Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020465.t1 | XP_024634882.1 | 97.9 | 437 | 9 | 0 | 1 | 437 | 68 | 504 | 3.80E-242 | 847 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020465.t1 | Q9FKQ1 | 69.8 | 427 | 129 | 0 | 1 | 427 | 58 | 484 | 1.5e-175 | 617.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020465.t1 | G7J4H2 | 97.9 | 437 | 9 | 0 | 1 | 437 | 68 | 504 | 2.7e-242 | 847.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene020465 | MS.gene015487 | PPI |
MS.gene020465 | MS.gene042353 | PPI |
MS.gene05335 | MS.gene020465 | PPI |
MS.gene042352 | MS.gene020465 | PPI |
MS.gene20346 | MS.gene020465 | PPI |
MS.gene59999 | MS.gene020465 | PPI |
MS.gene59995 | MS.gene020465 | PPI |
MS.gene025762 | MS.gene020465 | PPI |
MS.gene81877 | MS.gene020465 | PPI |
MS.gene042358 | MS.gene020465 | PPI |
MS.gene05336 | MS.gene020465 | PPI |
MS.gene020465 | MS.gene59997 | PPI |
MS.gene020465 | MS.gene81884 | PPI |
MS.gene05341 | MS.gene020465 | PPI |
MS.gene22566 | MS.gene020465 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020465.t1 | MTR_3g099700 | 97.941 | 437 | 9 | 0 | 1 | 437 | 68 | 504 | 0.0 | 861 |
MS.gene020465.t1 | MTR_5g032720 | 70.534 | 431 | 127 | 0 | 1 | 431 | 58 | 488 | 0.0 | 635 |
MS.gene020465.t1 | MTR_5g032750 | 60.880 | 432 | 169 | 0 | 1 | 432 | 58 | 489 | 0.0 | 535 |
MS.gene020465.t1 | MTR_3g099720 | 60.284 | 423 | 167 | 1 | 1 | 423 | 63 | 484 | 0.0 | 522 |
MS.gene020465.t1 | MTR_7g087410 | 50.343 | 437 | 216 | 1 | 1 | 437 | 53 | 488 | 4.22e-157 | 453 |
MS.gene020465.t1 | MTR_1g021740 | 53.664 | 423 | 195 | 1 | 5 | 427 | 61 | 482 | 1.73e-155 | 449 |
MS.gene020465.t1 | MTR_7g087400 | 51.628 | 430 | 206 | 2 | 3 | 432 | 54 | 481 | 4.44e-155 | 448 |
MS.gene020465.t1 | MTR_8g069470 | 48.832 | 428 | 218 | 1 | 1 | 428 | 72 | 498 | 1.01e-147 | 430 |
MS.gene020465.t1 | MTR_6g027200 | 52.656 | 433 | 200 | 4 | 1 | 432 | 58 | 486 | 4.51e-146 | 426 |
MS.gene020465.t1 | MTR_7g087410 | 51.250 | 400 | 194 | 1 | 38 | 437 | 1 | 399 | 1.09e-145 | 421 |
MS.gene020465.t1 | MTR_1g100180 | 51.408 | 426 | 201 | 3 | 1 | 424 | 65 | 486 | 5.44e-145 | 423 |
MS.gene020465.t1 | MTR_7g087430 | 51.899 | 395 | 189 | 1 | 38 | 432 | 1 | 394 | 4.79e-143 | 414 |
MS.gene020465.t1 | MTR_4g048000 | 50.465 | 430 | 203 | 4 | 1 | 425 | 86 | 510 | 1.09e-142 | 417 |
MS.gene020465.t1 | MTR_6g027190 | 50.580 | 431 | 210 | 3 | 3 | 432 | 48 | 476 | 5.40e-139 | 407 |
MS.gene020465.t1 | MTR_2g088400 | 47.586 | 435 | 226 | 2 | 1 | 434 | 74 | 507 | 1.18e-138 | 407 |
MS.gene020465.t1 | MTR_5g033100 | 47.897 | 428 | 222 | 1 | 1 | 428 | 78 | 504 | 1.21e-138 | 407 |
MS.gene020465.t1 | MTR_2g022980 | 48.357 | 426 | 218 | 2 | 1 | 425 | 70 | 494 | 1.17e-136 | 401 |
MS.gene020465.t1 | MTR_7g087370 | 46.977 | 430 | 197 | 3 | 3 | 432 | 54 | 452 | 2.92e-131 | 386 |
MS.gene020465.t1 | MTR_6g047640 | 43.427 | 426 | 239 | 2 | 8 | 433 | 60 | 483 | 4.49e-125 | 371 |
MS.gene020465.t1 | MTR_6g047610 | 41.686 | 427 | 246 | 3 | 2 | 428 | 54 | 477 | 1.20e-120 | 360 |
MS.gene020465.t1 | MTR_2g088400 | 47.396 | 384 | 201 | 1 | 1 | 383 | 74 | 457 | 6.73e-120 | 357 |
MS.gene020465.t1 | MTR_6g047640 | 42.019 | 426 | 226 | 3 | 8 | 433 | 60 | 464 | 1.24e-119 | 357 |
