AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20181


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20181.t1 MTR_8g101330 98.158 543 9 1 1 543 1 542 0.0 1102
MS.gene20181.t1 MTR_1g071610 47.228 451 237 1 73 522 44 494 1.27e-136 414
MS.gene20181.t1 MTR_3g073860 29.074 540 308 9 40 513 10 540 1.42e-63 226
MS.gene20181.t1 MTR_3g073820 29.264 516 295 8 64 513 7 518 3.08e-63 225
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20181.t1 AT5G35360 82.746 539 81 6 1 534 1 532 0.0 891
MS.gene20181.t1 AT5G35360 82.103 542 87 5 1 537 1 537 0.0 889
MS.gene20181.t1 AT5G35360 82.565 499 76 6 1 494 1 493 0.0 822
MS.gene20181.t1 AT1G03090 47.661 449 233 2 74 520 38 486 2.42e-142 428
MS.gene20181.t1 AT1G03090 46.102 449 220 3 74 520 38 466 1.47e-132 402
MS.gene20181.t1 AT1G36160 29.903 515 291 8 65 513 28 538 2.11e-64 228
MS.gene20181.t1 AT1G36160 29.903 515 291 8 65 513 28 538 2.11e-64 228
MS.gene20181.t1 AT1G36180 29.515 515 293 8 65 513 130 640 5.70e-63 224
MS.gene20181.t1 AT1G36180 30.375 293 162 5 65 325 130 412 2.64e-34 135
MS.gene20181.t1 AT1G36180 30.576 278 157 4 65 310 130 403 3.29e-34 134

Find 139 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAAATGATGGGGTTTATT+TGG 0.183921 4.4:+4121262 MS.gene20181:CDS
AGATGCTCTTCATGTTAAAT+TGG 0.211657 4.4:+4118723 MS.gene20181:CDS
CCTTTCAGCCTGACAGTATT+CGG 0.227213 4.4:+4119678 MS.gene20181:intron
CCTCGGAAACTTCACCTTAT+TGG 0.229123 4.4:-4118527 None:intergenic
AATAATTTCACAAACTCTTT+AGG 0.243552 4.4:-4120731 None:intergenic
CCAAGCTATGACTCTCTTCT+TGG 0.274076 4.4:+4124044 MS.gene20181:CDS
TTGTCGTCTTGACAAGATTT+TGG 0.277187 4.4:+4118609 MS.gene20181:CDS
GCCTGACAGTATTCGGGTTA+TGG 0.282616 4.4:+4119685 MS.gene20181:intron
AGAGTTTGTGAAATTATTAC+AGG 0.287061 4.4:+4120736 MS.gene20181:CDS
TTTAGTGATTCCAAATGTTC+TGG 0.308665 4.4:+4119043 MS.gene20181:CDS
TGCAAAAGCCCCTCACTTCC+TGG 0.315102 4.4:-4119761 None:intergenic
CAACATAATCGGGATAAATA+TGG 0.320897 4.4:-4124016 None:intergenic
ATTCGTACTGCTCATGAATT+GGG 0.322990 4.4:+4118664 MS.gene20181:CDS
CCCATTGCCTTCCGTAACTC+TGG 0.330454 4.4:-4122682 None:intergenic
ACCATGTTGCATCCTGGATA+TGG 0.332310 4.4:+4119089 MS.gene20181:CDS
TATTCGTACTGCTCATGAAT+TGG 0.336316 4.4:+4118663 MS.gene20181:CDS
CAGGTTCTTGCAGATAAATA+TGG 0.341311 4.4:+4122015 MS.gene20181:intron
GCAAATGTTCCTACTGTTCC+AGG 0.347800 4.4:+4119743 MS.gene20181:CDS
CCCAAGGCACATTGAATTCC+AGG 0.349569 4.4:+4121301 MS.gene20181:CDS
AGTGAGGCAGCTGCTGCATT+TGG 0.364842 4.4:+4121242 MS.gene20181:CDS
AAACTTCACCTTATTGGTTC+CGG 0.366780 4.4:-4118521 None:intergenic
TTTCTTGACCGGAACCAATA+AGG 0.368131 4.4:+4118513 MS.gene20181:CDS
GCCAACTCCTCCTCGTGCTT+TGG 0.372785 4.4:-4125812 None:intergenic
CCTGACAGTATTCGGGTTAT+GGG 0.377073 4.4:+4119686 MS.gene20181:CDS
