Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20449.t1 | KEH25001.1 | 97.1 | 750 | 18 | 2 | 1 | 749 | 72 | 818 | 0.00E+00 | 1446.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20449.t1 | F4KFV7 | 63.5 | 747 | 222 | 5 | 3 | 749 | 74 | 769 | 1.4e-280 | 966.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20449.t1 | A0A072U6K2 | 97.1 | 750 | 18 | 2 | 1 | 749 | 72 | 818 | 0.0e+00 | 1446.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050105 | MS.gene20449 | 0.826408 | 2.76E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene20449 | 0.809207 | 2.12E-50 | -1.69E-46 |
| MS.gene05308 | MS.gene20449 | 0.805032 | 1.62E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene20449 | 0.816381 | 5.69E-52 | -1.69E-46 |
| MS.gene056045 | MS.gene20449 | 0.848146 | 7.38E-60 | -1.69E-46 |
| MS.gene056403 | MS.gene20449 | 0.851679 | 7.59E-61 | -1.69E-46 |
| MS.gene056605 | MS.gene20449 | 0.840953 | 6.37E-58 | -1.69E-46 |
| MS.gene058126 | MS.gene20449 | 0.804131 | 2.50E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene20449 | 0.805958 | 1.04E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20449.t1 | MTR_6g011800 | 96.800 | 750 | 20 | 2 | 1 | 749 | 72 | 818 | 0.0 | 1504 |
| MS.gene20449.t1 | MTR_5g006660 | 42.231 | 502 | 283 | 5 | 220 | 717 | 62 | 560 | 4.57e-136 | 414 |
| MS.gene20449.t1 | MTR_5g006660 | 43.722 | 446 | 246 | 3 | 220 | 662 | 62 | 505 | 9.36e-129 | 393 |
| MS.gene20449.t1 | MTR_3g013660 | 40.314 | 191 | 28 | 4 | 261 | 450 | 200 | 305 | 1.44e-23 | 104 |
| MS.gene20449.t1 | MTR_3g013660 | 35.673 | 171 | 82 | 4 | 545 | 715 | 296 | 438 | 5.21e-16 | 81.6 |
| MS.gene20449.t1 | MTR_3g013680 | 78.000 | 50 | 11 | 0 | 506 | 555 | 21 | 70 | 4.97e-22 | 92.8 |
| MS.gene20449.t1 | MTR_3g013680 | 67.742 | 62 | 20 | 0 | 633 | 694 | 66 | 127 | 1.55e-20 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20449.t1 | AT5G39840 | 63.454 | 747 | 222 | 5 | 3 | 749 | 74 | 769 | 0.0 | 987 |
| MS.gene20449.t1 | AT4G14790 | 44.906 | 481 | 259 | 4 | 220 | 697 | 72 | 549 | 1.02e-139 | 423 |
| MS.gene20449.t1 | AT4G14790 | 44.906 | 481 | 259 | 4 | 220 | 697 | 72 | 549 | 1.02e-139 | 423 |
Find 163 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATGCTTTGCAGAGGTTTA+TGG | 0.145194 | 6.3:-6461374 | MS.gene20449:CDS |
| CGCCACTACTTTGCATTTAG+AGG | 0.149003 | 6.3:-6460594 | MS.gene20449:CDS |
| AATGGGGTTGATTTAGATTA+TGG | 0.179400 | 6.3:-6461985 | MS.gene20449:CDS |
| GTTTGTGGTTTATCTGAAAA+TGG | 0.186433 | 6.3:-6462003 | MS.gene20449:CDS |
| TACTTTGCATTTAGAGGATT+TGG | 0.207111 | 6.3:-6460588 | MS.gene20449:CDS |
| CTGATGAGATCACGAGGTTT+AGG | 0.226357 | 6.3:-6461510 | MS.gene20449:CDS |
| AGAGATATTTGAGGTTAAAT+TGG | 0.244865 | 6.3:-6460900 | MS.gene20449:CDS |
| TTTGGGTCCCTAACATTAAT+AGG | 0.276039 | 6.3:+6460305 | None:intergenic |
| GTTTCTAAAGTATCACTTCT+TGG | 0.278315 | 6.3:+6459960 | None:intergenic |
| AATTCAACCTGCTCATAATA+AGG | 0.291520 | 6.3:+6460506 | None:intergenic |
| TAGGGCGCTCCTTGGTTTGA+TGG | 0.299665 | 6.3:-6461113 | MS.gene20449:CDS |
| TCTTCACTATCTGCAGCTTT+TGG | 0.303007 | 6.3:+6459996 | None:intergenic |
| CCTGCTCATAATAAGGAAAA+AGG | 0.308079 | 6.3:+6460513 | None:intergenic |
| CACGCAACATGATTTGAAAA+TGG | 0.309891 | 6.3:+6461232 | None:intergenic |
| ATGCGGTGATCCTAGTGTTT+TGG | 0.321448 | 6.3:-6461074 | MS.gene20449:CDS |
| GTTTATTGTAGTCTGTTAAC+TGG | 0.321595 | 6.3:-6461274 | MS.gene20449:CDS |
| TGATGAGATCACGAGGTTTA+GGG | 0.327210 | 6.3:-6461509 | MS.gene20449:CDS |
| TCATTCCGTGCCGAACCTTT+TGG | 0.332109 | 6.3:+6460209 | None:intergenic |
| AATCTTGAAAATATTAAGTC+TGG | 0.338087 | 6.3:-6460950 | MS.gene20449:CDS |
| GCTTGGGCTTTCTCCGCATA+TGG | 0.341027 | 6.3:+6460101 | None:intergenic |
| AATATGTTAGAGAGGATTCC+AGG | 0.342205 | 6.3:-6460365 | MS.gene20449:CDS |
| CGACGGCTGCACACAAGTTT+CGG | 0.346925 | 6.3:-6461654 | MS.gene20449:CDS |
| TGAGCTAAAGAATGTGAAAA+AGG | 0.348104 | 6.3:-6461794 | MS.gene20449:CDS |
