Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20294.t1 | XP_003611587.1 | 100 | 276 | 0 | 0 | 1 | 276 | 1 | 276 | 3.80E-147 | 530.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20294.t1 | Q9FJX3 | 66.3 | 276 | 93 | 0 | 1 | 276 | 1 | 276 | 6.2e-106 | 385.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20294.t1 | G7K2J4 | 100.0 | 276 | 0 | 0 | 1 | 276 | 1 | 276 | 2.7e-147 | 530.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene021652 | MS.gene20294 | PPI |
| MS.gene20294 | MS.gene20480 | PPI |
| MS.gene20294 | MS.gene79650 | PPI |
| MS.gene043298 | MS.gene20294 | PPI |
| MS.gene74761 | MS.gene20294 | PPI |
| MS.gene20294 | MS.gene030985 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20294.t1 | MTR_5g015580 | 100.000 | 276 | 0 | 0 | 1 | 276 | 1 | 276 | 0.0 | 546 |
| MS.gene20294.t1 | MTR_1g018205 | 56.727 | 275 | 119 | 0 | 2 | 276 | 3 | 277 | 5.49e-111 | 322 |
| MS.gene20294.t1 | MTR_6g011390 | 49.281 | 278 | 139 | 1 | 1 | 276 | 1 | 278 | 2.21e-92 | 275 |
| MS.gene20294.t1 | MTR_7g009330 | 50.182 | 275 | 137 | 0 | 2 | 276 | 3 | 277 | 4.15e-91 | 271 |
| MS.gene20294.t1 | MTR_8g469150 | 41.304 | 276 | 162 | 0 | 1 | 276 | 1 | 276 | 2.64e-76 | 233 |
| MS.gene20294.t1 | MTR_4g128300 | 42.652 | 279 | 157 | 2 | 1 | 276 | 1 | 279 | 1.45e-74 | 229 |
| MS.gene20294.t1 | MTR_8g469150 | 40.075 | 267 | 160 | 0 | 1 | 267 | 1 | 267 | 8.15e-71 | 219 |
| MS.gene20294.t1 | MTR_4g107840 | 26.148 | 283 | 163 | 5 | 1 | 276 | 1 | 244 | 1.59e-28 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20294.t1 | AT5G67500 | 66.304 | 276 | 93 | 0 | 1 | 276 | 1 | 276 | 3.23e-140 | 395 |
| MS.gene20294.t1 | AT5G67500 | 60.396 | 303 | 93 | 1 | 1 | 276 | 1 | 303 | 2.19e-134 | 382 |
| MS.gene20294.t1 | AT5G67500 | 65.918 | 267 | 91 | 0 | 1 | 267 | 1 | 267 | 4.39e-134 | 381 |
| MS.gene20294.t1 | AT5G15090 | 50.000 | 278 | 133 | 2 | 1 | 276 | 1 | 274 | 9.60e-90 | 268 |
| MS.gene20294.t1 | AT5G15090 | 50.000 | 278 | 133 | 2 | 1 | 276 | 1 | 274 | 9.60e-90 | 268 |
| MS.gene20294.t1 | AT3G01280 | 48.551 | 276 | 142 | 0 | 1 | 276 | 1 | 276 | 5.78e-88 | 263 |
| MS.gene20294.t1 | AT5G57490 | 46.377 | 276 | 146 | 1 | 1 | 276 | 1 | 274 | 1.07e-83 | 252 |
| MS.gene20294.t1 | AT3G49920 | 47.826 | 276 | 94 | 3 | 1 | 276 | 1 | 226 | 3.86e-81 | 244 |
| MS.gene20294.t1 | AT3G49920 | 64.634 | 82 | 29 | 0 | 1 | 82 | 1 | 82 | 1.73e-28 | 106 |
| MS.gene20294.t1 | AT3G49920 | 64.634 | 82 | 29 | 0 | 1 | 82 | 1 | 82 | 1.73e-28 | 106 |
| MS.gene20294.t1 | AT3G49920 | 67.123 | 73 | 24 | 0 | 1 | 73 | 1 | 73 | 3.01e-28 | 104 |
Find 74 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGATTAGTTTCACGAAAT+TGG | 0.171691 | 5.1:-8025068 | MS.gene20294:CDS |
| AAGTCAGTGCTGACTATTTC+TGG | 0.215709 | 5.1:-8024713 | MS.gene20294:CDS |
| TCTTCTTGATTTGGTCTAGA+TGG | 0.272788 | 5.1:+8024891 | None:intergenic |
| CAGCAGCACTCTTCTTGATT+TGG | 0.283867 | 5.1:+8024882 | None:intergenic |
| AAGCTGCCTGATTATAGTTC+TGG | 0.319469 | 5.1:-8025341 | MS.gene20294:CDS |
| TTTGGCTTTCTTGCCGATAT+CGG | 0.333599 | 5.1:+8029060 | None:intergenic |
| AAGAAAGGAGGACTCTCAAC+TGG | 0.374633 | 5.1:-8025570 | MS.gene20294:CDS |
| TCGTCTTTGTGGATGGAAAA+AGG | 0.380002 | 5.1:+8025375 | None:intergenic |
| TCTGATTTGTTGAGAACCTT+CGG | 0.383141 | 5.1:+8024846 | None:intergenic |
| GGTTCTCCAACCCTTGCATT+TGG | 0.392286 | 5.1:-8025142 | MS.gene20294:CDS |
| AATTGAAGCTATCGTCTTTG+TGG | 0.392722 | 5.1:+8025364 | None:intergenic |
| GTGGCAGAAACATCAAAGAT+AGG | 0.400234 | 5.1:+8025169 | None:intergenic |
| CTGATTTGTTGAGAACCTTC+GGG | 0.400674 | 5.1:+8024847 | None:intergenic |
| CAGTGTAGCGACTGAGGTTA+AGG | 0.410879 | 5.1:+8025201 | None:intergenic |
| GAAATAGTCAGCACTGACTT+TGG | 0.413358 | 5.1:+8024716 | None:intergenic |
| AAATAGTCAGCACTGACTTT+GGG | 0.425846 | 5.1:+8024717 | None:intergenic |
| CCGGGTCTCTACTCCGATAT+CGG | 0.434053 | 5.1:-8029073 | MS.gene20294:CDS |
| AGCAATGGCCAACCCAAACT+TGG | 0.435980 | 5.1:+8024658 | None:intergenic |
| CTTGCATTTGGTGCTGAGGC+AGG | 0.440987 | 5.1:-8025130 | MS.gene20294:CDS |
| ACTTCAACTGCTTTGAAGAA+AGG | 0.441282 | 5.1:-8025585 | MS.gene20294:CDS |
| AACAAATCAGAACACTATTA+CGG | 0.464512 | 5.1:-8024834 | MS.gene20294:CDS |
| GTTTCATCTTACAGCACTAC+TGG | 0.464789 | 5.1:-8028912 | MS.gene20294:CDS |
| TCAACAATCAAGGAAAGGTT+GGG | 0.467034 | 5.1:-8024763 | MS.gene20294:CDS |
| GCAGGCTATGATACTAAATC+TGG | 0.479364 | 5.1:-8025112 | MS.gene20294:CDS |
| ATCGAAGATGAGCAAGGGAC+CGG | 0.481251 | 5.1:-8029092 | None:intergenic |
| TCTTGATTTGGTCTAGATGG+TGG | 0.484846 | 5.1:+8024894 | None:intergenic |