MS.gene020465.t1 | MTR_5g090290 | 46.313 | 434 | 231 | 2 | 1 | 433 | 68 | 500 | 2.70e-118 | 357 |
MS.gene020465.t1 | MTR_6g047590 | 40.984 | 427 | 249 | 3 | 2 | 428 | 54 | 477 | 5.47e-110 | 332 |
MS.gene020465.t1 | MTR_8g063590 | 43.287 | 432 | 239 | 6 | 2 | 430 | 76 | 504 | 2.85e-107 | 327 |
MS.gene020465.t1 | MTR_5g087930 | 42.130 | 432 | 225 | 7 | 4 | 432 | 51 | 460 | 3.82e-95 | 294 |
MS.gene020465.t1 | MTR_6g081410 | 35.963 | 431 | 272 | 3 | 1 | 428 | 47 | 476 | 1.92e-82 | 262 |
MS.gene020465.t1 | MTR_6g081780 | 35.613 | 424 | 269 | 3 | 1 | 421 | 47 | 469 | 2.64e-79 | 253 |
MS.gene020465.t1 | MTR_7g082810 | 34.332 | 434 | 281 | 3 | 1 | 433 | 42 | 472 | 3.54e-79 | 253 |
MS.gene020465.t1 | MTR_6g066380 | 35.377 | 424 | 270 | 3 | 1 | 421 | 49 | 471 | 9.50e-78 | 249 |
MS.gene020465.t1 | MTR_6g081390 | 36.490 | 433 | 256 | 8 | 1 | 423 | 34 | 457 | 1.25e-76 | 246 |
MS.gene020465.t1 | MTR_6g004220 | 36.066 | 427 | 270 | 3 | 1 | 425 | 45 | 470 | 1.32e-76 | 246 |
MS.gene020465.t1 | MTR_1g108810 | 34.058 | 414 | 271 | 2 | 1 | 413 | 56 | 468 | 1.01e-75 | 244 |
MS.gene020465.t1 | MTR_8g106670 | 34.346 | 428 | 271 | 6 | 1 | 423 | 34 | 456 | 1.04e-74 | 241 |
MS.gene020465.t1 | MTR_6g081300 | 33.486 | 436 | 285 | 3 | 1 | 432 | 32 | 466 | 6.32e-74 | 239 |
MS.gene020465.t1 | MTR_1g108840 | 35.142 | 424 | 269 | 4 | 1 | 421 | 63 | 483 | 6.82e-74 | 240 |
MS.gene020465.t1 | MTR_6g081400 | 35.897 | 429 | 264 | 7 | 1 | 423 | 37 | 460 | 6.72e-73 | 236 |
MS.gene020465.t1 | MTR_5g090280 | 36.471 | 425 | 232 | 5 | 38 | 433 | 1 | 416 | 1.53e-72 | 234 |
MS.gene020465.t1 | MTR_2g079020 | 35.109 | 413 | 266 | 2 | 1 | 412 | 59 | 470 | 1.53e-72 | 236 |
MS.gene020465.t1 | MTR_2g078930 | 34.180 | 433 | 274 | 4 | 1 | 432 | 65 | 487 | 3.24e-72 | 235 |
MS.gene020465.t1 | MTR_6g004220 | 35.663 | 415 | 264 | 3 | 1 | 413 | 52 | 465 | 1.22e-71 | 234 |
MS.gene020465.t1 | MTR_6g081240 | 33.735 | 415 | 272 | 3 | 1 | 413 | 31 | 444 | 1.93e-71 | 232 |
MS.gene020465.t1 | MTR_1g108990 | 32.629 | 426 | 285 | 2 | 1 | 425 | 47 | 471 | 4.21e-71 | 232 |
MS.gene020465.t1 | MTR_6g081810 | 32.779 | 421 | 257 | 3 | 1 | 421 | 49 | 443 | 6.55e-68 | 223 |
MS.gene020465.t1 | MTR_7g082800 | 34.684 | 395 | 252 | 3 | 38 | 431 | 1 | 390 | 8.01e-68 | 221 |
MS.gene020465.t1 | MTR_2g078970 | 33.256 | 433 | 278 | 4 | 1 | 432 | 53 | 475 | 1.50e-67 | 223 |
MS.gene020465.t1 | MTR_2g078960 | 34.541 | 414 | 267 | 3 | 1 | 412 | 55 | 466 | 1.77e-67 | 223 |
MS.gene020465.t1 | MTR_1g109060 | 32.227 | 422 | 284 | 2 | 1 | 421 | 46 | 466 | 3.69e-65 | 216 |
MS.gene020465.t1 | MTR_6g081310 | 32.339 | 436 | 277 | 6 | 1 | 421 | 18 | 450 | 1.28e-62 | 209 |
MS.gene020465.t1 | MTR_1g109060 | 31.643 | 414 | 281 | 2 | 1 | 413 | 46 | 458 | 4.47e-61 | 206 |
MS.gene020465.t1 | MTR_6g043810 | 31.075 | 428 | 282 | 4 | 3 | 419 | 47 | 472 | 1.24e-53 | 187 |
MS.gene020465.t1 | MTR_6g043810 | 31.075 | 428 | 282 | 4 | 3 | 419 | 57 | 482 | 1.24e-53 | 187 |
MS.gene020465.t1 | MTR_6g004220 | 34.104 | 346 | 226 | 2 | 1 | 344 | 52 | 397 | 8.79e-50 | 175 |
MS.gene020465.t1 | MTR_5g010830 | 27.962 | 422 | 296 | 5 | 2 | 419 | 88 | 505 | 5.02e-49 | 175 |
MS.gene020465.t1 | MTR_1g101500 | 28.375 | 437 | 299 | 7 | 2 | 431 | 87 | 516 | 6.06e-47 | 169 |
