AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20366

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20366.t1 MTR_5g011340 95.789 380 16 0 187 566 374 753 0.0 746
MS.gene20366.t1 MTR_5g011340 94.792 192 6 1 1 188 1 192 1.50e-125 386
MS.gene20366.t1 MTR_5g011310 94.211 380 22 0 187 566 377 756 0.0 733
MS.gene20366.t1 MTR_5g011310 81.122 196 28 3 1 188 1 195 1.01e-106 337
MS.gene20366.t1 MTR_5g011320 93.158 380 25 1 187 566 370 748 0.0 721
MS.gene20366.t1 MTR_5g011320 95.745 188 8 0 1 188 1 188 3.50e-126 387
MS.gene20366.t1 MTR_5g011190 87.863 379 46 0 187 565 377 755 0.0 684
MS.gene20366.t1 MTR_5g011190 80.612 196 29 3 1 188 1 195 1.32e-104 332
MS.gene20366.t1 MTR_5g011370 87.105 380 49 0 187 566 397 776 0.0 681
MS.gene20366.t1 MTR_5g011370 80.612 196 29 3 1 188 21 215 1.22e-104 332
MS.gene20366.t1 MTR_5g011270 67.663 368 119 0 199 566 387 754 6.73e-178 521
MS.gene20366.t1 MTR_5g011270 53.589 209 78 6 1 195 3 206 9.53e-62 217
MS.gene20366.t1 MTR_5g011260 67.575 367 119 0 199 565 387 753 4.77e-177 519
MS.gene20366.t1 MTR_5g011260 55.172 203 70 7 1 188 3 199 9.63e-62 217
MS.gene20366.t1 MTR_5g011280 68.207 368 116 1 199 565 390 757 2.39e-174 512
MS.gene20366.t1 MTR_5g011280 59.358 187 64 5 21 203 33 211 2.18e-56 202
MS.gene20366.t1 MTR_4g102400 60.638 376 142 4 193 565 382 754 3.65e-149 447
MS.gene20366.t1 MTR_4g102400 57.143 161 63 4 38 193 40 199 2.38e-51 188
MS.gene20366.t1 MTR_7g098630 45.897 390 189 9 192 564 377 761 1.48e-98 318
MS.gene20366.t1 MTR_7g098630 41.916 167 84 5 35 191 24 187 1.10e-30 127
MS.gene20366.t1 MTR_4g125180 46.348 397 198 8 178 562 357 750 5.72e-96 309
MS.gene20366.t1 MTR_4g125180 31.053 190 109 5 6 191 8 179 8.27e-19 90.9
MS.gene20366.t1 MTR_4g073540 46.615 384 182 9 198 563 389 767 6.19e-94 304
MS.gene20366.t1 MTR_4g073540 36.765 136 80 3 60 191 50 183 2.09e-21 99.0
MS.gene20366.t1 MTR_7g075900 45.144 381 190 7 200 566 399 774 2.80e-93 302
MS.gene20366.t1 MTR_7g075900 36.946 203 95 6 8 188 6 197 1.16e-25 112
MS.gene20366.t1 MTR_2g042130 44.909 383 187 8 196 562 397 771 2.03e-92 300
MS.gene20366.t1 MTR_2g042130 38.583 127 69 2 74 191 77 203 7.37e-22 100
MS.gene20366.t1 MTR_5g016120 45.383 379 189 8 201 566 390 763 1.56e-89 292
MS.gene20366.t1 MTR_5g016120 36.410 195 107 7 2 188 1 186 2.89e-27 117
MS.gene20366.t1 MTR_8g021130 44.094 381 190 11 201 563 399 774 3.34e-87 286
MS.gene20366.t1 MTR_8g021130 33.533 167 98 5 36 191 36 200 3.08e-19 92.0
MS.gene20366.t1 MTR_8g022870 44.301 386 195 7 200 566 394 778 9.51e-87 285
MS.gene20366.t1 MTR_8g022870 37.037 162 92 5 37 191 29 187 2.07e-22 102
MS.gene20366.t1 MTR_0047s0120 44.010 384 197 8 196 566 381 759 7.22e-86 282
MS.gene20366.t1 MTR_0047s0120 34.807 181 106 6 12 188 10 182 1.39e-24 108
MS.gene20366.t1 MTR_4g095360 42.416 389 200 10 192 563 373 754 3.39e-85 280
MS.gene20366.t1 MTR_4g095360 42.138 159 84 4 37 191 30 184 5.50e-31 128
MS.gene20366.t1 MTR_3g102810 42.674 389 199 7 193 562 370 753 4.25e-83 275
MS.gene20366.t1 MTR_3g102810 38.251 183 102 5 13 191 3 178 6.79e-26 112
MS.gene20366.t1 MTR_1g018510 41.818 385 198 6 200 562 344 724 1.38e-81 270
MS.gene20366.t1 MTR_1g018510 37.589 141 82 3 55 191 7 145 9.08e-21 97.1
MS.gene20366.t1 MTR_1g102350 42.368 380 202 5 198 565 404 778 3.65e-81 270
MS.gene20366.t1 MTR_1g102350 32.536 209 118 6 1 191 1 204 7.02e-25 109
MS.gene20366.t1 MTR_3g082200 40.318 377 208 6 196 563 263 631 5.45e-79 261
MS.gene20366.t1 MTR_3g082200 40.318 377 208 6 196 563 278 646 1.03e-78 261
MS.gene20366.t1 MTR_3g082200 40.318 377 208 6 196 563 401 769 4.11e-78 262
MS.gene20366.t1 MTR_3g082200 31.351 185 110 5 35 203 28 211 3.76e-19 92.0
MS.gene20366.t1 MTR_4g103450 41.333 375 206 6 200 565 376 745 3.27e-77 259
MS.gene20366.t1 MTR_4g103450 36.842 171 93 3 36 191 1 171 4.81e-21 97.8
MS.gene20366.t1 MTR_4g103495 43.316 374 196 7 200 563 256 623 4.91e-77 256
MS.gene20366.t1 MTR_5g055920 41.114 377 204 7 200 565 299 668 7.99e-76 253
MS.gene20366.t1 MTR_8g083220 41.370 365 206 4 201 563 416 774 1.76e-75 255
MS.gene20366.t1 MTR_8g083220 36.735 147 84 3 54 191 57 203 5.47e-21 97.8
MS.gene20366.t1 MTR_5g025010 42.162 370 198 7 199 563 359 717 3.40e-75 253
MS.gene20366.t1 MTR_5g025010 35.294 170 94 5 75 235 37 199 2.07e-19 92.8
MS.gene20366.t1 MTR_5g025010 42.162 370 198 7 199 563 391 749 7.00e-75 253
MS.gene20366.t1 MTR_5g025010 35.294 170 94 5 75 235 69 231 1.82e-19 92.8
MS.gene20366.t1 MTR_4g103480 40.267 375 210 6 200 565 419 788 2.25e-74 252
MS.gene20366.t1 MTR_4g103480 35.429 175 98 3 32 191 40 214 2.92e-20 95.5
MS.gene20366.t1 MTR_4g103490 40.691 376 207 7 200 565 416 785 1.86e-73 249
MS.gene20366.t1 MTR_4g103490 36.413 184 103 4 62 236 64 242 1.23e-20 96.7
MS.gene20366.t1 MTR_4g103430 41.333 375 202 7 200 563 401 768 1.22e-72 247
MS.gene20366.t1 MTR_4g103430 31.797 217 125 7 62 268 60 263 5.49e-19 91.3
MS.gene20366.t1 MTR_4g134320 38.400 375 215 5 196 563 400 765 1.34e-72 247
MS.gene20366.t1 MTR_4g134320 34.524 168 97 3 37 191 29 196 6.01e-21 97.4
MS.gene20366.t1 MTR_8g072440 39.402 368 209 6 199 563 354 710 4.59e-72 244
MS.gene20366.t1 MTR_8g072440 41.463 123 60 3 75 188 32 151 5.66e-20 94.4
MS.gene20366.t1 MTR_8g072440 39.402 368 209 6 199 563 396 752 7.47e-72 244
MS.gene20366.t1 MTR_8g072440 41.463 123 60 3 75 188 74 193 5.10e-20 94.7
MS.gene20366.t1 MTR_5g096750 40.533 375 212 7 195 566 401 767 1.17e-69 239
MS.gene20366.t1 MTR_5g096750 31.609 174 100 4 37 191 32 205 7.55e-18 87.8
MS.gene20366.t1 MTR_7g081420 40.967 393 202 14 195 566 404 787 2.35e-69 238
MS.gene20366.t1 MTR_7g081420 34.078 179 103 6 71 237 73 248 7.89e-14 75.1
MS.gene20366.t1 MTR_7g098070 37.931 377 214 6 196 563 396 761 3.60e-69 238
MS.gene20366.t1 MTR_7g098070 35.119 168 95 4 37 191 27 193 1.83e-20 95.9
MS.gene20366.t1 MTR_8g042670 37.903 372 216 5 201 563 268 633 6.18e-69 234
MS.gene20366.t1 MTR_8g042670 37.903 372 216 5 201 563 392 757 4.98e-68 234
MS.gene20366.t1 MTR_8g042670 35.821 134 78 3 62 188 61 193 6.28e-16 81.6
MS.gene20366.t1 MTR_4g103495 44.720 322 165 5 200 512 405 722 1.35e-67 233
MS.gene20366.t1 MTR_4g103495 32.955 176 101 4 32 191 24 198 5.22e-18 88.2
MS.gene20366.t1 MTR_8g024380 41.935 341 174 7 240 563 425 758 1.24e-66 231
MS.gene20366.t1 MTR_8g024380 33.146 178 100 3 38 198 30 205 3.66e-26 114
MS.gene20366.t1 MTR_7g081580 40.201 398 200 14 191 563 399 783 1.27e-66 231
MS.gene20366.t1 MTR_7g081580 32.990 194 114 6 28 205 23 216 1.68e-13 73.9
MS.gene20366.t1 MTR_3g061110 37.662 385 218 9 192 563 377 752 6.40e-66 229
MS.gene20366.t1 MTR_3g061110 32.973 185 110 3 37 208 28 211 8.86e-19 90.9
MS.gene20366.t1 MTR_4g103400 38.303 389 220 9 191 563 392 776 2.47e-65 227