| CATAAATGTTGTGTGATATA+CGG | 0.348744 | 6.3:-6460857 | MS.gene20449:CDS |
| CTCAGATTTGCTACAGCGTT+TGG | 0.361282 | 6.3:-6460266 | MS.gene20449:CDS |
| CTCCTCGCCGTCTGTCGAAA+AGG | 0.364898 | 6.3:+6462116 | None:intergenic |
| AAACAAAACTCAACAAATAT+AGG | 0.370786 | 6.3:+6461544 | None:intergenic |
| AAATCACCCTTCGAATGTTA+AGG | 0.371191 | 6.3:+6460729 | None:intergenic |
| TTTGTGGTTTATCTGAAAAT+GGG | 0.373990 | 6.3:-6462002 | MS.gene20449:CDS |
| GTCCATGCATAACCTCTATA+CGG | 0.378596 | 6.3:+6461136 | None:intergenic |
| GGGTGGTAAAGAAGCTGATT+TGG | 0.384062 | 6.3:-6462094 | MS.gene20449:CDS |
| TCACTTCTTGGTTCTGTTTG+CGG | 0.398212 | 6.3:+6459972 | None:intergenic |
| AGTAAGTGGTACATAGCCTT+TGG | 0.404980 | 6.3:+6460287 | None:intergenic |
| CAATATCCGCAGCCATTGCT+TGG | 0.406160 | 6.3:+6460084 | None:intergenic |
| TTGTAGTCCACTTAGATTGT+TGG | 0.411405 | 6.3:-6461332 | MS.gene20449:CDS |
| AGCTCACCATACAATTCAAT+AGG | 0.417222 | 6.3:+6461811 | None:intergenic |
| GGAAGATAATTTATCATTGT+GGG | 0.422388 | 6.3:-6461420 | MS.gene20449:CDS |
| ACTACAATAAATCCCCTTCT+TGG | 0.423063 | 6.3:+6461348 | None:intergenic |
| ACCTCACGATGCCTCATACT+TGG | 0.424023 | 6.3:-6461468 | MS.gene20449:CDS |
| GTTATCAAACCACTTTGATA+AGG | 0.427774 | 6.3:-6460132 | MS.gene20449:CDS |
| AGAAGTACGATCCGTCTAAA+CGG | 0.433317 | 6.3:+6460420 | None:intergenic |
| CATTGTGGGCCTACTAATAG+TGG | 0.437464 | 6.3:-6461406 | MS.gene20449:CDS |
| GCTTGCTGCCTACGAGTCTC+TGG | 0.437692 | 6.3:+6460824 | None:intergenic |
| CGAATTTGAGCTTGGAAATG+AGG | 0.438413 | 6.3:-6462037 | MS.gene20449:CDS |
| CTTTCGCAAGGGCGATGAAA+AGG | 0.442711 | 6.3:-6461441 | MS.gene20449:CDS |
| TTAACCTGTGACGCTGGAAC+AGG | 0.449417 | 6.3:+6460668 | None:intergenic |
| TCACAGGTTAAGCAAATTGC+GGG | 0.451273 | 6.3:-6460656 | MS.gene20449:CDS |
| GTCGAAGCAAAGACCTTGCT+TGG | 0.456428 | 6.3:-6460974 | MS.gene20449:CDS |
| AATCTCTTAGAAAAGCTGAT+TGG | 0.457428 | 6.3:-6460046 | MS.gene20449:CDS |
| AGCTGGCTGAATGTCATGTT+AGG | 0.462854 | 6.3:+6460467 | None:intergenic |
| TCCTCGCCGTCTGTCGAAAA+GGG | 0.463120 | 6.3:+6462117 | None:intergenic |
| AGCTAGTGATGCAGTGGGGA+TGG | 0.463476 | 6.3:-6460759 | MS.gene20449:CDS |
| GCTAAGTACTTGATTTCGCT+TGG | 0.465093 | 6.3:-6461598 | MS.gene20449:CDS |
| TAAGTCTTACCACTATTAGT+AGG | 0.465463 | 6.3:+6461397 | None:intergenic |
| TCCACTTAGATTGTTGGCTA+TGG | 0.466760 | 6.3:-6461326 | MS.gene20449:CDS |
| AATATCCGCAGCCATTGCTT+GGG | 0.467472 | 6.3:+6460085 | None:intergenic |
| AAGTGTTATCTTCGTATATG+TGG | 0.470307 | 6.3:-6460154 | MS.gene20449:CDS |
| TGCTACAGCGTTTGGTCAGA+AGG | 0.470624 | 6.3:-6460258 | MS.gene20449:CDS |
| GTCTGTCGAAAAGGGTCTGA+TGG | 0.473032 | 6.3:+6462125 | None:intergenic |
| TATGGGCATGCCAAAAGGTT+CGG | 0.474123 | 6.3:-6460219 | MS.gene20449:CDS |
| AAAGTAGTGGCGAGTCCATC+GGG | 0.475445 | 6.3:+6460605 | None:intergenic |
| TTTGATCATGTGACGAAGGT+TGG | 0.479768 | 6.3:-6460536 | MS.gene20449:CDS |
| TCTTCCTGTTCCAGCGTCAC+AGG | 0.481294 | 6.3:-6460672 | MS.gene20449:CDS |
| ACTGTGTTGTTGCCTTCTCA+AGG | 0.482486 | 6.3:-6460925 | MS.gene20449:CDS |
| GTAAGTGGTACATAGCCTTT+GGG | 0.489138 | 6.3:+6460288 | None:intergenic |
| GATCACGAGGTTTAGGGAGA+TGG | 0.492949 | 6.3:-6461503 | MS.gene20449:CDS |
| TTTGGATACCGAAATCGAAA+AGG | 0.493121 | 6.3:-6462076 | MS.gene20449:CDS |
| CGTGATCCTATTGAATTGTA+TGG | 0.494706 | 6.3:-6461817 | MS.gene20449:CDS |
| ATAGAGGTTATGCATGGACT+AGG | 0.495487 | 6.3:-6461132 | MS.gene20449:CDS |
| AAGCAAATTGCGGGAAGAGC+TGG | 0.496219 | 6.3:-6460647 | MS.gene20449:CDS |
| GAAAATGACGAATTTGAGCT+TGG | 0.496219 | 6.3:-6462045 | MS.gene20449:CDS |
| CTGATTGGAAACCTGAATCA+AGG | 0.497149 | 6.3:-6460031 | MS.gene20449:CDS |
| ATCTTGAAAATATTAAGTCT+GGG | 0.497495 | 6.3:-6460949 | MS.gene20449:CDS |
| GGCGAAAATTGCCGTTTAGA+CGG | 0.499612 | 6.3:-6460431 | MS.gene20449:CDS |
| ATACTTGGTTTCCTTTCGCA+AGG | 0.499713 | 6.3:-6461453 | MS.gene20449:CDS |
| ATTTGCTTAACCTGTGACGC+TGG | 0.501121 | 6.3:+6460662 | None:intergenic |