MS.gene020465.t1 | MTR_5g067460 | 26.728 | 434 | 306 | 6 | 3 | 431 | 79 | 505 | 1.25e-45 | 166 |
MS.gene020465.t1 | MTR_6g088805 | 29.594 | 419 | 288 | 5 | 2 | 418 | 50 | 463 | 7.50e-45 | 163 |
MS.gene020465.t1 | MTR_2g078990 | 32.051 | 312 | 201 | 4 | 122 | 432 | 3 | 304 | 4.94e-44 | 156 |
MS.gene020465.t1 | MTR_0039s0080 | 25.959 | 443 | 318 | 5 | 2 | 437 | 61 | 500 | 1.66e-42 | 157 |
MS.gene020465.t1 | MTR_3g111020 | 26.066 | 422 | 302 | 5 | 3 | 419 | 75 | 491 | 2.30e-42 | 157 |
MS.gene020465.t1 | MTR_8g102430 | 27.857 | 420 | 277 | 7 | 2 | 418 | 46 | 442 | 6.30e-41 | 151 |
MS.gene020465.t1 | MTR_6g004220 | 34.615 | 260 | 168 | 2 | 1 | 258 | 52 | 311 | 2.47e-36 | 136 |
MS.gene020465.t1 | MTR_4g027920 | 25.000 | 424 | 304 | 6 | 2 | 417 | 179 | 596 | 6.51e-35 | 137 |
MS.gene020465.t1 | MTR_2g079030 | 37.629 | 194 | 120 | 1 | 217 | 410 | 319 | 511 | 3.86e-33 | 131 |
MS.gene020465.t1 | MTR_2g435930 | 24.601 | 439 | 309 | 6 | 2 | 421 | 42 | 477 | 1.20e-31 | 126 |
MS.gene020465.t1 | MTR_5g011540 | 28.571 | 427 | 282 | 8 | 4 | 418 | 68 | 483 | 8.57e-30 | 121 |
MS.gene020465.t1 | MTR_4g131290 | 45.763 | 59 | 32 | 0 | 51 | 109 | 13 | 71 | 2.17e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020465.t1 | AT5G65380 | 69.789 | 427 | 129 | 0 | 1 | 427 | 58 | 484 | 0.0 | 613 |
MS.gene020465.t1 | AT5G44050 | 65.728 | 426 | 146 | 0 | 3 | 428 | 63 | 488 | 0.0 | 582 |
MS.gene020465.t1 | AT5G10420 | 65.403 | 422 | 146 | 0 | 3 | 424 | 61 | 482 | 0.0 | 550 |
MS.gene020465.t1 | AT1G33110 | 50.114 | 437 | 217 | 1 | 1 | 437 | 57 | 492 | 8.18e-150 | 435 |
MS.gene020465.t1 | AT1G47530 | 49.535 | 430 | 216 | 1 | 1 | 430 | 56 | 484 | 3.31e-147 | 428 |
MS.gene020465.t1 | AT1G11670 | 49.070 | 430 | 217 | 2 | 1 | 429 | 71 | 499 | 6.98e-146 | 425 |
MS.gene020465.t1 | AT1G33100 | 49.199 | 437 | 221 | 1 | 1 | 437 | 54 | 489 | 2.81e-145 | 423 |
MS.gene020465.t1 | AT1G61890 | 48.019 | 429 | 221 | 2 | 1 | 428 | 68 | 495 | 3.81e-145 | 423 |
MS.gene020465.t1 | AT1G33080 | 49.539 | 434 | 218 | 1 | 1 | 434 | 57 | 489 | 3.59e-143 | 418 |
MS.gene020465.t1 | AT3G21690 | 51.044 | 431 | 209 | 2 | 1 | 430 | 73 | 502 | 4.91e-143 | 418 |
MS.gene020465.t1 | AT1G33090 | 49.199 | 437 | 221 | 1 | 1 | 437 | 57 | 492 | 1.98e-142 | 416 |
MS.gene020465.t1 | AT1G33080 | 50.718 | 418 | 205 | 1 | 1 | 418 | 57 | 473 | 2.01e-139 | 408 |
MS.gene020465.t1 | AT4G00350 | 49.296 | 426 | 214 | 2 | 1 | 426 | 109 | 532 | 9.36e-139 | 408 |
MS.gene020465.t1 | AT5G38030 | 47.235 | 434 | 228 | 1 | 1 | 434 | 66 | 498 | 1.22e-138 | 407 |
MS.gene020465.t1 | AT1G61890 | 48.309 | 414 | 212 | 2 | 1 | 413 | 68 | 480 | 2.22e-138 | 406 |
MS.gene020465.t1 | AT3G26590 | 46.698 | 424 | 225 | 1 | 1 | 424 | 66 | 488 | 2.49e-137 | 403 |
MS.gene020465.t1 | AT1G47530 | 49.873 | 393 | 196 | 1 | 38 | 430 | 1 | 392 | 1.80e-133 | 389 |
MS.gene020465.t1 | AT4G25640 | 49.650 | 429 | 214 | 2 | 4 | 432 | 58 | 484 | 7.93e-133 | 391 |
MS.gene020465.t1 | AT4G25640 | 49.650 | 429 | 214 | 2 | 4 | 432 | 58 | 484 | 3.99e-132 | 390 |
MS.gene020465.t1 | AT1G12950 | 45.833 | 432 | 233 | 1 | 1 | 432 | 88 | 518 | 5.22e-131 | 388 |
MS.gene020465.t1 | AT4G21903 | 46.512 | 430 | 227 | 3 | 1 | 429 | 74 | 501 | 1.27e-129 | 384 |
