AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20127

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20127.t1 MTR_5g010750 98.965 483 5 0 1 483 1 483 0.0 1002
MS.gene20127.t1 MTR_5g010750 98.869 442 5 0 1 442 1 442 0.0 912
MS.gene20127.t1 MTR_5g082520 35.714 448 280 4 30 474 27 469 5.16e-101 311
MS.gene20127.t1 MTR_8g077810 35.778 450 271 7 31 467 33 477 7.29e-100 309
MS.gene20127.t1 MTR_5g020020 35.232 474 288 9 6 467 11 477 1.11e-99 308
MS.gene20127.t1 MTR_3g070380 34.889 450 279 6 30 472 28 470 9.88e-96 298
MS.gene20127.t1 MTR_3g007320 33.761 468 294 11 5 468 7 462 4.91e-95 295
MS.gene20127.t1 MTR_6g015910 34.188 468 290 12 6 468 8 462 1.01e-94 295
MS.gene20127.t1 MTR_7g016040 32.196 469 307 7 1 468 3 461 8.30e-92 287
MS.gene20127.t1 MTR_8g076510 34.048 420 262 5 32 443 40 452 1.05e-87 277
MS.gene20127.t1 MTR_5g021220 31.670 461 296 5 2 443 3 463 6.37e-84 267
MS.gene20127.t1 MTR_7g033040 32.432 481 306 10 3 475 8 477 1.53e-83 266
MS.gene20127.t1 MTR_8g016180 31.042 451 293 6 2 443 5 446 4.95e-82 262
MS.gene20127.t1 MTR_6g069000 32.624 423 268 7 29 442 38 452 4.40e-76 246
MS.gene20127.t1 MTR_6g069000 32.624 423 268 7 29 442 48 462 6.11e-76 246
MS.gene20127.t1 MTR_4g086130 30.602 415 279 5 30 443 34 440 1.05e-71 235
MS.gene20127.t1 MTR_5g025610 30.045 446 291 11 3 443 6 435 3.70e-70 231
MS.gene20127.t1 MTR_6g034940 31.501 473 303 9 2 460 10 475 2.82e-69 229
MS.gene20127.t1 MTR_8g016180 30.383 418 267 6 2 406 5 411 5.08e-69 226
MS.gene20127.t1 MTR_5g025610 29.888 445 291 11 3 442 6 434 6.62e-69 227
MS.gene20127.t1 MTR_8g072260 29.111 450 299 10 27 470 30 465 4.20e-68 225
MS.gene20127.t1 MTR_0045s0060 30.095 422 282 6 30 446 39 452 3.76e-67 223
MS.gene20127.t1 MTR_0045s0070 30.569 422 280 7 30 446 39 452 1.30e-66 222
MS.gene20127.t1 MTR_2g031930 28.947 456 306 7 1 442 4 455 7.19e-66 219
MS.gene20127.t1 MTR_8g072260 29.762 420 276 9 28 442 31 436 2.62e-65 218
MS.gene20127.t1 MTR_2g031930 28.947 456 306 7 1 442 8 459 3.21e-65 218
MS.gene20127.t1 MTR_0045s0070 30.383 418 278 7 30 442 39 448 3.30e-65 217
MS.gene20127.t1 MTR_5g020020 35.821 335 197 8 144 467 76 403 3.33e-65 216
MS.gene20127.t1 MTR_8g089800 28.510 463 310 8 2 446 5 464 1.10e-64 217
MS.gene20127.t1 MTR_4g086040 30.594 438 290 7 30 464 37 463 5.77e-64 215
MS.gene20127.t1 MTR_5g014250 28.850 461 308 9 2 446 9 465 2.16e-63 214
MS.gene20127.t1 MTR_2g031920 27.447 470 320 8 1 453 4 469 1.67e-62 211
MS.gene20127.t1 MTR_1g019410 28.764 445 300 8 6 442 5 440 5.78e-62 209
MS.gene20127.t1 MTR_3g467130 27.512 418 297 3 31 443 33 449 6.01e-62 209
MS.gene20127.t1 MTR_5g091760 27.511 458 318 8 20 470 27 477 6.65e-62 209
MS.gene20127.t1 MTR_1g037580 28.989 445 307 5 28 471 41 477 8.71e-62 209
MS.gene20127.t1 MTR_5g092150 27.169 438 312 4 23 455 21 456 1.08e-60 206
MS.gene20127.t1 MTR_3g112120 26.923 468 323 8 23 476 31 493 5.16e-60 205
MS.gene20127.t1 MTR_0045s0060 29.101 378 259 4 70 446 1 370 9.09e-60 201
MS.gene20127.t1 MTR_3g467140 27.938 451 302 5 31 467 33 474 1.75e-59 203
MS.gene20127.t1 MTR_8g100135 27.725 422 296 5 31 446 34 452 2.78e-59 202
MS.gene20127.t1 MTR_8g012970 29.139 453 302 10 1 442 13 457 6.42e-59 202
MS.gene20127.t1 MTR_5g025610 28.250 400 273 9 3 399 6 394 1.73e-57 196
MS.gene20127.t1 MTR_7g016040 29.863 365 246 6 1 364 3 358 2.08e-56 192
MS.gene20127.t1 MTR_4g005230 29.048 420 283 9 31 442 43 455 1.05e-55 193
MS.gene20127.t1 MTR_0045s0080 29.688 384 252 7 30 407 39 410 3.19e-55 190
MS.gene20127.t1 MTR_8g072260 28.382 377 254 7 28 399 31 396 2.18e-54 189
MS.gene20127.t1 MTR_1g032950 27.045 440 294 9 12 442 24 445 1.85e-52 184
MS.gene20127.t1 MTR_5g014240 27.983 461 311 10 2 446 9 464 1.03e-51 182
MS.gene20127.t1 MTR_8g076940 25.935 428 303 6 22 443 37 456 6.06e-48 172
MS.gene20127.t1 MTR_8g089190 26.415 424 295 10 31 444 1 417 4.59e-45 164
MS.gene20127.t1 MTR_8g100135 26.000 350 252 4 31 374 34 382 7.14e-41 151
MS.gene20127.t1 MTR_3g467140 26.857 350 233 5 132 467 1 341 1.06e-37 141
MS.gene20127.t1 MTR_8g076940 23.698 384 282 5 22 399 37 415 3.75e-36 139
MS.gene20127.t1 MTR_8g089190 24.929 353 249 9 31 373 1 347 4.35e-30 120
MS.gene20127.t1 MTR_1g032980 24.390 328 237 6 31 350 16 340 2.52e-27 113
MS.gene20127.t1 MTR_8g076940 23.056 360 262 6 22 371 37 391 1.38e-25 108
MS.gene20127.t1 MTR_8g076940 22.636 349 259 5 22 364 37 380 1.98e-25 108
MS.gene20127.t1 MTR_7g079440 23.165 436 298 9 67 470 218 648 4.80e-22 100
MS.gene20127.t1 MTR_5g018980 24.283 453 291 16 30 443 33 472 3.97e-21 96.7
MS.gene20127.t1 MTR_4g089020 23.110 463 317 14 9 444 10 460 1.08e-20 95.1
MS.gene20127.t1 MTR_0181s0030 23.139 497 314 18 12 462 15 489 1.17e-20 95.1
MS.gene20127.t1 MTR_4g102310 23.991 446 293 20 31 443 39 471 1.42e-20 94.7
MS.gene20127.t1 MTR_4g104610 21.206 481 327 17 1 443 1 467 1.10e-19 92.0
MS.gene20127.t1 MTR_4g029690 23.127 307 216 7 11 305 23 321 5.30e-19 88.2
MS.gene20127.t1 MTR_5g094540 22.128 470 326 14 3 444 10 467 5.63e-19 90.1
MS.gene20127.t1 MTR_8g091690 25.217 460 270 17 22 444 19 441 6.01e-19 89.7
MS.gene20127.t1 MTR_2g073440 21.909 461 315 12 23 460 25 463 2.77e-18 87.8
MS.gene20127.t1 MTR_4g089030 22.410 473 320 18 6 444 25 484 4.35e-18 87.4
MS.gene20127.t1 MTR_0457s0020 25.381 197 146 1 110 305 25 221 5.47e-18 83.2
MS.gene20127.t1 MTR_2g073480 23.839 323 222 8 153 460 83 396 5.99e-18 86.3
MS.gene20127.t1 MTR_5g045770 23.830 470 314 15 23 457 21 481 2.89e-17 84.7
MS.gene20127.t1 MTR_1g031700 22.271 458 296 17 30 449 33 468 2.91e-17 84.7
MS.gene20127.t1 MTR_2g019640 22.551 439 287 16 31 434 41 461 3.17e-17 84.7
MS.gene20127.t1 MTR_5g016440 21.806 454 314 11 30 456 30 469 3.86e-17 84.3
MS.gene20127.t1 MTR_1g055325 22.096 439 289 12 60 460 78 501 4.39e-17 84.3
MS.gene20127.t1 MTR_5g094560 19.960 496 354 15 3 470 10 490 4.85e-17 84.0
MS.gene20127.t1 MTR_1g492820 21.957 460 307 14 23 443 37 483 8.53e-17 83.2
MS.gene20127.t1 MTR_5g016410 22.173 451 296 15 31 446 32 462 1.02e-16 83.2
MS.gene20127.t1 MTR_5g094550 20.464 474 329 12 3 444 10 467 1.29e-16 82.8
MS.gene20127.t1 MTR_5g009110 27.027 259 144 7 219 441 141 390 3.26e-16 80.9
MS.gene20127.t1 MTR_8g020950 22.717 449 299 13 31 444 38 473 3.82e-16 81.3
MS.gene20127.t1 MTR_4g102280 26.506 249 159 9 222 451 242 485 3.91e-16 81.3
MS.gene20127.t1 MTR_5g094520 21.413 467 319 13 10 444 48 498 5.73e-16 80.9
MS.gene20127.t1 MTR_5g009110 27.027 259 144 7 219 441 289 538 5.77e-16 80.9
