAACTAACC+TGG + chr1.4:72627451-72627470 None:intergenic 35.0%
AAGAACTATTGCTTCCCAAA+TGG - chr1.4:72628336-72628355 MS.gene20016:intron 35.0%
AATAATCCCACTAGCATATG+TGG + chr1.4:72627420-72627439 None:intergenic 35.0%
AATGTATCTCAAGGAGTGAA+AGG + chr1.4:72627137-72627156 None:intergenic 35.0%
CCAAACAAGGCATAATCTAT+TGG - chr1.4:72629082-72629101 MS.gene20016:intron 35.0%
CCAAACAATGCCATTATATC+TGG + chr1.4:72628994-72629013 None:intergenic 35.0%
CCAGATATAATGGCATTGTT+TGG - chr1.4:72628991-72629010 MS.gene20016:intron 35.0%
CCAGTTTAGATTCAGAGATA+TGG - chr1.4:72626265-72626284 MS.gene20016:intron 35.0%
CCATATCTCTGAATCTAAAC+TGG + chr1.4:72626268-72626287 None:intergenic 35.0%
CCCTATCACAACTAAAATTG+AGG + chr1.4:72629133-72629152 None:intergenic 35.0%
GAAATTGTATACAGTAGGCA+AGG + chr1.4:72626686-72626705 None:intergenic 35.0%
GCCATTATATCTGGAAAGAA+TGG + chr1.4:72628985-72629004 None:intergenic 35.0%
GCCATTCTTTCCAGATATAA+TGG - chr1.4:72628981-72629000 MS.gene20016:intron 35.0%
GTGAAGGGAAAAATGTTCAA+AGG - chr1.4:72628191-72628210 MS.gene20016:CDS 35.0%
GTGGTCAAGAAAAACCATTT+GGG + chr1.4:72628353-72628372 None:intergenic 35.0%
TAAAGCTTCATTGATCCTTC+TGG + chr1.4:72627061-72627080 None:intergenic 35.0%
TATCTCTGAATCTAAACTGG+CGG + chr1.4:72626265-72626284 None:intergenic 35.0%
TCAATCCAAAGACTTGAAGA+AGG + chr1.4:72628388-72628407 None:intergenic 35.0%
TGTGGTCAAGAAAAACCATT+TGG + chr1.4:72628354-72628373 None:intergenic 35.0%
TGTTGCTATCTCTGGTTATT+GGG - chr1.4:72628256-72628275 MS.gene20016:intron 35.0%
TTGCTTGAAAATGTTGTGAC+AGG - chr1.4:72626807-72626826 MS.gene20016:CDS 35.0%
! AATGGAAGTGTAAGAATCAC+TGG + chr1.4:72626122-72626141 None:intergenic 35.0%
! ATTTTCGGAGATCCAAAGAA+AGG - chr1.4:72628874-72628893 MS.gene20016:CDS 35.0%
! CAATTTTGCGATTCAAACTC+GGG - chr1.4:72628449-72628468 MS.gene20016:intron 35.0%
! CCAATAGATTATGCCTTGTT+TGG + chr1.4:72629085-72629104 None:intergenic 35.0%
! CCATTTTCATTCACTCTTCT+GGG - chr1.4:72626137-72626156 MS.gene20016:CDS 35.0%
! CCTTTTACAGAATACTCTCT+CGG + chr1.4:72627344-72627363 None:intergenic 35.0%
! GACTAAATTGGTGATTCTCT+CGG + chr1.4:72626487-72626506 None:intergenic 35.0%
! TATTTCAGTGTTGCTATCTC+TGG - chr1.4:72628248-72628267 MS.gene20016:intron 35.0%
! TCCATTTTCATTCACTCTTC+TGG - chr1.4:72626136-72626155 MS.gene20016:CDS 35.0%
