AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20346

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20346.t1 MTR_5g011540 96.869 511 16 0 1 511 1 511 0.0 1008
MS.gene20346.t1 MTR_6g043810 39.496 476 274 5 36 497 16 491 1.99e-104 322
MS.gene20346.t1 MTR_6g043810 39.496 476 274 5 36 497 26 501 2.47e-104 322
MS.gene20346.t1 MTR_5g067460 37.419 465 276 5 44 502 56 511 1.65e-100 313
MS.gene20346.t1 MTR_3g111020 37.166 487 285 6 13 486 15 493 1.74e-98 308
MS.gene20346.t1 MTR_5g010830 37.124 466 286 4 20 483 44 504 6.84e-98 306
MS.gene20346.t1 MTR_1g101500 37.778 495 291 7 25 506 39 529 8.00e-98 306
MS.gene20346.t1 MTR_0039s0080 35.388 503 317 6 11 510 7 504 7.36e-97 303
MS.gene20346.t1 MTR_4g027920 33.045 463 307 2 41 501 154 615 2.16e-89 286
MS.gene20346.t1 MTR_6g088805 34.874 476 298 4 18 493 10 473 7.44e-89 281
MS.gene20346.t1 MTR_8g102430 36.343 443 261 4 43 485 23 444 1.41e-87 276
MS.gene20346.t1 MTR_2g435930 31.772 491 303 4 28 497 4 483 9.06e-83 266
MS.gene20346.t1 MTR_6g081410 33.689 469 308 2 27 493 9 476 3.70e-74 243
MS.gene20346.t1 MTR_1g108810 32.609 460 304 3 22 478 12 468 1.33e-73 241
MS.gene20346.t1 MTR_6g081810 32.906 468 279 4 21 482 1 439 3.13e-69 229
MS.gene20346.t1 MTR_8g106670 32.071 449 298 5 38 483 7 451 5.84e-68 226
MS.gene20346.t1 MTR_6g081780 31.915 470 317 2 27 494 9 477 1.64e-67 225
MS.gene20346.t1 MTR_6g004220 32.174 460 299 5 30 483 11 463 3.30e-65 219
MS.gene20346.t1 MTR_6g081300 31.965 463 302 6 43 498 10 466 2.21e-64 216
MS.gene20346.t1 MTR_6g066380 32.949 434 288 2 51 482 35 467 9.69e-64 215
MS.gene20346.t1 MTR_1g108840 30.349 458 314 2 28 483 26 480 2.75e-63 214
MS.gene20346.t1 MTR_2g078930 30.081 492 318 6 17 495 10 488 3.58e-63 214
MS.gene20346.t1 MTR_6g004220 31.868 455 297 5 30 478 18 465 4.30e-63 214
MS.gene20346.t1 MTR_7g082810 29.814 483 311 7 30 501 7 472 3.26e-61 208
MS.gene20346.t1 MTR_2g078960 31.900 442 296 3 38 477 28 466 1.72e-59 204
MS.gene20346.t1 MTR_6g081400 30.201 447 304 5 41 483 13 455 1.72e-58 201
MS.gene20346.t1 MTR_2g079020 29.828 466 304 6 38 495 32 482 7.47e-58 200
MS.gene20346.t1 MTR_6g081310 31.648 455 285 8 68 502 21 469 9.62e-57 196
MS.gene20346.t1 MTR_2g078970 30.435 460 309 4 38 495 26 476 2.22e-56 196
MS.gene20346.t1 MTR_6g081390 29.047 451 304 7 41 483 10 452 1.14e-55 193
MS.gene20346.t1 MTR_2g022980 28.367 490 330 5 11 483 2 487 5.22e-55 192
MS.gene20346.t1 MTR_6g081240 30.227 440 298 6 43 478 10 444 3.87e-54 189
MS.gene20346.t1 MTR_2g088400 30.248 443 301 4 44 481 53 492 1.01e-52 186
MS.gene20346.t1 MTR_4g048000 28.719 484 335 4 2 483 28 503 1.26e-51 184
MS.gene20346.t1 MTR_7g082800 30.673 401 262 4 102 497 1 390 5.08e-51 179
MS.gene20346.t1 MTR_1g109060 29.978 447 300 6 43 483 24 463 2.88e-49 176
MS.gene20346.t1 MTR_1g108990 30.405 444 302 4 43 483 25 464 3.83e-49 176
MS.gene20346.t1 MTR_2g088400 30.049 406 279 3 44 447 53 455 2.58e-48 173
MS.gene20346.t1 MTR_1g021740 27.195 467 324 6 25 483 15 473 6.72e-48 173
MS.gene20346.t1 MTR_6g004220 32.258 372 239 5 30 395 18 382 7.43e-48 172
MS.gene20346.t1 MTR_1g109060 30.023 433 291 5 43 470 24 449 1.02e-47 172
MS.gene20346.t1 MTR_5g033100 26.994 489 333 7 11 483 14 494 4.99e-44 163
MS.gene20346.t1 MTR_8g069470 28.381 451 312 6 37 483 45 488 4.95e-42 157
MS.gene20346.t1 MTR_5g090290 27.549 461 324 5 40 498 43 495 5.37e-39 150
MS.gene20346.t1 MTR_8g063590 26.292 445 324 3 40 482 50 492 8.40e-39 148
MS.gene20346.t1 MTR_5g032720 26.852 432 313 2 54 484 47 476 1.52e-38 147
MS.gene20346.t1 MTR_1g100180 26.226 469 336 5 38 502 39 501 8.12e-38 145
MS.gene20346.t1 MTR_6g004220 32.886 298 187 5 30 321 18 308 2.42e-37 140
MS.gene20346.t1 MTR_3g099720 26.033 484 350 4 8 489 8 485 2.51e-37 144
MS.gene20346.t1 MTR_7g087400 27.115 461 313 6 33 483 20 467 9.35e-37 142
MS.gene20346.t1 MTR_6g047610 27.197 478 317 10 31 493 20 481 2.24e-36 141
MS.gene20346.t1 MTR_5g032750 26.566 463 334 3 26 484 16 476 4.73e-36 140
MS.gene20346.t1 MTR_7g087410 26.105 475 321 7 43 504 31 488 2.43e-34 135