MS.gene20127.t1 MTR_1g097240 21.649 485 319 14 3 448 5 467 8.15e-16 80.1
MS.gene20127.t1 MTR_4g025970 22.173 451 313 13 23 443 21 463 1.10e-15 79.7
MS.gene20127.t1 MTR_1g107295 22.992 361 236 12 121 444 126 481 1.71e-15 79.3
MS.gene20127.t1 MTR_6g008640 28.947 228 139 8 226 435 263 485 1.88e-15 79.3
MS.gene20127.t1 MTR_4g104540 21.465 396 278 14 77 443 6 397 1.92e-15 78.6
MS.gene20127.t1 MTR_4g104550 21.142 473 332 17 21 463 17 478 2.04e-15 79.0
MS.gene20127.t1 MTR_3g058110 20.971 453 311 14 26 444 33 472 3.30e-15 78.2
MS.gene20127.t1 MTR_2g010300 22.004 509 311 21 8 472 7 473 4.37e-15 77.8
MS.gene20127.t1 MTR_7g056103 23.529 459 290 17 30 443 32 474 5.05e-15 77.8
MS.gene20127.t1 MTR_8g008530 26.104 249 161 8 213 443 247 490 5.69e-15 77.8
MS.gene20127.t1 MTR_7g012860 21.786 459 320 12 20 448 22 471 6.04e-15 77.4
MS.gene20127.t1 MTR_0287s0060 21.786 459 320 12 20 448 22 471 6.04e-15 77.4
MS.gene20127.t1 MTR_5g007460 23.195 457 294 16 27 444 5 443 6.59e-15 77.4
MS.gene20127.t1 MTR_8g466180 19.914 467 327 14 12 444 15 468 8.30e-15 77.0
MS.gene20127.t1 MTR_0022s0290 26.522 230 154 5 247 465 285 510 1.09e-14 76.6
MS.gene20127.t1 MTR_1g015860 21.519 474 294 15 33 444 41 498 1.10e-14 76.6
MS.gene20127.t1 MTR_4g062510 20.804 423 287 11 65 444 66 483 1.37e-14 76.6
MS.gene20127.t1 MTR_8g020960 22.555 501 277 17 11 444 17 473 2.16e-14 75.9
MS.gene20127.t1 MTR_7g103450 25.439 228 154 6 227 443 261 483 2.39e-14 75.9
MS.gene20127.t1 MTR_1g107300 29.697 165 109 3 283 444 9 169 2.60e-14 72.4
MS.gene20127.t1 MTR_0171s0030 24.706 255 156 8 222 450 147 391 2.79e-14 75.1
MS.gene20127.t1 MTR_4g025980 24.406 463 292 19 20 443 19 462 2.83e-14 75.5
MS.gene20127.t1 MTR_3g076560 22.198 464 313 15 19 449 39 487 3.34e-14 75.1
MS.gene20127.t1 MTR_5g019010 20.940 468 322 16 12 443 14 469 4.01e-14 75.1
MS.gene20127.t1 MTR_8g027040 24.268 239 170 5 220 452 289 522 5.28e-14 74.7
MS.gene20127.t1 MTR_2g073420 25.652 230 160 4 236 460 268 491 5.50e-14 74.3
MS.gene20127.t1 MTR_8g046240 22.698 467 292 19 29 451 39 480 8.91e-14 73.9
MS.gene20127.t1 MTR_1g091010 20.557 467 324 15 9 444 11 461 1.00e-13 73.6
MS.gene20127.t1 MTR_3g057800 21.749 446 308 15 28 444 33 466 1.08e-13 73.6
MS.gene20127.t1 MTR_5g094660 21.412 439 310 13 31 444 38 466 1.20e-13 73.6
MS.gene20127.t1 MTR_7g027960 20.949 506 336 17 2 460 8 496 1.84e-13 72.8
MS.gene20127.t1 MTR_7g028020 20.751 506 337 17 2 460 8 496 1.97e-13 72.8
MS.gene20127.t1 MTR_1g091023 20.127 472 328 15 7 444 6 462 2.10e-13 72.8
MS.gene20127.t1 MTR_5g095290 19.624 479 333 15 1 444 6 467 4.71e-13 71.6
MS.gene20127.t1 MTR_3g014880 26.316 228 147 8 233 446 280 500 4.89e-13 71.6
MS.gene20127.t1 MTR_3g057860 21.474 475 330 17 6 450 14 475 5.53e-13 71.2
MS.gene20127.t1 MTR_3g104560 20.641 499 323 14 8 444 19 506 7.07e-13 71.2
MS.gene20127.t1 MTR_0451s0010 27.184 206 125 8 246 436 90 285 8.01e-13 69.7
MS.gene20127.t1 MTR_1750s0010 30.000 150 98 3 280 426 5 150 8.57e-13 66.6
MS.gene20127.t1 MTR_4g104570 25.882 170 119 3 277 443 1 166 9.35e-13 67.4
MS.gene20127.t1 MTR_1g035830 22.306 529 325 24 3 470 4 507 9.45e-13 70.5
MS.gene20127.t1 MTR_1g031710 23.140 242 164 9 236 469 67 294 1.13e-12 69.3
MS.gene20127.t1 MTR_4g048580 21.616 495 335 14 9 472 20 492 1.55e-12 70.1
MS.gene20127.t1 MTR_4g071710 21.341 492 310 21 3 443 14 479 1.56e-12 70.1
MS.gene20127.t1 MTR_5g070710 22.321 448 297 17 26 436 31 464 1.59e-12 70.1
MS.gene20127.t1 MTR_5g070850 20.000 470 301 17 23 444 29 471 2.82e-12 69.3
MS.gene20127.t1 MTR_8g046210 23.077 468 299 19 24 451 34 480 4.02e-12 68.6
MS.gene20127.t1 MTR_2g010330 23.409 440 281 19 56 451 57 484 4.23e-12 68.6
MS.gene20127.t1 MTR_8g035780 25.417 240 157 7 226 444 243 481 4.40e-12 68.6
MS.gene20127.t1 MTR_8g035810 24.803 254 173 6 211 448 234 485 4.69e-12 68.6
MS.gene20127.t1 MTR_7g033570 20.759 395 283 10 106 470 100 494 1.60e-11 66.6
MS.gene20127.t1 MTR_4g113650 22.824 425 292 11 50 444 73 491 1.67e-11 66.6
MS.gene20127.t1 MTR_4g077210 24.576 236 170 4 226 457 251 482 1.88e-11 66.6
MS.gene20127.t1 MTR_1g442730 20.085 473 333 14 31 472 34 492 1.93e-11 66.6
MS.gene20127.t1 MTR_7g012330 24.107 224 158 5 230 448 254 470 2.02e-11 66.6
MS.gene20127.t1 MTR_4g095050 21.298 493 324 17 3 456 9 476 2.11e-11 66.2
MS.gene20127.t1 MTR_3g024520 26.238 202 138 3 256 450 282 479 2.33e-11 66.2
MS.gene20127.t1 MTR_2g450040 24.835 455 283 20 30 436 36 479 2.51e-11 66.2
MS.gene20127.t1 MTR_3g104560 23.109 238 174 3 213 444 137 371 4.41e-11 65.1
MS.gene20127.t1 MTR_6g042610 25.328 229 150 8 245 458 283 505 6.92e-11 64.7
MS.gene20127.t1 MTR_1g111240 22.148 447 279 19 67 470 97 517 7.05e-11 64.7
MS.gene20127.t1 MTR_4g005260 23.629 237 164 6 2 225 5 237 7.41e-11 62.8
MS.gene20127.t1 MTR_1g103680 21.339 478 323 17 1 444 7 465 9.41e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20127.t1 AT1G12740 74.468 470 120 0 1 470 1 470 0.0 754
MS.gene20127.t1 AT1G12740 73.739 476 119 1 1 470 1 476 0.0 749
MS.gene20127.t1 AT1G12740 73.529 476 120 1 1 470 1 476 0.0 748
MS.gene20127.t1 AT1G12740 73.901 364 95 0 1 364 1 364 0.0 569
MS.gene20127.t1 AT1G78490 40.717 474 277 4 3 473 7 479 1.49e-132 392
MS.gene20127.t1 AT5G48000 41.794 457 262 4 16 469 20 475 1.01e-131 390
MS.gene20127.t1 AT5G48000 41.794 457 262 4 16 469 20 475 1.01e-131 390
MS.gene20127.t1 AT5G48000 41.794 457 262 4 16 469 20 475 1.01e-131 390
MS.gene20127.t1 AT5G48000 41.794 457 262 4 16 469 20 475 1.01e-131 390
MS.gene20127.t1 AT5G48000 41.794 457 262 4 16 469 20 475 1.01e-131 390
MS.gene20127.t1 AT5G48000 41.794 457 262 4 16 469 20 475 1.01e-131 390
MS.gene20127.t1 AT5G48000 41.794 457 262 4 16 469 61 516 9.09e-131 389
MS.gene20127.t1 AT1G55940 40.833 480 272 8 1 469 13 491 1.12e-129 385
MS.gene20127.t1 AT1G55940 41.372 452 253 8 1 441 13 463 3.42e-124 370
MS.gene20127.t1 AT3G44970 38.397 474 283 6 7 473 8 479 1.12e-115 349
MS.gene20127.t1 AT1G78490 41.000 400 232 4 3 399 7 405 8.76e-110 332
MS.gene20127.t1 AT4G15300 35.870 460 287 6 15 472 19 472 4.29e-104 319
MS.gene20127.t1 AT4G15300 35.870 460 287 6 15 472 9 462 4.64e-104 318
MS.gene20127.t1 AT4G15310 35.356 478 297 9 1 472 4 475 1.73e-101 312
MS.gene20127.t1 AT1G65670 34.874 476 296 8 6 477 8 473 1.82e-97 302
MS.gene20127.t1 AT3G50660 34.576 483 276 8 23 468 31 510 5.36e-96 299
MS.gene20127.t1 AT4G15393 34.322 472 293 11 2 468 8 467 1.14e-95 297
MS.gene20127.t1 AT4G15396 34.565 460 290 8 19 474 23 475 1.95e-95 297