MS.gene20366.t1 MTR_4g103400 37.681 138 78 2 62 191 60 197 4.64e-18 88.6
MS.gene20366.t1 MTR_7g081750 39.109 404 206 13 196 566 404 800 3.26e-65 227
MS.gene20366.t1 MTR_7g081750 37.324 142 80 3 71 203 72 213 1.32e-18 90.1
MS.gene20366.t1 MTR_8g042710 37.135 377 215 6 201 563 395 763 4.38e-65 226
MS.gene20366.t1 MTR_8g042710 33.533 167 100 5 38 194 26 191 5.80e-18 88.2
MS.gene20366.t1 MTR_4g053630 37.302 378 215 9 197 563 286 652 4.44e-64 222
MS.gene20366.t1 MTR_4g053630 37.302 378 215 9 197 563 363 729 8.03e-64 223
MS.gene20366.t1 MTR_4g053630 35.714 126 69 4 71 188 38 159 5.62e-13 72.4
MS.gene20366.t1 MTR_8g024390 40.683 322 169 7 259 563 441 757 1.08e-63 223
MS.gene20366.t1 MTR_8g024390 31.250 240 141 7 38 263 29 258 1.29e-25 112
MS.gene20366.t1 MTR_2g018135 38.281 384 213 7 197 566 412 785 1.24e-63 223
MS.gene20366.t1 MTR_2g018135 31.638 177 97 6 34 188 24 198 3.12e-16 82.8
MS.gene20366.t1 MTR_1g078110 41.834 349 173 11 234 563 416 753 1.71e-63 222
MS.gene20366.t1 MTR_1g078110 34.118 170 94 3 38 191 30 197 1.95e-27 117
MS.gene20366.t1 MTR_7g118080 39.733 375 195 9 209 563 392 755 1.15e-62 220
MS.gene20366.t1 MTR_7g118080 32.836 201 113 7 31 213 26 222 1.96e-21 99.0
MS.gene20366.t1 MTR_7g481600 40.409 391 209 12 191 563 399 783 3.35e-62 219
MS.gene20366.t1 MTR_7g481600 32.474 194 115 6 28 205 23 216 9.11e-13 71.6
MS.gene20366.t1 MTR_2g018125 37.565 386 217 7 195 566 411 786 9.45e-62 218
MS.gene20366.t1 MTR_2g018125 30.682 176 101 4 34 188 25 200 3.98e-17 85.5
MS.gene20366.t1 MTR_8g006680 41.389 360 181 12 211 563 386 722 1.06e-61 216
MS.gene20366.t1 MTR_8g006680 35.556 135 75 3 71 199 68 196 7.71e-16 81.3
MS.gene20366.t1 MTR_8g005300 41.389 360 181 12 211 563 386 722 1.06e-61 216
MS.gene20366.t1 MTR_8g005300 35.556 135 75 3 71 199 68 196 7.71e-16 81.3
MS.gene20366.t1 MTR_8g005640 41.389 360 181 12 211 563 386 722 1.06e-61 216
MS.gene20366.t1 MTR_8g005640 35.556 135 75 3 71 199 68 196 7.71e-16 81.3
MS.gene20366.t1 MTR_1g006990 40.710 366 182 12 211 563 391 734 3.25e-61 215
MS.gene20366.t1 MTR_1g006990 31.156 199 117 5 8 200 15 199 1.63e-16 83.6
MS.gene20366.t1 MTR_7g081380 39.173 411 205 15 191 563 403 806 3.84e-61 216
MS.gene20366.t1 MTR_7g081380 34.021 194 111 7 15 191 9 202 4.33e-14 75.9
MS.gene20366.t1 MTR_1g079120 39.875 321 170 7 261 563 445 760 8.58e-61 214
MS.gene20366.t1 MTR_1g079120 36.453 203 109 7 2 191 1 196 5.67e-28 119
MS.gene20366.t1 MTR_6g055570 38.760 387 196 12 192 563 369 729 8.58e-61 214
MS.gene20366.t1 MTR_6g055570 31.138 167 94 2 50 197 30 194 7.07e-17 84.7
MS.gene20366.t1 MTR_7g104200 38.462 390 203 15 192 566 376 743 4.32e-60 213
MS.gene20366.t1 MTR_7g104200 41.600 125 64 3 71 191 68 187 3.84e-20 95.1
MS.gene20366.t1 MTR_7g079310 39.628 323 165 9 261 563 451 763 1.08e-59 212
MS.gene20366.t1 MTR_7g079310 32.367 207 113 7 4 191 1 199 3.85e-22 101
MS.gene20366.t1 MTR_1g007030 40.164 366 184 11 211 563 389 732 1.17e-59 211
MS.gene20366.t1 MTR_1g007030 30.172 232 133 6 6 233 8 214 1.26e-17 87.0
MS.gene20366.t1 MTR_4g053635 37.008 381 209 11 197 563 309 672 2.37e-59 209
MS.gene20366.t1 MTR_4g053635 28.922 204 122 7 89 273 2 201 4.14e-13 72.8
MS.gene20366.t1 MTR_7g081500 39.241 395 203 14 196 566 404 785 2.89e-59 211
MS.gene20366.t1 MTR_7g081500 35.196 179 101 6 71 237 72 247 1.04e-15 80.9
MS.gene20366.t1 MTR_8g024420 37.063 429 211 16 174 563 313 721 2.92e-59 210
MS.gene20366.t1 MTR_8g024420 40.000 145 77 3 57 191 14 158 5.08e-27 116
MS.gene20366.t1 MTR_7g075890 35.248 383 215 11 196 566 538 899 1.19e-58 210
MS.gene20366.t1 MTR_7g075890 38.760 129 62 4 71 191 226 345 6.96e-18 88.2
MS.gene20366.t1 MTR_2g049200 40.615 325 166 8 258 563 439 755 1.44e-58 208
MS.gene20366.t1 MTR_2g049200 37.059 170 89 4 38 191 29 196 2.27e-28 120
MS.gene20366.t1 MTR_3g104930 36.842 380 213 10 199 560 388 758 3.37e-58 207
MS.gene20366.t1 MTR_3g104930 35.821 134 75 3 70 193 60 192 1.11e-15 80.9
MS.gene20366.t1 MTR_8g033150 35.000 380 215 9 196 563 392 751 3.54e-58 207
MS.gene20366.t1 MTR_8g033150 40.945 127 62 4 71 191 80 199 1.54e-19 93.2
MS.gene20366.t1 MTR_8g033150 35.000 380 215 9 196 563 365 724 4.20e-58 207
MS.gene20366.t1 MTR_8g033150 40.945 127 62 4 71 191 53 172 1.72e-19 92.8
MS.gene20366.t1 MTR_1g048110 37.215 395 212 13 180 563 361 730 4.32e-57 204
MS.gene20366.t1 MTR_1g048110 26.744 258 171 5 6 250 8 260 2.79e-16 82.8
MS.gene20366.t1 MTR_5g085690 36.788 386 222 6 196 564 409 789 5.90e-57 204
MS.gene20366.t1 MTR_5g085690 30.876 217 123 5 2 198 1 210 1.82e-18 89.7
MS.gene20366.t1 MTR_6g075370 44.628 242 115 3 296 526 421 654 2.85e-56 201
MS.gene20366.t1 MTR_6g075370 34.946 186 105 5 6 188 9 181 3.84e-21 98.2
MS.gene20366.t1 MTR_7g034380 38.649 370 191 11 211 566 347 694 4.36e-56 201
MS.gene20366.t1 MTR_7g034380 34.646 127 81 1 71 197 30 154 1.83e-17 86.7
MS.gene20366.t1 MTR_8g005710 39.024 369 185 13 211 563 354 698 3.01e-55 198
MS.gene20366.t1 MTR_8g005710 32.576 132 79 2 71 194 30 159 4.13e-13 72.8
MS.gene20366.t1 MTR_8g079900 34.121 381 217 11 196 563 284 643 4.64e-55 197
MS.gene20366.t1 MTR_8g079900 33.793 145 66 7 102 236 3 127 4.65e-12 69.3
MS.gene20366.t1 MTR_8g079900 34.121 381 217 11 196 563 382 741 1.19e-54 197
MS.gene20366.t1 MTR_8g079900 35.795 176 83 7 71 236 70 225 3.76e-20 95.1
MS.gene20366.t1 MTR_8g027260 40.656 305 153 9 273 563 361 651 3.20e-54 195
MS.gene20366.t1 MTR_8g027260 28.636 220 148 4 1 217 1 214 1.01e-16 84.0
MS.gene20366.t1 MTR_7g079300 38.941 321 171 10 261 563 452 765 6.35e-53 193
MS.gene20366.t1 MTR_7g079300 34.783 184 95 6 30 191 22 202 1.27e-22 102
MS.gene20366.t1 MTR_3g114420 36.053 380 218 9 201 563 393 764 3.75e-52 191
MS.gene20366.t1 MTR_3g114420 26.407 231 148 7 6 226 9 227 7.93e-16 81.3
MS.gene20366.t1 MTR_3g010080 38.835 309 167 7 261 558 429 726 7.34e-51 186
MS.gene20366.t1 MTR_3g010080 35.263 190 103 5 6 188 8 184 5.84e-22 100
MS.gene20366.t1 MTR_6g055410 35.938 384 193 12 192 563 369 711 3.65e-49 181
MS.gene20366.t1 MTR_6g055410 28.704 216 113 4 1 197 1 194 3.01e-18 89.0
MS.gene20366.t1 MTR_2g042650 34.555 382 200 11 192 563 301 642 1.18e-48 179
MS.gene20366.t1 MTR_3g464790 35.772 369 216 9 201 560 372 728 2.85e-47 176
MS.gene20366.t1 MTR_8g024370 35.450 378 211 10 209 563 389 756 3.48e-45 171
MS.gene20366.t1 MTR_8g024370 32.090 268 152 8 6 263 7 254 4.15e-29 122
MS.gene20366.t1 MTR_5g011300 75.000 96 24 0 352 447 1 96 4.46e-43 149
MS.gene20366.t1 MTR_4g127480 40.268 298 146 12 289 561 521 811 4.09e-41 159
MS.gene20366.t1 MTR_4g127480 36.719 128 70 4 73 191 88 213 2.20e-17 86.3
MS.gene20366.t1 MTR_2g044630 34.503 342 178 11 234 563 398 705 4.50e-41 158
MS.gene20366.t1 MTR_2g044630 31.492 181 107 3 8 188 15 178 1.65e-15 80.1