! TGAATACATTGATTGGAGGA+GGG - chr1.4:72629106-72629125 MS.gene20016:CDS 35.0%
! TGATGAGTTGCTTTCTTTGT+TGG - chr1.4:72626717-72626736 MS.gene20016:CDS 35.0%
! TGGAGTTGTAACTATGCTTT+TGG - chr1.4:72627099-72627118 MS.gene20016:intron 35.0%
! TGTATGTTTGGTTCCTCTTT+CGG + chr1.4:72628004-72628023 None:intergenic 35.0%
! TTGAACATTTTTCCCTTCAC+AGG + chr1.4:72628191-72628210 None:intergenic 35.0%
!! AAACTGTTTGGTGTCTTCAA+TGG - chr1.4:72627377-72627396 MS.gene20016:intron 35.0%
!! AATTGACTGTGTTGATTGCA+TGG - chr1.4:72627288-72627307 MS.gene20016:intron 35.0%
!! ATATGCTTTGGGACAGTAAT+TGG - chr1.4:72626873-72626892 MS.gene20016:intron 35.0%
!! TAGATTATGCCTTGTTTGGA+AGG + chr1.4:72629081-72629100 None:intergenic 35.0%
ACTTTCAAGCCTTCCAAACA+AGG - chr1.4:72629069-72629088 MS.gene20016:intron 40.0%
ATCCTTCTGGATGGTAAAGT+TGG + chr1.4:72627048-72627067 None:intergenic 40.0%
ATCTAACTCAGGTGAAGTAG+AGG + chr1.4:72625922-72625941 None:intergenic 40.0%
ATCTCTGGTTATTGGGCATT+TGG - chr1.4:72628263-72628282 MS.gene20016:intron 40.0%
ATTGCTACCACATATGCTAG+TGG - chr1.4:72627410-72627429 MS.gene20016:intron 40.0%
CAACATTGCTGCAAAAAGTG+TGG + chr1.4:72628962-72628981 None:intergenic 40.0%
CCCAGAAGAGTGAATGAAAA+TGG + chr1.4:72626140-72626159 None:intergenic 40.0%
CTCATCCTTCTTCAAGTCTT+TGG - chr1.4:72628380-72628399 MS.gene20016:intron 40.0%
GCAAAACTAACCTGGATTTC+TGG + chr1.4:72627443-72627462 None:intergenic 40.0%
GTTTGGAGGAGTAATTTGGT+TGG - chr1.4:72626163-72626182 MS.gene20016:CDS 40.0%
TACCAACTTTACCATCCAGA+AGG - chr1.4:72627043-72627062 MS.gene20016:intron 40.0%
TATCTCAAGGAGTGAAAGGA+TGG + chr1.4:72627133-72627152 None:intergenic 40.0%
TATGCAACATTTCTCACCGT+CGG - chr1.4:72627187-72627206 MS.gene20016:intron 40.0%
TCAAGTCTTTGGATTGACTG+CGG - chr1.4:72628391-72628410 MS.gene20016:intron 40.0%
TGGGATTATTCCAGAAATCC+AGG - chr1.4:72627430-72627449 MS.gene20016:intron 40.0%
TGGGCATTTGGAAATGAATC+TGG - chr1.4:72628275-72628294 MS.gene20016:intron 40.0%
TTGCTACCACATATGCTAGT+GGG - chr1.4:72627411-72627430 MS.gene20016:intron 40.0%
TTTACAGAATACTCTCTCGG+CGG + chr1.4:72627341-72627360 None:intergenic 40.0%
TTTCATTCACTCTTCTGGGT+TGG - chr1.4:72626141-72626160 MS.gene20016:CDS 40.0%
! AACATTTTTCCCTTCACAGG+AGG + chr1.4:72628188-72628207 None:intergenic 40.0%
! GATTTTGTATCCTCCGAAAG+AGG - chr1.4:72627988-72628007 MS.gene20016:CDS 40.0%