MS.gene020465.t1 | AT4G21910 | 46.437 | 435 | 226 | 4 | 1 | 432 | 76 | 506 | 3.16e-128 | 380 |
MS.gene020465.t1 | AT4G21910 | 46.437 | 435 | 226 | 4 | 1 | 432 | 76 | 506 | 3.16e-128 | 380 |
MS.gene020465.t1 | AT4G21910 | 46.420 | 433 | 229 | 3 | 1 | 432 | 78 | 508 | 4.46e-128 | 380 |
MS.gene020465.t1 | AT4G21910 | 46.420 | 433 | 229 | 3 | 1 | 432 | 78 | 508 | 4.46e-128 | 380 |
MS.gene020465.t1 | AT3G03620 | 44.186 | 430 | 238 | 2 | 3 | 432 | 60 | 487 | 4.76e-125 | 372 |
MS.gene020465.t1 | AT3G03620 | 44.186 | 430 | 238 | 2 | 3 | 432 | 60 | 487 | 4.76e-125 | 372 |
MS.gene020465.t1 | AT1G61890 | 46.875 | 384 | 203 | 1 | 1 | 383 | 68 | 451 | 2.07e-123 | 367 |
MS.gene020465.t1 | AT4G21903 | 45.688 | 429 | 226 | 4 | 1 | 424 | 74 | 500 | 8.03e-123 | 367 |
MS.gene020465.t1 | AT1G23300 | 43.607 | 438 | 245 | 2 | 1 | 437 | 65 | 501 | 3.44e-122 | 365 |
MS.gene020465.t1 | AT3G26590 | 46.770 | 387 | 205 | 1 | 38 | 424 | 1 | 386 | 3.70e-122 | 361 |
MS.gene020465.t1 | AT5G17700 | 43.721 | 430 | 241 | 1 | 3 | 432 | 57 | 485 | 5.84e-122 | 364 |
MS.gene020465.t1 | AT5G17700 | 43.721 | 430 | 241 | 1 | 3 | 432 | 57 | 485 | 5.84e-122 | 364 |
MS.gene020465.t1 | AT4G25640 | 50.923 | 379 | 185 | 1 | 4 | 382 | 58 | 435 | 1.74e-121 | 362 |
MS.gene020465.t1 | AT4G21903 | 46.819 | 393 | 207 | 2 | 38 | 429 | 1 | 392 | 2.56e-120 | 356 |
MS.gene020465.t1 | AT3G59030 | 44.804 | 433 | 234 | 5 | 1 | 431 | 72 | 501 | 6.69e-118 | 354 |
MS.gene020465.t1 | AT1G33110 | 51.585 | 347 | 168 | 0 | 1 | 347 | 57 | 403 | 3.49e-116 | 346 |
MS.gene020465.t1 | AT5G17700 | 42.319 | 345 | 199 | 0 | 3 | 347 | 57 | 401 | 5.22e-91 | 281 |
MS.gene020465.t1 | AT3G59030 | 43.064 | 346 | 194 | 3 | 1 | 344 | 72 | 416 | 3.24e-87 | 272 |
MS.gene020465.t1 | AT5G52450 | 37.868 | 441 | 259 | 7 | 1 | 432 | 47 | 481 | 3.36e-80 | 256 |
MS.gene020465.t1 | AT1G71140 | 35.545 | 422 | 270 | 2 | 1 | 421 | 47 | 467 | 8.94e-80 | 255 |
MS.gene020465.t1 | AT1G66780 | 34.360 | 422 | 275 | 2 | 1 | 421 | 56 | 476 | 1.50e-74 | 241 |
MS.gene020465.t1 | AT1G73700 | 36.384 | 437 | 270 | 5 | 1 | 434 | 45 | 476 | 1.89e-74 | 241 |
MS.gene020465.t1 | AT2G34360 | 35.814 | 430 | 266 | 6 | 1 | 428 | 48 | 469 | 2.28e-74 | 241 |
MS.gene020465.t1 | AT2G04040 | 34.597 | 422 | 274 | 2 | 1 | 421 | 48 | 468 | 2.68e-74 | 240 |
MS.gene020465.t1 | AT1G64820 | 32.494 | 437 | 292 | 3 | 1 | 435 | 50 | 485 | 1.38e-73 | 239 |
MS.gene020465.t1 | AT1G15160 | 33.636 | 440 | 282 | 6 | 1 | 437 | 52 | 484 | 3.00e-73 | 238 |
MS.gene020465.t1 | AT1G15150 | 32.955 | 440 | 285 | 6 | 1 | 437 | 52 | 484 | 2.57e-72 | 236 |
MS.gene020465.t1 | AT2G04070 | 33.412 | 422 | 279 | 2 | 1 | 421 | 48 | 468 | 6.21e-72 | 234 |
MS.gene020465.t1 | AT3G23560 | 35.233 | 386 | 249 | 1 | 8 | 392 | 67 | 452 | 1.32e-71 | 233 |
MS.gene020465.t1 | AT2G04080 | 31.991 | 422 | 285 | 2 | 1 | 421 | 48 | 468 | 1.47e-71 | 233 |
MS.gene020465.t1 | AT1G15170 | 33.962 | 424 | 274 | 5 | 1 | 421 | 55 | 475 | 3.57e-71 | 233 |
MS.gene020465.t1 | AT2G04050 | 33.649 | 422 | 278 | 2 | 1 | 421 | 48 | 468 | 5.59e-71 | 232 |
MS.gene020465.t1 | AT3G23550 | 35.567 | 388 | 245 | 3 | 8 | 392 | 59 | 444 | 1.31e-70 | 231 |
MS.gene020465.t1 | AT1G66760 | 31.494 | 435 | 296 | 2 | 1 | 434 | 49 | 482 | 2.83e-67 | 222 |