| TTTGATGTTTCTGCCACTGT+TGG | 0.487886 | 5.1:-8025163 | MS.gene20294:CDS |
| TGGCAGAAACATCAAAGATA+GGG | 0.491347 | 5.1:+8025170 | None:intergenic |
| AACCCTTGCATTTGGTGCTG+AGG | 0.491987 | 5.1:-8025134 | MS.gene20294:CDS |
| TTCAACAATCAAGGAAAGGT+TGG | 0.493974 | 5.1:-8024764 | MS.gene20294:CDS |
| AGGACTCTCAACTGGGGATG+TGG | 0.494637 | 5.1:-8025562 | MS.gene20294:CDS |
| CTTTCCTATCAGTGGCGACA+AGG | 0.504369 | 5.1:-8024942 | MS.gene20294:intron |
| AAAGCTAGGTTCAACAATCA+AGG | 0.508554 | 5.1:-8024773 | MS.gene20294:CDS |
| CTCTCAACTGGGGATGTGGC+AGG | 0.509688 | 5.1:-8025558 | MS.gene20294:CDS |
| CAAGAAGAGTGCTGCTGTTG+TGG | 0.509776 | 5.1:-8024876 | MS.gene20294:CDS |
| ACCTTGCCAGAACTATAATC+AGG | 0.517672 | 5.1:+8025335 | None:intergenic |
| AGTAGTGCTGTAAGATGAAA+CGG | 0.520738 | 5.1:+8028914 | None:intergenic |
| TGATTTGGTCTAGATGGTGG+AGG | 0.521733 | 5.1:+8024897 | None:intergenic |
| GAAGCTATCGTCTTTGTGGA+TGG | 0.527003 | 5.1:+8025368 | None:intergenic |
| TGAGGTTGATACCAAGGCCC+TGG | 0.529736 | 5.1:-8024690 | MS.gene20294:CDS |
| CAGAACACTATTACGGTTGG+AGG | 0.533154 | 5.1:-8024827 | MS.gene20294:CDS |
| TTGGGAAGAGCTCGTGCTGT+AGG | 0.540312 | 5.1:+8024735 | None:intergenic |
| TCTAAAATCGAAGATGAGCA+AGG | 0.548154 | 5.1:-8029098 | None:intergenic |
| CTGCCTCAGCACCAAATGCA+AGG | 0.548233 | 5.1:+8025131 | None:intergenic |
| AATCAGAACACTATTACGGT+TGG | 0.550635 | 5.1:-8024830 | MS.gene20294:CDS |
| AGGTTAAGGTAGCATGGTCG+TGG | 0.557344 | 5.1:+8025215 | None:intergenic |
| TCAGCACCAAATGCAAGGGT+TGG | 0.562271 | 5.1:+8025136 | None:intergenic |
| GCAATGGCCAACCCAAACTT+GGG | 0.566984 | 5.1:+8024659 | None:intergenic |
| ACTTCAAGGTTTGAGAGCAA+TGG | 0.567035 | 5.1:+8024643 | None:intergenic |
| AGAAAGGAGGACTCTCAACT+GGG | 0.567353 | 5.1:-8025569 | MS.gene20294:CDS |
| TTCTGGTGAGGTTGATACCA+AGG | 0.578817 | 5.1:-8024696 | MS.gene20294:CDS |
| TCGAAGATGAGCAAGGGACC+GGG | 0.581110 | 5.1:-8029091 | None:intergenic |
| CTAGCTTTGATCTGTGTCAG+AGG | 0.591430 | 5.1:+8024788 | None:intergenic |
| CCGATATCGGAGTAGAGACC+CGG | 0.593325 | 5.1:+8029073 | None:intergenic |
| AGTGCTGACTATTTCTGGTG+AGG | 0.600743 | 5.1:-8024708 | MS.gene20294:CDS |
| CAACAATCAAGGAAAGGTTG+GGG | 0.608378 | 5.1:-8024762 | MS.gene20294:CDS |
| TGCCTCAGCACCAAATGCAA+GGG | 0.611427 | 5.1:+8025132 | None:intergenic |
| TAGGTTCAACAATCAAGGAA+AGG | 0.612340 | 5.1:-8024768 | MS.gene20294:CDS |
| TCAACTGCTTTGAAGAAAGG+AGG | 0.613940 | 5.1:-8025582 | MS.gene20294:CDS |
| CGACTGAGGTTAAGGTAGCA+TGG | 0.618567 | 5.1:+8025209 | None:intergenic |
| TTGCTTCAGTGTAGCGACTG+AGG | 0.620374 | 5.1:+8025195 | None:intergenic |
| GCCTGATTATAGTTCTGGCA+AGG | 0.623753 | 5.1:-8025336 | MS.gene20294:intron |
| GGCAGAAACATCAAAGATAG+GGG | 0.624754 | 5.1:+8025171 | None:intergenic |
| TTTCCTATCAGTGGCGACAA+GGG | 0.625564 | 5.1:-8024941 | MS.gene20294:intron |
| CTAAAATCGAAGATGAGCAA+GGG | 0.627918 | 5.1:-8029097 | None:intergenic |
| CTCTGACACAGATCAAAGCT+AGG | 0.632557 | 5.1:-8024787 | MS.gene20294:CDS |
| TAGCTTTGATCTGTGTCAGA+GGG | 0.634327 | 5.1:+8024789 | None:intergenic |
| TGAAACGGTAAGCTTCTGAT+CGG | 0.639844 | 5.1:+8028929 | None:intergenic |
| CTGTTGTGGATATTACCCGA+AGG | 0.654620 | 5.1:-8024862 | MS.gene20294:CDS |
| GATATCGGCAAGAAAGCCAA+AGG | 0.666859 | 5.1:-8029058 | MS.gene20294:intron |
| AGAACACTATTACGGTTGGA+GGG | 0.671397 | 5.1:-8024826 | MS.gene20294:CDS |
| AACAATCAAGGAAAGGTTGG+GGG | 0.680087 | 5.1:-8024761 | MS.gene20294:CDS |
| GAAAGGAGGACTCTCAACTG+GGG | 0.714176 | 5.1:-8025568 | MS.gene20294:CDS |
| AAGGGTTGGAGAACCAACAG+TGG | 0.718653 | 5.1:+8025150 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACATTAAAATAAAAAGAT+AGG | + | chr5.1:8025585-8025604 | None:intergenic | 10.0% |
| !! | ATGTAGAATATAATTTAAAA+AGG | - | chr5.1:8026761-8026780 | MS.gene20294:intron | 10.0% |
| !! | TAATAATAAAAAGTAAGAAA+GGG | + | chr5.1:8027539-8027558 | None:intergenic | 10.0% |
| !! | TGTAGAATATAATTTAAAAA+GGG | - | chr5.1:8026762-8026781 | MS.gene20294:intron | 10.0% |
| !! | TTAATAATAAAAAGTAAGAA+AGG | + | chr5.1:8027540-8027559 | None:intergenic | 10.0% |
| !! | TTATTAATTATAAATTGTAG+TGG | + | chr5.1:8024866-8024885 | None:intergenic | 10.0% |
| !!! | AAAGTGTTATAATAAAATAA+AGG | + | chr5.1:8026491-8026510 | None:intergenic | 10.0% |
| !!! | AATTTTCAAAAAAGAATTAA+TGG | + | chr5.1:8025452-8025471 | None:intergenic | 10.0% |
| !!! | ACAGTTTTATTTTTTTAATA+CGG | - | chr5.1:8027885-8027904 | MS.gene20294:intron | 10.0% |
| !!! | ATTTTCAAAAAAGAATTAAT+GGG | + | chr5.1:8025451-8025470 | None:intergenic | 10.0% |