! GTGAATACATTGATTGGAGG+AGG - chr1.4:72629105-72629124 MS.gene20016:CDS 40.0%
! GTGTTGCTATCTCTGGTTAT+TGG - chr1.4:72628255-72628274 MS.gene20016:intron 40.0%
! GTTGCTTTCTTTGTTGGACA+CGG - chr1.4:72626723-72626742 MS.gene20016:CDS 40.0%
! TGGGTGAATACATTGATTGG+AGG - chr1.4:72629102-72629121 MS.gene20016:CDS 40.0%
!! CCGAGAGAGTATTCTGTAAA+AGG - chr1.4:72627341-72627360 MS.gene20016:intron 40.0%
!! GACTCACTTTTGTGTGTACT+TGG - chr1.4:72627736-72627755 MS.gene20016:intron 40.0%
!! GTTGGTTTGGAGGAGTAATT+TGG - chr1.4:72626159-72626178 MS.gene20016:CDS 40.0%
!! TGTTTCGAACCTTTGAAGCA+CGG + chr1.4:72626779-72626798 None:intergenic 40.0%
!! TTTGTGTGTACTTGGTTCTG+CGG - chr1.4:72627744-72627763 MS.gene20016:intron 40.0%
AATGCGCAATGTTGTGCCAA+GGG - chr1.4:72628906-72628925 MS.gene20016:CDS 45.0%
ACTTCACCTGAGTTAGATGC+AGG - chr1.4:72625924-72625943 MS.gene20016:CDS 45.0%
ATGTTGTGACAGGACCAAGA+TGG - chr1.4:72626817-72626836 MS.gene20016:CDS 45.0%
GCTTCATTGATCCTTCTGGA+TGG + chr1.4:72627057-72627076 None:intergenic 45.0%
GTAGGATCATGGTTACACTG+TGG - chr1.4:72626068-72626087 MS.gene20016:CDS 45.0%
GTGATTCTCTCGGTTCAATC+AGG + chr1.4:72626477-72626496 None:intergenic 45.0%
TCATTGGACCACTAGTGCTA+AGG - chr1.4:72626362-72626381 MS.gene20016:intron 45.0%
TGTTGTGACAGGACCAAGAT+GGG - chr1.4:72626818-72626837 MS.gene20016:CDS 45.0%
TTCTTTGTTGGACACGGACA+TGG - chr1.4:72626729-72626748 MS.gene20016:CDS 45.0%
TTGATTGCATGGTCCAATGC+AGG - chr1.4:72627299-72627318 MS.gene20016:intron 45.0%
TTGGAACATCATGCTCAGCT+TGG - chr1.4:72626236-72626255 MS.gene20016:intron 45.0%
TTTGCTCCTGCATCTAACTC+AGG + chr1.4:72625933-72625952 None:intergenic 45.0%
! AGTAATTGGTGGTCCTCTTG+TGG - chr1.4:72626887-72626906 MS.gene20016:intron 45.0%
! ATCTTTCGAGTGACCTGCAT+TGG + chr1.4:72627315-72627334 None:intergenic 45.0%
! ATGTTTGGTTCCTCTTTCGG+AGG + chr1.4:72628001-72628020 None:intergenic 45.0%
! GTAATTGGTGGTCCTCTTGT+GGG - chr1.4:72626888-72626907 MS.gene20016:intron 45.0%
! GTAATTTGGTTGGTCCTTGC+AGG - chr1.4:72626173-72626192 MS.gene20016:CDS 45.0%
!! TGCTTTGGGACAGTAATTGG+TGG - chr1.4:72626876-72626895 MS.gene20016:intron 45.0%
!! TTCACTCTTCTGGGTTGGTT+TGG - chr1.4:72626146-72626165 MS.gene20016:CDS 45.0%
AACTTTGGCACCTCCTGTGA+AGG - chr1.4:72628175-72628194 MS.gene20016:CDS 50.0%
ACTTTGGCACCTCCTGTGAA+GGG - chr1.4:72628176-72628195 MS.gene20016:CDS 50.0%