MS.gene020465.t1 | AT2G04080 | 31.010 | 416 | 285 | 2 | 1 | 415 | 48 | 462 | 3.52e-66 | 219 |
MS.gene020465.t1 | AT2G34360 | 32.634 | 429 | 239 | 3 | 1 | 428 | 48 | 427 | 2.15e-63 | 211 |
MS.gene020465.t1 | AT2G04090 | 31.754 | 422 | 286 | 2 | 1 | 421 | 51 | 471 | 2.94e-63 | 212 |
MS.gene020465.t1 | AT1G66760 | 32.099 | 405 | 273 | 2 | 10 | 413 | 58 | 461 | 7.17e-63 | 210 |
MS.gene020465.t1 | AT2G04100 | 31.754 | 422 | 286 | 2 | 1 | 421 | 51 | 471 | 1.03e-62 | 210 |
MS.gene020465.t1 | AT1G15170 | 33.708 | 356 | 230 | 5 | 69 | 421 | 4 | 356 | 3.77e-60 | 200 |
MS.gene020465.t1 | AT1G15180 | 32.235 | 425 | 280 | 5 | 1 | 421 | 56 | 476 | 7.82e-60 | 202 |
MS.gene020465.t1 | AT2G04100 | 31.159 | 414 | 283 | 2 | 1 | 413 | 51 | 463 | 2.02e-58 | 199 |
MS.gene020465.t1 | AT1G15150 | 33.523 | 352 | 224 | 6 | 89 | 437 | 24 | 368 | 3.10e-58 | 196 |
MS.gene020465.t1 | AT3G23560 | 34.615 | 338 | 220 | 1 | 8 | 344 | 67 | 404 | 5.55e-58 | 196 |
MS.gene020465.t1 | AT1G71870 | 29.195 | 435 | 286 | 4 | 3 | 417 | 47 | 479 | 7.90e-49 | 174 |
MS.gene020465.t1 | AT1G66760 | 31.437 | 334 | 227 | 2 | 81 | 413 | 1 | 333 | 1.78e-47 | 166 |
MS.gene020465.t1 | AT4G29140 | 29.147 | 422 | 291 | 5 | 2 | 419 | 78 | 495 | 2.63e-46 | 167 |
MS.gene020465.t1 | AT1G58340 | 26.047 | 430 | 312 | 4 | 3 | 429 | 81 | 507 | 8.24e-43 | 158 |
MS.gene020465.t1 | AT1G66760 | 30.060 | 336 | 234 | 1 | 10 | 344 | 58 | 393 | 3.71e-42 | 153 |
MS.gene020465.t1 | AT2G38510 | 24.941 | 425 | 306 | 6 | 2 | 419 | 28 | 446 | 5.37e-42 | 155 |
MS.gene020465.t1 | AT5G19700 | 25.891 | 421 | 306 | 4 | 2 | 419 | 58 | 475 | 4.18e-38 | 145 |
MS.gene020465.t1 | AT5G49130 | 25.167 | 449 | 316 | 5 | 2 | 433 | 48 | 493 | 4.19e-35 | 136 |
MS.gene020465.t1 | AT5G52050 | 25.740 | 439 | 316 | 4 | 4 | 434 | 59 | 495 | 7.92e-35 | 135 |
MS.gene020465.t1 | AT4G23030 | 25.747 | 435 | 314 | 4 | 2 | 431 | 54 | 484 | 1.43e-33 | 132 |
MS.gene020465.t1 | AT1G15180 | 29.389 | 262 | 180 | 2 | 86 | 344 | 21 | 280 | 3.55e-32 | 127 |
MS.gene020465.t1 | AT4G22790 | 27.230 | 426 | 288 | 6 | 5 | 418 | 55 | 470 | 6.54e-27 | 113 |
MS.gene020465.t1 | AT2G04066 | 38.400 | 125 | 76 | 1 | 297 | 421 | 40 | 163 | 5.84e-22 | 92.8 |
Find 120 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGATATTTGTTTGGGATTT+TGG | 0.036228 | 3.3:-82268463 | MS.gene020465:CDS |
GGATGTTTCTTGGTGGATTT+TGG | 0.191802 | 3.3:-82268416 | MS.gene020465:CDS |
ACACTTTGTGGGCAAGCTTT+TGG | 0.208681 | 3.3:-82268784 | MS.gene020465:CDS |
CTATTGCTTTGGATGTTTCT+TGG | 0.215071 | 3.3:-82268426 | MS.gene020465:CDS |
ATTCCCCTTGCTTTCTTTGC+TGG | 0.220477 | 3.3:-82264649 | MS.gene020465:CDS |
ACTCCCACTTGGAATTCTTA+TGG | 0.241907 | 3.3:-82261261 | MS.gene020465:CDS |
ATATATGGTGACAGGGTATA+TGG | 0.249979 | 3.3:-82261152 | MS.gene020465:intron |
GTCATCGTTGGCTTCAATTT+CGG | 0.260264 | 3.3:-82269803 | MS.gene020465:CDS |
ATAGGATGCTACTATCTAAT+TGG | 0.267112 | 3.3:-82261284 | MS.gene020465:CDS |
TGTCATTGCTTGGGTTTCTT+TGG | 0.269194 | 3.3:-82268521 | MS.gene020465:CDS |
GGAGTGGTGTTGTGGCTATC+TGG | 0.286325 | 3.3:-82268618 | MS.gene020465:CDS |
ATATGGGGTGGGATGATATT+TGG | 0.300145 | 3.3:-82261135 | MS.gene020465:CDS |