| !!! | TATTTTAAATTCATAAATGT+TGG | - | chr5.1:8027288-8027307 | MS.gene20294:intron | 10.0% |
| !! | AGAGAAAAAATAATAAAAGA+GGG | + | chr5.1:8026070-8026089 | None:intergenic | 15.0% |
| !! | ATAAAATGTAAATGTAATGT+AGG | - | chr5.1:8026249-8026268 | MS.gene20294:intron | 15.0% |
| !! | GTAGAATATAATTTAAAAAG+GGG | - | chr5.1:8026763-8026782 | MS.gene20294:intron | 15.0% |
| !! | TAGAATATAATTTAAAAAGG+GGG | - | chr5.1:8026764-8026783 | MS.gene20294:intron | 15.0% |
| !!! | AACGAAATATTTTAATATCA+AGG | + | chr5.1:8025186-8025205 | None:intergenic | 15.0% |
| !!! | ACAATAACTCTTTTTATATA+GGG | + | chr5.1:8025290-8025309 | None:intergenic | 15.0% |
| !!! | AGCTTTATAAATTAATTATC+TGG | - | chr5.1:8026972-8026991 | MS.gene20294:intron | 15.0% |
| !!! | AGTTTTATTTTTTTAATACG+GGG | - | chr5.1:8027887-8027906 | MS.gene20294:intron | 15.0% |
| !!! | ATTTACATTTTATTACTTAC+AGG | + | chr5.1:8026242-8026261 | None:intergenic | 15.0% |
| !!! | CAGTTTTATTTTTTTAATAC+GGG | - | chr5.1:8027886-8027905 | MS.gene20294:intron | 15.0% |
| !!! | TACATTTTCATAATTCATTT+TGG | - | chr5.1:8027580-8027599 | MS.gene20294:intron | 15.0% |
| !!! | TTTACATTTTATTACTTACA+GGG | + | chr5.1:8026241-8026260 | None:intergenic | 15.0% |
| !!! | TTTTCAAAAAAGAATTAATG+GGG | + | chr5.1:8025450-8025469 | None:intergenic | 15.0% |
| !! | AGAATATAATTTAAAAAGGG+GGG | - | chr5.1:8026765-8026784 | MS.gene20294:intron | 20.0% |
| !! | ATCTAATGTTCATTTCAATA+TGG | - | chr5.1:8028103-8028122 | MS.gene20294:intron | 20.0% |
| !! | ATGCTTATTACCTAAAATTT+GGG | - | chr5.1:8027421-8027440 | MS.gene20294:intron | 20.0% |
| !! | CTTATGTTCAATTAATTCTT+GGG | - | chr5.1:8025051-8025070 | MS.gene20294:CDS | 20.0% |
| !! | GAGAGAAAAAATAATAAAAG+AGG | + | chr5.1:8026071-8026090 | None:intergenic | 20.0% |
| !! | TAAACAAAATAGCAATATCT+TGG | - | chr5.1:8026516-8026535 | MS.gene20294:intron | 20.0% |
| !! | TAAGAAAAATCACAAATCAA+TGG | - | chr5.1:8027020-8027039 | MS.gene20294:intron | 20.0% |
| !! | TTATGTTCAATTAATTCTTG+GGG | - | chr5.1:8025052-8025071 | MS.gene20294:CDS | 20.0% |
| !!! | ACTTATTGGCTAAAAAATTA+GGG | - | chr5.1:8027632-8027651 | MS.gene20294:intron | 20.0% |
| !!! | ATGATCAATTGATTTATCTA+AGG | - | chr5.1:8027259-8027278 | MS.gene20294:intron | 20.0% |
| !!! | CACAATAACTCTTTTTATAT+AGG | + | chr5.1:8025291-8025310 | None:intergenic | 20.0% |
| !!! | TACTTATTGGCTAAAAAATT+AGG | - | chr5.1:8027631-8027650 | MS.gene20294:intron | 20.0% |
| !!! | TACTTTTGTGAATTTAGTTT+TGG | - | chr5.1:8026355-8026374 | MS.gene20294:intron | 20.0% |
| !!! | TCTTTTTTGAAAATTTTGAC+CGG | - | chr5.1:8025457-8025476 | MS.gene20294:intron | 20.0% |
| !!! | TGATCAATTGATTTATCTAA+GGG | - | chr5.1:8027260-8027279 | MS.gene20294:intron | 20.0% |
| !!! | TTAGAATTTTGATACATTGA+AGG | - | chr5.1:8025377-8025396 | MS.gene20294:CDS | 20.0% |
| !!! | TTGAAATTTTGATACATTGA+GGG | + | chr5.1:8025125-8025144 | None:intergenic | 20.0% |
| !!! | TTTGAAATTTTGATACATTG+AGG | + | chr5.1:8025126-8025145 | None:intergenic | 20.0% |
| ! | AAAAAGTAAGAAAGGGATAA+AGG | + | chr5.1:8027532-8027551 | None:intergenic | 25.0% |
| ! | AAAAGAAACTGAATGTTTAG+AGG | - | chr5.1:8026590-8026609 | MS.gene20294:intron | 25.0% |
| ! | AAACGATTTATGAGCATAAA+TGG | + | chr5.1:8026881-8026900 | None:intergenic | 25.0% |
| ! | AACAAATCAGAACACTATTA+CGG | - | chr5.1:8028897-8028916 | MS.gene20294:intron | 25.0% |
| ! | AAGAGTTATTGTGAGTATTA+AGG | - | chr5.1:8025298-8025317 | MS.gene20294:intron | 25.0% |
| ! | AATACTATATGAACAATGTC+TGG | - | chr5.1:8026560-8026579 | MS.gene20294:intron | 25.0% |
| ! | ACAATAAGTAAGTACGTATA+AGG | + | chr5.1:8025258-8025277 | None:intergenic | 25.0% |
| ! | AGAAATTCCAAAAGGAATTA+TGG | + | chr5.1:8027381-8027400 | None:intergenic | 25.0% |
| ! | AGAGTTATTGTGAGTATTAA+GGG | - | chr5.1:8025299-8025318 | MS.gene20294:intron | 25.0% |
| ! | ATAATCATCAATAACGTACA+AGG | - | chr5.1:8027797-8027816 | MS.gene20294:intron | 25.0% |
| ! | ATACTATATGAACAATGTCT+GGG | - | chr5.1:8026561-8026580 | MS.gene20294:intron | 25.0% |
| ! | CATGCTTATTACCTAAAATT+TGG | - | chr5.1:8027420-8027439 | MS.gene20294:intron | 25.0% |
| ! | GAGTATTAAGGGATTATTTA+AGG | - | chr5.1:8025310-8025329 | MS.gene20294:intron | 25.0% |
| ! | GCTTATGTTCAATTAATTCT+TGG | - | chr5.1:8025050-8025069 | MS.gene20294:CDS | 25.0% |
| ! | TGCTTATTACCTAAAATTTG+GGG | - | chr5.1:8027422-8027441 | MS.gene20294:intron | 25.0% |
| ! | TTATGTACAGACTAAAATAC+TGG | + | chr5.1:8026150-8026169 | None:intergenic | 25.0% |
| !! | CTGATTCATATTTTATTACG+TGG | - | chr5.1:8026173-8026192 | MS.gene20294:intron | 25.0% |