MS.gene20127.t1 AT4G15300 34.025 482 288 8 15 472 9 484 2.90e-95 296
MS.gene20127.t1 AT5G05690 35.440 443 280 5 31 471 31 469 1.88e-94 294
MS.gene20127.t1 AT4G15396 34.004 447 280 10 2 443 8 444 1.26e-90 284
MS.gene20127.t1 AT3G30180 33.121 471 298 8 3 468 5 463 1.16e-87 276
MS.gene20127.t1 AT3G19270 32.071 449 296 5 1 449 4 443 4.28e-87 275
MS.gene20127.t1 AT3G19270 31.603 443 295 4 1 443 4 438 7.07e-85 268
MS.gene20127.t1 AT4G15396 31.381 478 292 10 2 474 8 454 5.32e-83 264
MS.gene20127.t1 AT1G73340 32.667 450 285 6 30 471 42 481 7.75e-83 265
MS.gene20127.t1 AT4G36380 32.143 448 296 5 31 472 69 514 4.90e-82 263
MS.gene20127.t1 AT5G38970 31.423 471 306 8 3 468 5 463 1.46e-81 261
MS.gene20127.t1 AT3G50660 35.396 404 231 7 23 399 31 431 2.55e-80 256
MS.gene20127.t1 AT5G05690 35.753 372 234 4 31 401 31 398 1.07e-79 254
MS.gene20127.t1 AT3G13730 33.100 429 267 6 26 443 46 465 2.44e-79 256
MS.gene20127.t1 AT3G13730 33.019 424 264 6 30 442 50 464 4.95e-78 251
MS.gene20127.t1 AT4G15393 32.836 402 255 9 2 399 8 398 3.75e-77 247
MS.gene20127.t1 AT4G15396 33.085 402 256 8 2 399 8 400 1.21e-76 246
MS.gene20127.t1 AT5G45340 29.598 473 314 10 1 470 6 462 1.18e-74 243
MS.gene20127.t1 AT5G45340 30.088 452 298 9 1 450 6 441 2.42e-73 238
MS.gene20127.t1 AT4G15393 31.592 402 227 8 2 399 8 365 3.27e-71 231
MS.gene20127.t1 AT5G14400 31.066 441 267 10 36 467 1 413 5.23e-71 232
MS.gene20127.t1 AT5G14400 31.655 417 248 10 36 443 1 389 1.78e-68 224
MS.gene20127.t1 AT4G19230 28.894 443 300 7 31 472 36 464 3.94e-68 226
MS.gene20127.t1 AT3G30290 32.603 411 266 9 71 478 5 407 9.32e-68 223
MS.gene20127.t1 AT4G19230 30.024 413 275 6 31 443 36 434 2.12e-66 221
MS.gene20127.t1 AT5G38970 31.008 387 258 5 85 468 2 382 5.88e-65 215
MS.gene20127.t1 AT5G38970 31.008 387 258 5 85 468 2 382 5.88e-65 215
MS.gene20127.t1 AT5G05690 34.181 354 227 5 120 471 1 350 5.92e-65 214
MS.gene20127.t1 AT2G32440 28.571 455 307 9 1 442 9 458 2.27e-64 216
MS.gene20127.t1 AT2G32440 28.571 455 307 9 1 442 9 458 2.27e-64 216
MS.gene20127.t1 AT5G38970 29.953 424 280 8 3 421 5 416 2.33e-64 214
MS.gene20127.t1 AT2G29090 28.241 432 297 7 17 446 37 457 2.48e-64 216
MS.gene20127.t1 AT2G29090 28.241 432 297 7 17 446 37 457 2.48e-64 216
MS.gene20127.t1 AT3G44970 36.310 336 205 6 7 335 8 341 2.79e-63 210
MS.gene20127.t1 AT1G19630 28.635 447 310 6 3 446 9 449 2.12e-62 211
MS.gene20127.t1 AT1G19630 28.604 444 308 6 3 443 9 446 4.25e-61 206
MS.gene20127.t1 AT5G36110 28.910 422 289 7 31 446 34 450 5.13e-61 207
MS.gene20127.t1 AT1G05160 26.846 447 314 7 5 442 19 461 1.27e-58 201
MS.gene20127.t1 AT1G05160 26.846 447 314 7 5 442 19 461 1.27e-58 201
MS.gene20127.t1 AT2G42850 28.634 454 295 12 31 470 45 483 6.73e-56 194
MS.gene20127.t1 AT4G36380 31.858 339 225 3 31 364 69 406 5.26e-55 190
MS.gene20127.t1 AT5G14400 31.065 338 216 8 36 364 1 330 9.59e-52 178
MS.gene20127.t1 AT5G14400 29.016 386 237 10 91 467 2 359 5.72e-51 177
MS.gene20127.t1 AT1G19630 26.980 404 289 5 3 403 9 409 1.28e-49 176
MS.gene20127.t1 AT2G29090 26.575 365 261 5 84 446 3 362 2.55e-47 168
MS.gene20127.t1 AT5G36110 27.507 349 244 6 31 373 34 379 7.35e-41 151
MS.gene20127.t1 AT2G42850 26.966 356 235 9 31 373 45 388 2.36e-35 136
MS.gene20127.t1 AT2G29090 26.027 292 206 5 17 306 37 320 4.30e-31 123
MS.gene20127.t1 AT5G36140 26.056 284 199 6 31 308 33 311 3.21e-30 120
MS.gene20127.t1 AT4G13310 24.342 456 296 17 23 444 24 464 1.22e-22 101
MS.gene20127.t1 AT5G36130 33.333 138 88 2 332 467 1 136 5.18e-22 92.4
MS.gene20127.t1 AT5G06905 20.683 498 330 13 19 468 19 499 3.24e-21 97.1
MS.gene20127.t1 AT5G06900 24.421 475 304 20 3 442 12 466 1.18e-20 95.1
MS.gene20127.t1 AT4G37410 21.720 465 302 13 31 456 30 471 7.61e-20 92.8
MS.gene20127.t1 AT1G31800 20.824 437 297 11 67 469 139 560 9.15e-20 92.8
MS.gene20127.t1 AT4G13290 24.565 460 282 21 23 444 25 457 1.83e-19 91.7
MS.gene20127.t1 AT3G26310 26.482 253 165 6 222 457 233 481 3.69e-19 90.5
MS.gene20127.t1 AT4G37430 21.806 454 304 16 31 448 28 466 4.30e-19 90.5
MS.gene20127.t1 AT3G26300 20.482 498 319 16 1 451 4 471 5.59e-19 90.1
MS.gene20127.t1 AT2G45550 21.962 469 322 13 10 444 16 474 2.29e-18 88.2
MS.gene20127.t1 AT2G27000 21.628 430 288 15 60 451 64 482 2.60e-18 88.2
MS.gene20127.t1 AT5G04630 22.594 478 326 16 2 443 7 476 7.71e-18 86.7
MS.gene20127.t1 AT3G20110 23.415 410 285 12 66 451 70 474 1.10e-17 86.3
MS.gene20127.t1 AT4G12300 21.776 473 327 14 8 448 21 482 1.30e-17 85.9
MS.gene20127.t1 AT3G20140 21.681 452 310 14 31 451 42 480 2.07e-17 85.1
MS.gene20127.t1 AT5G44620 22.297 444 282 15 65 470 75 493 4.90e-17 84.0
MS.gene20127.t1 AT5G25140 21.413 453 304 12 31 448 29 464 5.07e-17 84.0
MS.gene20127.t1 AT5G57220 22.521 484 329 17 2 457 3 468 5.41e-17 84.0
MS.gene20127.t1 AT4G13770 22.222 477 327 19 1 444 1 466 7.08e-17 83.6
MS.gene20127.t1 AT5G24950 23.991 446 293 18 31 444 32 463 9.16e-17 83.2
MS.gene20127.t1 AT5G07990 22.314 484 327 17 1 449 4 473 1.00e-16 83.2
MS.gene20127.t1 AT5G25120 22.418 455 303 16 31 451 29 467 1.05e-16 83.2
MS.gene20127.t1 AT3G10560 22.128 470 327 16 4 443 20 480 1.41e-16 82.8
MS.gene20127.t1 AT5G25180 22.149 456 303 12 31 451 29 467 6.04e-16 80.5
MS.gene20127.t1 AT2G34500 22.811 434 279 15 75 473 78 490 6.13e-16 80.5
MS.gene20127.t1 AT3G20950 20.747 482 339 16 3 451 17 488 7.05e-16 80.5
MS.gene20127.t1 AT4G31500 22.271 458 301 16 30 448 28 469 1.39e-15 79.7
MS.gene20127.t1 AT1G66540 24.786 234 150 5 233 456 81 298 1.44e-15 78.2
MS.gene20127.t1 AT5G10610 23.465 456 312 16 26 455 27 471 2.25e-15 79.0
MS.gene20127.t1 AT4G37340 22.807 228 168 3 230 456 250 470 2.50e-15 78.6
MS.gene20127.t1 AT2G34490 21.495 428 290 17 75 470 79 492 2.73e-15 78.6
MS.gene20127.t1 AT4G15110 23.947 380 213 14 125 441 180 546 2.83e-15 79.0
MS.gene20127.t1 AT1G66540 24.786 234 150 5 233 456 140 357 3.44e-15 77.8
MS.gene20127.t1 AT4G37320 22.626 358 243 11 100 456 146 470 3.88e-15 78.2
MS.gene20127.t1 AT4G20240 25.505 396 259 13 30 400 32 416 6.04e-15 77.4
MS.gene20127.t1 AT3G48310 23.218 435 289 15 38 444 39 456 8.30e-15 77.0
MS.gene20127.t1 AT5G25130 26.500 200 136 4 259 451 272 467 9.40e-15 77.0
MS.gene20127.t1 AT3G28740 22.817 355 239 11 117 447 126 469 9.73e-15 77.0
MS.gene20127.t1 AT5G42590 23.494 498 323 19 4 465 9 484 1.15e-14 76.6
MS.gene20127.t1 AT1G50520 20.755 424 283 14 61 443 69 480 1.22e-14 76.6