MS.gene20366.t1 MTR_4g126230 38.117 223 110 5 282 489 39 248 1.17e-40 148
MS.gene20366.t1 MTR_2g042640 36.765 272 141 7 261 523 362 611 2.36e-37 146
MS.gene20366.t1 MTR_2g042640 32.639 144 92 2 52 192 17 158 9.45e-17 84.0
MS.gene20366.t1 MTR_8g089230 36.678 289 156 11 297 566 568 848 1.21e-36 145
MS.gene20366.t1 MTR_8g089230 34.507 142 82 5 60 191 102 242 2.87e-15 79.7
MS.gene20366.t1 MTR_2g046740 34.843 287 161 8 299 566 562 841 4.36e-36 144
MS.gene20366.t1 MTR_2g046740 39.695 131 67 4 71 191 106 234 5.35e-18 88.2
MS.gene20366.t1 MTR_2g037850 37.793 299 152 10 289 561 521 811 1.01e-35 143
MS.gene20366.t1 MTR_2g037850 38.889 126 66 4 75 191 90 213 5.46e-17 85.1
MS.gene20366.t1 MTR_4g071560 41.784 213 109 4 196 396 323 532 2.16e-35 140
MS.gene20366.t1 MTR_2g070260 40.394 203 108 5 352 551 1 193 5.47e-35 131
MS.gene20366.t1 MTR_3g452290 37.500 248 110 6 325 563 357 568 2.49e-33 134
MS.gene20366.t1 MTR_3g452290 32.353 136 78 3 103 227 4 136 5.48e-13 72.0
MS.gene20366.t1 MTR_3g451220 37.500 248 110 6 325 563 357 568 2.49e-33 134
MS.gene20366.t1 MTR_3g451220 32.353 136 78 3 103 227 4 136 5.48e-13 72.0
MS.gene20366.t1 MTR_4g132620 34.752 282 160 8 299 564 542 815 3.90e-33 135
MS.gene20366.t1 MTR_4g132620 39.062 128 67 4 77 196 94 218 9.47e-17 84.3
MS.gene20366.t1 MTR_4g053665 33.992 253 117 8 318 563 1 210 9.10e-31 119
MS.gene20366.t1 MTR_3g114410 41.026 195 97 4 200 383 393 580 1.06e-30 127
MS.gene20366.t1 MTR_3g114410 30.653 199 118 7 2 188 1 191 1.01e-15 80.9
MS.gene20366.t1 MTR_3g114140 36.187 257 136 7 282 519 174 421 2.08e-30 124
MS.gene20366.t1 MTR_8g042710 40.513 195 101 4 201 384 395 585 3.73e-30 125
MS.gene20366.t1 MTR_8g042710 33.533 167 100 5 38 194 26 191 5.77e-18 88.2
MS.gene20366.t1 MTR_5g044060 47.794 136 58 3 289 413 3 136 2.70e-28 111
MS.gene20366.t1 MTR_7g079295 32.889 225 123 7 30 233 22 239 9.31e-24 105
MS.gene20366.t1 MTR_7g079295 35.065 154 86 5 417 563 363 509 1.93e-16 82.8
MS.gene20366.t1 MTR_5g081130 33.939 165 99 3 405 565 15 173 2.00e-22 95.9
MS.gene20366.t1 MTR_5g011380 82.222 45 8 0 521 565 14 58 4.37e-18 79.3
MS.gene20366.t1 MTR_7g097250 37.333 150 73 3 220 369 48 176 9.13e-18 81.6
MS.gene20366.t1 MTR_7g081660 37.368 190 100 8 382 563 374 552 5.37e-16 81.6
MS.gene20366.t1 MTR_5g081100 32.515 163 76 5 35 192 1 134 1.39e-14 76.6
MS.gene20366.t1 MTR_8g027660 32.461 191 102 6 376 563 80 246 2.80e-14 73.6
MS.gene20366.t1 MTR_3g065240 27.946 297 112 12 177 448 37 256 5.53e-14 72.8
MS.gene20366.t1 MTR_3g114160 34.545 110 72 0 70 179 3 112 3.95e-13 71.6
MS.gene20366.t1 MTR_5g081280 27.500 240 133 10 32 264 17 222 9.21e-13 69.7
MS.gene20366.t1 MTR_8g092940 35.849 106 64 2 69 174 23 124 3.35e-12 67.0
MS.gene20366.t1 MTR_3g005755 72.500 40 11 0 344 383 238 277 1.07e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20366.t1 AT1G04110 46.649 388 185 9 196 566 391 773 5.50e-102 325
MS.gene20366.t1 AT1G04110 33.688 282 151 12 14 266 6 280 1.73e-28 121
MS.gene20366.t1 AT2G05920 45.932 381 189 8 194 562 373 748 2.65e-97 312
MS.gene20366.t1 AT2G05920 36.527 167 96 4 37 199 29 189 1.05e-18 90.5
MS.gene20366.t1 AT5G67360 43.382 408 206 10 175 563 353 754 1.39e-91 297
MS.gene20366.t1 AT5G67360 37.895 190 96 8 8 191 13 186 1.98e-27 117
MS.gene20366.t1 AT3G14240 41.562 397 210 7 191 566 377 772 4.81e-89 291
MS.gene20366.t1 AT3G14240 37.500 160 93 4 37 191 27 184 2.41e-23 105
MS.gene20366.t1 AT4G34980 41.344 387 203 7 196 563 377 758 1.94e-85 281
MS.gene20366.t1 AT4G34980 38.194 144 80 3 57 196 45 183 1.02e-24 109
MS.gene20366.t1 AT5G51750 41.053 380 206 6 199 565 402 776 2.46e-81 271
MS.gene20366.t1 AT5G51750 33.505 194 112 5 12 191 11 201 7.33e-24 106
MS.gene20366.t1 AT3G14067 41.732 381 204 8 200 563 388 767 9.24e-81 269
MS.gene20366.t1 AT3G14067 40.123 162 90 3 35 191 30 189 4.31e-34 138
MS.gene20366.t1 AT1G01900 42.559 383 200 7 200 566 396 774 1.60e-79 266
MS.gene20366.t1 AT1G01900 34.940 166 88 5 37 191 43 199 9.35e-23 103
MS.gene20366.t1 AT2G04160 40.849 377 206 7 197 563 401 770 2.36e-72 246
MS.gene20366.t1 AT2G04160 31.361 169 102 4 37 191 31 199 2.80e-18 89.4
MS.gene20366.t1 AT5G59810 38.441 372 214 7 200 563 410 774 8.26e-70 239
MS.gene20366.t1 AT5G59810 32.335 167 99 3 37 191 41 205 3.60e-18 89.0
MS.gene20366.t1 AT5G45650 39.842 379 204 7 199 563 420 788 9.86e-67 231
MS.gene20366.t1 AT5G45650 28.287 251 130 8 38 250 27 265 4.78e-19 91.7
MS.gene20366.t1 AT5G45650 39.842 379 204 7 199 563 420 788 9.86e-67 231
MS.gene20366.t1 AT5G45650 28.287 251 130 8 38 250 27 265 4.78e-19 91.7
MS.gene20366.t1 AT4G10520 40.278 360 201 7 208 563 395 744 9.89e-65 225
MS.gene20366.t1 AT4G10520 33.465 254 129 9 6 241 8 239 3.36e-24 107
MS.gene20366.t1 AT4G21630 38.718 390 213 9 182 563 382 753 9.74e-64 223
MS.gene20366.t1 AT4G21630 33.831 201 112 5 6 188 8 205 7.28e-23 103
MS.gene20366.t1 AT1G32960 39.503 362 205 7 208 563 412 765 2.19e-62 219
MS.gene20366.t1 AT1G32960 40.491 163 89 4 38 193 33 194 2.51e-23 105
MS.gene20366.t1 AT4G10550 40.220 363 200 8 208 563 358 710 2.90e-62 218
MS.gene20366.t1 AT4G10550 40.523 153 79 5 72 213 14 165 1.43e-20 96.3
MS.gene20366.t1 AT4G10550 40.220 363 200 8 208 563 358 710 2.90e-62 218
MS.gene20366.t1 AT4G10550 40.523 153 79 5 72 213 14 165 1.43e-20 96.3
MS.gene20366.t1 AT4G10550 40.220 363 200 8 208 563 430 782 3.31e-62 219
MS.gene20366.t1 AT4G10550 36.702 188 106 6 38 213 51 237 1.95e-21 99.4
MS.gene20366.t1 AT1G32970 41.160 362 186 8 214 563 376 722 3.59e-62 218
MS.gene20366.t1 AT4G10550 40.220 363 200 8 208 563 414 766 4.57e-62 218
MS.gene20366.t1 AT4G10550 32.735 223 132 7 3 213 5 221 1.03e-21 100
MS.gene20366.t1 AT4G10510 39.000 400 230 7 171 563 302 694 2.32e-61 215
MS.gene20366.t1 AT4G10510 42.857 126 65 3 74 193 1 125 6.57e-18 87.8
MS.gene20366.t1 AT4G10510 39.000 400 230 7 171 563 317 709 2.72e-61 215
MS.gene20366.t1 AT4G10510 42.857 126 65 3 74 193 16 140 7.00e-18 87.8
MS.gene20366.t1 AT4G10510 39.000 400 230 7 171 563 361 753 3.25e-61 216
MS.gene20366.t1 AT4G10510 36.747 166 97 4 35 193 20 184 1.51e-18 90.1
MS.gene20366.t1 AT4G26330 40.184 326 172 9 257 565 404 723 3.49e-61 215
MS.gene20366.t1 AT4G26330 31.746 126 78 3 71 188 18 143 1.43e-11 67.8
MS.gene20366.t1 AT4G10510 39.000 400 230 7 171 563 373 765 3.94e-61 216
MS.gene20366.t1 AT4G10510 34.737 190 114 5 13 193 8 196 1.65e-18 90.1
MS.gene20366.t1 AT4G26330 40.184 326 172 9 257 565 418 737 4.27e-61 215
MS.gene20366.t1 AT5G59090 38.259 379 203 11 196 563 368 726 8.03e-61 214
MS.gene20366.t1 AT5G59090 42.623 122 68 2 73 194 68 187 9.76e-23 103
MS.gene20366.t1 AT4G10540 40.884 362 200 7 208 563 410 763 8.65e-61 215