| !! | GTGATTTTTCATCTTTTGTA+TGG | - | chr5.1:8028421-8028440 | MS.gene20294:intron | 25.0% |
| !! | GTTCTTTTTAAATTCATGTC+TGG | - | chr5.1:8027970-8027989 | MS.gene20294:intron | 25.0% |
| !! | TACATTTCCATAATTCCTTT+TGG | - | chr5.1:8027371-8027390 | MS.gene20294:intron | 25.0% |
| !! | TTCTGTATAAACTTGTTTCA+CGG | - | chr5.1:8026327-8026346 | MS.gene20294:intron | 25.0% |
| !! | TTGTACGTTATTGATGATTA+TGG | + | chr5.1:8027798-8027817 | None:intergenic | 25.0% |
| !!! | ACTGTTTACGATGTTTTTAA+AGG | + | chr5.1:8025560-8025579 | None:intergenic | 25.0% |
| !!! | CTCAATTTTGACATCAATAA+GGG | + | chr5.1:8028219-8028238 | None:intergenic | 25.0% |
| !!! | TCTCAATTTTGACATCAATA+AGG | + | chr5.1:8028220-8028239 | None:intergenic | 25.0% |
| !!! | TGTTTTAGATCTTTTGACAA+AGG | - | chr5.1:8024770-8024789 | MS.gene20294:CDS | 25.0% |
| !!! | TTACGATGTTTTTAAAGGAA+CGG | + | chr5.1:8025555-8025574 | None:intergenic | 25.0% |
| !!! | TTATTTTTTTAATACGGGGA+TGG | - | chr5.1:8027891-8027910 | MS.gene20294:intron | 25.0% |
| !!! | TTTTCATGTCTGAAATACTT+GGG | - | chr5.1:8026836-8026855 | MS.gene20294:intron | 25.0% |
| AATAAACATCAGCCTTAAGA+AGG | + | chr5.1:8026202-8026221 | None:intergenic | 30.0% | |
| ACTAACAAAATGCACAATCA+GGG | + | chr5.1:8025154-8025173 | None:intergenic | 30.0% | |
| ACTAACAAAGTAGACAATCA+GGG | - | chr5.1:8025348-8025367 | MS.gene20294:CDS | 30.0% | |
| ATGTAAGGAGAAATTCCAAA+AGG | + | chr5.1:8027389-8027408 | None:intergenic | 30.0% | |
| ATTCTGTATAAGTGCGATAA+TGG | + | chr5.1:8026464-8026483 | None:intergenic | 30.0% | |
| CAAATACTAAGAATGTGCTA+TGG | - | chr5.1:8028026-8028045 | MS.gene20294:intron | 30.0% | |
| CAACTTGGATGGATAAAATT+TGG | + | chr5.1:8025944-8025963 | None:intergenic | 30.0% | |
| CATAGCACATTCTTAGTATT+TGG | + | chr5.1:8028028-8028047 | None:intergenic | 30.0% | |
| CTTAAGTAAATCATCTCATG+TGG | - | chr5.1:8028292-8028311 | MS.gene20294:intron | 30.0% | |
| GAGATTTGTAACAGAAATCT+TGG | + | chr5.1:8028728-8028747 | None:intergenic | 30.0% | |
| GGAATTATGGAAATGTACAA+TGG | + | chr5.1:8027368-8027387 | None:intergenic | 30.0% | |
| TAATTGCATTATCAGATGTC+AGG | - | chr5.1:8024919-8024938 | MS.gene20294:CDS | 30.0% | |
| TATGAAGCTTAGATATAGAC+AGG | + | chr5.1:8025505-8025524 | None:intergenic | 30.0% | |
| TTTCTGTTACAAATCTCTAG+CGG | - | chr5.1:8028731-8028750 | MS.gene20294:intron | 30.0% | |
| ! | ACAAGTTTATACAGAAGCAT+TGG | + | chr5.1:8026323-8026342 | None:intergenic | 30.0% |
| ! | TAATGGGGTAATAGTCATTT+TGG | + | chr5.1:8025435-8025454 | None:intergenic | 30.0% |
| ! | TGTTTTGTCTATAGACAAAG+CGG | + | chr5.1:8026010-8026029 | None:intergenic | 30.0% |
| !! | ATTAATTTGTTAGCCGTTGT+CGG | - | chr5.1:8024987-8025006 | MS.gene20294:intron | 30.0% |
| !! | GTTTTCATGTCTGAAATACT+TGG | - | chr5.1:8026835-8026854 | MS.gene20294:intron | 30.0% |
| !! | TTATACAGAAGCATTGGATT+TGG | + | chr5.1:8026317-8026336 | None:intergenic | 30.0% |
| AAAAAGGTCAGTGAATGTGA+GGG | + | chr5.1:8028343-8028362 | None:intergenic | 35.0% | |
| AAACAAACTAACACACGACA+TGG | + | chr5.1:8025878-8025897 | None:intergenic | 35.0% | |
| AAAGCTAGGTTCAACAATCA+AGG | - | chr5.1:8028958-8028977 | MS.gene20294:intron | 35.0% | |
| AACATGTTCTTTCCTATCAG+TGG | - | chr5.1:8028781-8028800 | MS.gene20294:intron | 35.0% | |
| AATCAGAACACTATTACGGT+TGG | - | chr5.1:8028901-8028920 | MS.gene20294:intron | 35.0% | |
| AATTGAAGCTATCGTCTTTG+TGG | + | chr5.1:8028370-8028389 | None:intergenic | 35.0% | |
| ACTGAATGTTTAGAGGCAAT+TGG | - | chr5.1:8026597-8026616 | MS.gene20294:intron | 35.0% | |
| AGTAGTGCTGTAAGATGAAA+CGG | + | chr5.1:8024820-8024839 | None:intergenic | 35.0% | |
| ATTATCAGATGTCAGGTTAC+TGG | - | chr5.1:8024926-8024945 | MS.gene20294:CDS | 35.0% | |
| ATTGTACTTCCTGGTTATCA+TGG | - | chr5.1:8027995-8028014 | MS.gene20294:intron | 35.0% | |
| CAATATGGTTTCTTCCTTTC+AGG | - | chr5.1:8028118-8028137 | MS.gene20294:intron | 35.0% | |
| CAATGGCAACACTAATCATT+TGG | + | chr5.1:8027351-8027370 | None:intergenic | 35.0% | |
| CAATTGGATTGAATGTAGAC+AGG | - | chr5.1:8026613-8026632 | MS.gene20294:intron | 35.0% | |
| GACTAACAAAATGCACAATC+AGG | + | chr5.1:8025155-8025174 | None:intergenic | 35.0% | |
| GACTAACAAAGTAGACAATC+AGG | - | chr5.1:8025347-8025366 | MS.gene20294:CDS | 35.0% | |
| GATATTCAGCCTAACAATGT+CGG | + | chr5.1:8025822-8025841 | None:intergenic | 35.0% | |
| GTTGCATACTGCATACTTAT+TGG | - | chr5.1:8027618-8027637 | MS.gene20294:intron | 35.0% | |
| TAATTTCCAGACACAAAGCT+TGG | + | chr5.1:8027947-8027966 | None:intergenic | 35.0% | |