AGAATGTGATCGCTCCTGCA+AGG + chr1.4:72626190-72626209 None:intergenic 50.0%
AGACTCTTTCCTCCCACAAG+AGG + chr1.4:72626903-72626922 None:intergenic 50.0%
CAATGCGCAATGTTGTGCCA+AGG - chr1.4:72628905-72628924 MS.gene20016:CDS 50.0%
GGTGACACGTCTAATTCCAG+AGG - chr1.4:72626750-72626769 MS.gene20016:CDS 50.0%
TAAGGTCTAGCGCAAGTGGT+TGG - chr1.4:72626380-72626399 MS.gene20016:intron 50.0%
TGTGGGAGGAAAGAGTCTCA+AGG - chr1.4:72626905-72626924 MS.gene20016:intron 50.0%
TTGCGATTCAAACTCGGGTG+CGG - chr1.4:72628454-72628473 MS.gene20016:intron 50.0%
!! ACTCTTCTGGGTTGGTTTGG+AGG - chr1.4:72626149-72626168 MS.gene20016:CDS 50.0%
!! ATTGACCTAGAGAGCACCCT+TGG + chr1.4:72628925-72628944 None:intergenic 50.0%
ACCGACGTATATCGAGCCGA+CGG + chr1.4:72627206-72627225 None:intergenic 55.0%
CGGCTCGATATACGTCGGTA+AGG - chr1.4:72627207-72627226 MS.gene20016:intron 55.0%
GCGCTAGACCTTAGCACTAG+TGG + chr1.4:72626373-72626392 None:intergenic 55.0%
GTGCTAAGGTCTAGCGCAAG+TGG - chr1.4:72626376-72626395 MS.gene20016:intron 55.0%
TGCGATTCAAACTCGGGTGC+GGG - chr1.4:72628455-72628474 MS.gene20016:intron 55.0%
TTCAAACTCGGGTGCGGGTT+TGG - chr1.4:72628460-72628479 MS.gene20016:intron 55.0%
! ATTGGTGGTCCTCTTGTGGG+AGG - chr1.4:72626891-72626910 MS.gene20016:intron 55.0%
!! ACCGTCGGCTCGATATACGT+CGG - chr1.4:72627202-72627221 MS.gene20016:intron 55.0%
!! CAGAGGTGTCCGTGCTTCAA+AGG - chr1.4:72626767-72626786 MS.gene20016:CDS 55.0%
!! CTTTGAAGCACGGACACCTC+TGG + chr1.4:72626769-72626788 None:intergenic 55.0%
!! TTGTGCCAAGGGTGCTCTCT+AGG - chr1.4:72628917-72628936 MS.gene20016:CDS 55.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 72625843 72629218 72625843 ID=MS.gene20016
chr1.4 mRNA 72625843 72629218 72625843 ID=MS.gene20016.t1;Parent=MS.gene20016
chr1.4 exon 72629089 72629218 72629089 ID=MS.gene20016.t1.exon1;Parent=MS.gene20016.t1
chr1.4 CDS 72629089 72629218 72629089 ID=cds.MS.gene20016.t1;Parent=MS.gene20016.t1
chr1.4 exon 72628759 72628989 72628759 ID=MS.gene20016.t1.exon2;Parent=MS.gene20016.t1
chr1.4 CDS 72628759 72628989 72628759 ID=cds.MS.gene20016.t1;Parent=MS.gene20016.t1
chr1.4 exon 72628135 72628232 72628135 ID=MS.gene20016.t1.exon3;Parent=MS.gene20016.t1
chr1.4 CDS 72628135 72628232 72628135 ID=cds.MS.gene20016.t1;Parent=MS.gene20016.t1