MS.gene20346.t1 MTR_6g027200 29.688 448 299 8 43 483 36 474 1.39e-33 133
MS.gene20346.t1 MTR_3g099700 26.036 507 350 7 9 501 7 502 1.68e-33 133
MS.gene20346.t1 MTR_6g027190 28.000 450 304 8 43 483 24 462 2.55e-33 132
MS.gene20346.t1 MTR_6g047590 26.907 472 318 8 31 489 20 477 5.12e-33 131
MS.gene20346.t1 MTR_7g087430 25.899 417 284 5 102 509 1 401 1.16e-31 126
MS.gene20346.t1 MTR_7g087370 24.949 489 311 8 28 506 15 457 3.96e-31 125
MS.gene20346.t1 MTR_6g047640 26.667 480 327 8 26 494 18 483 4.71e-31 126
MS.gene20346.t1 MTR_6g047640 26.042 480 311 10 26 494 18 464 1.26e-30 124
MS.gene20346.t1 MTR_2g078990 28.296 311 212 4 187 495 4 305 2.72e-29 118
MS.gene20346.t1 MTR_5g087930 25.740 439 293 9 68 498 51 464 3.01e-29 120
MS.gene20346.t1 MTR_7g087410 25.428 409 283 5 105 504 4 399 6.55e-28 115
MS.gene20346.t1 MTR_2g079030 30.846 201 127 2 283 477 319 513 1.75e-24 107
MS.gene20346.t1 MTR_5g090280 23.474 426 277 10 102 493 1 411 3.71e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20346.t1 AT4G22790 58.455 479 197 2 16 493 3 480 0.0 561
MS.gene20346.t1 AT1G71870 38.105 475 277 5 35 492 15 489 9.15e-100 310
MS.gene20346.t1 AT4G29140 34.930 501 291 8 24 500 34 523 1.85e-95 300
MS.gene20346.t1 AT1G58340 39.738 458 265 3 43 495 57 508 3.08e-94 296
MS.gene20346.t1 AT5G19700 37.527 461 283 3 36 494 28 485 1.39e-93 294
MS.gene20346.t1 AT5G52050 32.979 470 301 4 50 510 41 505 2.94e-90 285
MS.gene20346.t1 AT2G38510 31.924 473 317 4 41 511 3 472 8.97e-84 268
MS.gene20346.t1 AT4G23030 36.952 479 291 5 30 502 15 488 1.11e-83 268
MS.gene20346.t1 AT5G49130 34.183 471 297 2 35 492 17 487 3.83e-83 266
MS.gene20346.t1 AT2G04040 33.184 446 291 3 41 483 24 465 6.70e-68 226
MS.gene20346.t1 AT1G66760 30.608 477 324 3 18 491 2 474 8.26e-68 226
MS.gene20346.t1 AT5G52450 32.120 467 311 4 38 501 20 483 6.35e-66 221
MS.gene20346.t1 AT1G66760 30.603 464 315 3 18 478 2 461 2.34e-65 219
MS.gene20346.t1 AT2G04080 30.454 463 315 3 24 483 7 465 4.07e-63 213
MS.gene20346.t1 AT2G34360 29.622 476 315 8 33 501 16 478 8.45e-63 213
MS.gene20346.t1 AT1G64820 31.847 471 300 6 33 492 18 478 1.28e-61 210
MS.gene20346.t1 AT1G71140 30.131 458 312 4 29 483 12 464 1.45e-61 209
MS.gene20346.t1 AT1G15160 30.769 442 289 4 68 502 55 486 2.08e-61 209
MS.gene20346.t1 AT1G15150 30.277 469 310 4 41 502 28 486 2.53e-61 209
MS.gene20346.t1 AT2G04070 30.670 463 314 3 24 483 7 465 3.18e-61 208
MS.gene20346.t1 AT2G04080 30.108 465 318 3 24 485 7 467 3.75e-61 208
MS.gene20346.t1 AT2G04100 30.562 445 304 2 41 483 27 468 6.43e-61 207
MS.gene20346.t1 AT1G73700 30.544 478 316 7 24 494 7 475 5.74e-60 205
MS.gene20346.t1 AT1G15170 32.215 447 288 4 44 483 34 472 9.06e-60 204
MS.gene20346.t1 AT1G66780 32.558 430 278 4 68 494 59 479 5.75e-59 202
MS.gene20346.t1 AT2G04050 31.303 476 303 5 21 483 1 465 8.35e-59 202
MS.gene20346.t1 AT2G04100 30.000 440 303 2 41 478 27 463 3.63e-58 200
MS.gene20346.t1 AT2G04090 29.213 445 310 2 41 483 27 468 2.67e-57 198
MS.gene20346.t1 AT1G15180 31.929 451 292 4 40 483 31 473 1.29e-55 194
MS.gene20346.t1 AT2G34360 28.361 476 279 9 33 501 16 436 6.83e-55 191
MS.gene20346.t1 AT3G23550 30.612 441 299 5 43 480 30 466 8.35e-52 183
MS.gene20346.t1 AT1G66760 30.051 396 270 3 18 410 2 393 5.06e-51 179
MS.gene20346.t1 AT1G11670 28.188 447 306 5 44 483 50 488 8.55e-51 181
MS.gene20346.t1 AT1G61890 28.228 457 311 6 44 493 47 493 8.84e-51 181
MS.gene20346.t1 AT1G61890 28.054 442 303 5 44 478 47 480 1.09e-48 175
MS.gene20346.t1 AT1G15170 31.006 358 232 4 133 483 4 353 1.78e-47 169
MS.gene20346.t1 AT1G47530 27.872 470 326 4 19 483 11 472 1.66e-46 169
MS.gene20346.t1 AT3G26590 27.975 479 324 8 33 501 28 495 6.86e-46 167
MS.gene20346.t1 AT3G23560 29.186 442 308 3 38 477 33 471 8.72e-46 167
MS.gene20346.t1 AT1G61890 28.842 423 292 5 44 462 47 464 1.14e-45 166
MS.gene20346.t1 AT3G21690 29.322 457 315 4 44 495 52 505 1.25e-45 167
MS.gene20346.t1 AT1G15150 29.178 377 250 4 133 502 4 370 1.85e-45 163