ACTCCAATTCTCAAACTTCT+AGG | 0.312888 | 3.3:-82268664 | MS.gene020465:CDS |
GTTGGCTGTTGATATTTGTT+TGG | 0.312913 | 3.3:-82268471 | MS.gene020465:CDS |
CTTGCTTTCTTTGCTGGTAC+CGG | 0.329391 | 3.3:-82264643 | MS.gene020465:CDS |
TTGGGTTTCTTTGGTTGGTT+TGG | 0.332587 | 3.3:-82268512 | MS.gene020465:CDS |
TATTGGTGCTGCTATTGCTT+TGG | 0.334076 | 3.3:-82268437 | MS.gene020465:CDS |
CTGTTGATGCCTTGTCTGTA+TGG | 0.336525 | 3.3:-82264986 | MS.gene020465:intron |
TTGCTTCTGGGGTCATGCTC+TGG | 0.340194 | 3.3:-82268288 | MS.gene020465:intron |
CTCCCACTTGGAATTCTTAT+GGG | 0.340334 | 3.3:-82261260 | MS.gene020465:CDS |
GTTTAGAGAACTGGTATTAC+AGG | 0.340586 | 3.3:-82265052 | MS.gene020465:CDS |
GGAGTGGCAAAGATATAAAA+TGG | 0.361645 | 3.3:+82268682 | None:intergenic |
TCTGGAGTAGCTGTTGGTTC+AGG | 0.363549 | 3.3:-82261335 | MS.gene020465:CDS |
GACGGTATTGGCGATGGAAA+TGG | 0.367692 | 3.3:+82269823 | None:intergenic |
TTGGCTGTTGATATTTGTTT+GGG | 0.375188 | 3.3:-82268470 | MS.gene020465:CDS |
GAATATACCTACAAAGATCT+TGG | 0.380673 | 3.3:-82268738 | MS.gene020465:CDS |
CAAAACTGGTGTCATTGCTT+GGG | 0.380836 | 3.3:-82268530 | MS.gene020465:CDS |
GGTTTCTTTGGTTGGTTTGG+TGG | 0.387750 | 3.3:-82268509 | MS.gene020465:CDS |
TGTCCTAGAAGTTTGAGAAT+TGG | 0.390355 | 3.3:+82268661 | None:intergenic |
ATTTGTGCAGTTTAGAGAAC+TGG | 0.397561 | 3.3:-82265061 | MS.gene020465:intron |
CTATGATAAGTATCAACGTT+TGG | 0.399801 | 3.3:+82261100 | None:intergenic |
GTCGTTACTCAAGCCTTTGC+CGG | 0.401493 | 3.3:-82269872 | MS.gene020465:CDS |
TCAAAACTGGTGTCATTGCT+TGG | 0.405427 | 3.3:-82268531 | MS.gene020465:CDS |
GAACAATCCAAGATCTTTGT+AGG | 0.405941 | 3.3:+82268731 | None:intergenic |
CTACAATGCCAGCTCAAAAC+TGG | 0.406044 | 3.3:-82268544 | MS.gene020465:CDS |
GTAATCTGCAGTTGGTCATC+AGG | 0.407598 | 3.3:+82260898 | None:intergenic |
AAATGTATGCAATTTGTCTA+TGG | 0.412989 | 3.3:+82261450 | None:intergenic |
CTCCACTCTGCCACGTCATC+AGG | 0.413838 | 3.3:+82268637 | None:intergenic |
AACGAACTAGGAGCAGGAAA+AGG | 0.418989 | 3.3:-82261557 | MS.gene020465:CDS |
CACTTGGAATTCTTATGGGA+TGG | 0.423469 | 3.3:-82261256 | MS.gene020465:CDS |
GGGTGTCCTTTAACTTGGAC+TGG | 0.426652 | 3.3:-82268361 | MS.gene020465:CDS |
GCAAAGAGGCATAACATGTT+AGG | 0.432048 | 3.3:-82268760 | MS.gene020465:CDS |
GAAGCCAACGATGACGGTAT+TGG | 0.432665 | 3.3:+82269811 | None:intergenic |
TATATGGTGACAGGGTATAT+GGG | 0.437897 | 3.3:-82261151 | MS.gene020465:intron |
CATTTCAGTTTCCTCTTCAG+AGG | 0.442200 | 3.3:-82268570 | MS.gene020465:CDS |
GTGGTGGGTGTCCTTTAACT+TGG | 0.442736 | 3.3:-82268366 | MS.gene020465:CDS |
TAGTAACAGCACGATGTGAT+TGG | 0.443976 | 3.3:-82261080 | MS.gene020465:CDS |
AGTGTTCAACCTGTTCTCTC+TGG | 0.444203 | 3.3:-82261353 | MS.gene020465:CDS |
GTGGCACAATCAACAGTGAT+TGG | 0.445225 | 3.3:-82261503 | MS.gene020465:CDS |
ATTGCTTGGGTTTCTTTGGT+TGG | 0.447936 | 3.3:-82268517 | MS.gene020465:CDS |
TTTGTAGCATATGTAAATAT+AGG | 0.456650 | 3.3:-82261302 | MS.gene020465:CDS |
TTGCTTTCTTTGCTGGTACC+GGG | 0.457472 | 3.3:-82264642 | MS.gene020465:intron |
CAACAGTCGCATTCTCCAAC+TGG | 0.459932 | 3.3:+82265009 | None:intergenic |
ATGGGATGGGTCTTTAACAC+TGG | 0.461048 | 3.3:-82261242 | MS.gene020465:CDS |
ATGTTGGCTTATACTGTTTG+TGG | 0.461216 | 3.3:-82268385 | MS.gene020465:CDS |