MS.gene20127.t1 AT3G48280 22.022 445 301 16 29 444 28 455 1.49e-14 76.3
MS.gene20127.t1 AT3G20100 20.732 410 289 12 67 444 73 478 2.43e-14 75.9
MS.gene20127.t1 AT4G15380 21.163 430 270 12 61 444 68 474 3.85e-14 75.1
MS.gene20127.t1 AT4G15360 22.072 444 308 15 31 444 40 475 5.66e-14 74.7
MS.gene20127.t1 AT3G20940 20.309 453 320 14 31 451 42 485 6.94e-14 74.3
MS.gene20127.t1 AT3G53130 27.184 206 138 6 272 470 339 539 7.70e-14 74.3
MS.gene20127.t1 AT4G13310 24.011 379 242 15 23 370 24 387 8.13e-14 73.6
MS.gene20127.t1 AT4G15350 20.813 418 294 12 66 451 66 478 9.25e-14 73.9
MS.gene20127.t1 AT2G40890 21.298 493 330 16 3 457 8 480 1.20e-13 73.6
MS.gene20127.t1 AT5G24960 23.608 449 307 14 23 444 25 464 1.34e-13 73.2
MS.gene20127.t1 AT4G15330 20.675 474 333 16 9 451 17 478 1.40e-13 73.2
MS.gene20127.t1 AT5G10600 22.541 488 330 19 1 458 21 490 1.66e-13 73.2
MS.gene20127.t1 AT3G20130 20.913 416 294 13 60 444 67 478 1.77e-13 73.2
MS.gene20127.t1 AT2G45560 21.319 455 307 15 31 448 38 478 1.91e-13 72.8
MS.gene20127.t1 AT3G48270 22.197 437 301 17 33 444 33 455 1.96e-13 72.8
MS.gene20127.t1 AT3G26160 27.027 185 125 4 245 422 265 446 2.00e-13 72.8
MS.gene20127.t1 AT2G23180 26.442 208 142 5 272 470 307 512 5.56e-13 71.6
MS.gene20127.t1 AT5G04330 22.708 480 306 17 32 463 33 495 6.35e-13 71.2
MS.gene20127.t1 AT4G37330 20.058 344 234 9 106 446 152 457 6.81e-13 71.2
MS.gene20127.t1 AT1G33730 23.500 200 146 3 248 444 143 338 7.69e-13 70.5
MS.gene20127.t1 AT1G33730 23.500 200 146 3 248 444 143 338 7.69e-13 70.5
MS.gene20127.t1 AT2G27010 20.616 422 296 14 60 456 60 467 8.39e-13 70.9
MS.gene20127.t1 AT4G37400 21.378 421 297 14 65 457 60 474 9.48e-13 70.9
MS.gene20127.t1 AT3G48320 22.350 434 294 15 38 444 39 456 1.38e-12 70.1
MS.gene20127.t1 AT4G20240 25.405 370 241 12 30 375 32 390 1.58e-12 69.7
MS.gene20127.t1 AT5G36220 21.973 223 163 5 230 451 111 323 2.23e-12 68.9
MS.gene20127.t1 AT1G11680 21.239 452 319 13 8 437 15 451 2.27e-12 69.3
MS.gene20127.t1 AT1G13090 22.000 450 302 18 30 443 27 463 2.42e-12 69.3
MS.gene20127.t1 AT1G13110 19.835 484 343 13 3 451 4 477 2.73e-12 69.3
MS.gene20127.t1 AT5G24910 25.806 217 142 7 237 441 292 501 2.78e-12 69.3
MS.gene20127.t1 AT1G64900 21.212 462 313 15 38 459 38 488 3.07e-12 68.9
MS.gene20127.t1 AT2G25160 23.158 475 302 20 12 436 17 478 3.41e-12 68.9
MS.gene20127.t1 AT3G26330 25.098 255 168 8 222 458 234 483 3.46e-12 68.9
MS.gene20127.t1 AT1G28430 21.510 437 295 15 61 459 66 492 3.49e-12 68.9
MS.gene20127.t1 AT1G74550 21.412 425 283 13 67 457 58 465 5.01e-12 68.6
MS.gene20127.t1 AT5G38450 22.963 405 274 14 65 441 91 485 6.31e-12 68.2
MS.gene20127.t1 AT4G37360 24.390 246 174 5 220 462 242 478 6.82e-12 68.2
MS.gene20127.t1 AT2G45570 20.097 413 293 11 65 444 67 475 9.04e-12 67.8
MS.gene20127.t1 AT1G13100 27.451 204 128 6 246 433 261 460 1.10e-11 67.4
MS.gene20127.t1 AT1G24540 24.521 261 186 6 219 471 264 521 1.46e-11 67.0
MS.gene20127.t1 AT2G26710 22.943 401 264 15 67 441 103 484 1.67e-11 67.0
MS.gene20127.t1 AT4G22710 19.660 412 298 13 66 448 84 491 2.07e-11 66.6
MS.gene20127.t1 AT2G28860 18.632 424 303 14 75 470 79 488 3.15e-11 65.9
MS.gene20127.t1 AT3G20090 19.718 426 300 16 60 451 68 485 3.88e-11 65.9
MS.gene20127.t1 AT3G03470 21.489 470 323 15 30 459 30 493 3.89e-11 65.5
MS.gene20127.t1 AT4G31970 23.907 343 213 13 165 467 177 511 5.36e-11 65.1
MS.gene20127.t1 AT2G14100 19.855 413 298 12 61 444 69 477 5.41e-11 65.1
MS.gene20127.t1 AT3G25180 20.418 431 302 14 65 460 70 494 5.57e-11 65.1

Find 126 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGAGTCCTCCGAGAATTTA+AGG 0.150911 5.4:+5022805 MS.gene20127:CDS
GATACATTCACAGAGATATT+TGG 0.163237 5.4:+5022444 MS.gene20127:CDS
ATCAATGACATTTACATTTC+AGG 0.168011 5.4:+5023529 MS.gene20127:CDS
ACCAAACATTTCCTGGCTTT+TGG 0.233382 5.4:+5024182 MS.gene20127:CDS
ACTGAAGGCTCTCACCTAAA+AGG 0.242119 5.4:-5021998 None:intergenic
TTTGATCTTTCTCTGTGATC+TGG 0.305430 5.4:-5024470 None:intergenic
AACAATATTCCCTCCTTTGA+TGG 0.311079 5.4:-5024409 None:intergenic
AATATCTCTGTGAATGTATC+TGG 0.320683 5.4:-5022441 None:intergenic
AGTGCCTTCCGGAAGATTCC+TGG 0.327774 5.4:-5023677 None:intergenic
TTCATTCTCTTCTTGATGAA+TGG 0.341050 5.4:-5022053 None:intergenic
ATACATTCACAGAGATATTT+GGG 0.355848 5.4:+5022445 MS.gene20127:CDS
AAATCCTTCTGTTGTTTCCT+AGG 0.357079 5.4:-5023164 None:intergenic
TGGTGCTACCAAACATTTCC+TGG 0.362057 5.4:+5024175 MS.gene20127:CDS
AACATGATGCTCAATTTGTT+TGG 0.363635 5.4:+5022516 MS.gene20127:CDS
ACCAAGTTTGTCTTGAAGAT+TGG 0.370600 5.4:-5022333 None:intergenic
ATTTGCAAGTCTCGCAGTTT+CGG 0.376972 5.4:-5023648 None:intergenic
TTACACGTTGGGTTTATAGA+TGG 0.377880 5.4:+5021925 MS.gene20127:CDS
TGCTAAACGCACCTCCCATC+TGG 0.378101 5.4:-5023961 None:intergenic
TGCCATGTGACTCCAGAGTT+AGG 0.381381 5.4:-5023497 None:intergenic
AAAGTTCTCCCTTAAATTCT+CGG 0.385746 5.4:-5022814 None:intergenic
AGCTTATAACAAATGTTTGC+AGG 0.388693 5.4:+5022887 MS.gene20127:CDS
CATTTGTTATAAGCTGTTCC+TGG 0.389618 5.4:-5022879 None:intergenic
TTTGAACCCTGCGAAATATC+AGG 0.389672 5.4:+5023917 MS.gene20127:CDS
AATTGAGCATCATGTTCTTA+AGG 0.390570 5.4:-5022509 None:intergenic
CTGAAGGCTCTCACCTAAAA+GGG 0.394233 5.4:-5021997 None:intergenic
TCATTCCCTCTCAACATTCC+AGG 0.394399 5.4:+5022861 MS.gene20127:CDS
GGGAATATTGTTCGAACTCC+TGG 0.399698 5.4:+5024420 MS.gene20127:CDS
TAATTTCCCTTAGTGCCTTC+CGG 0.411050 5.4:-5023688 None:intergenic
CCTTAAATTCTCGGAGGACT+CGG 0.426734 5.4:-5022805 None:intergenic
CAAAATGTAGGTTCCTTACA+TGG 0.428064 5.4:+5022471 MS.gene20127:CDS
AGACTTGCAAATATAGTTCC+AGG 0.431096 5.4:+5023659 MS.gene20127:CDS
ATATAGTTCCAGGAATCTTC+CGG 0.432579 5.4:+5023669 MS.gene20127:CDS
ATTGTCAGAGAGTAATTTGA+TGG 0.434342 5.4:-5023312 None:intergenic
ATTGCTTGGTAACAAAGTAT+AGG 0.436931 5.4:+5024267 MS.gene20127:CDS
GTAATTTGATGGCATAAGTA+AGG 0.438483 5.4:-5023301 None:intergenic
ACCAAAAGCCAGGAAATGTT+TGG 0.440923 5.4:-5024183 None:intergenic
TAACTACTTCATATTCCAAC+AGG 0.445863 5.4:+5022392 MS.gene20127:CDS
TAGGATTCTCACGTCGTTCA+AGG 0.447412 5.4:-5023478 None:intergenic
CTTATACATAAAACCATGTA+AGG 0.447459 5.4:-5022484 None:intergenic
ATCTGGACATGAAAGCCATT+TGG 0.457418 5.4:-5024453 None:intergenic
TATGTGCATTATTACACGTT+GGG 0.458676 5.4:+5021914 MS.gene20127:CDS
GCAGGGTTCAAATGTACAGC+TGG 0.459923 5.4:-5023906 None:intergenic
GAATCTTCCGGAAGGCACTA+AGG 0.466533 5.4:+5023681 MS.gene20127:CDS
AAGCTTCGAAACCACTTCTC+AGG 0.466680 5.4:+5023277 MS.gene20127:CDS
AATATGAAGTAGTTAAGATC+AGG 0.468099 5.4:-5022384 None:intergenic