MS.gene20366.t1 AT4G10540 37.368 190 109 5 11 193 6 192 5.70e-23 103
MS.gene20366.t1 AT5G59090 38.259 379 203 11 196 563 370 728 1.06e-60 214
MS.gene20366.t1 AT5G59090 42.276 123 69 2 73 194 68 189 4.03e-22 101
MS.gene20366.t1 AT1G32940 37.500 400 236 8 171 563 319 711 1.69e-60 213
MS.gene20366.t1 AT1G32940 44.203 138 70 3 62 193 4 140 4.29e-22 101
MS.gene20366.t1 AT1G32940 37.500 400 236 8 171 563 319 711 1.69e-60 213
MS.gene20366.t1 AT1G32940 44.203 138 70 3 62 193 4 140 4.29e-22 101
MS.gene20366.t1 AT1G32950 39.889 361 205 6 208 563 357 710 2.27e-60 213
MS.gene20366.t1 AT1G32950 42.537 134 70 3 72 198 14 147 3.33e-21 98.2
MS.gene20366.t1 AT1G32940 37.500 400 236 8 171 563 370 762 2.28e-60 214
MS.gene20366.t1 AT1G32940 41.104 163 88 4 38 193 30 191 1.11e-23 106
MS.gene20366.t1 AT5G59090 37.995 379 199 11 196 563 370 723 2.74e-60 213
MS.gene20366.t1 AT5G59090 42.276 123 69 2 73 194 68 189 3.57e-22 101
MS.gene20366.t1 AT1G32950 39.889 361 205 6 208 563 408 761 2.92e-60 213
MS.gene20366.t1 AT1G32950 38.272 162 94 3 38 193 30 191 2.09e-22 102
MS.gene20366.t1 AT4G00230 37.203 379 202 12 201 565 388 744 1.13e-59 211
MS.gene20366.t1 AT4G00230 39.884 173 80 7 71 236 71 226 9.69e-22 100
MS.gene20366.t1 AT1G20150 37.887 388 210 11 201 566 395 773 1.24e-59 212
MS.gene20366.t1 AT1G20150 36.508 126 64 4 78 188 69 193 1.15e-12 71.2
MS.gene20366.t1 AT1G20160 37.037 378 212 12 201 561 352 720 7.45e-59 209
MS.gene20366.t1 AT1G20160 34.884 172 91 6 74 236 28 187 3.80e-17 85.5
MS.gene20366.t1 AT1G20160 36.842 380 214 12 201 563 391 761 9.56e-59 209
MS.gene20366.t1 AT1G20160 34.884 172 91 6 74 236 67 226 3.57e-17 85.9
MS.gene20366.t1 AT5G59120 37.203 379 207 11 196 563 369 727 1.98e-58 207
MS.gene20366.t1 AT5G59120 40.984 122 72 0 73 194 67 188 1.34e-21 99.8
MS.gene20366.t1 AT5G58840 37.433 374 206 11 205 563 346 706 2.51e-58 207
MS.gene20366.t1 AT5G58840 34.197 193 110 4 9 194 10 192 1.50e-22 102
MS.gene20366.t1 AT4G21640 42.295 305 159 6 267 563 432 727 3.22e-58 207
MS.gene20366.t1 AT4G21640 32.367 207 113 6 3 188 9 209 1.16e-21 99.8
MS.gene20366.t1 AT4G21650 39.233 339 186 7 233 563 434 760 2.02e-57 205
MS.gene20366.t1 AT4G21650 34.595 185 103 5 19 188 26 207 4.21e-21 98.2
MS.gene20366.t1 AT5G59190 38.810 353 176 12 193 528 327 656 4.34e-57 203
MS.gene20366.t1 AT5G59190 43.478 115 63 1 74 188 32 144 8.86e-21 97.1
MS.gene20366.t1 AT5G59100 36.772 378 204 11 200 563 381 737 5.89e-57 204
MS.gene20366.t1 AT5G59100 42.308 130 74 1 71 199 68 197 7.24e-25 109
MS.gene20366.t1 AT5G58830 37.995 379 198 12 205 563 344 705 7.46e-57 203
MS.gene20366.t1 AT5G58830 37.705 122 76 0 73 194 69 190 1.55e-19 93.2
MS.gene20366.t1 AT5G03620 36.298 416 218 14 175 566 368 760 1.93e-56 202
MS.gene20366.t1 AT5G03620 33.333 204 118 6 1 196 1 194 8.32e-23 103
MS.gene20366.t1 AT3G46850 38.770 374 198 13 200 563 382 734 2.22e-56 202
MS.gene20366.t1 AT3G46850 33.889 180 115 1 9 188 9 184 7.40e-24 106
MS.gene20366.t1 AT3G46840 36.800 375 204 12 200 563 382 734 2.69e-56 202
MS.gene20366.t1 AT3G46840 32.778 180 117 1 9 188 10 185 8.43e-22 100
MS.gene20366.t1 AT4G10530 37.535 357 196 9 211 563 402 735 3.44e-56 202
MS.gene20366.t1 AT4G10530 31.802 283 142 11 6 269 8 258 6.13e-24 107
MS.gene20366.t1 AT1G66220 39.359 343 187 9 229 566 421 747 4.64e-56 201
MS.gene20366.t1 AT1G66220 34.392 189 112 5 7 188 12 195 6.55e-23 103
MS.gene20366.t1 AT5G67090 36.066 366 198 9 204 556 377 719 1.43e-55 200
MS.gene20366.t1 AT5G67090 34.946 186 108 4 4 188 1 174 2.35e-28 120
MS.gene20366.t1 AT1G66210 39.763 337 179 9 235 563 430 750 5.40e-55 198
MS.gene20366.t1 AT1G66210 32.642 193 115 5 12 198 24 207 1.10e-22 103
MS.gene20366.t1 AT5G11940 40.584 308 175 4 260 563 449 752 7.00e-55 198
MS.gene20366.t1 AT5G11940 32.796 186 116 4 12 188 10 195 3.10e-21 98.6
MS.gene20366.t1 AT5G59130 36.220 381 209 11 193 563 365 721 1.67e-53 194
MS.gene20366.t1 AT5G59130 32.418 182 112 3 7 188 12 182 9.31e-21 97.1
MS.gene20366.t1 AT5G59130 36.220 381 209 11 193 563 330 686 1.76e-53 193
MS.gene20366.t1 AT5G59130 40.517 116 69 0 73 188 32 147 2.09e-21 99.0
MS.gene20366.t1 AT5G59130 35.958 381 210 11 193 563 369 725 1.93e-53 194
MS.gene20366.t1 AT5G59130 32.418 182 116 2 7 188 12 186 1.24e-21 99.8
MS.gene20366.t1 AT4G21326 40.645 310 174 5 261 566 387 690 3.76e-53 192
MS.gene20366.t1 AT4G21326 37.795 127 73 2 71 191 13 139 4.05e-22 101
MS.gene20366.t1 AT5G58820 40.000 305 156 10 272 563 410 700 9.97e-53 191
MS.gene20366.t1 AT5G58820 40.984 122 72 0 73 194 65 186 1.02e-20 96.7
MS.gene20366.t1 AT5G45640 36.434 387 219 10 192 563 377 751 2.26e-51 188
MS.gene20366.t1 AT5G45640 31.401 207 97 10 71 241 26 223 2.67e-13 73.6
MS.gene20366.t1 AT5G59130 35.958 381 200 13 193 563 369 715 3.20e-51 187
MS.gene20366.t1 AT5G59130 32.418 182 116 2 7 188 12 186 1.22e-21 99.8
MS.gene20366.t1 AT4G21323 39.159 309 177 8 260 563 491 793 2.16e-48 180
MS.gene20366.t1 AT4G21323 41.600 125 64 3 72 188 116 239 7.63e-19 90.9
MS.gene20366.t1 AT4G15040 34.492 374 211 11 201 563 335 685 2.70e-45 170
MS.gene20366.t1 AT4G15040 33.125 160 105 1 71 230 30 187 5.15e-16 82.0
MS.gene20366.t1 AT4G15040 34.492 374 211 11 201 563 335 685 2.70e-45 170
MS.gene20366.t1 AT4G15040 33.125 160 105 1 71 230 30 187 5.15e-16 82.0
MS.gene20366.t1 AT4G30020 32.706 425 225 17 181 561 402 809 5.19e-40 156
MS.gene20366.t1 AT4G30020 35.659 129 71 4 73 191 84 210 4.44e-14 75.9
MS.gene20366.t1 AT4G30020 32.706 425 225 17 181 561 402 809 5.19e-40 156
MS.gene20366.t1 AT4G30020 35.659 129 71 4 73 191 84 210 4.44e-14 75.9
MS.gene20366.t1 AT4G30020 32.706 425 225 17 181 561 402 809 5.19e-40 156
MS.gene20366.t1 AT4G30020 35.659 129 71 4 73 191 84 210 4.44e-14 75.9
MS.gene20366.t1 AT4G30020 32.706 425 225 17 181 561 402 809 5.19e-40 156
MS.gene20366.t1 AT4G30020 35.659 129 71 4 73 191 84 210 4.44e-14 75.9
MS.gene20366.t1 AT2G39850 36.678 289 146 12 300 563 489 765 7.25e-40 155
MS.gene20366.t1 AT2G39850 30.120 166 97 7 74 237 65 213 1.10e-13 74.7
MS.gene20366.t1 AT1G32980 46.237 186 93 4 348 529 3 185 1.24e-39 143
MS.gene20366.t1 AT2G19170 32.976 373 199 14 233 561 443 808 2.75e-38 150
MS.gene20366.t1 AT2G19170 35.659 129 70 4 73 191 84 209 1.33e-15 80.9
MS.gene20366.t1 AT2G19170 32.976 373 199 14 233 561 443 808 2.75e-38 150
MS.gene20366.t1 AT2G19170 35.659 129 70 4 73 191 84 209 1.33e-15 80.9
MS.gene20366.t1 AT5G44530 29.798 396 228 15 211 566 451 836 8.85e-36 143
MS.gene20366.t1 AT5G44530 36.025 161 82 7 44 192 80 231 1.90e-16 83.6
MS.gene20366.t1 AT5G03620 42.534 221 106 6 175 385 368 577 3.00e-34 137
MS.gene20366.t1 AT5G03620 33.333 204 118 6 1 196 1 194 6.23e-23 103
MS.gene20366.t1 AT1G62340 37.993 279 153 10 299 563 557 829 5.83e-34 137