| TACCTAAAATTTGGGGATAG+TGG | - | chr5.1:8027429-8027448 | MS.gene20294:intron | 35.0% | |
| TACTATTCGTTCCTCATTCA+GGG | + | chr5.1:8025094-8025113 | None:intergenic | 35.0% | |
| TAGGTTCAACAATCAAGGAA+AGG | - | chr5.1:8028963-8028982 | MS.gene20294:intron | 35.0% | |
| TATTGAGTGGCCTATACAAA+AGG | + | chr5.1:8027317-8027336 | None:intergenic | 35.0% | |
| TCAACAATCAAGGAAAGGTT+GGG | - | chr5.1:8028968-8028987 | MS.gene20294:intron | 35.0% | |
| TGGAGAAAAAACCCAAGTTT+GGG | - | chr5.1:8029061-8029080 | MS.gene20294:CDS | 35.0% | |
| TGGCAGAAACATCAAAGATA+GGG | + | chr5.1:8028564-8028583 | None:intergenic | 35.0% | |
| TTACTATTCGTTCCTCATTC+AGG | + | chr5.1:8025095-8025114 | None:intergenic | 35.0% | |
| TTCAACAATCAAGGAAAGGT+TGG | - | chr5.1:8028967-8028986 | MS.gene20294:intron | 35.0% | |
| TTTAAAAAGGGGGGAATTCT+TGG | - | chr5.1:8026774-8026793 | MS.gene20294:intron | 35.0% | |
| TTTCAACTTGGTTGTTCTGA+AGG | - | chr5.1:8027687-8027706 | MS.gene20294:intron | 35.0% | |
| ! | AATATCTTTTGTGCTCTCCT+TGG | - | chr5.1:8025836-8025855 | MS.gene20294:intron | 35.0% |
| ! | ATCCACTATCCCCAAATTTT+AGG | + | chr5.1:8027434-8027453 | None:intergenic | 35.0% |
| ! | ATGTTGGAAGCCTTTTGTAT+AGG | - | chr5.1:8027304-8027323 | MS.gene20294:intron | 35.0% |
| ! | GAATCGATTCAATTCACCTT+TGG | + | chr5.1:8024692-8024711 | None:intergenic | 35.0% |
| ! | GATTTGTCATTTGCAGTTAG+AGG | - | chr5.1:8028483-8028502 | MS.gene20294:intron | 35.0% |
| ! | TAATCACACATCAGAGGTAT+CGG | + | chr5.1:8025023-8025042 | None:intergenic | 35.0% |
| ! | TACACTGTCTGAAATTGTGT+GGG | - | chr5.1:8028461-8028480 | MS.gene20294:intron | 35.0% |
| ! | TTTATCCATCCAAGTTGAGT+CGG | - | chr5.1:8025947-8025966 | MS.gene20294:intron | 35.0% |
| ! | TTTGTTGTCTATAGACGAAG+CGG | + | chr5.1:8025908-8025927 | None:intergenic | 35.0% |
| !! | AAATAGTCAGCACTGACTTT+GGG | + | chr5.1:8029017-8029036 | None:intergenic | 35.0% |
| !! | ACTTCAACTGCTTTGAAGAA+AGG | - | chr5.1:8028146-8028165 | MS.gene20294:intron | 35.0% |
| !! | TCTGATTTGTTGAGAACCTT+CGG | + | chr5.1:8028888-8028907 | None:intergenic | 35.0% |
| !! | TCTTCTTGATTTGGTCTAGA+TGG | + | chr5.1:8028843-8028862 | None:intergenic | 35.0% |
| !! | TGGGATTAGTTTCACGAAAT+TGG | - | chr5.1:8028663-8028682 | MS.gene20294:intron | 35.0% |
| !! | TGGTTTTCAAGACATGTTGT+TGG | - | chr5.1:8026407-8026426 | MS.gene20294:intron | 35.0% |
| !! | TGTATAAGTGCGATAATGGA+TGG | + | chr5.1:8026460-8026479 | None:intergenic | 35.0% |
| !!! | AAACTTGGGTTTTTTCTCCA+GGG | + | chr5.1:8029061-8029080 | None:intergenic | 35.0% |
| !!! | ATGGTTTTAGGAATCAGACA+TGG | - | chr5.1:8026712-8026731 | MS.gene20294:intron | 35.0% |
| AACAATCAAGGAAAGGTTGG+GGG | - | chr5.1:8028970-8028989 | MS.gene20294:intron | 40.0% | |
| AAGCTGCCTGATTATAGTTC+TGG | - | chr5.1:8028390-8028409 | MS.gene20294:intron | 40.0% | |
| AATTGAGACAGCGTCAATTG+TGG | - | chr5.1:8028232-8028251 | MS.gene20294:intron | 40.0% | |
| ACCTTGCCAGAACTATAATC+AGG | + | chr5.1:8028399-8028418 | None:intergenic | 40.0% | |
| AGAACACTATTACGGTTGGA+GGG | - | chr5.1:8028905-8028924 | MS.gene20294:intron | 40.0% | |
| AGACACTAATCACACATCAG+AGG | + | chr5.1:8025029-8025048 | None:intergenic | 40.0% | |
| AGACAGGAACTTTGACAGAA+GGG | - | chr5.1:8026629-8026648 | MS.gene20294:intron | 40.0% | |
| AGGCTCAGAAAAATTGTTGG+TGG | - | chr5.1:8027060-8027079 | MS.gene20294:intron | 40.0% | |
| ATTACGTGGTCACCTTCTTA+AGG | - | chr5.1:8026187-8026206 | MS.gene20294:intron | 40.0% | |
| ATTGAGACAGCGTCAATTGT+GGG | - | chr5.1:8028233-8028252 | MS.gene20294:intron | 40.0% | |
| CAACAATCAAGGAAAGGTTG+GGG | - | chr5.1:8028969-8028988 | MS.gene20294:intron | 40.0% | |
| CAGAGGCTCAGAAAAATTGT+TGG | - | chr5.1:8027057-8027076 | MS.gene20294:intron | 40.0% | |
| CTCCACACTTAAACGTGATT+TGG | - | chr5.1:8025648-8025667 | MS.gene20294:intron | 40.0% | |
| CTGGAGAAAAAACCCAAGTT+TGG | - | chr5.1:8029060-8029079 | MS.gene20294:CDS | 40.0% | |
| CTTTCTGCTAGTCATAAGAG+CGG | - | chr5.1:8026378-8026397 | MS.gene20294:intron | 40.0% | |
| GAAAAAACCCAAGTTTGGGT+TGG | - | chr5.1:8029065-8029084 | MS.gene20294:CDS | 40.0% | |
| GAAAAAGGTCAGTGAATGTG+AGG | + | chr5.1:8028344-8028363 | None:intergenic | 40.0% | |
| GAGATTGAGTGATTGATCAC+TGG | - | chr5.1:8027145-8027164 | MS.gene20294:intron | 40.0% | |
| GCAGGCTATGATACTAAATC+TGG | - | chr5.1:8028619-8028638 | MS.gene20294:intron | 40.0% | |
| GCGATAATACCGACATTGTT+AGG | - | chr5.1:8025810-8025829 | MS.gene20294:intron | 40.0% | |
| GGCAGAAACATCAAAGATAG+GGG | + | chr5.1:8028563-8028582 | None:intergenic | 40.0% | |
| GGTGATTCAAACGTATTGAG+TGG | + | chr5.1:8027330-8027349 | None:intergenic | 40.0% | |