MS.gene20346.t1 AT4G21910 26.923 442 317 4 44 483 55 492 4.59e-44 163
MS.gene20346.t1 AT4G21910 26.923 442 317 4 44 483 55 492 4.59e-44 163
MS.gene20346.t1 AT1G12950 28.330 473 305 12 43 498 62 517 1.06e-43 162
MS.gene20346.t1 AT4G21910 27.088 443 315 5 44 483 57 494 1.04e-42 159
MS.gene20346.t1 AT4G21910 27.088 443 315 5 44 483 57 494 1.04e-42 159
MS.gene20346.t1 AT5G38030 27.292 469 328 5 24 483 18 482 1.18e-41 156
MS.gene20346.t1 AT3G26590 28.321 399 275 4 105 501 4 393 6.15e-41 152
MS.gene20346.t1 AT4G00350 24.490 490 340 5 12 483 47 524 1.76e-40 154
MS.gene20346.t1 AT4G21903 26.812 414 297 4 72 483 81 490 6.96e-40 151
MS.gene20346.t1 AT5G10420 28.540 452 305 6 54 499 48 487 7.96e-40 150
MS.gene20346.t1 AT1G23300 25.775 516 352 11 9 510 16 514 8.00e-39 148
MS.gene20346.t1 AT5G44050 28.698 453 308 7 46 493 46 488 1.22e-38 147
MS.gene20346.t1 AT4G21903 26.506 415 299 4 72 484 81 491 2.20e-38 147
MS.gene20346.t1 AT3G23560 30.058 346 237 3 38 381 33 375 1.71e-37 143
MS.gene20346.t1 AT4G21903 27.034 381 273 3 105 483 4 381 3.47e-37 141
MS.gene20346.t1 AT3G59030 24.414 512 353 9 13 501 2 502 6.15e-37 143
MS.gene20346.t1 AT5G65380 26.556 482 338 7 8 483 4 475 2.77e-36 140
MS.gene20346.t1 AT1G47530 27.604 384 266 3 105 483 4 380 1.36e-35 137
MS.gene20346.t1 AT4G25640 25.630 476 331 5 21 481 1 468 1.14e-34 136
MS.gene20346.t1 AT4G25640 25.630 476 331 5 21 481 1 468 1.59e-34 136
MS.gene20346.t1 AT1G33100 27.982 436 304 5 51 482 40 469 9.15e-34 134
MS.gene20346.t1 AT1G33110 28.959 442 292 6 51 482 43 472 2.41e-33 132
MS.gene20346.t1 AT1G33090 27.212 452 311 5 41 482 29 472 9.41e-33 131
MS.gene20346.t1 AT1G66760 28.190 337 235 3 145 478 1 333 1.72e-32 127
MS.gene20346.t1 AT4G25640 25.450 444 308 5 21 449 1 436 1.47e-31 127
MS.gene20346.t1 AT3G03620 26.190 462 323 7 28 481 21 472 3.45e-31 126
MS.gene20346.t1 AT3G03620 26.190 462 323 7 28 481 21 472 3.45e-31 126
MS.gene20346.t1 AT5G17700 25.263 475 324 9 30 492 20 475 3.48e-31 126
MS.gene20346.t1 AT5G17700 25.263 475 324 9 30 492 20 475 3.48e-31 126
MS.gene20346.t1 AT1G15180 30.147 272 175 4 133 397 4 267 2.92e-30 122
MS.gene20346.t1 AT1G33080 26.126 444 310 6 51 486 43 476 6.61e-29 120
MS.gene20346.t1 AT1G33080 25.909 440 308 6 51 482 43 472 2.32e-28 118
MS.gene20346.t1 AT3G59030 25.740 338 244 5 68 402 75 408 9.65e-24 103
MS.gene20346.t1 AT1G33110 30.055 366 226 8 51 402 43 392 2.24e-23 102
MS.gene20346.t1 AT5G17700 25.455 385 261 8 30 402 20 390 3.57e-21 96.3

Find 121 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGCTGCAAGGGGAATTT+GGG 0.166621 5.1:+5006283 MS.gene20346:CDS
CTCTTCTTTGGACTTCTTAC+TGG 0.194547 5.1:+5006533 MS.gene20346:CDS
GGCCTTGTTGGACTCTTCTT+TGG 0.195245 5.1:+5006521 MS.gene20346:CDS
TTCACTTTCGCTAACGTTAC+TGG 0.209280 5.1:+5005444 MS.gene20346:CDS
TGGTGGCTGCAAGGGGAATT+TGG 0.224291 5.1:+5006282 MS.gene20346:CDS
TCTTATTGTTGTTGTTCTTC+TGG 0.235360 5.1:+5005878 MS.gene20346:CDS
AGCTTAGCCGGTGGCGCGCT+CGG 0.247230 5.1:+5005420 MS.gene20346:CDS
ATGTCATCAACATGCAAATT+AGG 0.269692 5.1:+5005183 MS.gene20346:CDS
GAAATTCTAGTCTTGCTTAC+TGG 0.273403 5.1:+5006047 MS.gene20346:CDS
CTCTAGAATTAAAACATAAA+TGG 0.277546 5.1:-5005901 None:intergenic
CTTCCTACCATGTTTAGTTC+TGG 0.293099 5.1:+5005765 MS.gene20346:CDS
TGAAGCCACATGAAAGTAAT+AGG 0.326554 5.1:-5005597 None:intergenic
CATGATAGGGGCACTATAAA+TGG 0.328539 5.1:+5006320 MS.gene20346:CDS
AAGCTTCGTCTTGGCCTTGT+TGG 0.336381 5.1:+5006509 MS.gene20346:CDS
CAAGAAATTTCCACTGTTGC+TGG 0.340485 5.1:+5005654 MS.gene20346:CDS
TTTGAGAGTAGTATGTTAAC+AGG 0.351355 5.1:-5005810 None:intergenic
CCATGAGCCTGTCCACAAAT+AGG 0.351874 5.1:-5005504 None:intergenic
CACAGGGAACTTCTTTAACT+TGG 0.357675 5.1:-5006649 None:intergenic
GACAATTGTATTGTTGCTAT+TGG 0.359414 5.1:+5005566 MS.gene20346:CDS
GCTTAGCCGGTGGCGCGCTC+GGG 0.363500 5.1:+5005421 MS.gene20346:CDS
AGAGTATTATGGATTGGATT+AGG 0.376619 5.1:+5005967 MS.gene20346:CDS
TGCTGTTGTGATTGCTGTCT+TGG 0.380543 5.1:-5005373 None:intergenic
CAGTGGAAATTTCTTGTTGT+TGG 0.381992 5.1:-5005647 None:intergenic