MS.gene20366.t1 AT4G00230 41.624 197 97 5 201 389 388 574 4.60e-33 134
MS.gene20366.t1 AT4G00230 39.884 173 80 7 71 236 71 226 5.40e-22 100
MS.gene20366.t1 AT1G30600 34.138 290 161 11 299 566 548 829 6.11e-33 134
MS.gene20366.t1 AT1G30600 27.640 322 172 14 4 273 1 313 5.42e-18 88.6
MS.gene20366.t1 AT4G20430 32.986 288 164 11 299 566 573 851 9.26e-33 134
MS.gene20366.t1 AT4G20430 34.109 129 70 5 75 191 119 244 6.74e-14 75.5
MS.gene20366.t1 AT4G20430 32.986 288 164 11 299 566 573 851 9.26e-33 134
MS.gene20366.t1 AT4G20430 34.109 129 70 5 75 191 119 244 6.74e-14 75.5
MS.gene20366.t1 AT4G20430 32.986 288 164 11 299 566 549 827 1.08e-32 134
MS.gene20366.t1 AT4G20430 34.109 129 70 5 75 191 119 244 6.87e-14 75.5
MS.gene20366.t1 AT5G44530 28.504 421 226 17 211 566 451 861 4.83e-32 132
MS.gene20366.t1 AT5G44530 36.025 161 82 7 44 192 80 231 1.76e-16 83.6
MS.gene20366.t1 AT5G58840 38.624 189 105 4 205 384 346 532 1.12e-27 117
MS.gene20366.t1 AT5G58840 34.197 193 110 4 9 194 10 192 1.35e-22 102
MS.gene20366.t1 AT1G32940 36.818 220 131 5 171 385 370 586 1.31e-26 114
MS.gene20366.t1 AT1G32940 41.104 163 88 4 38 193 30 191 1.80e-23 105
MS.gene20366.t1 AT5G59110 37.195 164 93 4 408 565 8 167 1.81e-23 97.8
MS.gene20366.t1 AT5G58840 34.197 193 110 4 9 194 10 192 7.26e-23 102
MS.gene20366.t1 AT1G20160 34.884 172 91 6 74 236 67 226 3.25e-17 85.5
MS.gene20366.t1 AT5G44530 36.025 161 82 7 44 192 80 231 2.07e-16 83.2

Find 126 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTAGATCGATGTTCTTTA+AGG 0.119428 5.1:+4819693 None:intergenic
TGTAATTCAAGGGTCCTTTC+AGG 0.248048 5.1:+4820534 None:intergenic
CTTGGAAAAGGCGTCATAAT+TGG 0.252287 5.1:-4820447 MS.gene20366:CDS
CCGGGATCATTTGCTTTAAC+AGG 0.265358 5.1:+4819067 None:intergenic
TGAAGAGATTTGGCTTCTTC+TGG 0.277617 5.1:+4820585 None:intergenic
ATATTCAAAGGAACAGTAAT+TGG 0.284575 5.1:-4819445 MS.gene20366:CDS
CCTTCTTTCTCTATTCTGTT+GGG 0.284617 5.1:-4818902 MS.gene20366:CDS
TGAATTTATACCACAAATAA+AGG 0.290855 5.1:-4818723 MS.gene20366:CDS
ACCTTTCGCTTGAAGAGATT+TGG 0.292709 5.1:+4820575 None:intergenic
TGTTCCTTATTTGTGTGGTT+TGG 0.295390 5.1:-4819014 MS.gene20366:CDS
CTTGTGTATGCAGGCTCATT+TGG 0.296867 5.1:-4819760 MS.gene20366:intron
TAAGAATTCCTGGACTTTCT+TGG 0.302980 5.1:+4819374 None:intergenic
GGATAATTCAGTTGAGCTTC+TGG 0.309776 5.1:+4818923 None:intergenic
TTGCTCAGGGCTCTCTCACT+TGG 0.314858 5.1:-4818679 MS.gene20366:CDS
AACTCACACTCCAACATTCT+TGG 0.314948 5.1:-4820508 MS.gene20366:CDS
TGCCGCCGCCACCTGCAAAA+TGG 0.315871 5.1:-4820371 MS.gene20366:CDS
TCCTTCTTTCTCTATTCTGT+TGG 0.316195 5.1:-4818903 MS.gene20366:CDS
GTTCCTTATTTGTGTGGTTT+GGG 0.319903 5.1:-4819013 MS.gene20366:CDS
CCTCGGCGGGATCCCTATAC+TGG 0.329513 5.1:-4819143 MS.gene20366:CDS
CTTGAAGTACCTTTGGCTTT+GGG 0.329870 5.1:-4818809 MS.gene20366:CDS
ATGTCTGGTTTAAGAATTCC+TGG 0.338531 5.1:+4819364 None:intergenic
AATCAGTCTTTGTGTCTTCC+AGG 0.338756 5.1:-4819718 MS.gene20366:CDS
CACTTGAAAATGACTGATAT+TGG 0.347276 5.1:+4818629 None:intergenic
CAATGTTGCTGTTGGATTGT+AGG 0.352832 5.1:+4819468 None:intergenic
TAACCCAAACCACACAAATA+AGG 0.363721 5.1:+4819010 None:intergenic
AATCAGAAGATTTGCATAGT+TGG 0.366643 5.1:-4820701 MS.gene20366:CDS
AGTTGAACTTGAAGTACCTT+TGG 0.373834 5.1:-4818816 MS.gene20366:CDS
ATAGCGGCTGGTGACCAATC+AGG 0.374741 5.1:+4819202 None:intergenic
TATGCAGGCTCATTTGGATT+TGG 0.377059 5.1:-4819754 MS.gene20366:intron
ATTCCTGGACTTTCTTGGCT+TGG 0.380426 5.1:+4819379 None:intergenic
ACTTGAAGTACCTTTGGCTT+TGG 0.383368 5.1:-4818810 MS.gene20366:CDS
TGCTCAGGGCTCTCTCACTT+GGG 0.385067 5.1:-4818678 MS.gene20366:CDS
GGACAAGAAGTTCTAAATTC+AGG 0.404673 5.1:-4819619 MS.gene20366:CDS
TCTTGTCCTTTCACAGTGCT+TGG 0.411260 5.1:+4819634 None:intergenic
CCCAACATTAGTCAAGGTTC+TGG 0.411861 5.1:+4818859 None:intergenic
ACCAGAACCTTGACTAATGT+TGG 0.414293 5.1:-4818860 MS.gene20366:CDS
CATATCAATGTTGGCGGCAG+AGG 0.417966 5.1:-4820802 MS.gene20366:CDS
ACAAAGACTGATTCTGTGTC+TGG 0.421506 5.1:+4819728 None:intergenic
TCGATGTTCTTTAAGGATCC+TGG 0.430796 5.1:+4819700 None:intergenic
ATTCTTAAACCAGACATCAT+TGG 0.438516 5.1:-4819358 MS.gene20366:CDS
AAAAGCCTTTGATCCAGTAT+AGG 0.446877 5.1:+4819130 None:intergenic
ACTCACACTCCAACATTCTT+GGG 0.447446 5.1:-4820507 MS.gene20366:CDS
AAAGCCTTTGATCCAGTATA+GGG 0.451944 5.1:+4819131 None:intergenic
TTGAATATCAATGTTGCTGT+TGG 0.454407 5.1:+4819460 None:intergenic
CCAGAACCTTGACTAATGTT+GGG 0.456402 5.1:-4818859 MS.gene20366:CDS
TGTGAGTTGTATGTAATTCA+AGG 0.467665 5.1:+4820523 None:intergenic
ATTCCAAATCATGATGAAGA+TGG 0.468472 5.1:-4820865 None:intergenic
CATTGAAAGATGGATGTAAA+GGG 0.473350 5.1:+4820403 None:intergenic
TCGTACCGCAAAGTAGCCTC+TGG 0.478609 5.1:-4820627 MS.gene20366:CDS
TTGAATATCATAAACAAGAC+CGG 0.483041 5.1:+4819048 None:intergenic
ACACCTGGACCAATGATGTC+TGG 0.483279 5.1:+4819349 None:intergenic
GTATGCAACAATAAGCTCAT+AGG 0.484471 5.1:-4820318 MS.gene20366:intron
CTTCTTTCTCTATTCTGTTG+GGG 0.489382 5.1:-4818901 MS.gene20366:CDS
TGTTAACATTCTAGCTGCAT+GGG 0.493438 5.1:-4819329 MS.gene20366:CDS
CTTGCAAATTCAGAAACACT+TGG 0.495544 5.1:-4819580 MS.gene20366:CDS
CAAGTGTTTCTGAATTTGCA+AGG 0.496447 5.1:+4819581 None:intergenic
TCAGTGAATGTTATTTCACT+TGG 0.504064 5.1:+4818773 None:intergenic
CCGGAAACAATGTTAAAAGC+TGG 0.514922 5.1:+4819283 None:intergenic
TGTGAGGAAAAGTTTGTGGA+AGG 0.515063 5.1:+4820667 None:intergenic
TCTTTGTGAGGAAAAGTTTG+TGG 0.517275 5.1:+4820663 None:intergenic
TCATTGAAAGATGGATGTAA+AGG 0.517381 5.1:+4820402 None:intergenic
ATTGTTGCATACTTGCCCTC+CGG 0.517657 5.1:+4820329 None:intergenic
CAAATACTCTCAACCTCGGC+GGG 0.518464 5.1:-4819156 MS.gene20366:CDS
TGTTTCAGACCCAAGAATGT+TGG 0.519200 5.1:+4820498 None:intergenic
AAAACCATTCTTTCTTTGTG+AGG 0.524993 5.1:+4820651 None:intergenic
AAATAAGGAACATAATCTTC+AGG 0.532280 5.1:+4819025 None:intergenic
GATTATGTTCCTTATTTGTG+TGG 0.533035 5.1:-4819019 MS.gene20366:CDS
GTGTTAACATTCTAGCTGCA+TGG 0.535403 5.1:-4819330 MS.gene20366:CDS
TGTCTGATAAACATGCTGTT+AGG 0.536213 5.1:-4818655 MS.gene20366:CDS
TGCAAACCCAACATTAGTCA+AGG 0.536374 5.1:+4818853 None:intergenic
TTAAAGAACATCGATCTAAG+TGG 0.536640 5.1:-4819691 MS.gene20366:CDS
GGACCAAGCCAAGAAAGTCC+AGG 0.539803 5.1:-4819382 MS.gene20366:CDS
CATAATTGGTATCATAGACT+CGG 0.541565 5.1:-4820433 MS.gene20366:CDS
AGGACAAGACATTGAAGTGC+CGG 0.543414 5.1:+4819264 None:intergenic
ACAGCAACATTGATATTCAA+AGG 0.548470 5.1:-4819457 MS.gene20366:CDS
AGCGACGATAACCTTGGAAA+AGG 0.549675 5.1:-4820459 MS.gene20366:CDS
TGAAACAAGGACAAGGATTG+TGG 0.550041 5.1:-4820482 MS.gene20366:CDS
AAGTTTGTGGAAGGAATGAA+TGG 0.550124 5.1:+4820676 None:intergenic
ATTCCTTCGTCATTGAAAGA+TGG 0.552371 5.1:+4820393 None:intergenic
AAACCAGACATCATTGGTCC+AGG 0.552481 5.1:-4819352 MS.gene20366:CDS