CCTGGTTTACAATTTCCAAA+TGG 0.471815 5.4:+5024438 MS.gene20127:CDS
CGAGTCCTCCGAGAATTTAA+GGG 0.477211 5.4:+5022806 MS.gene20127:CDS
AGAGCATGCTGCAGGAAAGA+AGG 0.484392 5.4:+5023135 MS.gene20127:CDS
AGGAATATCACAAGAAGTGT+TGG 0.485257 5.4:-5022030 None:intergenic
AGCCTGCAGAACATTACAAC+AGG 0.486587 5.4:+5022581 MS.gene20127:CDS
ACCAGCAGGATGGGCAATCA+TGG 0.490842 5.4:+5023875 MS.gene20127:CDS
GATTGCCCATCCTGCTGGTA+TGG 0.491364 5.4:-5023871 None:intergenic
CGCCTGTTGTAATGTTCTGC+AGG 0.492751 5.4:-5022583 None:intergenic
ATTACAACAGGCGTCGTGTC+AGG 0.493459 5.4:+5022593 MS.gene20127:CDS
AAACTACCACCAGGTACAAT+GGG 0.497164 5.4:+5021969 MS.gene20127:CDS
ACAATATTCCCTCCTTTGAT+GGG 0.500084 5.4:-5024408 None:intergenic
GGGTCTGTGGACACTACAAC+TGG 0.501330 5.4:-5022363 None:intergenic
AACTTTGTTGCATTTATACA+AGG 0.506305 5.4:+5022831 MS.gene20127:CDS
ACCATGATTGCCCATCCTGC+TGG 0.509227 5.4:-5023876 None:intergenic
TATTGAAGAACTTAGAAAAG+AGG 0.509615 5.4:+5023199 MS.gene20127:CDS
AGAGGATCCTGATATTTCGC+AGG 0.516865 5.4:-5023924 None:intergenic
CCATTTGGAAATTGTAAACC+AGG 0.516872 5.4:-5024438 None:intergenic
GGAATATCACAAGAAGTGTT+GGG 0.519625 5.4:-5022029 None:intergenic
TCATGCCTCCACCAAAAGCC+AGG 0.525654 5.4:-5024193 None:intergenic
ACCAATCTTCAAGACAAACT+TGG 0.526479 5.4:+5022332 MS.gene20127:CDS
ATTGAAGAACTTAGAAAAGA+GGG 0.526613 5.4:+5023200 MS.gene20127:CDS
AAACGCACCTCCCATCTGGA+TGG 0.527002 5.4:-5023957 None:intergenic
AGAATTTGCCAAGGTTCAGA+TGG 0.528615 5.4:+5024232 MS.gene20127:CDS
CAGGGTTCAAATGTACAGCT+GGG 0.535877 5.4:-5023905 None:intergenic
AAATTCTCGGAGGACTCGGT+TGG 0.542724 5.4:-5022801 None:intergenic
TGTAATTGCTTGAACACCAA+GGG 0.542826 5.4:-5023335 None:intergenic
GATGCTTAAGAGCATGCTGC+AGG 0.543371 5.4:+5023127 MS.gene20127:CDS
GGTAGTTTACCATTGCAACT+AGG 0.543466 5.4:-5021954 None:intergenic
CTTAACAGAAGCAATAGCTC+TGG 0.543914 5.4:+5023229 MS.gene20127:CDS
ATTCTCTTCTTGATGAATGG+AGG 0.545192 5.4:-5022050 None:intergenic
ATCTTCAAGACAAACTTGGT+TGG 0.546380 5.4:+5022336 MS.gene20127:CDS
ATGTATCTGGATACCAACTC+TGG 0.549088 5.4:-5022428 None:intergenic
ATATTTGGGCAACAAAATGT+AGG 0.549555 5.4:+5022459 MS.gene20127:CDS
AAGGGAAAATATTCCAGAGT+TGG 0.550551 5.4:+5022415 MS.gene20127:CDS
TTGTCTTCAACCCATCCAGA+TGG 0.551692 5.4:+5023946 MS.gene20127:CDS
ATATACCATACCAGCAGGAT+GGG 0.555489 5.4:+5023866 MS.gene20127:CDS
TAAACTACCACCAGGTACAA+TGG 0.556385 5.4:+5021968 MS.gene20127:CDS
TCAGGACAGTGTCGAGCTGA+AGG 0.557932 5.4:+5022611 MS.gene20127:CDS
GAGCATGCTGCAGGAAAGAA+GGG 0.558252 5.4:+5023136 MS.gene20127:CDS
ATTACTCTCTGACAATCCCT+TGG 0.558657 5.4:+5023319 MS.gene20127:CDS
ATTCTCACGTCGTTCAAGGA+TGG 0.565772 5.4:-5023474 None:intergenic
TTCAGGTGGCGACCCATCAA+AGG 0.566577 5.4:+5024396 MS.gene20127:intron
AATCTTCCGGAAGGCACTAA+GGG 0.567870 5.4:+5023682 MS.gene20127:CDS
TGGAGAAATCCTAGTTGCAA+TGG 0.573060 5.4:+5021945 MS.gene20127:CDS
TCATCAAGAAGAGAATGAAA+AGG 0.575267 5.4:+5022057 MS.gene20127:CDS
CGACGTGAGAATCCTAACTC+TGG 0.577850 5.4:+5023485 MS.gene20127:CDS
TGTCTTCAACCCATCCAGAT+GGG 0.579182 5.4:+5023947 MS.gene20127:CDS
GCTGAAGGAAGCAACAGAAA+CGG 0.582765 5.4:+5022626 MS.gene20127:CDS
CTGTTCCTGGAATGTTGAGA+GGG 0.583184 5.4:-5022866 None:intergenic
AGGGGTAATCCCATTGTACC+TGG 0.583857 5.4:-5021978 None:intergenic
AACGCACCTCCCATCTGGAT+GGG 0.588199 5.4:-5023956 None:intergenic
GATATACCATACCAGCAGGA+TGG 0.594840 5.4:+5023865 MS.gene20127:CDS
GTAGTTAAGATCAGGGTCTG+TGG 0.595135 5.4:-5022376 None:intergenic
TAATTTGATGGCATAAGTAA+GGG 0.595541 5.4:-5023300 None:intergenic
AAATGTTTGGTAGCACCACT+CGG 0.596149 5.4:-5024170 None:intergenic
AGGAAAGAAGGGAAATGCCT+AGG 0.597147 5.4:+5023147 MS.gene20127:CDS
ATAAGTAAGGGCCTGAGAAG+TGG 0.597216 5.4:-5023288 None:intergenic
CTGGATGGGTTGAAGACAAG+AGG 0.599247 5.4:-5023942 None:intergenic
GCAGGATATACCATACCAGC+AGG 0.600527 5.4:+5023861 MS.gene20127:intron
AGGTGGCGACCCATCAAAGG+AGG 0.605955 5.4:+5024399 MS.gene20127:intron
GAGGATCCTGATATTTCGCA+GGG 0.613931 5.4:-5023923 None:intergenic
TGTTGGGACAGAATTTGCCA+AGG 0.619174 5.4:+5024223 MS.gene20127:CDS
GCTGTTCCTGGAATGTTGAG+AGG 0.622568 5.4:-5022867 None:intergenic
TACTTCATATTCCAACAGGA+AGG 0.624124 5.4:+5022396 MS.gene20127:CDS
ACTTCATATTCCAACAGGAA+GGG 0.625650 5.4:+5022397 MS.gene20127:CDS
ATATGAAGTAGTTAAGATCA+GGG 0.631648 5.4:-5022383 None:intergenic
AGGGTTCAAATGTACAGCTG+GGG 0.636970 5.4:-5023904 None:intergenic
CTATGTGCATTATTACACGT+TGG 0.643076 5.4:+5021913 MS.gene20127:CDS
GGGTTCAAATGTACAGCTGG+GGG 0.646158 5.4:-5023903 None:intergenic
TTGTAATTGCTTGAACACCA+AGG 0.648842 5.4:-5023336 None:intergenic
TGCAATGGTAAACTACCACC+AGG 0.650281 5.4:+5021960 MS.gene20127:CDS
CAAAGAGAAGCACAAACATG+AGG 0.652872 5.4:-5023253 None:intergenic
TGAAGGCTCTCACCTAAAAG+GGG 0.655464 5.4:-5021996 None:intergenic
ATCCTAACTCTGGAGTCACA+TGG 0.660807 5.4:+5023495 MS.gene20127:CDS
AATGCCTAGGAAACAACAGA+AGG 0.670450 5.4:+5023160 MS.gene20127:CDS
GGTGGCGACCCATCAAAGGA+GGG 0.671094 5.4:+5024400 MS.gene20127:intron
AGTTCCAGGAATCTTCCGGA+AGG 0.672126 5.4:+5023673 MS.gene20127:CDS
CTTCAACCCATCCAGATGGG+AGG 0.674277 5.4:+5023950 MS.gene20127:CDS
GTTCTCCCTTAAATTCTCGG+AGG 0.689554 5.4:-5022811 None:intergenic
GGTAATCCCATTGTACCTGG+TGG 0.706713 5.4:-5021975 None:intergenic
CTACAGGGAATGGAACCGAG+TGG 0.755309 5.4:+5024155 MS.gene20127:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTACAAATATATTATTATA+TGG + chr5.4:5023363-5023382 MS.gene20127:intron 10.0%
!! AATTATAAAAATTAGTACAC+TGG + chr5.4:5022955-5022974 MS.gene20127:intron 15.0%
!!! AAATTTCTTCATTTTTAATG+TGG + chr5.4:5023561-5023580 MS.gene20127:intron 15.0%
!!! AATTTCTTCATTTTTAATGT+GGG + chr5.4:5023562-5023581 MS.gene20127:intron 15.0%
!!! TCTTTTGAACTATTTTTTTA+TGG + chr5.4:5023394-5023413 MS.gene20127:intron 15.0%
!! AAATAGTTCAAAAGATTCTA+AGG - chr5.4:5023389-5023408 None:intergenic 20.0%
!! ATCACAAAATTGTAAAAGAA+GGG - chr5.4:5024120-5024139 None:intergenic 20.0%
!! CAAAAACAAAAGGAATAATA+TGG + chr5.4:5022280-5022299 MS.gene20127:intron 20.0%
!! TCATCTGAATGATTATATAT+AGG - chr5.4:5022743-5022762 None:intergenic 20.0%
!! TGATTATATATAGGAAAGAA+AGG - chr5.4:5022734-5022753 None:intergenic 20.0%
!!! AACTATTTTTTTATGGCTTT+AGG + chr5.4:5023401-5023420 MS.gene20127:intron 20.0%
!!! ACTAAGGGAAATTAATTTTA+AGG + chr5.4:5023697-5023716 MS.gene20127:CDS 20.0%
!!! AGGTAAGCATTTTATTAATA+AGG + chr5.4:5022907-5022926 MS.gene20127:intron 20.0%
!!! CTAAGGGAAATTAATTTTAA+GGG + chr5.4:5023698-5023717 MS.gene20127:CDS 20.0%