TTTCTCAGTGATGCTGTCAT+TGG 0.384106 5.1:+5006136 MS.gene20346:CDS
GCTAAATTCATCAACATCAT+TGG 0.390023 5.1:-5005342 None:intergenic
GAGGGGTTTCCATGGCTGTT+TGG 0.394339 5.1:+5005847 MS.gene20346:CDS
ATTAGGCTAATCAAGCTATC+TGG 0.398009 5.1:+5005984 MS.gene20346:CDS
GGCAACTCTTCAGCCATGAT+AGG 0.398212 5.1:+5006306 MS.gene20346:CDS
GTGGCTGCAAGGGGAATTTG+GGG 0.399284 5.1:+5006284 MS.gene20346:CDS
TCAGAGGAGCTAAGAGTTCA+AGG 0.400477 5.1:+5005306 MS.gene20346:CDS
ACTGGCTTCTCTGTCTTGAA+TGG 0.406137 5.1:+5005462 MS.gene20346:CDS
CGCAGGTTGCACCGGCAGCT+TGG 0.414906 5.1:+5006256 MS.gene20346:CDS
GCTTGGTGATGGTGGCTGCA+AGG 0.424849 5.1:+5006273 MS.gene20346:CDS
CGCAAACGCCAAGCAAGCAT+TGG 0.427319 5.1:+5006076 MS.gene20346:CDS
CGCCAAGCTCGTTTGAGACA+CGG 0.430905 5.1:-5006175 None:intergenic
TGGGTTTGTAATGGTGGAGG+AGG 0.431977 5.1:-5005249 None:intergenic
CTTGGTGATGGTGGCTGCAA+GGG 0.432045 5.1:+5006274 MS.gene20346:CDS
TATTATTAGTATTCATTGCT+AGG 0.432752 5.1:+5006576 MS.gene20346:CDS
AGGGACAGCTCGACCTTGGT+TGG 0.445218 5.1:+5006421 MS.gene20346:CDS
TGGTACTTCTGCGTCATCAC+AGG 0.449230 5.1:-5006666 None:intergenic
TTTGCCTTCAAGCTTCGTCT+TGG 0.451622 5.1:+5006500 MS.gene20346:CDS
CATTTATAGTGCCCCTATCA+TGG 0.457544 5.1:-5006319 None:intergenic
ACCGGTACGCTCGGTCGGCT+TGG 0.459703 5.1:-5006202 None:intergenic
TAAAACTCCCAATGCTTGCT+TGG 0.462126 5.1:-5006084 None:intergenic
TCTAGAGAATCGAAAGGTAT+TGG 0.462933 5.1:+5005917 MS.gene20346:CDS
ACTTGCTAATATTTGTGCCT+TGG 0.463290 5.1:-5006621 None:intergenic
CGGTCAGCGCGTGTGTCTCT+AGG 0.465994 5.1:+5006221 MS.gene20346:CDS
TCTGAAAGCAGCGTCTTCGC+TGG 0.467091 5.1:-5005288 None:intergenic
TTGGGTATGTATGCAAATCT+AGG 0.477841 5.1:+5006440 MS.gene20346:CDS
CGTGGAAAGAAGGAGGATGG+TGG 0.478669 5.1:+5005940 MS.gene20346:CDS
ATGGTGGGATCAGAGTATTA+TGG 0.479182 5.1:+5005956 MS.gene20346:CDS
CTAGGTGAGCTCAGCTTAGC+CGG 0.481845 5.1:+5005408 MS.gene20346:CDS
GCAACTCTTCAGCCATGATA+GGG 0.483823 5.1:+5006307 MS.gene20346:CDS
AGTGACATAACAAACAAATC+AGG 0.486224 5.1:-5005699 None:intergenic
GAATGGTCTCTGTGGTGCCA+TGG 0.486890 5.1:+5005479 MS.gene20346:CDS
TTGTTGTCTCAACACATGTA+TGG 0.488430 5.1:+5006010 MS.gene20346:CDS
GGGACAGCTCGACCTTGGTT+GGG 0.495004 5.1:+5006422 MS.gene20346:CDS
GGGATCAGAGTATTATGGAT+TGG 0.495416 5.1:+5005961 MS.gene20346:CDS
ACCCGTGTCTCAAACGAGCT+TGG 0.500843 5.1:+5006173 MS.gene20346:CDS
CCTATTTGTGGACAGGCTCA+TGG 0.501376 5.1:+5005504 MS.gene20346:CDS
TATTCATTGCTAGGATAAAG+TGG 0.503924 5.1:+5006585 MS.gene20346:CDS
AAGGCCAAGACGAAGCTTGA+AGG 0.508427 5.1:-5006504 None:intergenic
GGGTCTAAGAGGGGTTTCCA+TGG 0.510224 5.1:+5005839 MS.gene20346:CDS
GCCAAGCTCGTTTGAGACAC+GGG 0.510977 5.1:-5006174 None:intergenic
AGTGAACCCGAGCGCGCCAC+CGG 0.515331 5.1:-5005427 None:intergenic
AAGGTATTGGCGTGGAAAGA+AGG 0.518806 5.1:+5005930 MS.gene20346:CDS
GCAAACGCCAAGCAAGCATT+GGG 0.519010 5.1:+5006077 MS.gene20346:CDS
AGCCACCATCACCAAGCTGC+CGG 0.520002 5.1:-5006267 None:intergenic
CACGCGCTGACCGGTACGCT+CGG 0.520838 5.1:-5006211 None:intergenic
CATGGAACCTATTTGTGGAC+AGG 0.523239 5.1:+5005497 MS.gene20346:CDS
TTGCACCGGCAGCTTGGTGA+TGG 0.528564 5.1:+5006262 MS.gene20346:CDS
GTGGAGGAGGTGACATTGGT+TGG 0.531112 5.1:-5005236 None:intergenic
TTCGAGGGACAGCTCGACCT+TGG 0.533695 5.1:+5006417 MS.gene20346:CDS
CACCGGCAGCTTGGTGATGG+TGG 0.540745 5.1:+5006265 MS.gene20346:CDS
CTAGAGACACACGCGCTGAC+CGG 0.547309 5.1:-5006220 None:intergenic
AGCGAAGACGCTGCTTTCAG+AGG 0.548362 5.1:+5005290 MS.gene20346:CDS
TGATGTTGATGAATTTAGCT+TGG 0.549712 5.1:+5005346 MS.gene20346:CDS
GTTTGTGGAGGCATAGTTCG+AGG 0.549958 5.1:+5006401 MS.gene20346:CDS
ATGCCTCCACAAACTGCCAA+TGG 0.550253 5.1:-5006392 None:intergenic
ATCAGTTATCCAAACAGCCA+TGG 0.552397 5.1:-5005856 None:intergenic
TGGCGTGGAAAGAAGGAGGA+TGG 0.552982 5.1:+5005937 MS.gene20346:CDS
AATGGTGGAGGAGGTGACAT+TGG 0.553401 5.1:-5005240 None:intergenic
AATGTTGTTGATGGCTCTAG+TGG 0.559949 5.1:+5006355 MS.gene20346:CDS
GTATGTATGCAAATCTAGGC+GGG 0.568375 5.1:+5006444 MS.gene20346:CDS
CGCTGACCGGTACGCTCGGT+CGG 0.568556 5.1:-5006207 None:intergenic