CCGCCACCTGCAAAATGGAA+AGG 0.559333 5.1:-4820366 MS.gene20366:CDS
CAAATCCAGAGGCTACTTTG+CGG 0.562471 5.1:+4820622 None:intergenic
AAAGTAGTGTTGTGTGATGT+CGG 0.562967 5.1:-4819667 MS.gene20366:CDS
TGCTGCATACCATGAAAATG+AGG 0.563677 5.1:+4820823 None:intergenic
CCCAACAGAATAGAGAAAGA+AGG 0.564665 5.1:+4818902 None:intergenic
CATCCATCTTTCAATGACGA+AGG 0.565510 5.1:-4820396 MS.gene20366:CDS
TTGTAACTCACTTCAACCGC+AGG 0.566399 5.1:+4819526 None:intergenic
ATGTCTTGTCCTCACCTAAG+TGG 0.567792 5.1:-4819253 MS.gene20366:CDS
GCCAAATCTCTTCAAGCGAA+AGG 0.568492 5.1:-4820576 MS.gene20366:CDS
AGATTGAAGTTATTGTTCAG+TGG 0.577992 5.1:-4818976 MS.gene20366:CDS
GGTATGCAGCATATCAATGT+TGG 0.578782 5.1:-4820811 MS.gene20366:CDS
GTTGAAGTGAGTTACAAAGC+TGG 0.580134 5.1:-4819520 MS.gene20366:CDS
CCTGTTAAAGCAAATGATCC+CGG 0.580345 5.1:-4819067 MS.gene20366:CDS
CACAAATAAAGGAAAACAGA+AGG 0.583247 5.1:-4818712 MS.gene20366:CDS
TAGCGGCTGGTGACCAATCA+GGG 0.585200 5.1:+4819203 None:intergenic
CGTGTTCCAAGCACTGTGAA+AGG 0.585302 5.1:-4819640 MS.gene20366:CDS
ATGCAGCATATCAATGTTGG+CGG 0.592468 5.1:-4820808 MS.gene20366:CDS
GAAGAAAATGAAACAACAGA+AGG 0.598818 5.1:+4819409 None:intergenic
TCAATGCAGCAATACCACTT+AGG 0.599841 5.1:+4819239 None:intergenic
ACATTCTTGGGTCTGAAACA+AGG 0.600413 5.1:-4820495 MS.gene20366:CDS
GGATCCCTATACTGGATCAA+AGG 0.600812 5.1:-4819135 MS.gene20366:CDS
AAAGGCCATTGTGAATTCAC+CGG 0.605512 5.1:-4820348 MS.gene20366:CDS
GTGAGTTGTATGTAATTCAA+GGG 0.606005 5.1:+4820524 None:intergenic
TTCTGTAAATGTTCTACCTG+CGG 0.607789 5.1:-4819542 MS.gene20366:CDS
CCGGTAGCGAAAATATCAGC+CGG 0.608618 5.1:+4819106 None:intergenic
TTGTGGAGCGACGATAACCT+TGG 0.611310 5.1:-4820465 MS.gene20366:CDS
AGGATTAACATGTCCTGCAC+CGG 0.613274 5.1:+4819087 None:intergenic
TGAATATCATAAACAAGACC+GGG 0.615921 5.1:+4819049 None:intergenic
ATTCACTGAGGTAAATGAGA+AGG 0.616902 5.1:-4818759 MS.gene20366:CDS
TTGTGTCAGCAAGACCTGAA+AGG 0.617538 5.1:-4820548 MS.gene20366:CDS
ATAATTGGTATCATAGACTC+GGG 0.626759 5.1:-4820432 MS.gene20366:CDS
GCAGCTAGAATGTTAACACC+TGG 0.628156 5.1:+4819334 None:intergenic
GCCATTGTGAATTCACCGGA+GGG 0.631328 5.1:-4820344 MS.gene20366:CDS
ACTGCAAATACTCTCAACCT+CGG 0.640806 5.1:-4819160 MS.gene20366:CDS
GGCCATTGTGAATTCACCGG+AGG 0.645647 5.1:-4820345 MS.gene20366:CDS
CAAGAAGTTCTAAATTCAGG+TGG 0.648225 5.1:-4819616 MS.gene20366:CDS
ACACTCATACCCAAAGCCAA+AGG 0.650995 5.1:+4818800 None:intergenic
TTGGGTCTGAAACAAGGACA+AGG 0.664078 5.1:-4820489 MS.gene20366:CDS
GCCCTCCGGTGAATTCACAA+TGG 0.677287 5.1:+4820343 None:intergenic
CCAGTATAGGGATCCCGCCG+AGG 0.680914 5.1:+4819143 None:intergenic
GCAAATACTCTCAACCTCGG+CGG 0.682944 5.1:-4819157 MS.gene20366:CDS
GTTAACATTCTAGCTGCATG+GGG 0.695539 5.1:-4819328 MS.gene20366:CDS
GCAGCAATACCACTTAGGTG+AGG 0.726862 5.1:+4819244 None:intergenic
TAGCTTCACAGCAAATCCAG+AGG 0.735330 5.1:+4820611 None:intergenic
AAGTGAAATAACATTCACTG+AGG 0.755767 5.1:-4818771 MS.gene20366:CDS
GTAGTGTTGTGTGATGTCGG+AGG 0.796613 5.1:-4819664 MS.gene20366:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTGTTCAGAAAAATCTTT+GGG + chr5.1:4819696-4819715 None:intergenic 20.0%
!! TAATTGTTCAGAAAAATCTT+TGG + chr5.1:4819697-4819716 None:intergenic 20.0%
!! TGAATTTATACCACAAATAA+AGG - chr5.1:4820760-4820779 MS.gene20366:CDS 20.0%
! AAATAAGGAACATAATCTTC+AGG + chr5.1:4820461-4820480 None:intergenic 25.0%
! ATAGATATAGCTATTGAAGA+TGG - chr5.1:4819411-4819430 MS.gene20366:CDS 25.0%
! ATATTCAAAGGAACAGTAAT+TGG - chr5.1:4820038-4820057 MS.gene20366:intron 25.0%
! TTGAATATCATAAACAAGAC+CGG + chr5.1:4820438-4820457 None:intergenic 25.0%
AAAACCATTCTTTCTTTGTG+AGG + chr5.1:4818835-4818854 None:intergenic 30.0%
AAGTGAAATAACATTCACTG+AGG - chr5.1:4820712-4820731 MS.gene20366:CDS 30.0%
AATCAGAAGATTTGCATAGT+TGG - chr5.1:4818782-4818801 MS.gene20366:CDS 30.0%
ACAGCAACATTGATATTCAA+AGG - chr5.1:4820026-4820045 MS.gene20366:intron 30.0%
ACTTAGATCGATGTTCTTTA+AGG + chr5.1:4819793-4819812 None:intergenic 30.0%
AGATTGAAGTTATTGTTCAG+TGG - chr5.1:4820507-4820526 MS.gene20366:CDS 30.0%
ATAATTGGTATCATAGACTC+GGG - chr5.1:4819051-4819070 MS.gene20366:CDS 30.0%
ATTCTTAAACCAGACATCAT+TGG - chr5.1:4820125-4820144 MS.gene20366:intron 30.0%
CACAAATAAAGGAAAACAGA+AGG - chr5.1:4820771-4820790 MS.gene20366:CDS 30.0%
CACTTGAAAATGACTGATAT+TGG + chr5.1:4820857-4820876 None:intergenic 30.0%
CATAATTGGTATCATAGACT+CGG - chr5.1:4819050-4819069 MS.gene20366:CDS 30.0%
CATTGAAAGATGGATGTAAA+GGG + chr5.1:4819083-4819102 None:intergenic 30.0%
GAAGAAAATGAAACAACAGA+AGG + chr5.1:4820077-4820096 None:intergenic 30.0%
GGAAATGGAAATGAATATGA+AGG - chr5.1:4819654-4819673 MS.gene20366:CDS 30.0%
GTGAGTTGTATGTAATTCAA+GGG + chr5.1:4818962-4818981 None:intergenic 30.0%
TCATTGAAAGATGGATGTAA+AGG + chr5.1:4819084-4819103 None:intergenic 30.0%
TGAATATCATAAACAAGACC+GGG + chr5.1:4820437-4820456 None:intergenic 30.0%
TGTGAGTTGTATGTAATTCA+AGG + chr5.1:4818963-4818982 None:intergenic 30.0%
TTAAAGAACATCGATCTAAG+TGG - chr5.1:4819792-4819811 MS.gene20366:intron 30.0%
TTGAATATCAATGTTGCTGT+TGG + chr5.1:4820026-4820045 None:intergenic 30.0%
! GATTATGTTCCTTATTTGTG+TGG - chr5.1:4820464-4820483 MS.gene20366:CDS 30.0%
! TTTTCCTCACAAAGAAAGAA+TGG - chr5.1:4818828-4818847 MS.gene20366:CDS 30.0%
!! CTTCTGTTTTCCTTTATTTG+TGG + chr5.1:4820773-4820792 None:intergenic 30.0%
!! GTTGTTTCATTTTCTTCAAG+AGG - chr5.1:4820080-4820099 MS.gene20366:intron 30.0%
!! TCAGTGAATGTTATTTCACT+TGG + chr5.1:4820713-4820732 None:intergenic 30.0%
!!! AGTCTTTTTGGTAATGCTAA+AGG - chr5.1:4819294-4819313 MS.gene20366:CDS 30.0%
!!! CATGATTGCTGATTTTATAG+CGG + chr5.1:4820300-4820319 None:intergenic 30.0%
AAAAGCCTTTGATCCAGTAT+AGG + chr5.1:4820356-4820375 None:intergenic 35.0%
AAAGCCTTTGATCCAGTATA+GGG + chr5.1:4820355-4820374 None:intergenic 35.0%
AAAGTAGTGTTGTGTGATGT+CGG - chr5.1:4819816-4819835 MS.gene20366:intron 35.0%
AAGTTTGTGGAAGGAATGAA+TGG + chr5.1:4818810-4818829 None:intergenic 35.0%
ATTCACTGAGGTAAATGAGA+AGG - chr5.1:4820724-4820743 MS.gene20366:CDS 35.0%
ATTCCTTCGTCATTGAAAGA+TGG + chr5.1:4819093-4819112 None:intergenic 35.0%
CCTTCTTTCTCTATTCTGTT+GGG - chr5.1:4820581-4820600 MS.gene20366:CDS 35.0%
CTTCTTTCTCTATTCTGTTG+GGG - chr5.1:4820582-4820601 MS.gene20366:CDS 35.0%
CTTGCAAATTCAGAAACACT+TGG - chr5.1:4819903-4819922 MS.gene20366:intron 35.0%
CTTTCACTTTCACTTGGTTT+AGG - chr5.1:4819444-4819463 MS.gene20366:CDS 35.0%
GATGTTCTTTCACTTTCACT+TGG - chr5.1:4819438-4819457 MS.gene20366:CDS 35.0%
GTATGCAACAATAAGCTCAT+AGG - chr5.1:4819165-4819184 MS.gene20366:CDS 35.0%
GTTCAGAAAAATCTTTGGGT+TGG + chr5.1:4819692-4819711 None:intergenic 35.0%
TAACCCAAACCACACAAATA+AGG + chr5.1:4820476-4820495 None:intergenic 35.0%
TAAGAATTCCTGGACTTTCT+TGG + chr5.1:4820112-4820131 None:intergenic 35.0%