| TGTTGCGTGTACTGTTGAAA+TGG | 0.502458 | 6.3:-6461218 | MS.gene20449:CDS |
| TGTTGAAATGGCTTCGACGC+AGG | 0.505870 | 6.3:-6461206 | MS.gene20449:CDS |
| TGTCACCGTTGTACTTTGAA+AGG | 0.505985 | 6.3:+6460699 | None:intergenic |
| GAGGTTTATGGAGGCCAAGA+AGG | 0.511686 | 6.3:-6461362 | MS.gene20449:CDS |
| CAAGCACTTGCTATGTACAT+TGG | 0.512270 | 6.3:-6461691 | MS.gene20449:CDS |
| GCTAGTGATGCAGTGGGGAT+GGG | 0.512637 | 6.3:-6460758 | MS.gene20449:CDS |
| GATGCCTACTCTCAAGGTCT+AGG | 0.516001 | 6.3:+6460177 | None:intergenic |
| AACCTTCGTCACATGATCAA+AGG | 0.516882 | 6.3:+6460538 | None:intergenic |
| GCATGGACTAGGGCGCTCCT+TGG | 0.519232 | 6.3:-6461121 | MS.gene20449:CDS |
| CTCAAGGAGAGAGATATTTG+AGG | 0.519831 | 6.3:-6460909 | MS.gene20449:CDS |
| GGTTCCCGTCAACATAGCTA+TGG | 0.519871 | 6.3:-6460237 | MS.gene20449:CDS |
| GCGAAAGGAAACCAAGTATG+AGG | 0.520109 | 6.3:+6461457 | None:intergenic |
| AGGAAGATAATTTATCATTG+TGG | 0.520636 | 6.3:-6461421 | MS.gene20449:CDS |
| TTTGATAAAGTTAATGCGAA+GGG | 0.525030 | 6.3:-6461298 | MS.gene20449:CDS |
| ACCTTCGTCACATGATCAAA+GGG | 0.527520 | 6.3:+6460539 | None:intergenic |
| GTCTTTGCTTCGACTACCAA+CGG | 0.529487 | 6.3:+6460983 | None:intergenic |
| TCCATAGCCAACAATCTAAG+TGG | 0.531855 | 6.3:+6461325 | None:intergenic |
| CTGTAGCAAATCTGAGTAAG+TGG | 0.532663 | 6.3:+6460273 | None:intergenic |
| CAAAGTAGTGGCGAGTCCAT+CGG | 0.535024 | 6.3:+6460604 | None:intergenic |
| GACTTAACCTTAACATTCGA+AGG | 0.537753 | 6.3:-6460736 | MS.gene20449:CDS |
| TGTTGATGAAATTCAGATGA+TGG | 0.541284 | 6.3:-6461164 | MS.gene20449:CDS |
| TGATTGGAAACCTGAATCAA+GGG | 0.542310 | 6.3:-6460030 | MS.gene20449:CDS |
| ATAGCTATGGGCATGCCAAA+AGG | 0.544361 | 6.3:-6460224 | MS.gene20449:CDS |
| TTGGATACCGAAATCGAAAA+GGG | 0.548886 | 6.3:-6462075 | MS.gene20449:CDS |
| CTAGTAGCTAGTGATGCAGT+GGG | 0.549522 | 6.3:-6460764 | MS.gene20449:CDS |
| AAGTACTTAGCAACATCCTC+AGG | 0.552618 | 6.3:+6461610 | None:intergenic |
| TGTCATGTTAGGAAGTTGTC+CGG | 0.552888 | 6.3:+6460478 | None:intergenic |
| AGGTTTATGGAGGCCAAGAA+GGG | 0.554612 | 6.3:-6461361 | MS.gene20449:CDS |
| ACACTTGATGCCTACTCTCA+AGG | 0.556313 | 6.3:+6460171 | None:intergenic |
| CGAAACTTGTGTGCAGCCGT+CGG | 0.563294 | 6.3:+6461655 | None:intergenic |
| ATGATGGCAGATCCGTATAG+AGG | 0.564432 | 6.3:-6461148 | MS.gene20449:CDS |
| CATGCCCATAGCTATGTTGA+CGG | 0.564488 | 6.3:+6460232 | None:intergenic |
| TACTTGGTTTCCTTTCGCAA+GGG | 0.565193 | 6.3:-6461452 | MS.gene20449:CDS |
| TATTGTTCGAAAGATCTGTC+AGG | 0.565663 | 6.3:-6461050 | MS.gene20449:CDS |
| CGAACAATATCCAAAACACT+AGG | 0.566130 | 6.3:+6461064 | None:intergenic |
| GTTTAGGGAGATGGTTAAGT+CGG | 0.566876 | 6.3:-6461494 | MS.gene20449:CDS |
| TTATGAGAGGTTCAAACCGT+TGG | 0.572805 | 6.3:-6460999 | MS.gene20449:CDS |
| CGTTCTTCTAAAGATAACCC+TGG | 0.576183 | 6.3:+6460347 | None:intergenic |
| AAATATCTCTCTCCTTGAGA+AGG | 0.578653 | 6.3:+6460913 | None:intergenic |
| GAGCAGGTTGAATTGTTCGC+CGG | 0.580196 | 6.3:-6460497 | MS.gene20449:CDS |
| TCTGTCGAAAAGGGTCTGAT+GGG | 0.589281 | 6.3:+6462126 | None:intergenic |
| ATGCCCATAGCTATGTTGAC+GGG | 0.589477 | 6.3:+6460233 | None:intergenic |
| AGAGGATGCGTTTATCCCGA+TGG | 0.589900 | 6.3:-6460620 | MS.gene20449:CDS |
| GTTCCCGTCAACATAGCTAT+GGG | 0.591036 | 6.3:-6460236 | MS.gene20449:CDS |
| CTTTGCCGCCAGAGACTCGT+AGG | 0.591784 | 6.3:-6460832 | MS.gene20449:CDS |
| GTCACAGGTTAAGCAAATTG+CGG | 0.592786 | 6.3:-6460657 | MS.gene20449:CDS |
| TCGACAGACGGCGAGGAGGG+TGG | 0.593855 | 6.3:-6462111 | MS.gene20449:CDS |
| TGCTTTGCAGAGGTTTATGG+AGG | 0.594143 | 6.3:-6461371 | MS.gene20449:CDS |
| AACTTCACAGCCTCATCACA+CGG | 0.595912 | 6.3:+6461574 | None:intergenic |
| TTGTGGTTTATCTGAAAATG+GGG | 0.596491 | 6.3:-6462001 | MS.gene20449:CDS |
| CGAAAGATCTGTCAGGACAC+AGG | 0.599227 | 6.3:-6461043 | MS.gene20449:CDS |
| GAGGTTAGTGATGATGTTTG+TGG | 0.599324 | 6.3:-6462018 | MS.gene20449:CDS |
| ATCCGTATAGAGGTTATGCA+TGG | 0.601176 | 6.3:-6461138 | MS.gene20449:CDS |