TTGCTTTGGATGTTTCTTGG+TGG | 0.464242 | 3.3:-82268423 | MS.gene020465:CDS |
GAAATCCCAAAGACCAGAAA+AGG | 0.470504 | 3.3:+82268324 | None:intergenic |
AGCTTCAAGCACAGGAGGGC+TGG | 0.473068 | 3.3:+82261421 | None:intergenic |
GTTCTCTCTGGAGTAGCTGT+TGG | 0.473160 | 3.3:-82261341 | MS.gene020465:CDS |
ACTTGGAATTCTTATGGGAT+GGG | 0.474790 | 3.3:-82261255 | MS.gene020465:CDS |
GTCGCCAAGGTGACCGGCAA+AGG | 0.484625 | 3.3:+82269859 | None:intergenic |
AGTAACAGCACGATGTGATT+GGG | 0.485833 | 3.3:-82261079 | MS.gene020465:CDS |
TTGAACGTCGCCAAGGTGAC+CGG | 0.497383 | 3.3:+82269853 | None:intergenic |
ACGAACTAGGAGCAGGAAAA+GGG | 0.501489 | 3.3:-82261556 | MS.gene020465:CDS |
GTTGGGGATGGCAAGCGCAT+TGG | 0.509792 | 3.3:-82268809 | MS.gene020465:CDS |
AGCGCATTGGAGACACTTTG+TGG | 0.515277 | 3.3:-82268796 | MS.gene020465:CDS |
TGGCACAATCAACAGTGATT+GGG | 0.523006 | 3.3:-82261502 | MS.gene020465:CDS |
TTGGCTTATACTGTTTGTGG+TGG | 0.523071 | 3.3:-82268382 | MS.gene020465:CDS |
TAACGATATGTCAATCCTCT+TGG | 0.525832 | 3.3:-82261396 | MS.gene020465:CDS |
TGGTAAATGTGGTACTTAGT+TGG | 0.526797 | 3.3:-82268489 | MS.gene020465:CDS |
TTTGTACGTGCAGGCAGAGA+AGG | 0.530592 | 3.3:-82260956 | MS.gene020465:intron |
AACGATGACGGTATTGGCGA+TGG | 0.531501 | 3.3:+82269817 | None:intergenic |
GTAAGAGTAGCAAACGAACT+AGG | 0.533785 | 3.3:-82261569 | MS.gene020465:CDS |
ATCGCCAATACCGTCATCGT+TGG | 0.536625 | 3.3:-82269815 | MS.gene020465:CDS |
ACAGCTACTCCAGAGAGAAC+AGG | 0.536881 | 3.3:+82261344 | None:intergenic |
TATCTAATTGGACTCCCACT+TGG | 0.538745 | 3.3:-82261272 | MS.gene020465:CDS |
GCGCATTGGAGACACTTTGT+GGG | 0.539459 | 3.3:-82268795 | MS.gene020465:CDS |
CAAGCCTTTGCCGGTCACCT+TGG | 0.550234 | 3.3:-82269863 | MS.gene020465:CDS |
GGCTTGAGTAACGACGTTCA+TGG | 0.551750 | 3.3:+82269880 | None:intergenic |
GAAATTGAAGCCAACGATGA+CGG | 0.556142 | 3.3:+82269805 | None:intergenic |
TGGCTTATACTGTTTGTGGT+GGG | 0.557234 | 3.3:-82268381 | MS.gene020465:CDS |
TCGTTAACAGCTTCAAGCAC+AGG | 0.558064 | 3.3:+82261413 | None:intergenic |
GGTTGGTTTGGTGGTAAATG+TGG | 0.560285 | 3.3:-82268500 | MS.gene020465:CDS |
ATATGGTGACAGGGTATATG+GGG | 0.562914 | 3.3:-82261150 | MS.gene020465:intron |
ACGTGCAGGCAGAGAAGGCT+AGG | 0.568343 | 3.3:-82260951 | MS.gene020465:intron |
GCTACTTATGACTGGCCAGT+TGG | 0.573383 | 3.3:-82265024 | MS.gene020465:CDS |
GTAGCAAACGAACTAGGAGC+AGG | 0.574569 | 3.3:-82261563 | MS.gene020465:CDS |
AGGATACTGCTACTTATGAC+TGG | 0.577226 | 3.3:-82265032 | MS.gene020465:CDS |
CGGTACCAGCAAAGAAAGCA+AGG | 0.577545 | 3.3:+82264644 | None:intergenic |
TGTAAAATCCAAATATTACT+CGG | 0.578723 | 3.3:+82260876 | None:intergenic |
TATGATGGACTAGTTGGGGA+TGG | 0.580112 | 3.3:-82268821 | MS.gene020465:intron |
TGGTGACAGGGTATATGGGG+TGG | 0.581171 | 3.3:-82261147 | MS.gene020465:intron |
GCAGTATGACTATCAATGGG+TGG | 0.584575 | 3.3:-82264681 | MS.gene020465:intron |
CAGTATGACTATCAATGGGT+GGG | 0.588552 | 3.3:-82264680 | MS.gene020465:CDS |
ACGATGTGATTGGGAAAATG+AGG | 0.589594 | 3.3:-82261070 | MS.gene020465:intron |
ATTACTCGGTAATCTGCAGT+TGG | 0.597803 | 3.3:+82260890 | None:intergenic |
TTTGCAGTATGACTATCAAT+GGG | 0.603019 | 3.3:-82264684 | MS.gene020465:intron |
GGCAGAGTGGAGTGGTGTTG+TGG | 0.603381 | 3.3:-82268626 | MS.gene020465:CDS |