| GTGGCAGAAACATCAAAGAT+AGG | + | chr5.1:8028565-8028584 | None:intergenic | 40.0% | |
| GTTTCATCTTACAGCACTAC+TGG | - | chr5.1:8024819-8024838 | MS.gene20294:CDS | 40.0% | |
| TAGACAGGAACTTTGACAGA+AGG | - | chr5.1:8026628-8026647 | MS.gene20294:intron | 40.0% | |
| TATGCAGTATGCAACATGTG+AGG | + | chr5.1:8027613-8027632 | None:intergenic | 40.0% | |
| TCAGACATGGAAGAAACAGA+TGG | - | chr5.1:8026725-8026744 | MS.gene20294:intron | 40.0% | |
| TCGTCTTTGTGGATGGAAAA+AGG | + | chr5.1:8028359-8028378 | None:intergenic | 40.0% | |
| TCTGATGTGTGATTAGTGTC+TGG | - | chr5.1:8025028-8025047 | MS.gene20294:intron | 40.0% | |
| TGAAACGGTAAGCTTCTGAT+CGG | + | chr5.1:8024805-8024824 | None:intergenic | 40.0% | |
| TGCCAAATCACGTTTAAGTG+TGG | + | chr5.1:8025653-8025672 | None:intergenic | 40.0% | |
| TGTCTATAGACAAAGCGGTT+TGG | + | chr5.1:8026005-8026024 | None:intergenic | 40.0% | |
| TTGAGAAATCTGTAGAGGAC+AGG | - | chr5.1:8027177-8027196 | MS.gene20294:intron | 40.0% | |
| TTGTTGTCTATAGACGAAGC+GGG | + | chr5.1:8025907-8025926 | None:intergenic | 40.0% | |
| TTTCAGCTTGGTTGTTCTGA+AGG | - | chr5.1:8027477-8027496 | MS.gene20294:intron | 40.0% | |
| ! | ATGTGAGGGTTGTATTGATC+TGG | + | chr5.1:8028329-8028348 | None:intergenic | 40.0% |
| ! | GACTACTTGCTACACATTCA+GGG | - | chr5.1:8025408-8025427 | MS.gene20294:intron | 40.0% |
| ! | GCAATGAAAGCTTTTCAGCT+TGG | - | chr5.1:8027465-8027484 | MS.gene20294:intron | 40.0% |
| ! | GCTCGCTTTAAATGTTTCTG+AGG | + | chr5.1:8026126-8026145 | None:intergenic | 40.0% |
| ! | GGTTGTATTGATCTGGAAGA+GGG | + | chr5.1:8028322-8028341 | None:intergenic | 40.0% |
| ! | GTACACTGTCTGAAATTGTG+TGG | - | chr5.1:8028460-8028479 | MS.gene20294:intron | 40.0% |
| ! | GTGAGTTGAGAAATCTGTAG+AGG | - | chr5.1:8027172-8027191 | MS.gene20294:intron | 40.0% |
| ! | TGACTACTTGCTACACATTC+AGG | - | chr5.1:8025407-8025426 | MS.gene20294:intron | 40.0% |
| ! | TTTGATGTTTCTGCCACTGT+TGG | - | chr5.1:8028568-8028587 | MS.gene20294:intron | 40.0% |
| !! | AAGTCAGTGCTGACTATTTC+TGG | - | chr5.1:8029018-8029037 | MS.gene20294:intron | 40.0% |
| !! | CTGATTTGTTGAGAACCTTC+GGG | + | chr5.1:8028887-8028906 | None:intergenic | 40.0% |
| !! | GAAATAGTCAGCACTGACTT+TGG | + | chr5.1:8029018-8029037 | None:intergenic | 40.0% |
| !! | GCGCATTTGATGATGATTGT+CGG | - | chr5.1:8025529-8025548 | MS.gene20294:CDS | 40.0% |
| !! | TAGCTTTGATCTGTGTCAGA+GGG | + | chr5.1:8028945-8028964 | None:intergenic | 40.0% |
| !! | TCAACTGCTTTGAAGAAAGG+AGG | - | chr5.1:8028149-8028168 | MS.gene20294:intron | 40.0% |
| !! | TCTTGATTTGGTCTAGATGG+TGG | + | chr5.1:8028840-8028859 | None:intergenic | 40.0% |
| !! | TTTGGCTTTCTTGCCGATAT+CGG | + | chr5.1:8024674-8024693 | None:intergenic | 40.0% |
| !!! | CAAACTTGGGTTTTTTCTCC+AGG | + | chr5.1:8029062-8029081 | None:intergenic | 40.0% |
| AAAACCATCCAAGCCTCCAA+GGG | + | chr5.1:8026700-8026719 | None:intergenic | 45.0% | |
| AAGAAAGGAGGACTCTCAAC+TGG | - | chr5.1:8028161-8028180 | MS.gene20294:intron | 45.0% | |
| AAGAATGTGCTATGGTTCCC+AGG | - | chr5.1:8028034-8028053 | MS.gene20294:intron | 45.0% | |
| AGAAAGGAGGACTCTCAACT+GGG | - | chr5.1:8028162-8028181 | MS.gene20294:intron | 45.0% | |
| AGAATGTGCTATGGTTCCCA+GGG | - | chr5.1:8028035-8028054 | MS.gene20294:intron | 45.0% | |
| AGACAGGACACAACATAGAC+AGG | + | chr5.1:8025489-8025508 | None:intergenic | 45.0% | |
| AGTCATAAGAGCGGAGCATA+TGG | - | chr5.1:8026387-8026406 | MS.gene20294:intron | 45.0% | |
| AGTTGAAGTGAGTGCCTGAA+AGG | + | chr5.1:8028135-8028154 | None:intergenic | 45.0% | |
| ATGCATGTTGACAGCAACGT+AGG | - | chr5.1:8027662-8027681 | MS.gene20294:intron | 45.0% | |
| CAAGCCTATTCCCACTAAGT+GGG | + | chr5.1:8025737-8025756 | None:intergenic | 45.0% | |
| CAGAACACTATTACGGTTGG+AGG | - | chr5.1:8028904-8028923 | MS.gene20294:intron | 45.0% | |
| CAGCAGCACTCTTCTTGATT+TGG | + | chr5.1:8028852-8028871 | None:intergenic | 45.0% | |
| CATGCAGTACGCATCATGTA+AGG | + | chr5.1:8027404-8027423 | None:intergenic | 45.0% | |
| CTATTCCCACTAAGTGGGAT+GGG | + | chr5.1:8025732-8025751 | None:intergenic | 45.0% | |
| CTCTGACACAGATCAAAGCT+AGG | - | chr5.1:8028944-8028963 | MS.gene20294:CDS | 45.0% | |
| CTGTTGTGGATATTACCCGA+AGG | - | chr5.1:8028869-8028888 | MS.gene20294:intron | 45.0% | |
| GAAGCTATCGTCTTTGTGGA+TGG | + | chr5.1:8028366-8028385 | None:intergenic | 45.0% | |
| GACAGGACACAACATAGACA+GGG | + | chr5.1:8025488-8025507 | None:intergenic | 45.0% | |
| GAGCCTCTGCTGTCTATTAT+TGG | + | chr5.1:8027046-8027065 | None:intergenic | 45.0% | |