CTTGCTTGGCGTTTGCGAGG+TGG 0.568986 5.1:-5006070 None:intergenic
GGTGCCATGGAACCTATTTG+TGG 0.570180 5.1:+5005492 MS.gene20346:CDS
GTGGAAAGAAGGAGGATGGT+GGG 0.570875 5.1:+5005941 MS.gene20346:CDS
CTGTCCACAAATAGGTTCCA+TGG 0.574641 5.1:-5005496 None:intergenic
CAATTCCTATTACTTTCATG+TGG 0.579908 5.1:+5005592 MS.gene20346:CDS
ACCAAGCCGACCGAGCGTAC+CGG 0.581822 5.1:+5006201 MS.gene20346:CDS
GGAAACCCCTCTTAGACCCA+TGG 0.585351 5.1:-5005835 None:intergenic
TTTCCATTGGCAGTTTGTGG+AGG 0.586502 5.1:+5006389 MS.gene20346:CDS
TGGCTGCAAGGGGAATTTGG+GGG 0.591531 5.1:+5006285 MS.gene20346:CDS
AACATAAGTACCAGCAACAG+TGG 0.598946 5.1:-5005664 None:intergenic
GTGGGTGGAAGAAGCTGCCA+AGG 0.602858 5.1:+5006604 MS.gene20346:CDS
TTGGTGATGGTGGCTGCAAG+GGG 0.610161 5.1:+5006275 MS.gene20346:CDS
ATGCTTGCTTGGCGTTTGCG+AGG 0.612886 5.1:-5006073 None:intergenic
ACACCAGAACTAAACATGGT+AGG 0.622764 5.1:-5005768 None:intergenic
TTTAATTCTAGAGAATCGAA+AGG 0.625448 5.1:+5005911 MS.gene20346:CDS
GGTACTTCTGCGTCATCACA+GGG 0.629425 5.1:-5006665 None:intergenic
GTATTGGCGTGGAAAGAAGG+AGG 0.632332 5.1:+5005933 MS.gene20346:CDS
ATTCATTGCTAGGATAAAGT+GGG 0.633439 5.1:+5006586 MS.gene20346:CDS
CAACTCTTCAGCCATGATAG+GGG 0.633765 5.1:+5006308 MS.gene20346:CDS
GGTGAGCTCAGCTTAGCCGG+TGG 0.638224 5.1:+5005411 MS.gene20346:CDS
TTTGTGGAGGCATAGTTCGA+GGG 0.638241 5.1:+5006402 MS.gene20346:CDS
GACACGGGTGGAAACACAAG+TGG 0.646609 5.1:-5006159 None:intergenic
TGCTACACCAGAACTAAACA+TGG 0.651792 5.1:-5005772 None:intergenic
GTCCAAAGAAGAGTCCAACA+AGG 0.652628 5.1:-5006523 None:intergenic
CATTGCTAGGATAAAGTGGG+TGG 0.653404 5.1:+5006589 MS.gene20346:CDS
TCTGTCTTGAATGGTCTCTG+TGG 0.655881 5.1:+5005471 MS.gene20346:CDS
AGAATCGAAAGGTATTGGCG+TGG 0.660271 5.1:+5005922 MS.gene20346:CDS
TCAACACATGTATGGAGTGG+TGG 0.666907 5.1:+5006018 MS.gene20346:CDS
TCATGAGAAGTGTCTTGTGA+AGG 0.670945 5.1:-5005545 None:intergenic
ATAGTCAAAGTTCAACACAA+TGG 0.680940 5.1:-5006108 None:intergenic
GTCTCAACACATGTATGGAG+TGG 0.690627 5.1:+5006015 MS.gene20346:CDS
TGAGGCTCGTGAAAATGACA+AGG 0.694484 5.1:+5006691 MS.gene20346:CDS
AAGCTCGTTTGAGACACGGG+TGG 0.702539 5.1:-5006171 None:intergenic
GGTATGTATGCAAATCTAGG+CGG 0.704766 5.1:+5006443 MS.gene20346:CDS
TGACGCAGAAGTACCAACTG+AGG 0.735542 5.1:+5006673 MS.gene20346:CDS
TTTGCATACATACCCAACCA+AGG 0.735927 5.1:-5006434 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTAGTATTCATTGCT+AGG + chr5.1:5006576-5006595 MS.gene20346:CDS 20.0%
!!! CTCTAGAATTAAAACATAAA+TGG - chr5.1:5005904-5005923 None:intergenic 20.0%
!!! GACAAAATTTTGATTCATTT+TGG + chr5.1:5005624-5005643 MS.gene20346:CDS 20.0%
! AAAAAAGACAATGTTGTTGA+TGG + chr5.1:5006346-5006365 MS.gene20346:CDS 25.0%
!! TTTAATTCTAGAGAATCGAA+AGG + chr5.1:5005911-5005930 MS.gene20346:CDS 25.0%
AGTGACATAACAAACAAATC+AGG - chr5.1:5005702-5005721 None:intergenic 30.0%
ATACTACTCTCAAAAACCAT+GGG + chr5.1:5005819-5005838 MS.gene20346:CDS 30.0%
ATAGTCAAAGTTCAACACAA+TGG - chr5.1:5006111-5006130 None:intergenic 30.0%
ATGTCATCAACATGCAAATT+AGG + chr5.1:5005183-5005202 MS.gene20346:CDS 30.0%
ATTCATTGCTAGGATAAAGT+GGG + chr5.1:5006586-5006605 MS.gene20346:CDS 30.0%
CAATTCCTATTACTTTCATG+TGG + chr5.1:5005592-5005611 MS.gene20346:CDS 30.0%
GACAATTGTATTGTTGCTAT+TGG + chr5.1:5005566-5005585 MS.gene20346:CDS 30.0%
GCTAAATTCATCAACATCAT+TGG - chr5.1:5005345-5005364 None:intergenic 30.0%
TATTCATTGCTAGGATAAAG+TGG + chr5.1:5006585-5006604 MS.gene20346:CDS 30.0%
TTTGAGAGTAGTATGTTAAC+AGG - chr5.1:5005813-5005832 None:intergenic 30.0%
! TCTTATTGTTGTTGTTCTTC+TGG + chr5.1:5005878-5005897 MS.gene20346:CDS 30.0%
! TGATGTTGATGAATTTAGCT+TGG + chr5.1:5005346-5005365 MS.gene20346:CDS 30.0%
!! AGAGTATTATGGATTGGATT+AGG + chr5.1:5005967-5005986 MS.gene20346:CDS 30.0%
!! GGAGTTGTTTAATTTTCCAT+TGG + chr5.1:5006376-5006395 MS.gene20346:CDS 30.0%
!!! ACATTGGTTGGTTAGTTTTA+TGG - chr5.1:5005227-5005246 None:intergenic 30.0%
!!! TAGTTTTATGGTTTGAGCTA+TGG - chr5.1:5005215-5005234 None:intergenic 30.0%
!!! TCACATTTTTGGGTTTGTAA+TGG - chr5.1:5005261-5005280 None:intergenic 30.0%