GAGTAGCTGTTGGTTCAGGA+TGG | 0.606754 | 3.3:-82261331 | MS.gene020465:CDS |
TTCAAGCACAGGAGGGCTGG+TGG | 0.608111 | 3.3:+82261424 | None:intergenic |
GGTGACAGGGTATATGGGGT+GGG | 0.609014 | 3.3:-82261146 | MS.gene020465:intron |
TTAACAGCTTCAAGCACAGG+AGG | 0.611884 | 3.3:+82261416 | None:intergenic |
ATTTGCAATGCAAGTATCAG+TGG | 0.612623 | 3.3:-82261522 | MS.gene020465:CDS |
AATGCAAAACTGAAATGCAA+AGG | 0.612853 | 3.3:+82268589 | None:intergenic |
GGTACCAGCAAAGAAAGCAA+GGG | 0.614066 | 3.3:+82264645 | None:intergenic |
CATTGTAGAAACCTCTGAAG+AGG | 0.618043 | 3.3:+82268559 | None:intergenic |
TGGGGTGGGATGATATTTGG+TGG | 0.622289 | 3.3:-82261132 | MS.gene020465:CDS |
TAGAAGTTTGAGAATTGGAG+TGG | 0.625597 | 3.3:+82268666 | None:intergenic |
CTAGGTCACGTGTAAACAAG+TGG | 0.641820 | 3.3:-82260933 | MS.gene020465:CDS |
AAGCGAGTTGAACGTCGCCA+AGG | 0.645792 | 3.3:+82269846 | None:intergenic |
GCAATAACAGAAAACAACAA+AGG | 0.657750 | 3.3:+82268704 | None:intergenic |
GAAGAATTGTGACAGCCAAG+AGG | 0.658484 | 3.3:+82261381 | None:intergenic |
GTACCAGCAAAGAAAGCAAG+GGG | 0.663651 | 3.3:+82264646 | None:intergenic |
ATCCCATAAGAATTCCAAGT+GGG | 0.671051 | 3.3:+82261258 | None:intergenic |
TAACAGCTTCAAGCACAGGA+GGG | 0.678642 | 3.3:+82261417 | None:intergenic |
AACCTGATGACGTGGCAGAG+TGG | 0.680453 | 3.3:-82268639 | MS.gene020465:CDS |
TCTAGGACAACCTGATGACG+TGG | 0.684780 | 3.3:-82268647 | MS.gene020465:CDS |
GATGACGTGGCAGAGTGGAG+TGG | 0.707488 | 3.3:-82268634 | MS.gene020465:CDS |
AATAACTTACCATACAGACA+AGG | 0.728308 | 3.3:+82264977 | None:intergenic |
CATCCCATAAGAATTCCAAG+TGG | 0.794126 | 3.3:+82261257 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 82260891 | 82269900 | 82260891 | ID=MS.gene020465 |
chr3.3 | mRNA | 82260891 | 82269900 | 82260891 | ID=MS.gene020465.t1;Parent=MS.gene020465 |
chr3.3 | exon | 82269796 | 82269900 | 82269796 | ID=MS.gene020465.t1.exon1;Parent=MS.gene020465.t1 |
chr3.3 | CDS | 82269796 | 82269900 | 82269796 | ID=cds.MS.gene020465.t1;Parent=MS.gene020465.t1 |
chr3.3 | exon | 82268289 | 82268830 | 82268289 | ID=MS.gene020465.t1.exon2;Parent=MS.gene020465.t1 |
chr3.3 | CDS | 82268289 | 82268830 | 82268289 | ID=cds.MS.gene020465.t1;Parent=MS.gene020465.t1 |
chr3.3 | exon | 82264987 | 82265073 | 82264987 | ID=MS.gene020465.t1.exon3;Parent=MS.gene020465.t1 |
chr3.3 | CDS | 82264987 | 82265073 | 82264987 | ID=cds.MS.gene020465.t1;Parent=MS.gene020465.t1 |
chr3.3 | exon | 82264643 | 82264699 | 82264643 | ID=MS.gene020465.t1.exon4;Parent=MS.gene020465.t1 |
chr3.3 | CDS | 82264643 | 82264699 | 82264643 | ID=cds.MS.gene020465.t1;Parent=MS.gene020465.t1 |
chr3.3 | exon | 82261235 | 82261592 | 82261235 | ID=MS.gene020465.t1.exon5;Parent=MS.gene020465.t1 |
chr3.3 | CDS | 82261235 | 82261592 | 82261235 | ID=cds.MS.gene020465.t1;Parent=MS.gene020465.t1 |
chr3.3 | exon | 82261071 | 82261160 | 82261071 | ID=MS.gene020465.t1.exon6;Parent=MS.gene020465.t1 |
chr3.3 | CDS | 82261071 | 82261160 | 82261071 | ID=cds.MS.gene020465.t1;Parent=MS.gene020465.t1 |
chr3.3 | exon | 82260891 | 82260965 | 82260891 | ID=MS.gene020465.t1.exon7;Parent=MS.gene020465.t1 |
chr3.3 | CDS | 82260891 | 82260965 | 82260891 | ID=cds.MS.gene020465.t1;Parent=MS.gene020465.t1 |
Gene Sequence |
Protein sequence |