| TCTAGTAGCTAGTGATGCAG+TGG | 0.601178 | 6.3:-6460765 | MS.gene20449:CDS |
| TGTATGAGCAACATTATGAG+AGG | 0.602846 | 6.3:-6461012 | MS.gene20449:CDS |
| TAGAGGTTATGCATGGACTA+GGG | 0.603502 | 6.3:-6461131 | MS.gene20449:CDS |
| TGCGGAGAAAGCCCAAGCAA+TGG | 0.607866 | 6.3:-6460096 | MS.gene20449:CDS |
| TGAATTAGAGAATAAGAGTG+AGG | 0.608109 | 6.3:-6461866 | MS.gene20449:CDS |
| TTCGCTTGGACCGTGTGATG+AGG | 0.608344 | 6.3:-6461584 | MS.gene20449:CDS |
| ATCCTCTAAATGCAAAGTAG+TGG | 0.614457 | 6.3:+6460592 | None:intergenic |
| TCTTGAAAATATTAAGTCTG+GGG | 0.614594 | 6.3:-6460948 | MS.gene20449:CDS |
| GAAAGCCCAAGCAATGGCTG+CGG | 0.619923 | 6.3:-6460090 | MS.gene20449:CDS |
| AGACTTATAATGCTTTGCAG+AGG | 0.624269 | 6.3:-6461381 | MS.gene20449:CDS |
| TATTAATGTTAGGGACCCAA+AGG | 0.625322 | 6.3:-6460303 | MS.gene20449:CDS |
| TTTCATGAAGAGATGTCCTG+AGG | 0.627444 | 6.3:-6461626 | MS.gene20449:CDS |
| GCGGGAAGAGCTGGTCGAAG+AGG | 0.627965 | 6.3:-6460638 | MS.gene20449:CDS |
| AATAACCTTTCAAAGTACAA+CGG | 0.629236 | 6.3:-6460704 | MS.gene20449:CDS |
| AAATCTCTAATATGTTAGAG+AGG | 0.629524 | 6.3:-6460373 | MS.gene20449:CDS |
| TGCTGCCTACGAGTCTCTGG+CGG | 0.631805 | 6.3:+6460827 | None:intergenic |
| GCCCTTTGATCATGTGACGA+AGG | 0.633566 | 6.3:-6460540 | MS.gene20449:CDS |
| GACGCAGGAATTGTATGATG+TGG | 0.634789 | 6.3:-6461191 | MS.gene20449:CDS |
| ATATGTTAGAGAGGATTCCA+GGG | 0.634854 | 6.3:-6460364 | MS.gene20449:CDS |
| AGTAATAGCAGTAGTAGTAG+CGG | 0.641546 | 6.3:-6461919 | MS.gene20449:CDS |
| ACTTAACCTTAACATTCGAA+GGG | 0.642077 | 6.3:-6460735 | MS.gene20449:CDS |
| ACCGAAATCGAAAAGGGTGT+CGG | 0.645146 | 6.3:-6462069 | MS.gene20449:CDS |
| GATTGGAAACCTGAATCAAG+GGG | 0.646215 | 6.3:-6460029 | MS.gene20449:CDS |
| AAAGTTGACTAGAGATGAGG+TGG | 0.651924 | 6.3:-6461767 | MS.gene20449:CDS |
| GGTTTATGGAGGCCAAGAAG+GGG | 0.652105 | 6.3:-6461360 | MS.gene20449:CDS |
| TGCAAAGTTGACTAGAGATG+AGG | 0.657577 | 6.3:-6461770 | MS.gene20449:CDS |
| TATACTTTAACAAGAGACTG+TGG | 0.658136 | 6.3:+6459912 | None:intergenic |
| AACTCCTAGACCTTGAGAGT+AGG | 0.660909 | 6.3:-6460181 | MS.gene20449:CDS |
| GCATGCCAAAAGGTTCGGCA+CGG | 0.665339 | 6.3:-6460214 | MS.gene20449:CDS |
| ACCAAGTATGAGGCATCGTG+AGG | 0.673223 | 6.3:+6461467 | None:intergenic |
| TCTCGTCAGCCATCAAACCA+AGG | 0.682314 | 6.3:+6461104 | None:intergenic |
| GCTGACGAGATACATTTATG+CGG | 0.748217 | 6.3:-6461091 | MS.gene20449:CDS |
| ATTGGAAACCTGAATCAAGG+GGG | 0.765884 | 6.3:-6460028 | MS.gene20449:CDS |
| TAGTAGCTAGTGATGCAGTG+GGG | 0.766296 | 6.3:-6460763 | MS.gene20449:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAAACTCAACAAATAT+AGG | + | chr6.3:6460490-6460509 | None:intergenic | 20.0% |
| !! | AATCTTGAAAATATTAAGTC+TGG | - | chr6.3:6461081-6461100 | MS.gene20449:CDS | 20.0% |
| !! | ATCTTGAAAATATTAAGTCT+GGG | - | chr6.3:6461082-6461101 | MS.gene20449:CDS | 20.0% |
| !!! | TATATTTGTTGAGTTTTGTT+TGG | - | chr6.3:6460489-6460508 | MS.gene20449:CDS | 20.0% |
| ! | AAATCTCTAATATGTTAGAG+AGG | - | chr6.3:6461658-6461677 | MS.gene20449:CDS | 25.0% |
| ! | AATAACCTTTCAAAGTACAA+CGG | - | chr6.3:6461327-6461346 | MS.gene20449:CDS | 25.0% |
| ! | AGGAAGATAATTTATCATTG+TGG | - | chr6.3:6460610-6460629 | MS.gene20449:CDS | 25.0% |
| ! | CATAAATGTTGTGTGATATA+CGG | - | chr6.3:6461174-6461193 | MS.gene20449:CDS | 25.0% |
| ! | GGAAGATAATTTATCATTGT+GGG | - | chr6.3:6460611-6460630 | MS.gene20449:CDS | 25.0% |
| ! | TAAGGAAAAATTTCCATATG+CGG | - | chr6.3:6461917-6461936 | MS.gene20449:CDS | 25.0% |
| ! | TCTTGAAAATATTAAGTCTG+GGG | - | chr6.3:6461083-6461102 | MS.gene20449:CDS | 25.0% |
| ! | TTTGATAAAGTTAATGCGAA+GGG | - | chr6.3:6460733-6460752 | MS.gene20449:CDS | 25.0% |
| ! | TTTGTGGTTTATCTGAAAAT+GGG | - | chr6.3:6460029-6460048 | MS.gene20449:CDS | 25.0% |
| !! | AGAGATATTTGAGGTTAAAT+TGG | - | chr6.3:6461131-6461150 | MS.gene20449:CDS | 25.0% |
| !! | GAAATTTTTCCTTATCAAAG+TGG | + | chr6.3:6461911-6461930 | None:intergenic | 25.0% |