ATTAGGCTAATCAAGCTATC+TGG + chr5.1:5005984-5006003 MS.gene20346:CDS 35.0%
CATACTACTCTCAAAAACCA+TGG + chr5.1:5005818-5005837 MS.gene20346:CDS 35.0%
TGAAGCCACATGAAAGTAAT+AGG - chr5.1:5005600-5005619 None:intergenic 35.0%
TTGGGTATGTATGCAAATCT+AGG + chr5.1:5006440-5006459 MS.gene20346:CDS 35.0%
TTGTTGTCTCAACACATGTA+TGG + chr5.1:5006010-5006029 MS.gene20346:CDS 35.0%
! AATTTTCCATTGGCAGTTTG+TGG + chr5.1:5006386-5006405 MS.gene20346:CDS 35.0%
! ACTTGCTAATATTTGTGCCT+TGG - chr5.1:5006624-5006643 None:intergenic 35.0%
! AGAGCTCAAGTAAGCTTTTA+AGG - chr5.1:5005733-5005752 None:intergenic 35.0%
! AGCAATCACAACAGCATTTT+TGG + chr5.1:5005380-5005399 MS.gene20346:CDS 35.0%
! CAGTGGAAATTTCTTGTTGT+TGG - chr5.1:5005650-5005669 None:intergenic 35.0%
! GAGCTCAAGTAAGCTTTTAA+GGG - chr5.1:5005732-5005751 None:intergenic 35.0%
! GCAATCACAACAGCATTTTT+GGG + chr5.1:5005381-5005400 MS.gene20346:CDS 35.0%
! TCTAGAGAATCGAAAGGTAT+TGG + chr5.1:5005917-5005936 MS.gene20346:CDS 35.0%
! TGGATTTGCGTCACATTTTT+GGG - chr5.1:5005271-5005290 None:intergenic 35.0%
!! GAAATTCTAGTCTTGCTTAC+TGG + chr5.1:5006047-5006066 MS.gene20346:CDS 35.0%
!!! CATTTTTGGGTTTGTAATGG+TGG - chr5.1:5005258-5005277 None:intergenic 35.0%
AAAAACCATGGGTCTAAGAG+GGG + chr5.1:5005830-5005849 MS.gene20346:CDS 40.0%
AACATAAGTACCAGCAACAG+TGG - chr5.1:5005667-5005686 None:intergenic 40.0%
AAGGCAAAAACAACACCAAG+GGG - chr5.1:5006488-5006507 None:intergenic 40.0%
ACACCAGAACTAAACATGGT+AGG - chr5.1:5005771-5005790 None:intergenic 40.0%
ATCAGTTATCCAAACAGCCA+TGG - chr5.1:5005859-5005878 None:intergenic 40.0%
CAAAAACCATGGGTCTAAGA+GGG + chr5.1:5005829-5005848 MS.gene20346:CDS 40.0%
CAAGAAATTTCCACTGTTGC+TGG + chr5.1:5005654-5005673 MS.gene20346:CDS 40.0%
CACAGGGAACTTCTTTAACT+TGG - chr5.1:5006652-5006671 None:intergenic 40.0%
CATTTATAGTGCCCCTATCA+TGG - chr5.1:5006322-5006341 None:intergenic 40.0%
CTCTTCTTTGGACTTCTTAC+TGG + chr5.1:5006533-5006552 MS.gene20346:CDS 40.0%
GAAGGCAAAAACAACACCAA+GGG - chr5.1:5006489-5006508 None:intergenic 40.0%
GGTATGTATGCAAATCTAGG+CGG + chr5.1:5006443-5006462 MS.gene20346:CDS 40.0%
GTATGTATGCAAATCTAGGC+GGG + chr5.1:5006444-5006463 MS.gene20346:CDS 40.0%
TAAAACTCCCAATGCTTGCT+TGG - chr5.1:5006087-5006106 None:intergenic 40.0%
TCAAAAACCATGGGTCTAAG+AGG + chr5.1:5005828-5005847 MS.gene20346:CDS 40.0%
TGAAGGCAAAAACAACACCA+AGG - chr5.1:5006490-5006509 None:intergenic 40.0%
TGCTACACCAGAACTAAACA+TGG - chr5.1:5005775-5005794 None:intergenic 40.0%
TTCACTTTCGCTAACGTTAC+TGG + chr5.1:5005444-5005463 MS.gene20346:CDS 40.0%
TTTCTCAGTGATGCTGTCAT+TGG + chr5.1:5006136-5006155 MS.gene20346:CDS 40.0%
TTTGCATACATACCCAACCA+AGG - chr5.1:5006437-5006456 None:intergenic 40.0%
! ATGGTGGGATCAGAGTATTA+TGG + chr5.1:5005956-5005975 MS.gene20346:CDS 40.0%
! CTAGGAATAGCTTTTATCGC+AGG + chr5.1:5006239-5006258 MS.gene20346:CDS 40.0%
! CTGGATTTGCGTCACATTTT+TGG - chr5.1:5005272-5005291 None:intergenic 40.0%
! CTTCCTACCATGTTTAGTTC+TGG + chr5.1:5005765-5005784 MS.gene20346:CDS 40.0%
! GGGATCAGAGTATTATGGAT+TGG + chr5.1:5005961-5005980 MS.gene20346:CDS 40.0%
!! AATGTTGTTGATGGCTCTAG+TGG + chr5.1:5006355-5006374 MS.gene20346:CDS 40.0%
!! CATGATAGGGGCACTATAAA+TGG + chr5.1:5006320-5006339 MS.gene20346:CDS 40.0%
!! TCATGAGAAGTGTCTTGTGA+AGG - chr5.1:5005548-5005567 None:intergenic 40.0%
!!! TCTAGGCGGGTTTTATTTTC+TGG + chr5.1:5006457-5006476 MS.gene20346:CDS 40.0%
!!! TTTTGGGTTTGTAATGGTGG+AGG - chr5.1:5005255-5005274 None:intergenic 40.0%
CAACTCTTCAGCCATGATAG+GGG + chr5.1:5006308-5006327 MS.gene20346:CDS 45.0%
CATGGAACCTATTTGTGGAC+AGG + chr5.1:5005497-5005516 MS.gene20346:CDS 45.0%
CATTGCTAGGATAAAGTGGG+TGG + chr5.1:5006589-5006608 MS.gene20346:CDS 45.0%
CTGTCCACAAATAGGTTCCA+TGG - chr5.1:5005499-5005518 None:intergenic 45.0%
GCAACTCTTCAGCCATGATA+GGG + chr5.1:5006307-5006326 MS.gene20346:CDS 45.0%
GTCCAAAGAAGAGTCCAACA+AGG - chr5.1:5006526-5006545 None:intergenic 45.0%
GTCTCAACACATGTATGGAG+TGG + chr5.1:5006015-5006034 MS.gene20346:CDS 45.0%
TCAACACATGTATGGAGTGG+TGG + chr5.1:5006018-5006037 MS.gene20346:CDS 45.0%