!!! GGTAAGCATTTTATTAATAA+GGG + chr5.4:5022908-5022927 MS.gene20127:intron 20.0%
!!! TAATAATATCACAGTTTGTT+CGG + chr5.4:5022145-5022164 MS.gene20127:intron 20.0%
! AACTTTGTTGCATTTATACA+AGG + chr5.4:5022831-5022850 MS.gene20127:CDS 25.0%
! AATATGAAGTAGTTAAGATC+AGG - chr5.4:5022387-5022406 None:intergenic 25.0%
! ACTTGATGTTTAAGTAATAG+TGG + chr5.4:5023782-5023801 MS.gene20127:intron 25.0%
! ATAAAAATTAGTACACTGGT+TGG + chr5.4:5022959-5022978 MS.gene20127:intron 25.0%
! ATACATTCACAGAGATATTT+GGG + chr5.4:5022445-5022464 MS.gene20127:CDS 25.0%
! ATATGAAGTAGTTAAGATCA+GGG - chr5.4:5022386-5022405 None:intergenic 25.0%
! ATCAATGACATTTACATTTC+AGG + chr5.4:5023529-5023548 MS.gene20127:CDS 25.0%
! ATTGAAGAACTTAGAAAAGA+GGG + chr5.4:5023200-5023219 MS.gene20127:CDS 25.0%
! CTTATACATAAAACCATGTA+AGG - chr5.4:5022487-5022506 None:intergenic 25.0%
! CTTTAACGTTTGAATATTTC+AGG + chr5.4:5024379-5024398 MS.gene20127:intron 25.0%
! GATAACTTGAGTTCAAATTA+TGG + chr5.4:5022168-5022187 MS.gene20127:intron 25.0%
! GATCACAAAATTGTAAAAGA+AGG - chr5.4:5024121-5024140 None:intergenic 25.0%
! TATTGAAGAACTTAGAAAAG+AGG + chr5.4:5023199-5023218 MS.gene20127:CDS 25.0%
! TCATTATTGTAGACAAAATG+AGG - chr5.4:5023835-5023854 None:intergenic 25.0%
!! AATAATATCACAGTTTGTTC+GGG + chr5.4:5022146-5022165 MS.gene20127:intron 25.0%
!! TAATTTGATGGCATAAGTAA+GGG - chr5.4:5023303-5023322 None:intergenic 25.0%
!! TTTTGTGATCCAAAAAGAAA+TGG + chr5.4:5024131-5024150 MS.gene20127:intron 25.0%
!!! ACAGCAAAATTAACTTGTTT+TGG + chr5.4:5023076-5023095 MS.gene20127:intron 25.0%
!!! ATCATCTTTTTAAGACTTTC+AGG - chr5.4:5022543-5022562 None:intergenic 25.0%
AAAGGTTTAGACTTTAGACA+AGG - chr5.4:5022716-5022735 None:intergenic 30.0%
AAAGTTCTCCCTTAAATTCT+CGG - chr5.4:5022817-5022836 None:intergenic 30.0%
AATATCTCTGTGAATGTATC+TGG - chr5.4:5022444-5022463 None:intergenic 30.0%
AATTGAGCATCATGTTCTTA+AGG - chr5.4:5022512-5022531 None:intergenic 30.0%
ACGCATTCTGAATTAAATTC+AGG - chr5.4:5024354-5024373 None:intergenic 30.0%
AGCTTATAACAAATGTTTGC+AGG + chr5.4:5022887-5022906 MS.gene20127:CDS 30.0%
ATATTTGGGCAACAAAATGT+AGG + chr5.4:5022459-5022478 MS.gene20127:CDS 30.0%
ATTGTCAGAGAGTAATTTGA+TGG - chr5.4:5023315-5023334 None:intergenic 30.0%
GAAAAGATGGAAAGAAAATG+AGG - chr5.4:5023995-5024014 None:intergenic 30.0%
GAAGAAGGTTAAAATAGTAG+AGG - chr5.4:5022689-5022708 None:intergenic 30.0%
GATACATTCACAGAGATATT+TGG + chr5.4:5022444-5022463 MS.gene20127:CDS 30.0%
GTAATAAGCAATGTAATGCA+TGG + chr5.4:5024289-5024308 MS.gene20127:intron 30.0%
TAACGTTTGAATATTTCAGG+TGG + chr5.4:5024382-5024401 MS.gene20127:intron 30.0%
TAACTACTTCATATTCCAAC+AGG + chr5.4:5022392-5022411 MS.gene20127:CDS 30.0%
TATGTGCATTATTACACGTT+GGG + chr5.4:5021914-5021933 MS.gene20127:CDS 30.0%
TCATCAAGAAGAGAATGAAA+AGG + chr5.4:5022057-5022076 MS.gene20127:CDS 30.0%
TCTTAAAAAGATGATCTCAG+AGG + chr5.4:5022548-5022567 MS.gene20127:CDS 30.0%
TTAAATTCAGGCGTTAAAGA+AGG - chr5.4:5024342-5024361 None:intergenic 30.0%
TTCATTCTCTTCTTGATGAA+TGG - chr5.4:5022056-5022075 None:intergenic 30.0%
TTTAGACTTTAGACAAGGAA+TGG - chr5.4:5022711-5022730 None:intergenic 30.0%
! AACATGATGCTCAATTTGTT+TGG + chr5.4:5022516-5022535 MS.gene20127:CDS 30.0%
! ATTGCTTGGTAACAAAGTAT+AGG + chr5.4:5024267-5024286 MS.gene20127:CDS 30.0%
! GTAATTTGATGGCATAAGTA+AGG - chr5.4:5023304-5023323 None:intergenic 30.0%
! TTGTTGTCTCTTTTCAGATA+TGG + chr5.4:5022309-5022328 MS.gene20127:intron 30.0%
AACAATATTCCCTCCTTTGA+TGG - chr5.4:5024412-5024431 None:intergenic 35.0%
AAGGGAAAATATTCCAGAGT+TGG + chr5.4:5022415-5022434 MS.gene20127:CDS 35.0%
ACAATATTCCCTCCTTTGAT+GGG - chr5.4:5024411-5024430 None:intergenic 35.0%
ACCAAGTTTGTCTTGAAGAT+TGG - chr5.4:5022336-5022355 None:intergenic 35.0%
ACCAATCTTCAAGACAAACT+TGG + chr5.4:5022332-5022351 MS.gene20127:CDS 35.0%
ACTTCATATTCCAACAGGAA+GGG + chr5.4:5022397-5022416 MS.gene20127:CDS 35.0%
AGACTTGCAAATATAGTTCC+AGG + chr5.4:5023659-5023678 MS.gene20127:CDS 35.0%
ATATAGTTCCAGGAATCTTC+CGG + chr5.4:5023669-5023688 MS.gene20127:CDS 35.0%
ATCTTCAAGACAAACTTGGT+TGG + chr5.4:5022336-5022355 MS.gene20127:CDS 35.0%
ATTCTCTTCTTGATGAATGG+AGG - chr5.4:5022053-5022072 None:intergenic 35.0%
CAAAATGTAGGTTCCTTACA+TGG + chr5.4:5022471-5022490 MS.gene20127:CDS 35.0%
CATGTTCTTCCTAAAAGACA+AGG - chr5.4:5023451-5023470 None:intergenic 35.0%
CCAAAAAGAAATGGTCTACA+GGG + chr5.4:5024140-5024159 MS.gene20127:intron 35.0%
CCATTTGGAAATTGTAAACC+AGG - chr5.4:5024441-5024460 None:intergenic 35.0%
CCTGGTTTACAATTTCCAAA+TGG + chr5.4:5024438-5024457 MS.gene20127:CDS 35.0%
CTATGTGCATTATTACACGT+TGG + chr5.4:5021913-5021932 MS.gene20127:CDS 35.0%
GTTTCAATGTTCAAGTGCAT+TGG + chr5.4:5023757-5023776 MS.gene20127:intron 35.0%
TACTTCATATTCCAACAGGA+AGG + chr5.4:5022396-5022415 MS.gene20127:CDS 35.0%
TCCAAAAAGAAATGGTCTAC+AGG + chr5.4:5024139-5024158 MS.gene20127:intron 35.0%
TGGGCTAAGACAAAAACAAA+AGG + chr5.4:5022270-5022289 MS.gene20127:intron 35.0%
TGTAATTGCTTGAACACCAA+GGG - chr5.4:5023338-5023357 None:intergenic 35.0%
TGTTGGGAGAAAAAAACTGA+AGG - chr5.4:5022016-5022035 None:intergenic 35.0%
TTACACGTTGGGTTTATAGA+TGG + chr5.4:5021925-5021944 MS.gene20127:CDS 35.0%
TTGTAATTGCTTGAACACCA+AGG - chr5.4:5023339-5023358 None:intergenic 35.0%
TTTAGACAAGGAATGGAAGA+AGG - chr5.4:5022704-5022723 None:intergenic 35.0%
TTTGATCTTTCTCTGTGATC+TGG - chr5.4:5024473-5024492 None:intergenic 35.0%
! AGGAATATCACAAGAAGTGT+TGG - chr5.4:5022033-5022052 None:intergenic 35.0%
!! AAATCCTTCTGTTGTTTCCT+AGG - chr5.4:5023167-5023186 None:intergenic 35.0%
!! AGCAACTAGCTTTGAAAAGA+TGG - chr5.4:5024008-5024027 None:intergenic 35.0%
!! CATTTGTTATAAGCTGTTCC+TGG - chr5.4:5022882-5022901 None:intergenic 35.0%
!! GGAATATCACAAGAAGTGTT+GGG - chr5.4:5022032-5022051 None:intergenic 35.0%
!!! GATGTCAATTTTGACTTCCT+CGG + chr5.4:5023423-5023442 MS.gene20127:intron 35.0%
!!! TAACTTGTTTTGGCTTCTCA+GGG + chr5.4:5023086-5023105 MS.gene20127:intron 35.0%
!!! TTAACTTGTTTTGGCTTCTC+AGG + chr5.4:5023085-5023104 MS.gene20127:intron 35.0%
AAAAACTGCCATCTGAACCT+TGG - chr5.4:5024243-5024262 None:intergenic 40.0%
AAACTACCACCAGGTACAAT+GGG + chr5.4:5021969-5021988 MS.gene20127:CDS 40.0%
AAGAAATGGTCTACAGGGAA+TGG + chr5.4:5024145-5024164 MS.gene20127:intron 40.0%
AATGCCTAGGAAACAACAGA+AGG + chr5.4:5023160-5023179 MS.gene20127:CDS 40.0%
ACCAAAAGCCAGGAAATGTT+TGG - chr5.4:5024186-5024205 None:intergenic 40.0%
AGAATTTGCCAAGGTTCAGA+TGG + chr5.4:5024232-5024251 MS.gene20127:CDS 40.0%