| !! | GTTTCATCATTTTGCAAAAT+CGG | - | chr6.3:6460303-6460322 | MS.gene20449:CDS | 25.0% |
| !! | TTTCATCATTTTGCAAAATC+GGG | - | chr6.3:6460304-6460323 | MS.gene20449:CDS | 25.0% |
| !! | TTTTGATAAAGTTAATGCGA+AGG | - | chr6.3:6460732-6460751 | MS.gene20449:CDS | 25.0% |
| !! | TTTTGCTCCTATTAATGTTA+GGG | - | chr6.3:6461719-6461738 | MS.gene20449:CDS | 25.0% |
| AAGTGTTATCTTCGTATATG+TGG | - | chr6.3:6461877-6461896 | MS.gene20449:CDS | 30.0% | |
| AATCTCTTAGAAAAGCTGAT+TGG | - | chr6.3:6461985-6462004 | MS.gene20449:CDS | 30.0% | |
| AATTCAACCTGCTCATAATA+AGG | + | chr6.3:6461528-6461547 | None:intergenic | 30.0% | |
| ACTTAACCTTAACATTCGAA+GGG | - | chr6.3:6461296-6461315 | MS.gene20449:CDS | 30.0% | |
| GAGCTAAAGAATGTGAAAAA+GGG | - | chr6.3:6460238-6460257 | MS.gene20449:CDS | 30.0% | |
| GTTATCAAACCACTTTGATA+AGG | - | chr6.3:6461899-6461918 | MS.gene20449:CDS | 30.0% | |
| GTTTATTGTAGTCTGTTAAC+TGG | - | chr6.3:6460757-6460776 | MS.gene20449:CDS | 30.0% | |
| GTTTGTGGTTTATCTGAAAA+TGG | - | chr6.3:6460028-6460047 | MS.gene20449:CDS | 30.0% | |
| TAAGTCTTACCACTATTAGT+AGG | + | chr6.3:6460637-6460656 | None:intergenic | 30.0% | |
| TACTTTGCATTTAGAGGATT+TGG | - | chr6.3:6461443-6461462 | MS.gene20449:CDS | 30.0% | |
| TATACTTTAACAAGAGACTG+TGG | + | chr6.3:6462122-6462141 | None:intergenic | 30.0% | |
| TGAATTAGAGAATAAGAGTG+AGG | - | chr6.3:6460165-6460184 | MS.gene20449:CDS | 30.0% | |
| TGAGCTAAAGAATGTGAAAA+AGG | - | chr6.3:6460237-6460256 | MS.gene20449:CDS | 30.0% | |
| TTGTGGTTTATCTGAAAATG+GGG | - | chr6.3:6460030-6460049 | MS.gene20449:CDS | 30.0% | |
| ! | AATGGGGTTGATTTAGATTA+TGG | - | chr6.3:6460046-6460065 | MS.gene20449:CDS | 30.0% |
| ! | GTTTTGCTCCTATTAATGTT+AGG | - | chr6.3:6461718-6461737 | MS.gene20449:CDS | 30.0% |
| ! | TGTTGATGAAATTCAGATGA+TGG | - | chr6.3:6460867-6460886 | MS.gene20449:CDS | 30.0% |
| !! | AGCCAGCTTTTAGAAAAATT+CGG | - | chr6.3:6461579-6461598 | MS.gene20449:CDS | 30.0% |
| !! | ATTTTCAAGATTTCCAAGCA+AGG | + | chr6.3:6461073-6461092 | None:intergenic | 30.0% |
| !! | GTTTCTAAAGTATCACTTCT+TGG | + | chr6.3:6462074-6462093 | None:intergenic | 30.0% |
| AAATATCTCTCTCCTTGAGA+AGG | + | chr6.3:6461121-6461140 | None:intergenic | 35.0% | |
| AAATCACCCTTCGAATGTTA+AGG | + | chr6.3:6461305-6461324 | None:intergenic | 35.0% | |
| AATATGTTAGAGAGGATTCC+AGG | - | chr6.3:6461666-6461685 | MS.gene20449:CDS | 35.0% | |
| ACTACAATAAATCCCCTTCT+TGG | + | chr6.3:6460686-6460705 | None:intergenic | 35.0% | |
| AGACTTATAATGCTTTGCAG+AGG | - | chr6.3:6460650-6460669 | MS.gene20449:CDS | 35.0% | |
| AGCTCACCATACAATTCAAT+AGG | + | chr6.3:6460223-6460242 | None:intergenic | 35.0% | |
| AGTAATAGCAGTAGTAGTAG+CGG | - | chr6.3:6460112-6460131 | MS.gene20449:CDS | 35.0% | |
| ATATGTTAGAGAGGATTCCA+GGG | - | chr6.3:6461667-6461686 | MS.gene20449:CDS | 35.0% | |
| ATCCTCTAAATGCAAAGTAG+TGG | + | chr6.3:6461442-6461461 | None:intergenic | 35.0% | |
| CACGCAACATGATTTGAAAA+TGG | + | chr6.3:6460802-6460821 | None:intergenic | 35.0% | |
| CCTGCTCATAATAAGGAAAA+AGG | + | chr6.3:6461521-6461540 | None:intergenic | 35.0% | |
| CGAACAATATCCAAAACACT+AGG | + | chr6.3:6460970-6460989 | None:intergenic | 35.0% | |
| CGTGATCCTATTGAATTGTA+TGG | - | chr6.3:6460214-6460233 | MS.gene20449:CDS | 35.0% | |
| GAAAATGACGAATTTGAGCT+TGG | - | chr6.3:6459986-6460005 | MS.gene20449:CDS | 35.0% | |
| GACTTAACCTTAACATTCGA+AGG | - | chr6.3:6461295-6461314 | MS.gene20449:CDS | 35.0% | |
| TAATGCTTTGCAGAGGTTTA+TGG | - | chr6.3:6460657-6460676 | MS.gene20449:CDS | 35.0% | |
| TATTAATGTTAGGGACCCAA+AGG | - | chr6.3:6461728-6461747 | MS.gene20449:CDS | 35.0% | |
| TATTGTTCGAAAGATCTGTC+AGG | - | chr6.3:6460981-6461000 | MS.gene20449:CDS | 35.0% | |
| TGATTGGAAACCTGAATCAA+GGG | - | chr6.3:6462001-6462020 | MS.gene20449:CDS | 35.0% | |
| TGTATGAGCAACATTATGAG+AGG | - | chr6.3:6461019-6461038 | MS.gene20449:CDS | 35.0% | |
| TTGGATACCGAAATCGAAAA+GGG | - | chr6.3:6459956-6459975 | MS.gene20449:CDS | 35.0% | |