TACATTGCTATGTGAGCATT+AGG + chr5.1:4819339-4819358 None:intergenic 35.0%
TCAAAAATTCTCACCCTGAT+TGG - chr5.1:4820267-4820286 MS.gene20366:intron 35.0%
TCCTTCTTTCTCTATTCTGT+TGG - chr5.1:4820580-4820599 MS.gene20366:CDS 35.0%
TCTTTGTGAGGAAAAGTTTG+TGG + chr5.1:4818823-4818842 None:intergenic 35.0%
TGTCTGATAAACATGCTGTT+AGG - chr5.1:4820828-4820847 MS.gene20366:CDS 35.0%
TTATTACCACTTGTGTATGC+AGG - chr5.1:4819714-4819733 MS.gene20366:CDS 35.0%
TTCTGTAAATGTTCTACCTG+CGG - chr5.1:4819941-4819960 MS.gene20366:intron 35.0%
TTTGAAGACCCAATTGCAAT+TGG - chr5.1:4819480-4819499 MS.gene20366:CDS 35.0%
! AAGGAATCAAACTTTTGCTC+AGG - chr5.1:4820790-4820809 MS.gene20366:CDS 35.0%
! AGGAATCAAACTTTTGCTCA+GGG - chr5.1:4820791-4820810 MS.gene20366:CDS 35.0%
! AGTTGAACTTGAAGTACCTT+TGG - chr5.1:4820667-4820686 MS.gene20366:CDS 35.0%
! ATGTCTGGTTTAAGAATTCC+TGG + chr5.1:4820122-4820141 None:intergenic 35.0%
! CAAGTGTTTCTGAATTTGCA+AGG + chr5.1:4819905-4819924 None:intergenic 35.0%
! CCAGCTTTTAACATTGTTTC+CGG - chr5.1:4820200-4820219 MS.gene20366:intron 35.0%
! CTTTGAAAGTTCTGTCTTAG+CGG - chr5.1:4819386-4819405 MS.gene20366:CDS 35.0%
! GTAGAAGATGCAAGTCTTTT+TGG - chr5.1:4819282-4819301 MS.gene20366:CDS 35.0%
! GTTCCTTATTTGTGTGGTTT+GGG - chr5.1:4820470-4820489 MS.gene20366:CDS 35.0%
! TGTTAACATTCTAGCTGCAT+GGG - chr5.1:4820154-4820173 MS.gene20366:intron 35.0%
! TGTTCCTTATTTGTGTGGTT+TGG - chr5.1:4820469-4820488 MS.gene20366:CDS 35.0%
!! CAAAAGCACCAATTGCAATT+GGG + chr5.1:4819491-4819510 None:intergenic 35.0%
!! CAAGAAGTTCTAAATTCAGG+TGG - chr5.1:4819867-4819886 MS.gene20366:intron 35.0%
!! GGACAAGAAGTTCTAAATTC+AGG - chr5.1:4819864-4819883 MS.gene20366:intron 35.0%
AAAGGCCATTGTGAATTCAC+CGG - chr5.1:4819135-4819154 MS.gene20366:CDS 40.0%
AACTCACACTCCAACATTCT+TGG - chr5.1:4818975-4818994 MS.gene20366:CDS 40.0%
AATCAGTCTTTGTGTCTTCC+AGG - chr5.1:4819765-4819784 MS.gene20366:intron 40.0%
ACCAGAACCTTGACTAATGT+TGG - chr5.1:4820623-4820642 MS.gene20366:CDS 40.0%
ACCTTTCGCTTGAAGAGATT+TGG + chr5.1:4818911-4818930 None:intergenic 40.0%
ACTCACACTCCAACATTCTT+GGG - chr5.1:4818976-4818995 MS.gene20366:CDS 40.0%
ACTGCAAATACTCTCAACCT+CGG - chr5.1:4820323-4820342 MS.gene20366:CDS 40.0%
ATGCAGCATATCAATGTTGG+CGG - chr5.1:4818675-4818694 MS.gene20366:CDS 40.0%
ATTGTAGCATCAGCAAAGCT+AGG - chr5.1:4819633-4819652 MS.gene20366:CDS 40.0%
CATCCATCTTTCAATGACGA+AGG - chr5.1:4819087-4819106 MS.gene20366:CDS 40.0%
CCAGAACCTTGACTAATGTT+GGG - chr5.1:4820624-4820643 MS.gene20366:CDS 40.0%
CCCAACAGAATAGAGAAAGA+AGG + chr5.1:4820584-4820603 None:intergenic 40.0%
CCGGAAACAATGTTAAAAGC+TGG + chr5.1:4820203-4820222 None:intergenic 40.0%
CCGTGGAAGATATTCTCAAA+CGG + chr5.1:4819228-4819247 None:intergenic 40.0%
CCGTTTGAGAATATCTTCCA+CGG - chr5.1:4819225-4819244 MS.gene20366:CDS 40.0%
CCTGTTAAAGCAAATGATCC+CGG - chr5.1:4820416-4820435 MS.gene20366:CDS 40.0%
GCAATTGGGTCTTCAAAGAA+TGG + chr5.1:4819477-4819496 None:intergenic 40.0%
GGATAATTCAGTTGAGCTTC+TGG + chr5.1:4820563-4820582 None:intergenic 40.0%
GGTATGCAGCATATCAATGT+TGG - chr5.1:4818672-4818691 MS.gene20366:CDS 40.0%
GTTGAAGTGAGTTACAAAGC+TGG - chr5.1:4819963-4819982 MS.gene20366:intron 40.0%
TATGCAGGCTCATTTGGATT+TGG - chr5.1:4819729-4819748 MS.gene20366:CDS 40.0%
TCAATGCAGCAATACCACTT+AGG + chr5.1:4820247-4820266 None:intergenic 40.0%
TGAAACAAGGACAAGGATTG+TGG - chr5.1:4819001-4819020 MS.gene20366:CDS 40.0%
TGCAAACCCAACATTAGTCA+AGG + chr5.1:4820633-4820652 None:intergenic 40.0%
TGCTGCATACCATGAAAATG+AGG + chr5.1:4818663-4818682 None:intergenic 40.0%
TGGAAGATATTCTCAAACGG+AGG + chr5.1:4819225-4819244 None:intergenic 40.0%
TGTAATTCAAGGGTCCTTTC+AGG + chr5.1:4818952-4818971 None:intergenic 40.0%
TGTGAGGAAAAGTTTGTGGA+AGG + chr5.1:4818819-4818838 None:intergenic 40.0%
TGTTTCAGACCCAAGAATGT+TGG + chr5.1:4818988-4819007 None:intergenic 40.0%
! ACAAAGACTGATTCTGTGTC+TGG + chr5.1:4819758-4819777 None:intergenic 40.0%
! ACATTCTTGGGTCTGAAACA+AGG - chr5.1:4818988-4819007 MS.gene20366:CDS 40.0%
! ACTTGAAGTACCTTTGGCTT+TGG - chr5.1:4820673-4820692 MS.gene20366:CDS 40.0%
! CAATGTTGCTGTTGGATTGT+AGG + chr5.1:4820018-4820037 None:intergenic 40.0%
! CAATTATGACGCCTTTTCCA+AGG + chr5.1:4819038-4819057 None:intergenic 40.0%
! GCTTTTGCTGCTACTCAAAA+TGG - chr5.1:4819504-4819523 MS.gene20366:CDS 40.0%
! GTGTTAACATTCTAGCTGCA+TGG - chr5.1:4820153-4820172 MS.gene20366:intron 40.0%
! GTTAACATTCTAGCTGCATG+GGG - chr5.1:4820155-4820174 MS.gene20366:intron 40.0%
! TCGATGTTCTTTAAGGATCC+TGG + chr5.1:4819786-4819805 None:intergenic 40.0%
! TGAAGAGATTTGGCTTCTTC+TGG + chr5.1:4818901-4818920 None:intergenic 40.0%
!! CTTGAAGTACCTTTGGCTTT+GGG - chr5.1:4820674-4820693 MS.gene20366:CDS 40.0%
!! CTTGGAAAAGGCGTCATAAT+TGG - chr5.1:4819036-4819055 MS.gene20366:CDS 40.0%
!! GCAAAAGCACCAATTGCAAT+TGG + chr5.1:4819492-4819511 None:intergenic 40.0%
!! GCTTGTTAGCCTCATTTTCA+TGG - chr5.1:4818651-4818670 MS.gene20366:CDS 40.0%
!!! ATTGCTGATTTTATAGCGGC+TGG + chr5.1:4820296-4820315 None:intergenic 40.0%
AAACCAGACATCATTGGTCC+AGG - chr5.1:4820131-4820150 MS.gene20366:intron 45.0%
AATGAGCCTGCATACACAAG+TGG + chr5.1:4819723-4819742 None:intergenic 45.0%
ACACTCATACCCAAAGCCAA+AGG + chr5.1:4820686-4820705 None:intergenic 45.0%
AGCGACGATAACCTTGGAAA+AGG - chr5.1:4819024-4819043 MS.gene20366:CDS 45.0%
AGGACAAGACATTGAAGTGC+CGG + chr5.1:4820222-4820241 None:intergenic 45.0%
AGGATTAACATGTCCTGCAC+CGG + chr5.1:4820399-4820418 None:intergenic 45.0%
ATGTCTTGTCCTCACCTAAG+TGG - chr5.1:4820230-4820249 MS.gene20366:intron 45.0%
ATTCCTGGACTTTCTTGGCT+TGG + chr5.1:4820107-4820126 None:intergenic 45.0%
ATTGTTGCATACTTGCCCTC+CGG + chr5.1:4819157-4819176 None:intergenic 45.0%
CCCAACATTAGTCAAGGTTC+TGG + chr5.1:4820627-4820646 None:intergenic 45.0%
CCGGGATCATTTGCTTTAAC+AGG + chr5.1:4820419-4820438 None:intergenic 45.0%
CTTGTGTATGCAGGCTCATT+TGG - chr5.1:4819723-4819742 MS.gene20366:CDS 45.0%
GCAGCTAGAATGTTAACACC+TGG + chr5.1:4820152-4820171 None:intergenic 45.0%
GCATCAGCAAAGCTAGGAAA+TGG - chr5.1:4819639-4819658 MS.gene20366:CDS 45.0%
GCCAAATCTCTTCAAGCGAA+AGG - chr5.1:4818907-4818926 MS.gene20366:CDS 45.0%
GCTCATAGGTGCAAGAAACA+TGG - chr5.1:4819179-4819198 MS.gene20366:CDS 45.0%
GGATCCCTATACTGGATCAA+AGG - chr5.1:4820348-4820367 MS.gene20366:CDS 45.0%
TAGCTTCACAGCAAATCCAG+AGG + chr5.1:4818875-4818894 None:intergenic 45.0%
TCTTGTCCTTTCACAGTGCT+TGG + chr5.1:4819852-4819871 None:intergenic 45.0%
TTGTAACTCACTTCAACCGC+AGG + chr5.1:4819960-4819979 None:intergenic 45.0%
TTGTGTCAGCAAGACCTGAA+AGG - chr5.1:4818935-4818954 MS.gene20366:CDS 45.0%
! AATGCTAAAGGTGTAGCAGC+TGG - chr5.1:4819306-4819325 MS.gene20366:CDS 45.0%
! ACTGGATCAAAGGCTTTTGC+CGG - chr5.1:4820358-4820377 MS.gene20366:CDS 45.0%