CGCGCTTGGCGTTGTTTACA+AGG 0.383813 4.4:-4118562 None:intergenic
CTTTCAGCCTGACAGTATTC+GGG 0.385264 4.4:+4119679 MS.gene20181:intron
GTAGCAGCAGCCAGAACATT+TGG 0.387270 4.4:-4119053 None:intergenic
CCTGGAATTCAATGTGCCTT+GGG 0.390988 4.4:-4121301 None:intergenic
TTATGATAATCAATTGTTGT+AGG 0.405072 4.4:-4125621 None:intergenic
TATGGTAATGTTGTTCACTT+TGG 0.406381 4.4:+4122033 MS.gene20181:CDS
TGCATTGATACGGCATTCAA+TGG 0.407657 4.4:-4123605 None:intergenic
GCTTGGAGGAACAACATAAT+CGG 0.421150 4.4:-4124027 None:intergenic
ACCTGGAATTCAATGTGCCT+TGG 0.421295 4.4:-4121302 None:intergenic
CTAATACCATCTTCTGTTGT+GGG 0.421823 4.4:-4126250 None:intergenic
TGGAACGGTTGAGTTCCTTT+TGG 0.434021 4.4:+4122750 MS.gene20181:CDS
TAGTACGTACGATTGGCTAC+TGG 0.437946 4.4:-4118776 None:intergenic
AATGGGAGATGCAGCAGTTC+AGG 0.442712 4.4:+4122699 MS.gene20181:CDS
ATCAGACTGGCACACGAGAT+TGG 0.444872 4.4:+4119913 MS.gene20181:CDS
CCATTGCCTTCCGTAACTCT+GGG 0.448306 4.4:-4122681 None:intergenic
AAGCAATTGAACGCATGAAA+AGG 0.450014 4.4:+4125184 MS.gene20181:CDS
GCTGATGAATCTGTTTGTAT+TGG 0.453546 4.4:+4118745 MS.gene20181:CDS
TTATTTGCGGCGAGAGGAGG+AGG 0.455580 4.4:+4118457 MS.gene20181:CDS
GCTGCTGCATTTGGAAATGA+TGG 0.461431 4.4:+4121251 MS.gene20181:CDS
TCTCAGGCAACCGCAGGTGG+TGG 0.464445 4.4:+4120680 MS.gene20181:intron
CGTCTGGTGGTCCATTTGTC+AGG 0.469633 4.4:+4123985 MS.gene20181:CDS
GTTGAAATGTGTAGAGATCA+TGG 0.470064 4.4:+4119137 MS.gene20181:CDS
ACCGCAGGTGGTGGAGGACG+TGG 0.475210 4.4:+4120689 MS.gene20181:CDS
CAGGCAACCGCAGGTGGTGG+AGG 0.475314 4.4:+4120683 MS.gene20181:intron
TTTCACTGCACTTTCTTGAC+CGG 0.475964 4.4:+4118502 MS.gene20181:CDS
TGGCTATCCATCCTGACAAA+TGG 0.476844 4.4:-4123996 None:intergenic
AGAGCAAATTCGTGTAGCTA+TGG 0.477901 4.4:+4123470 MS.gene20181:CDS
CCAAGAAGAGAGTCATAGCT+TGG 0.478585 4.4:-4124044 None:intergenic
CAATCTACCTTGATCATCAC+AGG 0.481934 4.4:-4119940 None:intergenic
TTGATCCAAGGGTTTATTTG+CGG 0.485761 4.4:+4118444 MS.gene20181:intron
CGTAACTCTGGGGTCAATGC+AGG 0.488566 4.4:-4122670 None:intergenic
TCCAAAGCACGAGGAGGAGT+TGG 0.489276 4.4:+4125811 MS.gene20181:CDS
ACTAATACCATCTTCTGTTG+TGG 0.490006 4.4:-4126251 None:intergenic
CTGCATTGACCCCAGAGTTA+CGG 0.493052 4.4:+4122671 MS.gene20181:CDS
AGAAAAGCTTCGATACAAAC+AGG 0.494948 4.4:+4123494 MS.gene20181:CDS
AACAGCAATCTCGCCTCGAT+TGG 0.496053 4.4:-4118635 None:intergenic
CTTGGAGGAACAACATAATC+GGG 0.496995 4.4:-4124026 None:intergenic
AATAACCCCTTTCATCCAAA+AGG 0.500978 4.4:-4122765 None:intergenic
GAGCACCGCAATGACGCGCT+TGG 0.511028 4.4:-4118576 None:intergenic
AGCAATTGAACGCATGAAAA+GGG 0.514464 4.4:+4125185 MS.gene20181:CDS
AGTACGTACGATTGGCTACT+GGG 0.516459 4.4:-4118775 None:intergenic
CAATGTACCATGTTGCATCC+TGG 0.517977 4.4:+4119083 MS.gene20181:CDS
