Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058126.t1 | XP_024640983.1 | 98.9 | 463 | 5 | 0 | 1 | 463 | 1 | 463 | 1.70E-269 | 937.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058126.t1 | Q54PW5 | 46.2 | 411 | 174 | 6 | 31 | 438 | 103 | 469 | 4.5e-109 | 396.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058126.t1 | G7K6J3 | 98.9 | 463 | 5 | 0 | 1 | 463 | 1 | 463 | 1.2e-269 | 937.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051363 | MS.gene058126 | 0.805833 | 1.10E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene058126 | 0.810379 | 1.19E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene058126 | 0.858108 | 1.03E-62 | -1.69E-46 |
| MS.gene053080 | MS.gene058126 | 0.819696 | 1.01E-52 | -1.69E-46 |
| MS.gene054657 | MS.gene058126 | 0.807208 | 5.66E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene058126 | 0.806614 | 7.55E-50 | -1.69E-46 |
| MS.gene055222 | MS.gene058126 | 0.80807 | 3.71E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene058126 | 0.812246 | 4.67E-51 | -1.69E-46 |
| MS.gene056403 | MS.gene058126 | 0.809935 | 1.48E-50 | -1.69E-46 |
| MS.gene056605 | MS.gene058126 | 0.818842 | 1.59E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene058399 | 0.800608 | 1.33E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene058548 | 0.819814 | 9.53E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene058549 | 0.805525 | 1.28E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene05978 | 0.837046 | 6.55E-57 | -1.69E-46 |
| MS.gene058126 | MS.gene05979 | 0.820277 | 7.47E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene059830 | 0.812097 | 5.03E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene062351 | 0.816729 | 4.76E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene062770 | 0.817026 | 4.08E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene063407 | 0.842259 | 2.88E-58 | -1.69E-46 |
| MS.gene058126 | MS.gene064937 | 0.801297 | 9.62E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene065559 | 0.843829 | 1.10E-58 | -1.69E-46 |
| MS.gene058126 | MS.gene065666 | 0.810832 | 9.47E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene065793 | 0.819733 | 9.95E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene066067 | 0.803303 | 3.72E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene066319 | 0.803554 | 3.30E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene066321 | 0.813037 | 3.13E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene066745 | 0.804617 | 1.98E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene068752 | 0.803429 | 3.50E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene06982 | 0.804793 | 1.82E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene07067 | 0.818048 | 2.40E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene07100 | 0.801981 | 6.97E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene071074 | 0.807508 | 4.89E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene071076 | 0.806533 | 7.85E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene071905 | 0.82839 | 9.23E-55 | -1.69E-46 |
| MS.gene058126 | MS.gene072087 | -0.819127 | 1.37E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene072151 | 0.813784 | 2.15E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene072740 | 0.8242 | 9.18E-54 | -1.69E-46 |
| MS.gene058126 | MS.gene073954 | 0.81846 | 1.94E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene074462 | 0.822208 | 2.68E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene08319 | 0.808847 | 2.53E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene08922 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene09550 | 0.801067 | 1.07E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene09636 | 0.823107 | 1.66E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene20449 | 0.804131 | 2.50E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene20939 | 0.800462 | 1.43E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene21651 | 0.832728 | 8.01E-56 | -1.69E-46 |
| MS.gene058126 | MS.gene21700 | 0.83786 | 4.05E-57 | -1.69E-46 |
| MS.gene058126 | MS.gene21886 | 0.956468 | 2.75E-114 | -1.69E-46 |
| MS.gene058126 | MS.gene21926 | 0.83963 | 1.41E-57 | -1.69E-46 |
| MS.gene058126 | MS.gene21928 | 0.808958 | 2.40E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene22270 | 0.817205 | 3.72E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene22321 | 0.827035 | 1.95E-54 | -1.69E-46 |
| MS.gene058126 | MS.gene23484 | 0.809484 | 1.85E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene24375 | 0.801293 | 9.64E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene25207 | 0.819393 | 1.19E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene27287 | 0.801459 | 8.91E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene27301 | 0.801363 | 9.33E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene27865 | -0.807199 | 5.68E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene28319 | 0.814425 | 1.55E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene29047 | 0.805857 | 1.09E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene29109 | 0.818822 | 1.60E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene29719 | 0.815614 | 8.45E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene30246 | 0.809765 | 1.61E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene31503 | 0.811536 | 6.67E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene32091 | 0.811099 | 8.29E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene32134 | 0.810959 | 8.89E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene34495 | 0.801517 | 8.68E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene35870 | 0.804752 | 1.86E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene37725 | 0.807667 | 4.52E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene38754 | 0.823954 | 1.05E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene39529 | 0.802151 | 6.43E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene41434 | 0.806211 | 9.18E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene41838 | 0.813813 | 2.12E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene42125 | 0.817586 | 3.05E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene43447 | 0.812524 | 4.06E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene44240 | 0.800526 | 1.38E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene44260 | 0.810525 | 1.10E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene45567 | 0.827742 | 1.32E-54 | -1.69E-46 |