! CAAATCCAGAGGCTACTTTG+CGG + chr5.1:4818864-4818883 None:intergenic 45.0%
! CAATGGCCTTTCCATTTTGC+AGG + chr5.1:4819126-4819145 None:intergenic 45.0%
! TAAAGGTGTAGCAGCTGGTA+TGG - chr5.1:4819311-4819330 MS.gene20366:CDS 45.0%
! TTGGGTCTGAAACAAGGACA+AGG - chr5.1:4818994-4819013 MS.gene20366:CDS 45.0%
ACACCTGGACCAATGATGTC+TGG + chr5.1:4820137-4820156 None:intergenic 50.0%
AGTTGCTCTGCTGCAAACTC+TGG - chr5.1:4819537-4819556 MS.gene20366:CDS 50.0%
CAAATACTCTCAACCTCGGC+GGG - chr5.1:4820327-4820346 MS.gene20366:CDS 50.0%
CATATCAATGTTGGCGGCAG+AGG - chr5.1:4818681-4818700 MS.gene20366:CDS 50.0%
CCGGTAGCGAAAATATCAGC+CGG + chr5.1:4820380-4820399 None:intergenic 50.0%
GCAAATACTCTCAACCTCGG+CGG - chr5.1:4820326-4820345 MS.gene20366:CDS 50.0%
GCAGCAATACCACTTAGGTG+AGG + chr5.1:4820242-4820261 None:intergenic 50.0%
GCCATTGTGAATTCACCGGA+GGG - chr5.1:4819139-4819158 MS.gene20366:CDS 50.0%
GTAGTGTTGTGTGATGTCGG+AGG - chr5.1:4819819-4819838 MS.gene20366:intron 50.0%
TTGTGCTTGCACCAACAGTG+AGG + chr5.1:4819602-4819621 None:intergenic 50.0%
TTGTGGAGCGACGATAACCT+TGG - chr5.1:4819018-4819037 MS.gene20366:CDS 50.0%
! CCGGCTGATATTTTCGCTAC+CGG - chr5.1:4820377-4820396 MS.gene20366:CDS 50.0%
! CCTTTCCATTTTGCAGGTGG+CGG + chr5.1:4819120-4819139 None:intergenic 50.0%
! CGTGTTCCAAGCACTGTGAA+AGG - chr5.1:4819843-4819862 MS.gene20366:intron 50.0%
! GATATTTTCGCTACCGGTGC+AGG - chr5.1:4820383-4820402 MS.gene20366:CDS 50.0%
! TGGCCTTTCCATTTTGCAGG+TGG + chr5.1:4819123-4819142 None:intergenic 50.0%
!! TTGGAGAGAGTGCTGTATCC+AGG + chr5.1:4819564-4819583 None:intergenic 50.0%
ATAGCGGCTGGTGACCAATC+AGG + chr5.1:4820284-4820303 None:intergenic 55.0%
CCGCCACCTGCAAAATGGAA+AGG - chr5.1:4819117-4819136 MS.gene20366:CDS 55.0%
CTCTCTCCAACGAAGCTCCT+TGG - chr5.1:4819574-4819593 MS.gene20366:CDS 55.0%
GAGGATCCAAGGAGCTTCGT+TGG + chr5.1:4819583-4819602 None:intergenic 55.0%
GCACCAACAGTGAGGATCCA+AGG + chr5.1:4819594-4819613 None:intergenic 55.0%
GCCCTCCGGTGAATTCACAA+TGG + chr5.1:4819143-4819162 None:intergenic 55.0%
GCTCCTTGGATCCTCACTGT+TGG - chr5.1:4819588-4819607 MS.gene20366:CDS 55.0%
GGACCAAGCCAAGAAAGTCC+AGG - chr5.1:4820101-4820120 MS.gene20366:intron 55.0%
GGCCATTGTGAATTCACCGG+AGG - chr5.1:4819138-4819157 MS.gene20366:CDS 55.0%
TAGCGGCTGGTGACCAATCA+GGG + chr5.1:4820283-4820302 None:intergenic 55.0%
TCGTACCGCAAAGTAGCCTC+TGG - chr5.1:4818856-4818875 MS.gene20366:CDS 55.0%
TCTGCTGCAAACTCTGGTCC+TGG - chr5.1:4819543-4819562 MS.gene20366:CDS 55.0%
TGCTCAGGGCTCTCTCACTT+GGG - chr5.1:4820805-4820824 MS.gene20366:CDS 55.0%
TTGCTCAGGGCTCTCTCACT+TGG - chr5.1:4820804-4820823 MS.gene20366:CDS 55.0%
!! TTCCATTTTGCAGGTGGCGG+CGG + chr5.1:4819117-4819136 None:intergenic 55.0%
CGGAACTCACACTGCTGCAG+AGG - chr5.1:4819245-4819264 MS.gene20366:CDS 60.0%
CTGCAGCAGTGTGAGTTCCG+TGG + chr5.1:4819245-4819264 None:intergenic 60.0%
CACACTGCTGCAGAGGCTGC+AGG - chr5.1:4819252-4819271 MS.gene20366:CDS 65.0%
CCAGTATAGGGATCCCGCCG+AGG + chr5.1:4820343-4820362 None:intergenic 65.0%
CCTCGGCGGGATCCCTATAC+TGG - chr5.1:4820340-4820359 MS.gene20366:CDS 65.0%
TGCCGCCGCCACCTGCAAAA+TGG - chr5.1:4819112-4819131 MS.gene20366:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 4818628 4820877 4818628 ID=MS.gene20366
chr5.1 mRNA 4818628 4820877 4818628 ID=MS.gene20366.t1;Parent=MS.gene20366
chr5.1 exon 4820319 4820877 4820319 ID=MS.gene20366.t1.exon1;Parent=MS.gene20366.t1
chr5.1 CDS 4820319 4820877 4820319 ID=cds.MS.gene20366.t1;Parent=MS.gene20366.t1
chr5.1 exon 4818628 4819769 4818628 ID=MS.gene20366.t1.exon2;Parent=MS.gene20366.t1
chr5.1 CDS 4818628 4819769 4818628 ID=cds.MS.gene20366.t1;Parent=MS.gene20366.t1
Gene Sequence

>MS.gene20366

ATGATGAAGATGGAGCTTACATTGCTTGTTAGCCTCATTTTCATGGTATGCAGCATATCAATGTTGGCGGCAGAGGAGAATCTAGAACATGATCAAATGAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCTCTTCAATCAGAAGATTTGCATAGTTGGTACCATTCATTCCTTCCACAAACTTTTCCTCACAAAGAAAGAATGGTTTTCTCGTACCGCAAAGTAGCCTCTGGATTTGCTGTGAAGCTAACACCAGAAGAAGCCAAATCTCTTCAAGCGAAAGGTGAAATTGTGTCAGCAAGACCTGAAAGGACCCTTGAATTACATACAACTCACACTCCAACATTCTTGGGTCTGAAACAAGGACAAGGATTGTGGAGCGACGATAACCTTGGAAAAGGCGTCATAATTGGTATCATAGACTCGGGAATATTCCCTTTACATCCATCTTTCAATGACGAAGGAATGCCGCCGCCACCTGCAAAATGGAAAGGCCATTGTGAATTCACCGGAGGGCAAGTATGCAACAATAAGCTCATAGGTGCAAGAAACATGGTCAAAAATGCAATTCAAGAGCCTCCGTTTGAGAATATCTTCCACGGAACTCACACTGCTGCAGAGGCTGCAGGAAGATTCGTAGAAGATGCAAGTCTTTTTGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCTAATGCTCACATAGCAATGTACAAAGTTTGTGATGATAACATTCGATGCTTTGAAAGTTCTGTCTTAGCGGCAATAGATATAGCTATTGAAGATGGTGTAGATGTTCTTTCACTTTCACTTGGTTTAGGTTCTCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCTACTCAAAATGGTGTTTTTGTTAGTTGCTCTGCTGCAAACTCTGGTCCTGGATACAGCACTCTCTCCAACGAAGCTCCTTGGATCCTCACTGTTGGTGCAAGCACAATTGATAGAAAAATTGTAGCATCAGCAAAGCTAGGAAATGGAAATGAATATGAAGGTGAAACATTATTCCAACCCAAAGATTTTTCTGAACAATTATTACCACTTGTGTATGCAGGCTCATTTGGATTTGGAAACCAGACACAGAATCAGTCTTTGTGTCTTCCAGGATCCTTAAAGAACATCGATCTAAGTGGAAAAGTAGTGTTGTGTGATGTCGGAGGACGTGTTCCAAGCACTGTGAAAGGACAAGAAGTTCTAAATTCAGGTGGTGTTGCTATGATCCTTGCAAATTCAGAAACACTTGGTTTCAACACTTTTGCTTCTGTAAATGTTCTACCTGCGGTTGAAGTGAGTTACAAAGCTGGTTTAACAATCAAAGAATACATAAACTCAACCTACAATCCAACAGCAACATTGATATTCAAAGGAACAGTAATTGGTGATTCTTTAGCTCCTTCTGTTGTTTCATTTTCTTCAAGAGGACCAAGCCAAGAAAGTCCAGGAATTCTTAAACCAGACATCATTGGTCCAGGTGTTAACATTCTAGCTGCATGGGGTGTTTCTGTAGACAACAAAATTCCAGCTTTTAACATTGTTTCCGGCACTTCAATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAATTCTCACCCTGATTGGTCACCAGCCGCTATAAAATCAGCAATCATGACAACTGCAAATACTCTCAACCTCGGCGGGATCCCTATACTGGATCAAAGGCTTTTGCCGGCTGATATTTTCGCTACCGGTGCAGGACATGTTAATCCTGTTAAAGCAAATGATCCCGGTCTTGTTTATGATATTCAACCTGAAGATTATGTTCCTTATTTGTGTGGTTTGGGTTATACTGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGTTCTAATGTGAAAAGTATACCAGAAGCTCAACTGAATTATCCTTCTTTCTCTATTCTGTTGGGGTCAGATTCACAGTATTATACCAGAACCTTGACTAATGTTGGGTTTGCAAATTCAACATATAGAGTTGAACTTGAAGTACCTTTGGCTTTGGGTATGAGTGTTAATCCAAGTGAAATAACATTCACTGAGGTAAATGAGAAGGTTAGTTTCTCTGTTGAATTTATACCACAAATAAAGGAAAACAGAAGGAATCAAACTTTTGCTCAGGGCTCTCTCACTTGGGTGTCTGATAAACATGCTGTTAGGATACCAATATCAGTCATTTTCAAGTGA
Protein sequence

>MS.gene20366.t1

MMKMELTLLVSLIFMVCSISMLAAEENLEHDQMNLMTYIVHVKKSENVASLQSEDLHSWYHSFLPQTFPHKERMVFSYRKVASGFAVKLTPEEAKSLQAKGEIVSARPERTLELHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGIIDSGIFPLHPSFNDEGMPPPPAKWKGHCEFTGGQVCNNKLIGSFGFGNQTQNQSLCLPGSLKNIDLSGKVVLCDVGGRVPSTVKGQEVLNSGGVAMILANSETLGFNTFASVNVLPAVEVSYKAGLTIKEYINSTYNPTATLIFKGTVIGDSLAPSVVSFSSRGPSQESPGILKPDIIGPGVNILAAWGVSVDNKIPAFNIVSGTSMSCPHLSGIAALIKNSHPDWSPAAIKSAIMTTANTLNLGGIPILDQRLLPADIFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLGYTDKEIEVIVQWKVKCSNVKSIPEAQLNYPSFSILLGSDSQYYTRTLTNVGFANSTYRVELEVPLALGMSVNPSEITFTEVNEKVSFSVEFIPQIKENRRNQTFAQGSLTWVSDKHAVRIPISVIFK