TGGTTTCCCTGTGATGATCA+AGG 0.520165 4.4:+4119933 MS.gene20181:CDS
ATGAAGAGCATCTTTATCAA+TGG 0.520742 4.4:-4118713 None:intergenic
GGAGATGAACACTCGTATCC+AGG 0.523521 4.4:+4122798 MS.gene20181:CDS
AAGCATCTTCTGCATTGATA+CGG 0.524332 4.4:-4123615 None:intergenic
CCCAGAGTTACGGAAGGCAA+TGG 0.524639 4.4:+4122681 MS.gene20181:CDS
CCTACTGTTCCAGGAAGTGA+GGG 0.528598 4.4:+4119752 MS.gene20181:CDS
TAAACTTATCCTTGACATAG+AGG 0.530123 4.4:+4125641 MS.gene20181:CDS
TTTGCGGCGAGAGGAGGAGG+AGG 0.533876 4.4:+4118460 MS.gene20181:CDS
CCAGAGTTACGGAAGGCAAT+GGG 0.540160 4.4:+4122682 MS.gene20181:CDS
AGAACGTGATTGCAGTATCC+AGG 0.541683 4.4:+4122056 MS.gene20181:CDS
TCAGCAAGAAAACCATATCC+AGG 0.543893 4.4:-4119101 None:intergenic
GTTCAGGCTGCCGCATCTAT+CGG 0.544965 4.4:+4122715 MS.gene20181:CDS
CCCATAACCCGAATACTGTC+AGG 0.546169 4.4:-4119686 None:intergenic
CATCAGGCAGTCGAGCCAGC+TGG 0.552188 4.4:-4126293 None:intergenic
CAACATGGTACATTGGCGGC+TGG 0.554436 4.4:-4119075 None:intergenic
ATTACAGCATACTTGCCGTC+TGG 0.554457 4.4:+4123969 MS.gene20181:CDS
CAGCTGGCTCGACTGCCTGA+TGG 0.557837 4.4:+4126294 MS.gene20181:CDS
CTCGATGACACTATTATCAC+AGG 0.559575 4.4:+4125210 MS.gene20181:CDS
AAGAGCATCTTTATCAATGG+TGG 0.559896 4.4:-4118710 None:intergenic
TGGTGGTCCATTTGTCAGGA+TGG 0.560888 4.4:+4123989 MS.gene20181:CDS
GGTTTATTTGCGGCGAGAGG+AGG 0.562352 4.4:+4118454 MS.gene20181:CDS
CTGCTGCATTTGGAAATGAT+GGG 0.562803 4.4:+4121252 MS.gene20181:CDS
CTATGACTCTCTTCTTGGAA+AGG 0.563838 4.4:+4124049 MS.gene20181:CDS
GGTGTTTCTCAGGCAACCGC+AGG 0.563893 4.4:+4120674 MS.gene20181:intron
CAAGGTTGAGTAGTTTGCCT+CGG 0.565038 4.4:-4118544 None:intergenic
CAACGCCAAGCGCGTCATTG+CGG 0.565275 4.4:+4118571 MS.gene20181:CDS
AAGGGATTTAGACCAGGGCC+AGG 0.565890 4.4:+4123640 MS.gene20181:CDS
TACATCAAGATACCTGGCCC+TGG 0.571298 4.4:-4123652 None:intergenic
TGAGGAAATCATTTCTGTCA+CGG 0.571947 4.4:-4123433 None:intergenic
GAGCAAATTCGTGTAGCTAT+GGG 0.578066 4.4:+4123471 MS.gene20181:CDS
TGAGTTACTGTGACGGTGGA+TGG 0.580607 4.4:-4118331 None:intergenic
GCCACGTCCTCCACCACCTG+CGG 0.582518 4.4:-4120690 None:intergenic
GAGGAAATCATTTCTGTCAC+GGG 0.583791 4.4:-4123432 None:intergenic
TCCTACTGTTCCAGGAAGTG+AGG 0.587626 4.4:+4119751 MS.gene20181:CDS
GTTTCTCAGGCAACCGCAGG+TGG 0.587826 4.4:+4120677 MS.gene20181:intron
TCTATCGGTTACATAGGTGT+TGG 0.588939 4.4:+4122730 MS.gene20181:CDS
GCACGAGGAGGAGTTGGCTG+TGG 0.593342 4.4:+4125817 MS.gene20181:CDS
CCCTCACTTCCTGGAACAGT+AGG 0.596080 4.4:-4119752 None:intergenic
CGGTTACATAGGTGTTGGAA+CGG 0.600084 4.4:+4122735 MS.gene20181:CDS
GATGCAACATGGTACATTGG+CGG 0.600535 4.4:-4119079 None:intergenic
AAGGGTTTATTTGCGGCGAG+AGG 0.602268 4.4:+4118451 MS.gene20181:intron
TCTGGGGTCAATGCAGGAGA+CGG 0.603122 4.4:-4122664 None:intergenic