ATATACCATACCAGCAGGAT+GGG + chr5.4:5023866-5023885 MS.gene20127:CDS 40.0%
ATCTGGACATGAAAGCCATT+TGG - chr5.4:5024456-5024475 None:intergenic 40.0%
ATGTATCTGGATACCAACTC+TGG - chr5.4:5022431-5022450 None:intergenic 40.0%
ATTACTCTCTGACAATCCCT+TGG + chr5.4:5023319-5023338 MS.gene20127:CDS 40.0%
ATTATGGCTGAAGCAATCCT+TGG + chr5.4:5022184-5022203 MS.gene20127:intron 40.0%
ATTTGCAAGTCTCGCAGTTT+CGG - chr5.4:5023651-5023670 None:intergenic 40.0%
CTACAATAATGAACACGTGC+AGG + chr5.4:5023843-5023862 MS.gene20127:intron 40.0%
CTTAACAGAAGCAATAGCTC+TGG + chr5.4:5023229-5023248 MS.gene20127:CDS 40.0%
GCCAGACTTTACTTACCTTT+CGG + chr5.4:5022206-5022225 MS.gene20127:intron 40.0%
GGTAGTTTACCATTGCAACT+AGG - chr5.4:5021957-5021976 None:intergenic 40.0%
TAAACTACCACCAGGTACAA+TGG + chr5.4:5021968-5021987 MS.gene20127:CDS 40.0%
TAATTTCCCTTAGTGCCTTC+CGG - chr5.4:5023691-5023710 None:intergenic 40.0%
TGGAGAAATCCTAGTTGCAA+TGG + chr5.4:5021945-5021964 MS.gene20127:CDS 40.0%
TTTGAACCCTGCGAAATATC+AGG + chr5.4:5023917-5023936 MS.gene20127:CDS 40.0%
! AAATGTTTGGTAGCACCACT+CGG - chr5.4:5024173-5024192 None:intergenic 40.0%
! ACAATGGGATTACCCCTTTT+AGG + chr5.4:5021984-5022003 MS.gene20127:CDS 40.0%
! CAAAGAGAAGCACAAACATG+AGG - chr5.4:5023256-5023275 None:intergenic 40.0%
! CCCTGTAGACCATTTCTTTT+TGG - chr5.4:5024143-5024162 None:intergenic 40.0%
! GAGGCATGAGATTTTGTGTT+GGG + chr5.4:5024207-5024226 MS.gene20127:CDS 40.0%
! GGAATATTTTCCCTTCCTGT+TGG - chr5.4:5022410-5022429 None:intergenic 40.0%
! GGCAGTTTTTCTTCATTGCT+TGG + chr5.4:5024253-5024272 MS.gene20127:CDS 40.0%
!! AAACATTTCCTGGCTTTTGG+TGG + chr5.4:5024185-5024204 MS.gene20127:CDS 40.0%
!! ACCAAACATTTCCTGGCTTT+TGG + chr5.4:5024182-5024201 MS.gene20127:CDS 40.0%
!!! GTTGGTTTTCTCAAGAAGTG+TGG + chr5.4:5022977-5022996 MS.gene20127:intron 40.0%
!!! TTGTTTTTGTCTTAGCCCAC+CGG - chr5.4:5022269-5022288 None:intergenic 40.0%
AAGCTTCGAAACCACTTCTC+AGG + chr5.4:5023277-5023296 MS.gene20127:CDS 45.0%
ACTGAAGGCTCTCACCTAAA+AGG - chr5.4:5022001-5022020 None:intergenic 45.0%
AGAGGATCCTGATATTTCGC+AGG - chr5.4:5023927-5023946 None:intergenic 45.0%
AGCCTGCAGAACATTACAAC+AGG + chr5.4:5022581-5022600 MS.gene20127:CDS 45.0%
AGGAAAGAAGGGAAATGCCT+AGG + chr5.4:5023147-5023166 MS.gene20127:CDS 45.0%
AGGGTTCAAATGTACAGCTG+GGG - chr5.4:5023907-5023926 None:intergenic 45.0%
AGGTAAGTAAAGTCTGGCCA+AGG - chr5.4:5022204-5022223 None:intergenic 45.0%
ATAAGTAAGGGCCTGAGAAG+TGG - chr5.4:5023291-5023310 None:intergenic 45.0%
ATTCTCACGTCGTTCAAGGA+TGG - chr5.4:5023477-5023496 None:intergenic 45.0%
CAGGGTTCAAATGTACAGCT+GGG - chr5.4:5023908-5023927 None:intergenic 45.0%
CCTTAAATTCTCGGAGGACT+CGG - chr5.4:5022808-5022827 None:intergenic 45.0%
CGAGTCCTCCGAGAATTTAA+GGG + chr5.4:5022806-5022825 MS.gene20127:CDS 45.0%
CTGAAGGCTCTCACCTAAAA+GGG - chr5.4:5022000-5022019 None:intergenic 45.0%
CTGTTCCTGGAATGTTGAGA+GGG - chr5.4:5022869-5022888 None:intergenic 45.0%
GAGGATCCTGATATTTCGCA+GGG - chr5.4:5023926-5023945 None:intergenic 45.0%
GATATACCATACCAGCAGGA+TGG + chr5.4:5023865-5023884 MS.gene20127:CDS 45.0%
GCCGAAAGGTAAGTAAAGTC+TGG - chr5.4:5022210-5022229 None:intergenic 45.0%
GCTGAAGGAAGCAACAGAAA+CGG + chr5.4:5022626-5022645 MS.gene20127:CDS 45.0%
GGGAATATTGTTCGAACTCC+TGG + chr5.4:5024420-5024439 MS.gene20127:CDS 45.0%
GTAGTTAAGATCAGGGTCTG+TGG - chr5.4:5022379-5022398 None:intergenic 45.0%
GTTCTCCCTTAAATTCTCGG+AGG - chr5.4:5022814-5022833 None:intergenic 45.0%
TAATCCAAAGTTCGGCCGAA+AGG - chr5.4:5022224-5022243 None:intergenic 45.0%
TAGGATTCTCACGTCGTTCA+AGG - chr5.4:5023481-5023500 None:intergenic 45.0%
TCATTCCCTCTCAACATTCC+AGG + chr5.4:5022861-5022880 MS.gene20127:CDS 45.0%
TGAAGGCTCTCACCTAAAAG+GGG - chr5.4:5021999-5022018 None:intergenic 45.0%
TGCAATGGTAAACTACCACC+AGG + chr5.4:5021960-5021979 MS.gene20127:CDS 45.0%
TGTCTTCAACCCATCCAGAT+GGG + chr5.4:5023947-5023966 MS.gene20127:CDS 45.0%
TGTTGGGACAGAATTTGCCA+AGG + chr5.4:5024223-5024242 MS.gene20127:CDS 45.0%
TTGTCTTCAACCCATCCAGA+TGG + chr5.4:5023946-5023965 MS.gene20127:CDS 45.0%
! TCCTCGGTACCTTGTCTTTT+AGG + chr5.4:5023439-5023458 MS.gene20127:intron 45.0%
!! AATCTTCCGGAAGGCACTAA+GGG + chr5.4:5023682-5023701 MS.gene20127:CDS 45.0%
!! ATCCTAACTCTGGAGTCACA+TGG + chr5.4:5023495-5023514 MS.gene20127:CDS 45.0%
!! GGAGGCATGAGATTTTGTGT+TGG + chr5.4:5024206-5024225 MS.gene20127:CDS 45.0%
!! GGTTTTGTGTCTAGGAGCAT+TGG + chr5.4:5021887-5021906 MS.gene20127:CDS 45.0%
!! TCCTAAAAGACAAGGTACCG+AGG - chr5.4:5023443-5023462 None:intergenic 45.0%
!! TGGTGCTACCAAACATTTCC+TGG + chr5.4:5024175-5024194 MS.gene20127:CDS 45.0%
AGAGCATGCTGCAGGAAAGA+AGG + chr5.4:5023135-5023154 MS.gene20127:CDS 50.0%
AGGGGTAATCCCATTGTACC+TGG - chr5.4:5021981-5022000 None:intergenic 50.0%
AGTTCCAGGAATCTTCCGGA+AGG + chr5.4:5023673-5023692 MS.gene20127:CDS 50.0%
CCGAGTCCTCCGAGAATTTA+AGG + chr5.4:5022805-5022824 MS.gene20127:CDS 50.0%
CGACGTGAGAATCCTAACTC+TGG + chr5.4:5023485-5023504 MS.gene20127:CDS 50.0%
CGCCTGTTGTAATGTTCTGC+AGG - chr5.4:5022586-5022605 None:intergenic 50.0%
CTTACCTTTCGGCCGAACTT+TGG + chr5.4:5022217-5022236 MS.gene20127:intron 50.0%
GAGCATGCTGCAGGAAAGAA+GGG + chr5.4:5023136-5023155 MS.gene20127:CDS 50.0%
GCAGGATATACCATACCAGC+AGG + chr5.4:5023861-5023880 MS.gene20127:intron 50.0%
GCAGGGTTCAAATGTACAGC+TGG - chr5.4:5023909-5023928 None:intergenic 50.0%
GCTGTTCCTGGAATGTTGAG+AGG - chr5.4:5022870-5022889 None:intergenic 50.0%
GGCCCTGGTAATCCAAAGTT+CGG - chr5.4:5022232-5022251 None:intergenic 50.0%
GGCCGAACTTTGGATTACCA+GGG + chr5.4:5022227-5022246 MS.gene20127:intron 50.0%
GGGTTCAAATGTACAGCTGG+GGG - chr5.4:5023906-5023925 None:intergenic 50.0%
GGTAATCCCATTGTACCTGG+TGG - chr5.4:5021978-5021997 None:intergenic 50.0%
TGCCATGTGACTCCAGAGTT+AGG - chr5.4:5023500-5023519 None:intergenic 50.0%
! AAATTCTCGGAGGACTCGGT+TGG - chr5.4:5022804-5022823 None:intergenic 50.0%
! ATTACAACAGGCGTCGTGTC+AGG + chr5.4:5022593-5022612 MS.gene20127:CDS 50.0%
! GATGCTTAAGAGCATGCTGC+AGG + chr5.4:5023127-5023146 MS.gene20127:CDS 50.0%
!! CATTTCCTGGCTTTTGGTGG+AGG + chr5.4:5024188-5024207 MS.gene20127:CDS 50.0%
!! CTGGATGGGTTGAAGACAAG+AGG - chr5.4:5023945-5023964 None:intergenic 50.0%
!! GAATCTTCCGGAAGGCACTA+AGG + chr5.4:5023681-5023700 MS.gene20127:CDS 50.0%
AAACGCACCTCCCATCTGGA+TGG - chr5.4:5023960-5023979 None:intergenic 55.0%
AACGCACCTCCCATCTGGAT+GGG - chr5.4:5023959-5023978 None:intergenic 55.0%
ACCAGCAGGATGGGCAATCA+TGG + chr5.4:5023875-5023894 MS.gene20127:CDS 55.0%