| TTGTAGTCCACTTAGATTGT+TGG | - | chr6.3:6460699-6460718 | MS.gene20449:CDS | 35.0% | |
| TTTGGATACCGAAATCGAAA+AGG | - | chr6.3:6459955-6459974 | MS.gene20449:CDS | 35.0% | |
| TTTGGGTCCCTAACATTAAT+AGG | + | chr6.3:6461729-6461748 | None:intergenic | 35.0% | |
| ! | ATCATTTTGCAAAATCGGGT+TGG | - | chr6.3:6460308-6460327 | MS.gene20449:CDS | 35.0% |
| ! | ATTTTACTGATGAGATCACG+AGG | - | chr6.3:6460515-6460534 | MS.gene20449:CDS | 35.0% |
| ! | CCTTTTTCCTTATTATGAGC+AGG | - | chr6.3:6461518-6461537 | MS.gene20449:CDS | 35.0% |
| ! | TCATTTTGCAAAATCGGGTT+GGG | - | chr6.3:6460309-6460328 | MS.gene20449:CDS | 35.0% |
| !! | TGGTTTGTCTTTTTATCCGA+CGG | - | chr6.3:6460360-6460379 | MS.gene20449:CDS | 35.0% |
| AAAGTTGACTAGAGATGAGG+TGG | - | chr6.3:6460264-6460283 | MS.gene20449:CDS | 40.0% | |
| AACCTTCGTCACATGATCAA+AGG | + | chr6.3:6461496-6461515 | None:intergenic | 40.0% | |
| AAGTACTTAGCAACATCCTC+AGG | + | chr6.3:6460424-6460443 | None:intergenic | 40.0% | |
| ACCTTCGTCACATGATCAAA+GGG | + | chr6.3:6461495-6461514 | None:intergenic | 40.0% | |
| AGTAAGTGGTACATAGCCTT+TGG | + | chr6.3:6461747-6461766 | None:intergenic | 40.0% | |
| ATACTTGGTTTCCTTTCGCA+AGG | - | chr6.3:6460578-6460597 | MS.gene20449:CDS | 40.0% | |
| ATAGAGGTTATGCATGGACT+AGG | - | chr6.3:6460899-6460918 | MS.gene20449:CDS | 40.0% | |
| ATCCGTATAGAGGTTATGCA+TGG | - | chr6.3:6460893-6460912 | MS.gene20449:CDS | 40.0% | |
| ATTGGAAACCTGAATCAAGG+GGG | - | chr6.3:6462003-6462022 | MS.gene20449:CDS | 40.0% | |
| CGAATTTGAGCTTGGAAATG+AGG | - | chr6.3:6459994-6460013 | MS.gene20449:CDS | 40.0% | |
| CTCAAGGAGAGAGATATTTG+AGG | - | chr6.3:6461122-6461141 | MS.gene20449:CDS | 40.0% | |
| CTGATTGGAAACCTGAATCA+AGG | - | chr6.3:6462000-6462019 | MS.gene20449:CDS | 40.0% | |
| CTGTAGCAAATCTGAGTAAG+TGG | + | chr6.3:6461761-6461780 | None:intergenic | 40.0% | |
| GATTGGAAACCTGAATCAAG+GGG | - | chr6.3:6462002-6462021 | MS.gene20449:CDS | 40.0% | |
| GCTAAGTACTTGATTTCGCT+TGG | - | chr6.3:6460433-6460452 | MS.gene20449:CDS | 40.0% | |
| GCTGACGAGATACATTTATG+CGG | - | chr6.3:6460940-6460959 | MS.gene20449:CDS | 40.0% | |
| GTAAGTGGTACATAGCCTTT+GGG | + | chr6.3:6461746-6461765 | None:intergenic | 40.0% | |
| GTCACAGGTTAAGCAAATTG+CGG | - | chr6.3:6461374-6461393 | MS.gene20449:CDS | 40.0% | |
| GTCCATGCATAACCTCTATA+CGG | + | chr6.3:6460898-6460917 | None:intergenic | 40.0% | |
| GTTTAGGGAGATGGTTAAGT+CGG | - | chr6.3:6460537-6460556 | MS.gene20449:CDS | 40.0% | |
| TACTTGGTTTCCTTTCGCAA+GGG | - | chr6.3:6460579-6460598 | MS.gene20449:CDS | 40.0% | |
| TCACAGGTTAAGCAAATTGC+GGG | - | chr6.3:6461375-6461394 | MS.gene20449:CDS | 40.0% | |
| TCCATAGCCAACAATCTAAG+TGG | + | chr6.3:6460709-6460728 | None:intergenic | 40.0% | |
| TGATGAGATCACGAGGTTTA+GGG | - | chr6.3:6460522-6460541 | MS.gene20449:CDS | 40.0% | |
| TGCAAAGTTGACTAGAGATG+AGG | - | chr6.3:6460261-6460280 | MS.gene20449:CDS | 40.0% | |
| TGTCACCGTTGTACTTTGAA+AGG | + | chr6.3:6461335-6461354 | None:intergenic | 40.0% | |
| TGTCATGTTAGGAAGTTGTC+CGG | + | chr6.3:6461556-6461575 | None:intergenic | 40.0% | |
| TGTTGCGTGTACTGTTGAAA+TGG | - | chr6.3:6460813-6460832 | MS.gene20449:CDS | 40.0% | |
| TTATGAGAGGTTCAAACCGT+TGG | - | chr6.3:6461032-6461051 | MS.gene20449:CDS | 40.0% | |
| TTTCATGAAGAGATGTCCTG+AGG | - | chr6.3:6460405-6460424 | MS.gene20449:CDS | 40.0% | |
| TTTGATCATGTGACGAAGGT+TGG | - | chr6.3:6461495-6461514 | MS.gene20449:CDS | 40.0% | |
| ! | AGAAGTACGATCCGTCTAAA+CGG | + | chr6.3:6461614-6461633 | None:intergenic | 40.0% |
| ! | CGTTCTTCTAAAGATAACCC+TGG | + | chr6.3:6461687-6461706 | None:intergenic | 40.0% |
| ! | GAGGTTAGTGATGATGTTTG+TGG | - | chr6.3:6460013-6460032 | MS.gene20449:CDS | 40.0% |
| ! | TAGAGGTTATGCATGGACTA+GGG | - | chr6.3:6460900-6460919 | MS.gene20449:CDS | 40.0% |
| ! | TCCACTTAGATTGTTGGCTA+TGG | - | chr6.3:6460705-6460724 | MS.gene20449:CDS | 40.0% |