TACTGTGACGGTGGATGGTG+AGG 0.604032 4.4:-4118326 None:intergenic
TGCTGCATTTGGAAATGATG+GGG 0.605718 4.4:+4121253 MS.gene20181:CDS
TAATACCATCTTCTGTTGTG+GGG 0.607382 4.4:-4126249 None:intergenic
CAGGATGCAACATGGTACAT+TGG 0.607863 4.4:-4119082 None:intergenic
CTCTTCTATCAAATCAACTG+AGG 0.608733 4.4:-4123451 None:intergenic
ACAGCATACTTGCCGTCTGG+TGG 0.610187 4.4:+4123972 MS.gene20181:CDS
CACTGAAGAAGCTATCAGAC+TGG 0.611224 4.4:+4119900 MS.gene20181:CDS
TTCGTACTGCTCATGAATTG+GGG 0.614649 4.4:+4118665 MS.gene20181:CDS
CTACTGTTCCAGGAAGTGAG+GGG 0.616506 4.4:+4119753 MS.gene20181:CDS
GAAGATGGTATTAGTTAACA+AGG 0.625049 4.4:+4126259 MS.gene20181:CDS
AATACCATCTTCTGTTGTGG+GGG 0.628217 4.4:-4126248 None:intergenic
CCAATAAGGTGAAGTTTCCG+AGG 0.628461 4.4:+4118527 MS.gene20181:CDS
TTTACAGCAAGCTAAGAGTG+AGG 0.634435 4.4:+4121226 MS.gene20181:intron
CAGTCTGATAGCTTCTTCAG+TGG 0.642003 4.4:-4119899 None:intergenic
ATGCACCTACCTCTATGTCA+AGG 0.645661 4.4:-4125650 None:intergenic
AGAAGTACATTCAAAACCCA+AGG 0.649047 4.4:+4121285 MS.gene20181:CDS
GTGGAATAAACAGCAACACA+AGG 0.656668 4.4:-4118691 None:intergenic
GCCGCATCTATCGGTTACAT+AGG 0.663768 4.4:+4122724 MS.gene20181:CDS
ACCATATCCAGGATGCAACA+TGG 0.666348 4.4:-4119090 None:intergenic
AGAAGAGAGTCATAGCTTGG+AGG 0.667067 4.4:-4124041 None:intergenic
GATGGTATTAGTTAACAAGG+TGG 0.672767 4.4:+4126262 MS.gene20181:CDS
CATTGCCTTCCGTAACTCTG+GGG 0.678385 4.4:-4122680 None:intergenic
CTGACAAATGGACCACCAGA+CGG 0.681736 4.4:-4123984 None:intergenic
ATTGTGAGTTACTGTGACGG+TGG 0.682182 4.4:-4118335 None:intergenic
CAGGAGGATATTGTACTCAG+AGG 0.691793 4.4:+4123577 MS.gene20181:intron
GGTGAGAGATTTGCATGCTG+CGG 0.698451 4.4:-4118305 None:intergenic
ACCTATGTAACCGATAGATG+CGG 0.699426 4.4:-4122725 None:intergenic
ATTGACCCCAGAGTTACGGA+AGG 0.703128 4.4:+4122675 MS.gene20181:CDS
AAGGTGGTGACAGAACCAGC+TGG 0.708140 4.4:+4126278 MS.gene20181:CDS
AATCTACCTTGATCATCACA+GGG 0.714324 4.4:-4119939 None:intergenic
GTAATTGTGAGTTACTGTGA+CGG 0.775391 4.4:-4118338 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.4 gene 4118289 4126313 4118289 ID=MS.gene20181
chr4.4 mRNA 4118289 4126313 4118289 ID=MS.gene20181.t1;Parent=MS.gene20181
chr4.4 exon 4118289 4118345 4118289 ID=MS.gene20181.t1.exon1;Parent=MS.gene20181.t1
chr4.4 CDS 4118289 4118345 4118289 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4118454 4118788 4118454 ID=MS.gene20181.t1.exon2;Parent=MS.gene20181.t1
chr4.4 CDS 4118454 4118788 4118454 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4119040 4119181 4119040 ID=MS.gene20181.t1.exon3;Parent=MS.gene20181.t1
chr4.4 CDS 4119040 4119181 4119040 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4119686 4119784 4119686 ID=MS.gene20181.t1.exon4;Parent=MS.gene20181.t1