ACCATGATTGCCCATCCTGC+TGG - chr5.4:5023879-5023898 None:intergenic 55.0%
AGTGCCTTCCGGAAGATTCC+TGG - chr5.4:5023680-5023699 None:intergenic 55.0%
CGGCCGAACTTTGGATTACC+AGG + chr5.4:5022226-5022245 MS.gene20127:intron 55.0%
CTACAGGGAATGGAACCGAG+TGG + chr5.4:5024155-5024174 MS.gene20127:intron 55.0%
CTCATTCTCCTGGAACCGGT+GGG + chr5.4:5022251-5022270 MS.gene20127:intron 55.0%
CTTCAACCCATCCAGATGGG+AGG + chr5.4:5023950-5023969 MS.gene20127:CDS 55.0%
GATTGCCCATCCTGCTGGTA+TGG - chr5.4:5023874-5023893 None:intergenic 55.0%
GGGTCTGTGGACACTACAAC+TGG - chr5.4:5022366-5022385 None:intergenic 55.0%
TCATGCCTCCACCAAAAGCC+AGG - chr5.4:5024196-5024215 None:intergenic 55.0%
TGCTAAACGCACCTCCCATC+TGG - chr5.4:5023964-5023983 None:intergenic 55.0%
TTACCAGGGCCTCATTCTCC+TGG + chr5.4:5022241-5022260 MS.gene20127:intron 55.0%
TTCAGGTGGCGACCCATCAA+AGG + chr5.4:5024396-5024415 MS.gene20127:intron 55.0%
! TCAGGACAGTGTCGAGCTGA+AGG + chr5.4:5022611-5022630 MS.gene20127:CDS 55.0%
AGGTGGCGACCCATCAAAGG+AGG + chr5.4:5024399-5024418 MS.gene20127:intron 60.0%
CCTCATTCTCCTGGAACCGG+TGG + chr5.4:5022250-5022269 MS.gene20127:intron 60.0%
GGGCCTCATTCTCCTGGAAC+CGG + chr5.4:5022247-5022266 MS.gene20127:intron 60.0%
GGTGGCGACCCATCAAAGGA+GGG + chr5.4:5024400-5024419 MS.gene20127:intron 60.0%
GTTCCAGGAGAATGAGGCCC+TGG - chr5.4:5022247-5022266 None:intergenic 60.0%
!! CCACCGGTTCCAGGAGAATG+AGG - chr5.4:5022253-5022272 None:intergenic 60.0%
!! TGTCTTAGCCCACCGGTTCC+AGG - chr5.4:5022262-5022281 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 5021882 5024527 5021882 ID=MS.gene20127
chr5.4 mRNA 5021882 5024527 5021882 ID=MS.gene20127.t1;Parent=MS.gene20127
chr5.4 exon 5021882 5022078 5021882 ID=MS.gene20127.t1.exon1;Parent=MS.gene20127.t1
chr5.4 CDS 5021882 5022078 5021882 ID=cds.MS.gene20127.t1;Parent=MS.gene20127.t1
chr5.4 exon 5022326 5022647 5022326 ID=MS.gene20127.t1.exon2;Parent=MS.gene20127.t1
chr5.4 CDS 5022326 5022647 5022326 ID=cds.MS.gene20127.t1;Parent=MS.gene20127.t1
chr5.4 exon 5022759 5022908 5022759 ID=MS.gene20127.t1.exon3;Parent=MS.gene20127.t1
chr5.4 CDS 5022759 5022908 5022759 ID=cds.MS.gene20127.t1;Parent=MS.gene20127.t1
chr5.4 exon 5023107 5023358 5023107 ID=MS.gene20127.t1.exon4;Parent=MS.gene20127.t1
chr5.4 CDS 5023107 5023358 5023107 ID=cds.MS.gene20127.t1;Parent=MS.gene20127.t1
chr5.4 exon 5023461 5023550 5023461 ID=MS.gene20127.t1.exon5;Parent=MS.gene20127.t1
chr5.4 CDS 5023461 5023550 5023461 ID=cds.MS.gene20127.t1;Parent=MS.gene20127.t1
chr5.4 exon 5023641 5023719 5023641 ID=MS.gene20127.t1.exon6;Parent=MS.gene20127.t1
chr5.4 CDS 5023641 5023719 5023641 ID=cds.MS.gene20127.t1;Parent=MS.gene20127.t1
chr5.4 exon 5023865 5023971 5023865 ID=MS.gene20127.t1.exon7;Parent=MS.gene20127.t1
chr5.4 CDS 5023865 5023971 5023865 ID=cds.MS.gene20127.t1;Parent=MS.gene20127.t1
chr5.4 exon 5024161 5024288 5024161 ID=MS.gene20127.t1.exon8;Parent=MS.gene20127.t1
chr5.4 CDS 5024161 5024288 5024161 ID=cds.MS.gene20127.t1;Parent=MS.gene20127.t1
chr5.4 exon 5024401 5024527 5024401 ID=MS.gene20127.t1.exon9;Parent=MS.gene20127.t1
chr5.4 CDS 5024401 5024527 5024401 ID=cds.MS.gene20127.t1;Parent=MS.gene20127.t1
Gene Sequence

>MS.gene20127

ATGTGGGTTTTGTGTCTAGGAGCATTGGTTACTATGTGCATTATTACACGTTGGGTTTATAGATGGAGAAATCCTAGTTGCAATGGTAAACTACCACCAGGTACAATGGGATTACCCCTTTTAGGTGAGAGCCTTCAGTTTTTTTCTCCCAACACTTCTTGTGATATTCCTCCATTCATCAAGAAGAGAATGAAAAGGTATATATAAAAGTATATTACAAGTTATCAATTCAATTAAGCTTTCATTTTTTGTTAGAGAGTAATTAATAATATCACAGTTTGTTCGGGATAACTTGAGTTCAAATTATGGCTGAAGCAATCCTTGGCCAGACTTTACTTACCTTTCGGCCGAACTTTGGATTACCAGGGCCTCATTCTCCTGGAACCGGTGGGCTAAGACAAAAACAAAAGGAATAATATGGTTTTTTTTGTTGTCTCTTTTCAGATATGGACCAATCTTCAAGACAAACTTGGTTGGAAGACCAGTTGTAGTGTCCACAGACCCTGATCTTAACTACTTCATATTCCAACAGGAAGGGAAAATATTCCAGAGTTGGTATCCAGATACATTCACAGAGATATTTGGGCAACAAAATGTAGGTTCCTTACATGGTTTTATGTATAAGTACCTTAAGAACATGATGCTCAATTTGTTTGGTCCTGAAAGTCTTAAAAAGATGATCTCAGAGGTTGAACAAGCAGCCTGCAGAACATTACAACAGGCGTCGTGTCAGGACAGTGTCGAGCTGAAGGAAGCAACAGAAACGGTAAAATAATTACACTTTACACTAACTATTCTTTCATTCCTCTACTATTTTAACCTTCTTCCATTCCTTGTCTAAAGTCTAAACCTTTCTTTCCTATATATAATCATTCAGATGATATTTGATTTGACTGCAAAAAAACTCATCAGTTATGATCCAACCGAGTCCTCCGAGAATTTAAGGGAGAACTTTGTTGCATTTATACAAGGACTCATCTCATTCCCTCTCAACATTCCAGGAACAGCTTATAACAAATGTTTGCAGGTAAGCATTTTATTAATAAGGGTAATTTAGTAAACGAAACTCGTTTAATTATAAAAATTAGTACACTGGTTGGTTTTCTCAAGAAGTGTGGATAACTTTAAACGACACTTAATTTGAGACAGAGAAAGTATCAGACAAAGTGTAGTATTTTTATTTTGATTGAGAAAACAGCAAAATTAACTTGTTTTGGCTTCTCAGGGTAGAAAAAAAGCAATGAAGATGCTTAAGAGCATGCTGCAGGAAAGAAGGGAAATGCCTAGGAAACAACAGAAGGATTTCTTTGACTATGTTATTGAAGAACTTAGAAAAGAGGGAACACTCTTAACAGAAGCAATAGCTCTGGACCTCATGTTTGTGCTTCTCTTTGCAAGCTTCGAAACCACTTCTCAGGCCCTTACTTATGCCATCAAATTACTCTCTGACAATCCCTTGGTGTTCAAGCAATTACAAGTACGTTACAAATATATTATTATATGGCCTTAGAATCTTTTGAACTATTTTTTTATGGCTTTAGGATGTCAATTTTGACTTCCTCGGTACCTTGTCTTTTAGGAAGAACATGAAGCCATCCTTGAACGACGTGAGAATCCTAACTCTGGAGTCACATGGCAAGAATATAAATCAATGACATTTACATTTCAGGTTAGTTAAAAAATTTCTTCATTTTTAATGTGGGACATATTGTGTGTTAATTTATCTTATTTGAAATTCAATGAATGATGATTTGCACAGCTCATAACCGAAACTGCGAGACTTGCAAATATAGTTCCAGGAATCTTCCGGAAGGCACTAAGGGAAATTAATTTTAAGGGTATGTGATTGCTAATTTAATAATACAACATTTTCAAGTTTCAATGTTCAAGTGCATTGGTAACTTGATGTTTAAGTAATAGTGGAAAAGCACACTATATTTGACAATGTTACCTCATTTTGTCTACAATAATGAACACGTGCAGGATATACCATACCAGCAGGATGGGCAATCATGGTGTGTCCCCCAGCTGTACATTTGAACCCTGCGAAATATCAGGATCCTCTTGTCTTCAACCCATCCAGATGGGAGGTGCGTTTAGCATTTTTTTTCCTCATTTTCTTTCCATCTTTTCAAAGCTAGTTGCTTCAAAGAATCTCAAAAAGTAATGCAATTAGCTTCTTTAGCAAGTACTATAGATAATCATTCAAGTAACTTAGATTCTAGTCTATCATGTCCCTTCTTTTACAATTTTGTGATCCAAAAAGAAATGGTCTACAGGGAATGGAACCGAGTGGTGCTACCAAACATTTCCTGGCTTTTGGTGGAGGCATGAGATTTTGTGTTGGGACAGAATTTGCCAAGGTTCAGATGGCAGTTTTTCTTCATTGCTTGGTAACAAAGTATAGGTAATAAGCAATGTAATGCATGGAAAGTGACTTTAAACTGAAACAATGTACCTTCTTTAACGCCTGAATTTAATTCAGAATGCGTAGTCTCTTTAACGTTTGAATATTTCAGGTGGCGACCCATCAAAGGAGGGAATATTGTTCGAACTCCTGGTTTACAATTTCCAAATGGCTTTCATGTCCAGATCACAGAGAAAGATCAAAAGAAGCACGAATCAGAATGTACAACTACATATTAG
Protein sequence

>MS.gene20127.t1

MWVLCLGALVTMCIITRWVYRWRNPSCNGKLPPGTMGLPLLGESLQFFSPNTSCDIPPFIKKRMKRYGPIFKTNLVGRPVVVSTDPDLNYFIFQQEGKIFQSWYPDTFTEIFGQQNVGSLHGFMYKYLKNMMLNLFGPESLKKMISEVEQAACRTLQQASCQDSVELKEATETMIFDLTAKKLISYDPTESSENLRENFVAFIQGLISFPLNIPGTAYNKCLQGRKKAMKMLKSMLQERREMPRKQQKDFFDYVIEELRKEGTLLTEAIALDLMFVLLFASFETTSQALTYAIKLLSDNPLVFKQLQEEHEAILERRENPNSGVTWQEYKSMTFTFQLITETARLANIVPGIFRKALREINFKGYTIPAGWAIMVCPPAVHLNPAKYQDPLVFNPSRWEGMEPSGATKHFLAFGGGMRFCVGTEFAKVQMAVFLHCLVTKYRWRPIKGGNIVRTPGLQFPNGFHVQITEKDQKKHESECTTTY