| ! | TCTTCACTATCTGCAGCTTT+TGG | + | chr6.3:6462038-6462057 | None:intergenic | 40.0% |
| !! | CAAGCACTTGCTATGTACAT+TGG | - | chr6.3:6460340-6460359 | MS.gene20449:CDS | 40.0% |
| !! | CGCCGAATTTTTCTAAAAGC+TGG | + | chr6.3:6461584-6461603 | None:intergenic | 40.0% |
| !! | TCACTTCTTGGTTCTGTTTG+CGG | + | chr6.3:6462062-6462081 | None:intergenic | 40.0% |
| AACTCCTAGACCTTGAGAGT+AGG | - | chr6.3:6461850-6461869 | MS.gene20449:CDS | 45.0% | |
| AACTTCACAGCCTCATCACA+CGG | + | chr6.3:6460460-6460479 | None:intergenic | 45.0% | |
| AATATCCGCAGCCATTGCTT+GGG | + | chr6.3:6461949-6461968 | None:intergenic | 45.0% | |
| ACACTTGATGCCTACTCTCA+AGG | + | chr6.3:6461863-6461882 | None:intergenic | 45.0% | |
| AGCTGGCTGAATGTCATGTT+AGG | + | chr6.3:6461567-6461586 | None:intergenic | 45.0% | |
| AGGTTTATGGAGGCCAAGAA+GGG | - | chr6.3:6460670-6460689 | MS.gene20449:CDS | 45.0% | |
| ATAGCTATGGGCATGCCAAA+AGG | - | chr6.3:6461807-6461826 | MS.gene20449:CDS | 45.0% | |
| ATGATGGCAGATCCGTATAG+AGG | - | chr6.3:6460883-6460902 | MS.gene20449:CDS | 45.0% | |
| ATGCCCATAGCTATGTTGAC+GGG | + | chr6.3:6461801-6461820 | None:intergenic | 45.0% | |
| ATTTGCTTAACCTGTGACGC+TGG | + | chr6.3:6461372-6461391 | None:intergenic | 45.0% | |
| CATGCCCATAGCTATGTTGA+CGG | + | chr6.3:6461802-6461821 | None:intergenic | 45.0% | |
| CATTGTGGGCCTACTAATAG+TGG | - | chr6.3:6460625-6460644 | MS.gene20449:CDS | 45.0% | |
| CGCCACTACTTTGCATTTAG+AGG | - | chr6.3:6461437-6461456 | MS.gene20449:CDS | 45.0% | |
| CTAGTAGCTAGTGATGCAGT+GGG | - | chr6.3:6461267-6461286 | MS.gene20449:CDS | 45.0% | |
| CTGATGAGATCACGAGGTTT+AGG | - | chr6.3:6460521-6460540 | MS.gene20449:CDS | 45.0% | |
| GACGCAGGAATTGTATGATG+TGG | - | chr6.3:6460840-6460859 | MS.gene20449:CDS | 45.0% | |
| GCGAAAGGAAACCAAGTATG+AGG | + | chr6.3:6460577-6460596 | None:intergenic | 45.0% | |
| GGGTGGTAAAGAAGCTGATT+TGG | - | chr6.3:6459937-6459956 | MS.gene20449:CDS | 45.0% | |
| GTCTTTGCTTCGACTACCAA+CGG | + | chr6.3:6461051-6461070 | None:intergenic | 45.0% | |
| GTTCCCGTCAACATAGCTAT+GGG | - | chr6.3:6461795-6461814 | MS.gene20449:CDS | 45.0% | |
| TAGTAGCTAGTGATGCAGTG+GGG | - | chr6.3:6461268-6461287 | MS.gene20449:CDS | 45.0% | |
| TATGGGCATGCCAAAAGGTT+CGG | - | chr6.3:6461812-6461831 | MS.gene20449:CDS | 45.0% | |
| TCTAGTAGCTAGTGATGCAG+TGG | - | chr6.3:6461266-6461285 | MS.gene20449:CDS | 45.0% | |
| TCTGTCGAAAAGGGTCTGAT+GGG | + | chr6.3:6459908-6459927 | None:intergenic | 45.0% | |
| TGCTTTGCAGAGGTTTATGG+AGG | - | chr6.3:6460660-6460679 | MS.gene20449:CDS | 45.0% | |
| ! | ACCGAAATCGAAAAGGGTGT+CGG | - | chr6.3:6459962-6459981 | MS.gene20449:CDS | 45.0% |
| ! | ACCGACACCCTTTTCGATTT+CGG | + | chr6.3:6459966-6459985 | None:intergenic | 45.0% |
| ! | ACTGTGTTGTTGCCTTCTCA+AGG | - | chr6.3:6461106-6461125 | MS.gene20449:CDS | 45.0% |
| ! | ATCAGACCCTTTTCGACAGA+CGG | - | chr6.3:6459908-6459927 | MS.gene20449:CDS | 45.0% |
| ! | ATGCGGTGATCCTAGTGTTT+TGG | - | chr6.3:6460957-6460976 | MS.gene20449:CDS | 45.0% |
| ! | GGCGAAAATTGCCGTTTAGA+CGG | - | chr6.3:6461600-6461619 | MS.gene20449:CDS | 45.0% |
| !! | CTCAGATTTGCTACAGCGTT+TGG | - | chr6.3:6461765-6461784 | MS.gene20449:CDS | 45.0% |
| AAACCTGAATCAAGGGGGAG+AGG | - | chr6.3:6462008-6462027 | MS.gene20449:CDS | 50.0% | |
| AAAGTAGTGGCGAGTCCATC+GGG | + | chr6.3:6461429-6461448 | None:intergenic | 50.0% | |
| AACCTGAATCAAGGGGGAGA+GGG | - | chr6.3:6462009-6462028 | MS.gene20449:CDS | 50.0% | |
| AAGCAAATTGCGGGAAGAGC+TGG | - | chr6.3:6461384-6461403 | MS.gene20449:CDS | 50.0% | |
| ACCTCACGATGCCTCATACT+TGG | - | chr6.3:6460563-6460582 | MS.gene20449:CDS | 50.0% | |
| AGAGGATGCGTTTATCCCGA+TGG | - | chr6.3:6461411-6461430 | MS.gene20449:CDS | 50.0% | |
| CAAAGTAGTGGCGAGTCCAT+CGG | + | chr6.3:6461430-6461449 | None:intergenic | 50.0% | |
| CAATATCCGCAGCCATTGCT+TGG | + | chr6.3:6461950-6461969 | None:intergenic | 50.0% | |
| CGAAAGATCTGTCAGGACAC+AGG | - | chr6.3:6460988-6461007 | MS.gene20449:CDS | 50.0% | |