chr4.4 CDS 4119686 4119784 4119686 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4119898 4119954 4119898 ID=MS.gene20181.t1.exon5;Parent=MS.gene20181.t1
chr4.4 CDS 4119898 4119954 4119898 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4120686 4120757 4120686 ID=MS.gene20181.t1.exon6;Parent=MS.gene20181.t1
chr4.4 CDS 4120686 4120757 4120686 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4121233 4121322 4121233 ID=MS.gene20181.t1.exon7;Parent=MS.gene20181.t1
chr4.4 CDS 4121233 4121322 4121233 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4122018 4122077 4122018 ID=MS.gene20181.t1.exon8;Parent=MS.gene20181.t1
chr4.4 CDS 4122018 4122077 4122018 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4122634 4122819 4122634 ID=MS.gene20181.t1.exon9;Parent=MS.gene20181.t1
chr4.4 CDS 4122634 4122819 4122634 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4123423 4123515 4123423 ID=MS.gene20181.t1.exon10;Parent=MS.gene20181.t1
chr4.4 CDS 4123423 4123515 4123423 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4123580 4123661 4123580 ID=MS.gene20181.t1.exon11;Parent=MS.gene20181.t1
chr4.4 CDS 4123580 4123661 4123580 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4123964 4124070 4123964 ID=MS.gene20181.t1.exon12;Parent=MS.gene20181.t1
chr4.4 CDS 4123964 4124070 4123964 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4125156 4125231 4125156 ID=MS.gene20181.t1.exon13;Parent=MS.gene20181.t1
chr4.4 CDS 4125156 4125231 4125156 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4125616 4125662 4125616 ID=MS.gene20181.t1.exon14;Parent=MS.gene20181.t1
chr4.4 CDS 4125616 4125662 4125616 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4125776 4125838 4125776 ID=MS.gene20181.t1.exon15;Parent=MS.gene20181.t1
chr4.4 CDS 4125776 4125838 4125776 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
chr4.4 exon 4126248 4126313 4126248 ID=MS.gene20181.t1.exon16;Parent=MS.gene20181.t1
chr4.4 CDS 4126248 4126313 4126248 ID=cds.MS.gene20181.t1;Parent=MS.gene20181.t1
Gene Sequence

>MS.gene20181

ATGGAGGCAACAATGTCCGCAGCATGCAAATCTCTCACCTCACCATCCACCGTCACAGTAACTCACAATTACTTCATCTATCTATTAATTCATCATTCTCAATTATCATTCCATTAATTAATTAATTAATTAATTGATTTCATTTCTGAATCTGATTGATCCAAGGGTTTATTTGCGGCGAGAGGAGGAGGAGGATTCAACAAGAATTCACATTTTCACTGCACTTTCTTGACCGGAACCAATAAGGTGAAGTTTCCGAGGCAAACTACTCAACCTTGTAAACAACGCCAAGCGCGTCATTGCGGTGCTCTTCGTGCTACTTGTCGTCTTGACAAGATTTTGGTTGCCAATCGAGGCGAGATTGCTGTTCGTGTTATTCGTACTGCTCATGAATTGGGGATTCCTTGTGTTGCTGTTTATTCCACCATTGATAAAGATGCTCTTCATGTTAAATTGGCTGATGAATCTGTTTGTATTGGTGAAGCTCCCAGTAGCCAATCGTACGTACTATACTAACTCCATTAATTCAAGCCGTGTCATTGTGTTATTATCTCTCTAGCACCGGCACTTTTCATAGAATAGAAGCCGTGTCAGCGTCGTATCCAGTGTCTCTGTGTCACTGTTTTATAAGTCATGGTTAATATTAAACTGCAAAAATCTTATTTTTTGTTATTTTATAAATACCATTTGGCAAATTCAAGTGCATTTTTGTAATTAGAATGTGTTTCTTTTTCTTTTTTTCTCTGTGCAGGTATTTAGTGATTCCAAATGTTCTGGCTGCTGCTACCAGCCGCCAATGTACCATGTTGCATCCTGGATATGGTTTTCTTGCTGAGAATGCTGTGTTTGTTGAAATGTGTAGAGATCATGGAGTCAATTTTATTGGACCAAACGTGAGTGGAAGGACTAGACTCTGCATCTTGTACAATACCGCATTTGTTTGGTTTATTTCTTGTGACTACTTTAGTTAAGGGATTTACGTTTTGAGTTTATAATATGACATTCACTTTCAAATTTTTGATTGAACGAGACTTATTCAAACTATTCTCTATTAAATCTTAAAACTAGCTTGAACTACATGAATTCCACTTCCAGTCAGTAAGCCATCAATGCATCAAAATGATATTAGTTTATAAACATGGTGTTATTGTATGATGGGGATTTCTGTTTATCCTCGATGATTGCAGAAAACAAAAATTTCTAGCTACTAGCTGGTAAGAAAGTTTTGTTGGAGTGTGGCATGACTAAAATGATAGTATTGTTAACACGTATGCAGAAAACGAACTTGCAAAGTTATGTTTGATTTTCTGCTGTTATGCTTGTTTTGTTCATAAAGTTCTCAAATATTTCCCCTTCAAATTATCTGGTAAAACTGAAAATTTAGCCAAACCTTTCAGCCTGACAGTATTCGGGTTATGGGTGACAAAGCAACTGCAAGAGAAACAATGAAGAAAGCAAATGTTCCTACTGTTCCAGGAAGTGAGGGGCTTTTGCAGGTATAATATTAGACACTGGTAGTATTGATAGCCTCAGATGATCAATAAAAATTCTGAAGTAACTTTCAGATTCCATGACATCAATTTACTTATAAGAATTCATTATTTGACAGACCACTGAAGAAGCTATCAGACTGGCACACGAGATTGGTTTCCCTGTGATGATCAAGGTAGATTGGCTTATAGTTCTGTATCTGCACAGCTTACTGCATTTTTGGTTAATTGGTTTCCCTTGTGCCCATTTGAACTGAATTCCAATTTTTCTGGTTGACATTTGATCATGCTTACATTATGTACTCTTAAATCCAATAATGTATATACTCGTGTCTGTGTGCTTCCTCCAAAGCACAACTTACTACATTTTTGTTTTTCTGTCCCTTAATCGGTAGAAATATACTTGGATTTTATCATTTGAAAATTTTAAATTTCTTGTGGGCATATAAGTGATGTATGACCCTTGAAATGTTTTTATCATTTGGAACTGGAGGTTTTTGTTCTATTGCAGGCTATTCAACTTACTACCATAATTATATTATTATGTTTGTGATACATTTAAAAAAATATGTATTGGTTTCTATTATAGTCTTATGATTCATATGTGCATTCGTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTGCTAACCCACCGTAATAGGAACTTTGACACCAGTAGGTGCCCAAAGGTATCCCCACGGCTTAGGCCAATTATGGGATTAATCCTTGAGGCAGTGGTTATTTTTTTATTTTTATCAGGGCTGGGGAATATGCATTAGTTTCTAATAGTCTTTCACGATATGTTTGGCTGCTTACTTAAACCAGTTGAATGGGCCATGTAATGTTCATGTGCAAAGTTTCCCTTTGCCAATTTATGTGGACTGACAAACATATGGTGTTTCTCAGGCAACCGCAGGTGGTGGAGGACGTGGCATGCGTCTTGCTAAAGAACCTAAAGAGTTTGTGAAATTATTACAGGTATTTGTTGCTGTGTGGTAGATTTTGTTCCATAGTCTGTATTATATTGCAGTTTCTTATTTATCTGTTTAAAATCAAATGGAATAGCCATATGCAAACGATAAAAAGGGTAACCTGAACTCAAATTAATATTAATATAGAAGCCATAGTTGTCAAATCTACCTATAATCAGATTTAAGCAAAAAACTTAAGGAAGCAAGAAATGGTTATGCCCCGAGTTTTTTTTTTATTGATTTACTTGGGGCCAACAGGTAGAAGAAGGTTTCTTGCGGTTTCAATGCAACAATAATTGCTATGCGATGAATACATATCTGTAGCAGAAGAAATTTTAGGGCCAGACCTTCACAATTGATTCTGATTGAAGGGATGGTGTTATTGTCATTGTAAATAGTTCTAGAGTTTATCCCATTGATGAGGAATATGTGTGTGTGTGTGTGCTTTTTTGGTTAATGTTTTCAATTTGATTTCTTTACAGCAAGCTAAGAGTGAGGCAGCTGCTGCATTTGGAAATGATGGGGTTTATTTGGAGAAGTACATTCAAAACCCAAGGCACATTGAATTCCAGGTAATGTTTGACTGTAGCCCTATTCCCTTCTGAAATCTGCAATTTCACTGTAACCTGGGGATCACAAGAATCCTCGGGGGAATTATATCTATAGAGATTGTGGATCCAAAGGAAACATTCAAGGTAGGATTGTTCAAAAAGACAACCTCAAACTTCTCATCAATGCAATAATTGGTTGCTTTCATCAAATGTGAATGTCCTGTCTGTCTACCTTGGAAGCTCTGAAATAGAATTTCAACTGTGCTCATTGATTGCATCATTTAATTTTGTTAACTAAATGTATTCAATAACGAAAAAGATATACTCCCTCTGTTCGTTCTTAGTTGTCCTTTTAGAGTTATCTACACATACCAAGAAAACTAATAAGTGTTGTTACTTTTGATTGAATTATTTGTTTTTTTTCCCTATAATACCATTAATTATTTATCATCTCATTTCACCTATTTCTCTACTGTAATAAATACTTAAGGGTGCTGTTGACAAAACAATAATCAATGTTGCTTGAACTTTGAGACGACAAGTAGATAAGAGCAAAGGTTTTCTATAAAAGTGCAAGTAATAAGGAATGGAGGGAGTATTTTCAAACATAAAAAATAACTGACCACTTTATAATTCCGTGAGCTTTAATGGTCGCGTGCATTTATAAATGATAATATTGTGTCTAATTCATCGATTTATGTTTTTATGGCTTGCAGGTTCTTGCAGATAAATATGGTAATGTTGTTCACTTTGGAGAACGTGATTGCAGTATCCAGGTACTTTGAACTAGTATCCTCAATCTCTTATCTGTCTGTATCAGCACTTAGTGTTTCTAAATAGCAGTTTGCATTATGTGTACTAGTACTCATTTTGCACAAATGACATTTAAGAAAACTGTGTTCTATATACATGAAATTTCCCACCTTAGTGAATTCAAGATAAAAAATTAAATATACTATTTAATACATATGAGATGCTTTTCTGACTGGAGTGTAAATTTTTTAATAATTCTTATTGCAAAAGATTAAAGTAATGTTTTGGCCCTAACTGAAATGATTACATTGTCATCATACTGATTATTTTAAAGTTTCTGTTCTGTTTTGTTCCCTGTGGAATTTCACAAGTGTGTAACTAATGCTGATATTGCTGGAGGATAAACTATGTAAAATACAATTAAAAGACCTTGAACTTGGTTTATCATATGGTTTCAATTTTATGAAACAAGTTTAGAGAATATCAAAAGTTGTGCTGATTTACTTTCCCATTATGTAATGATATTTCAAGAGATCTCACCTGAAGTAATTAGTCATATTGACTGTGATTTTTATGCAGAGGCGTAATCAGAAACTGCTCGAAGAAGCACCGTCTCCTGCATTGACCCCAGAGTTACGGAAGGCAATGGGAGATGCAGCAGTTCAGGCTGCCGCATCTATCGGTTACATAGGTGTTGGAACGGTTGAGTTCCTTTTGGATGAAAGGGGTTATTTTTACTTCATGGAGATGAACACTCGTATCCAGGTTGAAACCGATTTCTAATATACTTGTCTAGGGATGATAAATGTACTTGAACCTAATAGGTTCTGCTGTGCATAGGATTTTTTCTTATCGAATGGATTTGTACTCGGGCCCAAGTTTGTTAAATCACAAAAATATGTGGATGTTAGTGCAGATTTAAGTACTAAAGTACCCGACCTACCCTATACCTACTAACAATTGAATTTGATTAACATTAGCGGTAACGTAACGTATTTGTTTTAAAAAAACACAGTAAAGAGAGAGCATGGTCCTTTCAATTAATGTGCAGGTAATTGGTATGGGGCTGGGTTAATAAGAGCTCATCATGTATAGGTATGAGTATGAGCATAATGTTGCTATCTGTGCAAGTATGGGTTTGGGGACATGTCATTTTCTAAATTGTTGATTTATGAGCATGGATATTCTAGTACAGTAATATCTTACCTTCATCTCATCCATTACCATCTTTATGTTTGTCTAATAAGATACCCTAGACAAGAACTTTTGATAGAAAATGCCACATGTTCAATTTTTTGTGAGGTGTGCTGATTAGTTTCGGTAATTAATTCTTTTGTTTTTGTGGGTGGGGGTATTGGTCGAGATCAGGTTGAACATCCCGTGACAGAAATGATTTCCTCAGTTGATTTGATAGAAGAGCAAATTCGTGTAGCTATGGGAGAAAAGCTTCGATACAAACAGGTACTAAAAGAGATTTTACTTGCAATTTTTTAGAATCTTTCTCTTATCATTGTTTTTCCTACAGGAGGATATTGTACTCAGAGGACATTCCATTGAATGCCGTATCAATGCAGAAGATGCTTTTAAGGGATTTAGACCAGGGCCAGGTATCTTGATGTATCAGAGGCGTATTTCTGTATAAATGTGTTAAAAGATAAATTGTAATACAATTTCATTCTAACACCAGCTTCCTCGGCTGTAACATTTACCTAATGCACAATAGATTACATATAAACAATTCACCAAAAAATAGAAGATTACATATATACATTGGGTAGTTTTTATCAATGAGCTTCTTTTTCTCATTTGAAAATGGTTTGCCAAGTGTTTTGGATTTTATGGTTTTCATTTGTTTTAATTGAAATTGAAATTTTGTTGATCTATGGAATTTTCTCCTTTCAAACAACAGGTAGAATTACAGCATACTTGCCGTCTGGTGGTCCATTTGTCAGGATGGATAGCCATATTTATCCCGATTATGTTGTTCCTCCAAGCTATGACTCTCTTCTTGGAAAGGTGTGCCAATCTGTTCTCTTCGTAACATTTACTTGTCATCCGCATCTCAGTTGCTATACTACATAGTGCATCTCTTTATATTTCACATGAAATGCAAACGCATAAACTGTATATATATCTACTGAATGTATTCAGTTTAATGAAACCAACATCTAATGCGAATATATACTAATCCTTTTGTTACTCGATTAGTTTTTAAGTTTGTCAGCGAATGTTGGTTCAGTACCGAAGCTAAGAATTTGACTCGTTTCTTGCAAGAATGTGGGCTAAAATCCCGTTACCGATGTGGATACCTCATTGGTGGGTAATATGATAAGTACCTTTGTAAGGTTTGGTTGATTCTTGAGGATTCCCTGACCCTGCGGAGCCACATAGACAAAACTCGCGTAGACATATATTTATAAAAAAATAGTGCACTTTTGTGCGCACAGCCTCTTTGTGGTTGGGCTTTGGGATTTACGTAATGATAGGTTATAAATATCGATACCAATAGGGTGATAACTATTTTCACTTATGACTTTTAACATTAGCTGATTGTACAAGGAAATGTTTTATTTATTTTGTATGACGCTGTTTTAATTTGATTGAAATTTGTATTCTTGGAATGTACAACACTCACCCGTCCCGTCTCTAAATATAAAAGCTTCATCGGACTATTTCATACAAATCAAGAAAATTAGGCAGTACAATAAATTTGTCATCAATGTGTATTGATTTTCTAAAACTGCTGTTCAATTAAAGTTTTCCACTTCTATCAAGAGTCACTACCCGTTTAAATATTAGGCTTGTAATATTTCCTGAGTGATGACAACATTGAATTTATGTCTTTGTTGCCCTACACAAGTCAAGTGGAAATCATCGATGGATGAAAAGAGAAAAAAGTTGAGGGGTTCAATTCAAAGTATTTAATAAATAGGATCTAATATATTCCACATGTGTTTCACAGTTCACTTTATATTTTAAAACAATATCTAATATATATTTGTGTCTTGAGATATGATATGGTGAGAAGAACTTAGATGCAATAAATGTTTTTCTTAATCTGAAACTCTTCCTCATTTCTTGAGTTCGCGTACTTTTTGCAGCTGATTGTATGGGCTCCGACTAGAGAAAAAGCAATTGAACGCATGAAAAGGGCACTCGATGACACTATTATCACAGGTAAAGCAATCTGAATTTTGTTATTGTGACAATCCTTTAGATATCTGTACTTGGTGTAAGTCAATTGCATGCCAGAAGCCAGGAAATTGATGGAAGTCAAATACTTTTCCTTTGCACCTTGTTCATTCACTTTGCAAACAGAACAAAGGAGTTTGTTTAAGGACTTGAATTCTCTGCAGTTTGAAGCAAATTGCAGGAGTTGCAGTTTTCTGATCTTAGGGTTCAAATCAGTAGATCTTTGCCATTTTGTTTACTTATAATATACGTTTTAAGGGTCTACAGTTTTAAATCCTTCTGTTTTGAAAAGAACTGCAGATGATAATGATCCTTGGTTTAAACTCTTAGCTTTCTATGATATCGCTAACACTTTCAATTTTGTTACAGGAGTTCCTACAACAATTGATTATCATAAACTTATCCTTGACATAGAGGTAGGTGCATCTTTTATGTAATTTTTTGCTGACTTGTATCCTTTAATAGTATTTTATGTCAATCAGAACTCATAATTAAATTAACTAATGTATGCAATATCCTTGTATTACAGGATTTCAAAAATGGCAAGGTTGATACTGCTTTTATTCCAAAGCACGAGGAGGAGTTGGCTGTGGTAAGAACTAATATAGTGCTGAATATATTTATGTACCCTAGCGATGGCTTTCAAAATTATATCTCCCTGTTGGTGCTGCTGTGGAAATGTTTTGATAGGAAAACACTTGATAGGAAAACACACACGAACATGCCTTTAAAACCATTATATGTGATCTTTCAATACTATTTCATGGCTGATGGTTGTTCAAGTTTTGAGAATATTTGGAAGCTTTTAAATTCTAGCACTCTTTTCAACACTTCTTCTCTTATTGGCTGAAATTCATGTAGCTGTGGGATCCACTTAAATTTCATCCAATGAAAGGGGTAGTGTTGAAAAAGAGTATTAGAGCGATTGTTGCAGACTTGCAACACTTCTATTTTTGTTTTGTTTGATTTTGTAAATTATTTTTTGTTCGTGTCAAATGCAGCCCCCACAACAGAAGATGGTATTAGTTAACAAGGTGGTGACAGAACCAGCTGGCTCGACTGCCTGA

Protein sequence

>MS.gene20181.t1

MEATMSAACKSLTSPSTVTGLFAARGGGGFNKNSHFHCTFLTGTNKVKFPRQTTQPCKQRQARHCGALRATCRLDKILVANRGEIAVRVIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLVIPNVLAAATSRQCTMLHPGYGFLAENAVFVEMCRDHGVNFIGPNPDSIRVMGDKATARETMKKANVPTVPGSEGLLQTTEEAIRLAHEIGFPVMIKATAGGGGRGMRLAKEPKEFVKLLQQAKSEAAAAFGNDGVYLEKYIQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVQAAASIGYIGVGTVEFLLDERGYFYFMEMNTRIQVEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDAFKGFRPGPGRITAYLPSGGPFVRMDSHIYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALDDTIITGVPTTIDYHKLILDIEDFKNGKVDTAFIPKHEEELAVPPQQKMVLVNKVVTEPAGSTA