| GATATCGGCAAGAAAGCCAA+AGG | - | chr5.1:8024673-8024692 | MS.gene20294:CDS | 45.0% | |
| GATTTGGCAAGAGTAGTACC+TGG | - | chr5.1:8025664-8025683 | MS.gene20294:intron | 45.0% | |
| GCTGTTGAAAGTTATCACGC+AGG | - | chr5.1:8026805-8026824 | MS.gene20294:intron | 45.0% | |
| GTACTTCCTGGTTATCATGG+TGG | - | chr5.1:8027998-8028017 | MS.gene20294:intron | 45.0% | |
| TAAAACCATCCAAGCCTCCA+AGG | + | chr5.1:8026701-8026720 | None:intergenic | 45.0% | |
| TCGGTATTATCGCTTGTGCT+AGG | + | chr5.1:8025803-8025822 | None:intergenic | 45.0% | |
| TGGCCAATAATAGACAGCAG+AGG | - | chr5.1:8027040-8027059 | MS.gene20294:intron | 45.0% | |
| TGTCTGGCTATTGTACTTCC+TGG | - | chr5.1:8027986-8028005 | MS.gene20294:intron | 45.0% | |
| TTCTTAATGCCGTACTGCAG+CGG | - | chr5.1:8027836-8027855 | MS.gene20294:intron | 45.0% | |
| TTTCCAGACACAAAGCTTGG+AGG | + | chr5.1:8027944-8027963 | None:intergenic | 45.0% | |
| TTTCCTATCAGTGGCGACAA+GGG | - | chr5.1:8028790-8028809 | MS.gene20294:intron | 45.0% | |
| ! | CTTGGACAAGAGTTGAGTTG+AGG | - | chr5.1:8026534-8026553 | MS.gene20294:intron | 45.0% |
| ! | GCAACGTAGGCTTTTCAACT+TGG | - | chr5.1:8027675-8027694 | MS.gene20294:intron | 45.0% |
| ! | GGGTTGTATTGATCTGGAAG+AGG | + | chr5.1:8028323-8028342 | None:intergenic | 45.0% |
| ! | GTCACTTTAGTCCCTGAATG+AGG | - | chr5.1:8025080-8025099 | MS.gene20294:CDS | 45.0% |
| ! | TTCATGTAGCCGACTCAACT+TGG | + | chr5.1:8025959-8025978 | None:intergenic | 45.0% |
| ! | TTGGAGGCTTGGATGGTTTT+AGG | - | chr5.1:8026700-8026719 | MS.gene20294:intron | 45.0% |
| ! | TTTCCTCCAAGCTTTGTGTC+TGG | - | chr5.1:8027938-8027957 | MS.gene20294:intron | 45.0% |
| !! | AGCGGTTTGGTTCAACACAA+TGG | + | chr5.1:8025992-8026011 | None:intergenic | 45.0% |
| !! | AGTGCTGACTATTTCTGGTG+AGG | - | chr5.1:8029023-8029042 | MS.gene20294:intron | 45.0% |
| !! | CGGTTTGGTTCAACACAATG+GGG | + | chr5.1:8025990-8026009 | None:intergenic | 45.0% |
| !! | CTAGCTTTGATCTGTGTCAG+AGG | + | chr5.1:8028946-8028965 | None:intergenic | 45.0% |
| !! | GCCTGATTATAGTTCTGGCA+AGG | - | chr5.1:8028395-8028414 | MS.gene20294:intron | 45.0% |
| !! | GCGATAATGGATGGTTCGTA+GGG | + | chr5.1:8026451-8026470 | None:intergenic | 45.0% |
| !! | GCGGTTTGGTTCAACACAAT+GGG | + | chr5.1:8025991-8026010 | None:intergenic | 45.0% |
| !! | TGATTTGGTCTAGATGGTGG+AGG | + | chr5.1:8028837-8028856 | None:intergenic | 45.0% |
| !! | TGCGATAATGGATGGTTCGT+AGG | + | chr5.1:8026452-8026471 | None:intergenic | 45.0% |
| !! | TTCTGGTGAGGTTGATACCA+AGG | - | chr5.1:8029035-8029054 | MS.gene20294:intron | 45.0% |
| AACATGAACCCGCTGCAGTA+CGG | + | chr5.1:8027848-8027867 | None:intergenic | 50.0% | |
| AAGGGTTGGAGAACCAACAG+TGG | + | chr5.1:8028584-8028603 | None:intergenic | 50.0% | |
| ACACACGACATGGAAGATCC+TGG | + | chr5.1:8025868-8025887 | None:intergenic | 50.0% | |
| ACCTGGATGTGTGACATCCT+AGG | - | chr5.1:8025681-8025700 | MS.gene20294:intron | 50.0% | |
| AGCAATGGCCAACCCAAACT+TGG | + | chr5.1:8029076-8029095 | None:intergenic | 50.0% | |
| AGGTTAAGGTAGCATGGTCG+TGG | + | chr5.1:8028519-8028538 | None:intergenic | 50.0% | |
| ATGCCAATGCGAGACTGACA+AGG | - | chr5.1:8027229-8027248 | MS.gene20294:intron | 50.0% | |
| CAGTGTAGCGACTGAGGTTA+AGG | + | chr5.1:8028533-8028552 | None:intergenic | 50.0% | |
| CCAAGCCTATTCCCACTAAG+TGG | + | chr5.1:8025738-8025757 | None:intergenic | 50.0% | |
| CCACTTAGTGGGAATAGGCT+TGG | - | chr5.1:8025735-8025754 | MS.gene20294:intron | 50.0% | |
| CCATCCCACTTAGTGGGAAT+AGG | - | chr5.1:8025730-8025749 | MS.gene20294:intron | 50.0% | |
| CCTATTCCCACTAAGTGGGA+TGG | + | chr5.1:8025733-8025752 | None:intergenic | 50.0% | |
| CGACTGAGGTTAAGGTAGCA+TGG | + | chr5.1:8028525-8028544 | None:intergenic | 50.0% | |
| CTTAGTGGGAATAGGCTTGG+TGG | - | chr5.1:8025738-8025757 | MS.gene20294:intron | 50.0% | |
| CTTTCCTATCAGTGGCGACA+AGG | - | chr5.1:8028789-8028808 | MS.gene20294:intron | 50.0% | |
| GAAAGGAGGACTCTCAACTG+GGG | - | chr5.1:8028163-8028182 | MS.gene20294:intron | 50.0% | |
| GCAATGGCCAACCCAAACTT+GGG | + | chr5.1:8029075-8029094 | None:intergenic | 50.0% | |
| GGAAAGCCACCATGATAACC+AGG | + | chr5.1:8028007-8028026 | None:intergenic | 50.0% | |
| GGTTCTCCAACCCTTGCATT+TGG | - | chr5.1:8028589-8028608 | MS.gene20294:intron | 50.0% | |
| GTGCAACACAAGGACTTCCT+AGG | + | chr5.1:8025701-8025720 | None:intergenic | 50.0% | |
| TCAAAAAACAGCGCCACCCT+TGG | - | chr5.1:8026681-8026700 | MS.gene20294:intron | 50.0% | |
| TCAGCACCAAATGCAAGGGT+TGG | + | chr5.1:8028598-8028617 | None:intergenic | 50.0% | |
| TCCTAGGATGTCACACATCC+AGG | + | chr5.1:8025685-8025704 | None:intergenic | 50.0% | |