| CTTTCGCAAGGGCGATGAAA+AGG | - | chr6.3:6460590-6460609 | MS.gene20449:CDS | 50.0% | |
| GAGGTTTATGGAGGCCAAGA+AGG | - | chr6.3:6460669-6460688 | MS.gene20449:CDS | 50.0% | |
| GATCACGAGGTTTAGGGAGA+TGG | - | chr6.3:6460528-6460547 | MS.gene20449:CDS | 50.0% | |
| GATGCCTACTCTCAAGGTCT+AGG | + | chr6.3:6461857-6461876 | None:intergenic | 50.0% | |
| GCCCTTTGATCATGTGACGA+AGG | - | chr6.3:6461491-6461510 | MS.gene20449:CDS | 50.0% | |
| GGTTCCCGTCAACATAGCTA+TGG | - | chr6.3:6461794-6461813 | MS.gene20449:CDS | 50.0% | |
| GGTTTATGGAGGCCAAGAAG+GGG | - | chr6.3:6460671-6460690 | MS.gene20449:CDS | 50.0% | |
| GTCGAAGCAAAGACCTTGCT+TGG | - | chr6.3:6461057-6461076 | MS.gene20449:CDS | 50.0% | |
| GTCTGTCGAAAAGGGTCTGA+TGG | + | chr6.3:6459909-6459928 | None:intergenic | 50.0% | |
| TCTCGTCAGCCATCAAACCA+AGG | + | chr6.3:6460930-6460949 | None:intergenic | 50.0% | |
| TGCTACAGCGTTTGGTCAGA+AGG | - | chr6.3:6461773-6461792 | MS.gene20449:CDS | 50.0% | |
| TGTTGAAATGGCTTCGACGC+AGG | - | chr6.3:6460825-6460844 | MS.gene20449:CDS | 50.0% | |
| TTAACCTGTGACGCTGGAAC+AGG | + | chr6.3:6461366-6461385 | None:intergenic | 50.0% | |
| ! | CTTTTCATCGCCCTTGCGAA+AGG | + | chr6.3:6460592-6460611 | None:intergenic | 50.0% |
| ! | GAGCAGGTTGAATTGTTCGC+CGG | - | chr6.3:6461534-6461553 | MS.gene20449:CDS | 50.0% |
| ! | TCATTCCGTGCCGAACCTTT+TGG | + | chr6.3:6461825-6461844 | None:intergenic | 50.0% |
| !! | ACCAAGTATGAGGCATCGTG+AGG | + | chr6.3:6460567-6460586 | None:intergenic | 50.0% |
| AGCTAGTGATGCAGTGGGGA+TGG | - | chr6.3:6461272-6461291 | MS.gene20449:CDS | 55.0% | |
| CGAAACTTGTGTGCAGCCGT+CGG | + | chr6.3:6460379-6460398 | None:intergenic | 55.0% | |
| CGACGGCTGCACACAAGTTT+CGG | - | chr6.3:6460377-6460396 | MS.gene20449:CDS | 55.0% | |
| GAAAGCCCAAGCAATGGCTG+CGG | - | chr6.3:6461941-6461960 | MS.gene20449:CDS | 55.0% | |
| GCATGCCAAAAGGTTCGGCA+CGG | - | chr6.3:6461817-6461836 | MS.gene20449:CDS | 55.0% | |
| GCTAGTGATGCAGTGGGGAT+GGG | - | chr6.3:6461273-6461292 | MS.gene20449:CDS | 55.0% | |
| GCTTGGGCTTTCTCCGCATA+TGG | + | chr6.3:6461933-6461952 | None:intergenic | 55.0% | |
| TCCTCGCCGTCTGTCGAAAA+GGG | + | chr6.3:6459917-6459936 | None:intergenic | 55.0% | |
| TCTTCCTGTTCCAGCGTCAC+AGG | - | chr6.3:6461359-6461378 | MS.gene20449:CDS | 55.0% | |
| TGCGGAGAAAGCCCAAGCAA+TGG | - | chr6.3:6461935-6461954 | MS.gene20449:CDS | 55.0% | |
| TTCCCTCTCCCCCTTGATTC+AGG | + | chr6.3:6462014-6462033 | None:intergenic | 55.0% | |
| TTCGCTTGGACCGTGTGATG+AGG | - | chr6.3:6460447-6460466 | MS.gene20449:CDS | 55.0% | |
| ! | TAGGGCGCTCCTTGGTTTGA+TGG | - | chr6.3:6460918-6460937 | MS.gene20449:CDS | 55.0% |
| ! | TTTTCGACAGACGGCGAGGA+GGG | - | chr6.3:6459917-6459936 | MS.gene20449:CDS | 55.0% |
| CTCCTCGCCGTCTGTCGAAA+AGG | + | chr6.3:6459918-6459937 | None:intergenic | 60.0% | |
| CTTTGCCGCCAGAGACTCGT+AGG | - | chr6.3:6461199-6461218 | MS.gene20449:CDS | 60.0% | |
| TGCTGCCTACGAGTCTCTGG+CGG | + | chr6.3:6461207-6461226 | None:intergenic | 60.0% | |
| ! | ACCCTTTTCGACAGACGGCG+AGG | - | chr6.3:6459913-6459932 | MS.gene20449:CDS | 60.0% |
| ! | CTTTTCGACAGACGGCGAGG+AGG | - | chr6.3:6459916-6459935 | MS.gene20449:CDS | 60.0% |
| ! | GCTTGCTGCCTACGAGTCTC+TGG | + | chr6.3:6461210-6461229 | None:intergenic | 60.0% |
| GCGGGAAGAGCTGGTCGAAG+AGG | - | chr6.3:6461393-6461412 | MS.gene20449:CDS | 65.0% | |
| !! | GCATGGACTAGGGCGCTCCT+TGG | - | chr6.3:6460910-6460929 | MS.gene20449:CDS | 65.0% |
| TCGACAGACGGCGAGGAGGG+TGG | - | chr6.3:6459920-6459939 | MS.gene20449:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 6459902 | 6462151 | 6459902 | ID=MS.gene20449 |
| chr6.3 | mRNA | 6459902 | 6462151 | 6459902 | ID=MS.gene20449.t1;Parent=MS.gene20449 |
| chr6.3 | exon | 6459902 | 6462151 | 6459902 | ID=MS.gene20449.t1.exon1;Parent=MS.gene20449.t1 |
| chr6.3 | CDS | 6459902 | 6462151 | 6459902 | ID=cds.MS.gene20449.t1;Parent=MS.gene20449.t1 |
| Gene Sequence |
| Protein sequence |