TCAGAGGAGCTAAGAGTTCA+AGG + chr5.1:5005306-5005325 MS.gene20346:CDS 45.0%
TCTGTCTTGAATGGTCTCTG+TGG + chr5.1:5005471-5005490 MS.gene20346:CDS 45.0%
TGAGGCTCGTGAAAATGACA+AGG + chr5.1:5006691-5006710 MS.gene20346:CDS 45.0%
TGCTGTTGTGATTGCTGTCT+TGG - chr5.1:5005376-5005395 None:intergenic 45.0%
TTTCCATTGGCAGTTTGTGG+AGG + chr5.1:5006389-5006408 MS.gene20346:CDS 45.0%
TTTGCCTTCAAGCTTCGTCT+TGG + chr5.1:5006500-5006519 MS.gene20346:CDS 45.0%
! ACTGGCTTCTCTGTCTTGAA+TGG + chr5.1:5005462-5005481 MS.gene20346:CDS 45.0%
! TCATTTTCACGAGCCTCAGT+TGG - chr5.1:5006689-5006708 None:intergenic 45.0%
! TTTGTGGAGGCATAGTTCGA+GGG + chr5.1:5006402-5006421 MS.gene20346:CDS 45.0%
!! AAGGTATTGGCGTGGAAAGA+AGG + chr5.1:5005930-5005949 MS.gene20346:CDS 45.0%
!! AGAATCGAAAGGTATTGGCG+TGG + chr5.1:5005922-5005941 MS.gene20346:CDS 45.0%
!!! ACAGCATTTTTGGGTCGACT+AGG + chr5.1:5005390-5005409 MS.gene20346:CDS 45.0%
AAGGCCAAGACGAAGCTTGA+AGG - chr5.1:5006507-5006526 None:intergenic 50.0%
ATGCCTCCACAAACTGCCAA+TGG - chr5.1:5006395-5006414 None:intergenic 50.0%
CCATGAGCCTGTCCACAAAT+AGG - chr5.1:5005507-5005526 None:intergenic 50.0%
CCTATTTGTGGACAGGCTCA+TGG + chr5.1:5005504-5005523 MS.gene20346:CDS 50.0%
GCAAACGCCAAGCAAGCATT+GGG + chr5.1:5006077-5006096 MS.gene20346:CDS 50.0%
GGCAACTCTTCAGCCATGAT+AGG + chr5.1:5006306-5006325 MS.gene20346:CDS 50.0%
GGTACTTCTGCGTCATCACA+GGG - chr5.1:5006668-5006687 None:intergenic 50.0%
GTGGAAAGAAGGAGGATGGT+GGG + chr5.1:5005941-5005960 MS.gene20346:CDS 50.0%
TGGTACTTCTGCGTCATCAC+AGG - chr5.1:5006669-5006688 None:intergenic 50.0%
! AATGGTGGAGGAGGTGACAT+TGG - chr5.1:5005243-5005262 None:intergenic 50.0%
! GCTTTTATCGCAGGTTGCAC+CGG + chr5.1:5006248-5006267 MS.gene20346:CDS 50.0%
! GGTGCCATGGAACCTATTTG+TGG + chr5.1:5005492-5005511 MS.gene20346:CDS 50.0%
! GTATTGGCGTGGAAAGAAGG+AGG + chr5.1:5005933-5005952 MS.gene20346:CDS 50.0%
! GTTTGTGGAGGCATAGTTCG+AGG + chr5.1:5006401-5006420 MS.gene20346:CDS 50.0%
! TGGGTTTGTAATGGTGGAGG+AGG - chr5.1:5005252-5005271 None:intergenic 50.0%
!! AAGCTTCGTCTTGGCCTTGT+TGG + chr5.1:5006509-5006528 MS.gene20346:CDS 50.0%
!! GGCCTTGTTGGACTCTTCTT+TGG + chr5.1:5006521-5006540 MS.gene20346:CDS 50.0%
!! TGACGCAGAAGTACCAACTG+AGG + chr5.1:5006673-5006692 MS.gene20346:CDS 50.0%
!!! TATTTTCTGGCTCTGCCCCT+TGG + chr5.1:5006470-5006489 MS.gene20346:CDS 50.0%
ACCCGTGTCTCAAACGAGCT+TGG + chr5.1:5006173-5006192 MS.gene20346:CDS 55.0%
ATGCTTGCTTGGCGTTTGCG+AGG - chr5.1:5006076-5006095 None:intergenic 55.0%
CGCAAACGCCAAGCAAGCAT+TGG + chr5.1:5006076-5006095 MS.gene20346:CDS 55.0%
CGTGGAAAGAAGGAGGATGG+TGG + chr5.1:5005940-5005959 MS.gene20346:CDS 55.0%
CTAGGTGAGCTCAGCTTAGC+CGG + chr5.1:5005408-5005427 MS.gene20346:CDS 55.0%
GACACGGGTGGAAACACAAG+TGG - chr5.1:5006162-5006181 None:intergenic 55.0%
GAGGGGTTTCCATGGCTGTT+TGG + chr5.1:5005847-5005866 MS.gene20346:CDS 55.0%
GGAAACCCCTCTTAGACCCA+TGG - chr5.1:5005838-5005857 None:intergenic 55.0%
GGGTCTAAGAGGGGTTTCCA+TGG + chr5.1:5005839-5005858 MS.gene20346:CDS 55.0%
GGTGGCTGCAAGGGGAATTT+GGG + chr5.1:5006283-5006302 MS.gene20346:CDS 55.0%
GTGGAGGAGGTGACATTGGT+TGG - chr5.1:5005239-5005258 None:intergenic 55.0%
GTGGCTGCAAGGGGAATTTG+GGG + chr5.1:5006284-5006303 MS.gene20346:CDS 55.0%
TCTGAAAGCAGCGTCTTCGC+TGG - chr5.1:5005291-5005310 None:intergenic 55.0%
TGGCGTGGAAAGAAGGAGGA+TGG + chr5.1:5005937-5005956 MS.gene20346:CDS 55.0%
TGGCTGCAAGGGGAATTTGG+GGG + chr5.1:5006285-5006304 MS.gene20346:CDS 55.0%
TGGTGGCTGCAAGGGGAATT+TGG + chr5.1:5006282-5006301 MS.gene20346:CDS 55.0%
! AAGCTCGTTTGAGACACGGG+TGG - chr5.1:5006174-5006193 None:intergenic 55.0%
! AGCGAAGACGCTGCTTTCAG+AGG + chr5.1:5005290-5005309 MS.gene20346:CDS 55.0%
! CGCCAAGCTCGTTTGAGACA+CGG - chr5.1:5006178-5006197 None:intergenic 55.0%
! GAATGGTCTCTGTGGTGCCA+TGG + chr5.1:5005479-5005498 MS.gene20346:CDS 55.0%
! GCCAAGCTCGTTTGAGACAC+GGG - chr5.1:5006177-5006196 None:intergenic 55.0%
!! CTTGGTGATGGTGGCTGCAA+GGG + chr5.1:5006274-5006293 MS.gene20346:CDS 55.0%
!! TTGGTGATGGTGGCTGCAAG+GGG + chr5.1:5006275-5006294 MS.gene20346:CDS 55.0%