| TCTTAATGCCGTACTGCAGC+GGG | - | chr5.1:8027837-8027856 | MS.gene20294:intron | 50.0% | |
| TGCCTCAGCACCAAATGCAA+GGG | + | chr5.1:8028602-8028621 | None:intergenic | 50.0% | |
| TTGCTTCAGTGTAGCGACTG+AGG | + | chr5.1:8028539-8028558 | None:intergenic | 50.0% | |
| ! | GAAGATCCTGGTTCGAACCA+AGG | + | chr5.1:8025856-8025875 | None:intergenic | 50.0% |
| ! | TGTAGCCGACTCAACTTGGA+TGG | + | chr5.1:8025955-8025974 | None:intergenic | 50.0% |
| !! | AACCCTTGCATTTGGTGCTG+AGG | - | chr5.1:8028597-8028616 | MS.gene20294:intron | 50.0% |
| !! | CAAGAAGAGTGCTGCTGTTG+TGG | - | chr5.1:8028855-8028874 | MS.gene20294:intron | 50.0% |
| AAAAACAGCGCCACCCTTGG+AGG | - | chr5.1:8026684-8026703 | MS.gene20294:intron | 55.0% | |
| AGGACTCTCAACTGGGGATG+TGG | - | chr5.1:8028169-8028188 | MS.gene20294:intron | 55.0% | |
| CAACATAGACAGGGCGACAC+CGG | + | chr5.1:8025479-8025498 | None:intergenic | 55.0% | |
| CCGATATCGGAGTAGAGACC+CGG | + | chr5.1:8024661-8024680 | None:intergenic | 55.0% | |
| CCGGGTCTCTACTCCGATAT+CGG | - | chr5.1:8024658-8024677 | MS.gene20294:CDS | 55.0% | |
| CTGCCTCAGCACCAAATGCA+AGG | + | chr5.1:8028603-8028622 | None:intergenic | 55.0% | |
| GCACCTTGTCAGTCTCGCAT+TGG | + | chr5.1:8027235-8027254 | None:intergenic | 55.0% | |
| TCACCCTTGTCGCCACTGAT+AGG | + | chr5.1:8028796-8028815 | None:intergenic | 55.0% | |
| TTCCCACTAAGTGGGATGGG+CGG | + | chr5.1:8025729-8025748 | None:intergenic | 55.0% | |
| TTGGGAAGAGCTCGTGCTGT+AGG | + | chr5.1:8028999-8029018 | None:intergenic | 55.0% | |
| ! | CAGCGGGTTCATGTTGAAGG+TGG | - | chr5.1:8027853-8027872 | MS.gene20294:intron | 55.0% |
| ! | CTGCAGCGGGTTCATGTTGA+AGG | - | chr5.1:8027850-8027869 | MS.gene20294:intron | 55.0% |
| ! | TGCTCTCCTTGGTTCGAACC+AGG | - | chr5.1:8025847-8025866 | MS.gene20294:intron | 55.0% |
| !! | CGGTGCTACATAGCCGACAA+CGG | + | chr5.1:8025003-8025022 | None:intergenic | 55.0% |
| !! | CTTGCATTTGGTGCTGAGGC+AGG | - | chr5.1:8028601-8028620 | MS.gene20294:intron | 55.0% |
| !! | TGAGGTTGATACCAAGGCCC+TGG | - | chr5.1:8029041-8029060 | MS.gene20294:intron | 55.0% |
| !!! | GGGTTTTTTCTCCAGGGCCT+TGG | + | chr5.1:8029055-8029074 | None:intergenic | 55.0% |
| ACCATCCAAGCCTCCAAGGG+TGG | + | chr5.1:8026697-8026716 | None:intergenic | 60.0% | |
| CTCAGCTGAGTCGTGACCCT+GGG | + | chr5.1:8028054-8028073 | None:intergenic | 60.0% | |
| CTCTCAACTGGGGATGTGGC+AGG | - | chr5.1:8028173-8028192 | MS.gene20294:intron | 60.0% | |
| TCCCACTAAGTGGGATGGGC+GGG | + | chr5.1:8025728-8025747 | None:intergenic | 60.0% | |
| TCCCGCCCATCCCACTTAGT+GGG | - | chr5.1:8025724-8025743 | MS.gene20294:intron | 60.0% | |
| TCTCAGCTGAGTCGTGACCC+TGG | + | chr5.1:8028055-8028074 | None:intergenic | 60.0% | |
| CTAAGTGGGATGGGCGGGAG+AGG | + | chr5.1:8025723-8025742 | None:intergenic | 65.0% | |
| CTCCCGCCCATCCCACTTAG+TGG | - | chr5.1:8025723-8025742 | MS.gene20294:intron | 65.0% | |
| GCCACCCTTGGAGGCTTGGA+TGG | - | chr5.1:8026693-8026712 | MS.gene20294:intron | 65.0% | |
| ! | GGCGGGAGAGGTGCAACACA+AGG | + | chr5.1:8025711-8025730 | None:intergenic | 65.0% |
| CAGCGCCACCCTTGGAGGCT+TGG | - | chr5.1:8026689-8026708 | MS.gene20294:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 8024646 | 8029107 | 8024646 | ID=MS.gene20294 |
| chr5.1 | mRNA | 8024646 | 8029107 | 8024646 | ID=MS.gene20294.t1;Parent=MS.gene20294 |
| chr5.1 | exon | 8029059 | 8029107 | 8029059 | ID=MS.gene20294.t1.exon1;Parent=MS.gene20294.t1 |
| chr5.1 | CDS | 8029059 | 8029107 | 8029059 | ID=cds.MS.gene20294.t1;Parent=MS.gene20294.t1 |
| chr5.1 | exon | 8028908 | 8028975 | 8028908 | ID=MS.gene20294.t1.exon2;Parent=MS.gene20294.t1 |
| chr5.1 | CDS | 8028908 | 8028975 | 8028908 | ID=cds.MS.gene20294.t1;Parent=MS.gene20294.t1 |
| chr5.1 | exon | 8025503 | 8025613 | 8025503 | ID=MS.gene20294.t1.exon3;Parent=MS.gene20294.t1 |
| chr5.1 | CDS | 8025503 | 8025613 | 8025503 | ID=cds.MS.gene20294.t1;Parent=MS.gene20294.t1 |
| chr5.1 | exon | 8025337 | 8025423 | 8025337 | ID=MS.gene20294.t1.exon4;Parent=MS.gene20294.t1 |
| chr5.1 | CDS | 8025337 | 8025423 | 8025337 | ID=cds.MS.gene20294.t1;Parent=MS.gene20294.t1 |
| chr5.1 | exon | 8025046 | 8025254 | 8025046 | ID=MS.gene20294.t1.exon5;Parent=MS.gene20294.t1 |
| chr5.1 | CDS | 8025046 | 8025254 | 8025046 | ID=cds.MS.gene20294.t1;Parent=MS.gene20294.t1 |
| chr5.1 | exon | 8024646 | 8024952 | 8024646 | ID=MS.gene20294.t1.exon6;Parent=MS.gene20294.t1 |
| chr5.1 | CDS | 8024646 | 8024952 | 8024646 | ID=cds.MS.gene20294.t1;Parent=MS.gene20294.t1 |
| Gene Sequence |
| Protein sequence |