chr1.4 exon 72627838 72628024 72627838 ID=MS.gene20016.t1.exon4;Parent=MS.gene20016.t1
chr1.4 CDS 72627838 72628024 72627838 ID=cds.MS.gene20016.t1;Parent=MS.gene20016.t1
chr1.4 exon 72627610 72627740 72627610 ID=MS.gene20016.t1.exon5;Parent=MS.gene20016.t1
chr1.4 CDS 72627610 72627740 72627610 ID=cds.MS.gene20016.t1;Parent=MS.gene20016.t1
chr1.4 exon 72626649 72626888 72626649 ID=MS.gene20016.t1.exon6;Parent=MS.gene20016.t1
chr1.4 CDS 72626649 72626888 72626649 ID=cds.MS.gene20016.t1;Parent=MS.gene20016.t1
chr1.4 exon 72625843 72626223 72625843 ID=MS.gene20016.t1.exon7;Parent=MS.gene20016.t1
chr1.4 CDS 72625843 72626223 72625843 ID=cds.MS.gene20016.t1;Parent=MS.gene20016.t1
Gene Sequence

>MS.gene20016

ATGGGAACTGCTGCTCAAAGCTCTTCAGAAATATATACAAGTGATAGTGAAAAGGGTTTTGCAATCAATCATGAGTCCTCTACTTCACCTGAGTTAGATGCAGGAGCAAAGTTTGTTCTTGTTTCTAAAGGTTAGTATTGAATTATTGAACTATATATTATTACTTTGTTATGTTATGTTATGTTGATTAATTAATTTACTATATGGTTTGGTTGTGTATATTTTGTAGGATCATGGTTACACTGTGGTTATCATTTGACAACATCTATTGTGGGACCAGTGATTCTTACACTTCCATTTTCATTCACTCTTCTGGGTTGGTTTGGAGGAGTAATTTGGTTGGTCCTTGCAGGAGCGATCACATTCTATTCATATAATCTTTTATCTATTGTCTTGGAACATCATGCTCAGCTTGGTCGCCGCCAGTTTAGATTCAGAGATATGGCTAGAGATATTTTAGGTGAATTTCTATTCACTTTCCTTTTAATACTTTTCTTTCTTTTTCATTGTTGTTATTAATCATTGGACCACTAGTGCTAAGGTCTAGCGCAAGTGGTTGGTGCATAGTGTGTGTGAGTGTTGTAAACATCAAAGTGCCGAGTTTGATTCCTACTCATATAAGCACAATATTCCTGATTGAACCGAGAGAATCACCAATTTAGTCACTTTAAGTTACAATTTAGTTTCTGAAATGATCGTTGAAATTGAAAATTCGTAATCGCATTAGTCTTTCTAAAACAATTTTAGAGACTAAATCGACTCGCTCAAAACGACTAATGTAATTAAGAATTTTCAATTTAAGAAATCATTTTGTAAAATTGAGATTGAAACTTTTAAGTACCTTGCCTACTGTATACAATTTCAGAGACTAAATTGATGAGTTGCTTTCTTTGTTGGACACGGACATGGTGACACGTCTAATTCCAGAGGTGTCCGTGCTTCAAAGGTTCGAAACATTCTTAATTTGCTTGAAAATGTTGTGACAGGACCAAGATGGGCAAAATACTATATAGGCCCTCTTCAATTTATCATATGCTTTGGGACAGTAATTGGTGGTCCTCTTGTGGGAGGAAAGAGTCTCAAGGTAATAACATAAAAAGGTTCATTTCATTTTCTCTTTATAGTTTATAACTTTGTCCACATTCTTATACTATAGTTTCACTAAGGTGCTACATTTTTCTTCTTCTATTGCAGTTCATTTACCAACTTTACCATCCAGAAGGATCAATGAAGCTTTACCAATTTATCATTATATGTGGAGTTGTAACTATGCTTTTGGCTCAGCTTCCATCCTTTCACTCCTTGAGATACATTAATCTGATTTCTCTGATTCTCTGTGTGACTTATGCAACATTTCTCACCGTCGGCTCGATATACGTCGGTAAGGAGATAAAAACACAATGGCATTGGCAATGTATGACAGAAATTTGTACTGTGATTCATTCAATTGACTGTGTTGATTGCATGGTCCAATGCAGGTCACTCGAAAGATGCGCCGCCGAGAGAGTATTCTGTAAAAGGTTCTCATGAAGATAAACTGTTTGGTGTCTTCAATGGTATTTCAATCATTGCTACCACATATGCTAGTGGGATTATTCCAGAAATCCAGGTTAGTTTTGCATCTTGTTAGTCTTTTTTTAGAGAACAAATGTTGTAAATGGAATCAAATATGTTTTGTTTCACTTTATGAAGAGGCAAAATTCATTCTATAGATGTAGAATTGATTTTGACATTTTTGGATGTTCTCGAGTAGAACTGATTTTGCCTTCAAAATTGTTTCTAAAGTGAAGCTAGCATTCAAAGTTTTTGCCTCTACAATCGATTTTTAACTTCAAATTTATTGTTCAATCCATTTTTCAGTGAATGTATCCAAATCAAAATCACTTTACATTGGACTCACTTTTGTGTGTACTTGGTTCTGCGGTGAAAAATGATTATTTTGAATGAATCAATTTTGACTAAAAGTGAGTTAAATGTTAAACGGTTAACGTCTTGATACATTCATGTAAATGTGAAAGCTAAAAATCAATTGAAGAGGCAAAAACTCCAAATTCTAACTTCAAGTTAGAATCAATTTTAAACGCAAAATCAGTTCTACTCGAAAACATTCCAAGATGTCATAATCAATTCTACACCTCTAGAATAGATTTTGTATCCTCCGAAAGAGGAACCAAACATACATATCTAGAATCAAATTTTGTCACAGCAGAACCAAACACAACTATTTAGTTGTGACAGAATAAGAATCAATTGATATCCTTGTGAGTTTAGAATAACCAAAAATATATGTCAAGTGACTAACTAAATACAATTCTTGTGCAATTTTTTAGGCAACTTTGGCACCTCCTGTGAAGGGAAAAATGTTCAAAGGACTATGTGTGTGTTATTCTGTTATAGTAGCTACATATTTCAGTGTTGCTATCTCTGGTTATTGGGCATTTGGAAATGAATCTGGTGCAACAATTCTAGCTAACTACATTAATGGGGAGACAAAAGAACTATTGCTTCCCAAATGGTTTTTCTTGACCACAAATATACTCATCCTTCTTCAAGTCTTTGGATTGACTGCGGTAAGAACGCCCAAACTGTTATGCATATACATTTGTCAATTTTGCGATTCAAACTCGGGTGCGGGTTTGGAAGAACTTATTTATAGCTTAGTTGGACTTATCTTATAACATAAATGTACATGTTACTGTTTGGAAGAGTTTATTGAAAGAGTTTATGTTATGTTGGTAAACTGCCTTGAGCTTATTTCAATAAATCTTCGATGGATAGCTTATGAAACAAGATTCCTCTTTCATAATAGACATAGGTCATGTTTGTATAATTAACTTCATCAAGCGCTTATAGCATAAGACCTTATTATATAGTAATGCTTCTGCATAAGCTATGTTTTTGACAAAAGATAAAATAAAGTCAAACTATTTTCATATAAGCTACTTTCACACGCTTCACTTTCCTGATGAATGATTATAACTTGATTATATTGCAGGTATATCTTCAACCAACAAATGAATTATTTGAATCAATTTTCGGAGATCCAAAGAAAGGACAGTTTTCAATGCGCAATGTTGTGCCAAGGGTGCTCTCTAGGTCAATATCAGTAGCAGCAGCCACACTTTTTGCAGCAATGTTGCCATTCTTTCCAGATATAATGGCATTGTTTGGAGCATTTGCATTCATTCCTCTAGATTTCATTTTGCCAATGGTTTTTTACAATATAACTTTCAAGCCTTCCAAACAAGGCATAATCTATTGGGTGAATACATTGATTGGAGGAGGGTCCTCAATTTTAGTTGTGATAGGGGGAATAGCATCAATTAGACAAATAGTTCTTGATGCTAAAACGTATAGTTTATTTTCTGATTCCTGA
Protein sequence

>MS.gene20016.t1

MGTAAQSSSEIYTSDSEKGFAINHESSTSPELDAGAKFVLVSKGSWLHCGYHLTTSIVGPVILTLPFSFTLLGWFGGVIWLVLAGAITFYSYNLLSIVLEHHAQLGRRQFRFRDMARDILGPRWAKYYIGPLQFIICFGTVIGGPLVGGKSLKFIYQLYHPEGSMKLYQFIIICGVVTMLLAQLPSFHSLRYINLISLILCVTYATFLTVGSIYVGHSKDAPPREYSVKGSHEDKLFGVFNGISIIATTYASGIIPEIQATLAPPVKGKMFKGLCVCYSVIVATYFSVAISGYWAFGNESGATILANYINGETKELLLPKWFFLTTNILILLQVFGLTAVYLQPTNELFESIFGDPKKGQFSMRNVVPRVLSRSISVAAATLFAAMLPFFPDIMALFGAFAFIPLDFILPMVFYNITFKPSKQGIIYWVNTLIGGGSSILVVIGGIASIRQIVLDAKTYSLFSDS