AGCCACCATCACCAAGCTGC+CGG - chr5.1:5006270-5006289 None:intergenic 60.0%
AGGGACAGCTCGACCTTGGT+TGG + chr5.1:5006421-5006440 MS.gene20346:CDS 60.0%
CTTGCTTGGCGTTTGCGAGG+TGG - chr5.1:5006073-5006092 None:intergenic 60.0%
GGGACAGCTCGACCTTGGTT+GGG + chr5.1:5006422-5006441 MS.gene20346:CDS 60.0%
GTGGGTGGAAGAAGCTGCCA+AGG + chr5.1:5006604-5006623 MS.gene20346:CDS 60.0%
TTCGAGGGACAGCTCGACCT+TGG + chr5.1:5006417-5006436 MS.gene20346:CDS 60.0%
! CTAGAGACACACGCGCTGAC+CGG - chr5.1:5006223-5006242 None:intergenic 60.0%
! TTGCACCGGCAGCTTGGTGA+TGG + chr5.1:5006262-5006281 MS.gene20346:CDS 60.0%
!! GCTTGGTGATGGTGGCTGCA+AGG + chr5.1:5006273-5006292 MS.gene20346:CDS 60.0%
ACCAAGCCGACCGAGCGTAC+CGG + chr5.1:5006201-5006220 MS.gene20346:CDS 65.0%
CGGTCAGCGCGTGTGTCTCT+AGG + chr5.1:5006221-5006240 MS.gene20346:CDS 65.0%
GGTGAGCTCAGCTTAGCCGG+TGG + chr5.1:5005411-5005430 MS.gene20346:CDS 65.0%
!! CACCGGCAGCTTGGTGATGG+TGG + chr5.1:5006265-5006284 MS.gene20346:CDS 65.0%
ACCGGTACGCTCGGTCGGCT+TGG - chr5.1:5006205-5006224 None:intergenic 70.0%
AGCTTAGCCGGTGGCGCGCT+CGG + chr5.1:5005420-5005439 MS.gene20346:CDS 70.0%
AGTGAACCCGAGCGCGCCAC+CGG - chr5.1:5005430-5005449 None:intergenic 70.0%
CGCTGACCGGTACGCTCGGT+CGG - chr5.1:5006210-5006229 None:intergenic 70.0%
! CACGCGCTGACCGGTACGCT+CGG - chr5.1:5006214-5006233 None:intergenic 70.0%
! CGCAGGTTGCACCGGCAGCT+TGG + chr5.1:5006256-5006275 MS.gene20346:CDS 70.0%
GCTTAGCCGGTGGCGCGCTC+GGG + chr5.1:5005421-5005440 MS.gene20346:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 5005183 5006718 5005183 ID=MS.gene20346
chr5.1 mRNA 5005183 5006718 5005183 ID=MS.gene20346.t1;Parent=MS.gene20346
chr5.1 exon 5005183 5006718 5005183 ID=MS.gene20346.t1.exon1;Parent=MS.gene20346.t1
chr5.1 CDS 5005183 5006718 5005183 ID=cds.MS.gene20346.t1;Parent=MS.gene20346.t1
Gene Sequence

>MS.gene20346

ATGTCATCAACATGCAAATTAGGAGAAAACCATAGCTCAAACCATAAAACTAACCAACCAATGTCACCTCCTCCACCATTACAAACCCAAAAATGTGACGCAAATCCAGCGAAGACGCTGCTTTCAGAGGAGCTAAGAGTTCAAGGAAGATTAGCTTTTCCAATGATGTTGATGAATTTAGCTTGGTTTGCCAAGACAGCAATCACAACAGCATTTTTGGGTCGACTAGGTGAGCTCAGCTTAGCCGGTGGCGCGCTCGGGTTCACTTTCGCTAACGTTACTGGCTTCTCTGTCTTGAATGGTCTCTGTGGTGCCATGGAACCTATTTGTGGACAGGCTCATGGAGCTAAAAACGTGAGACTCCTTCACAAGACACTTCTCATGACAATTGTATTGTTGCTATTGGTAACAATTCCTATTACTTTCATGTGGCTTCATATTGACAAAATTTTGATTCATTTTGGCCAACAACAAGAAATTTCCACTGTTGCTGGTACTTATGTTTACTATCTCATACCTGATTTGTTTGTTATGTCACTCTTGTGTCCCTTAAAAGCTTACTTGAGCTCTCAAAGCATCACTCTTCCTACCATGTTTAGTTCTGGTGTAGCACTTGCTTTTCATGTTCCTGTTAACATACTACTCTCAAAAACCATGGGTCTAAGAGGGGTTTCCATGGCTGTTTGGATAACTGATCTTATTGTTGTTGTTCTTCTGGCCATTTATGTTTTAATTCTAGAGAATCGAAAGGTATTGGCGTGGAAAGAAGGAGGATGGTGGGATCAGAGTATTATGGATTGGATTAGGCTAATCAAGCTATCTGGATCTTGTTGTCTCAACACATGTATGGAGTGGTGGTGCTATGAAATTCTAGTCTTGCTTACTGGCCACCTCGCAAACGCCAAGCAAGCATTGGGAGTTTTAGCCATTGTGTTGAACTTTGACTATTTACTTTTCTCAGTGATGCTGTCATTGGCCACTTGTGTTTCCACCCGTGTCTCAAACGAGCTTGGCGCAAACCAAGCCGACCGAGCGTACCGGTCAGCGCGTGTGTCTCTAGGAATAGCTTTTATCGCAGGTTGCACCGGCAGCTTGGTGATGGTGGCTGCAAGGGGAATTTGGGGGCAACTCTTCAGCCATGATAGGGGCACTATAAATGGAGTAAAAAAGACAATGTTGTTGATGGCTCTAGTGGAGTTGTTTAATTTTCCATTGGCAGTTTGTGGAGGCATAGTTCGAGGGACAGCTCGACCTTGGTTGGGTATGTATGCAAATCTAGGCGGGTTTTATTTTCTGGCTCTGCCCCTTGGTGTTGTTTTTGCCTTCAAGCTTCGTCTTGGCCTTGTTGGACTCTTCTTTGGACTTCTTACTGGTATTGTTGTTTGCTTGTCATTATTATTAGTATTCATTGCTAGGATAAAGTGGGTGGAAGAAGCTGCCAAGGCACAAATATTAGCAAGTAACGACCAAGTTAAAGAAGTTCCCTGTGATGACGCAGAAGTACCAACTGAGGCTCGTGAAAATGACAAGGTGTAA
Protein sequence

>MS.gene20346.t1

MSSTCKLGENHSSNHKTNQPMSPPPPLQTQKCDANPAKTLLSEELRVQGRLAFPMMLMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNVRLLHKTLLMTIVLLLLVTIPITFMWLHIDKILIHFGQQQEISTVAGTYVYYLIPDLFVMSLLCPLKAYLSSQSITLPTMFSSGVALAFHVPVNILLSKTMGLRGVSMAVWITDLIVVVLLAIYVLILENRKVLAWKEGGWWDQSIMDWIRLIKLSGSCCLNTCMEWWCYEILVLLTGHLANAKQALGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQADRAYRSARVSLGIAFIAGCTGSLVMVAARGIWGQLFSHDRGTINGVKKTMLLMALVELFNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLRLGLVGLFFGLLTGIVVCLSLLLVFIARIKWVEEAAKAQILASNDQVKEVPCDDAEVPTEARENDKV