| MS.gene058126 | MS.gene45933 | 0.81654 | 5.25E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene46128 | 0.816147 | 6.42E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene47581 | 0.802217 | 6.23E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene48056 | 0.829953 | 3.86E-55 | -1.69E-46 |
| MS.gene058126 | MS.gene49310 | 0.821887 | 3.18E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene49426 | 0.811787 | 5.88E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene50037 | 0.802973 | 4.35E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene50615 | 0.810362 | 1.20E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene51445 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene52406 | 0.801237 | 9.90E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene52837 | 0.816435 | 5.54E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene53391 | 0.805003 | 1.65E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene53579 | 0.821114 | 4.79E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene55396 | 0.815424 | 9.31E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene55397 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene55699 | 0.807732 | 4.38E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene55707 | 0.808301 | 3.31E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene56227 | 0.821093 | 4.85E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene58134 | 0.805498 | 1.30E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene58919 | 0.81225 | 4.66E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene60566 | 0.801221 | 9.97E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene61239 | 0.82015 | 7.99E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene61642 | 0.837025 | 6.63E-57 | -1.69E-46 |
| MS.gene058126 | MS.gene62501 | 0.80556 | 1.26E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene62681 | 0.800241 | 1.58E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene63673 | 0.802254 | 6.12E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene64243 | 0.809844 | 1.55E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene67007 | 0.804551 | 2.05E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene67346 | 0.810322 | 1.22E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene67662 | 0.800594 | 1.34E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene68136 | 0.807129 | 5.88E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene68264 | 0.800562 | 1.36E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene68735 | 0.801886 | 7.29E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene70346 | 0.814662 | 1.37E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene74919 | 0.801949 | 7.07E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene75003 | 0.80435 | 2.25E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene75072 | 0.826343 | 2.86E-54 | -1.69E-46 |
| MS.gene058126 | MS.gene75605 | 0.817544 | 3.12E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene75707 | 0.801279 | 9.70E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene75884 | 0.800619 | 1.32E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene76046 | 0.804913 | 1.72E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene76478 | 0.801142 | 1.04E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene78478 | 0.82557 | 4.36E-54 | -1.69E-46 |
| MS.gene058126 | MS.gene78682 | 0.817924 | 2.56E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene79285 | 0.802185 | 6.33E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene81379 | 0.807996 | 3.85E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene82805 | 0.836338 | 9.92E-57 | -1.69E-46 |
| MS.gene058126 | MS.gene82828 | 0.85075 | 1.39E-60 | -1.69E-46 |
| MS.gene058126 | MS.gene82879 | 0.806044 | 9.96E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene83200 | 0.802268 | 6.08E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene83830 | 0.80007 | 1.71E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene85257 | 0.803046 | 4.20E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene85663 | 0.806229 | 9.10E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene87121 | 0.800847 | 1.19E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene87795 | 0.81586 | 7.45E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene89888 | 0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene90525 | 0.812896 | 3.37E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene90585 | 0.822984 | 1.77E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene94183 | 0.809176 | 2.15E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene95096 | 0.802343 | 5.87E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene95886 | 0.823374 | 1.43E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene96508 | 0.803034 | 4.23E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene97003 | 0.806593 | 7.63E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene97738 | 0.824854 | 6.44E-54 | -1.69E-46 |
| MS.gene058126 | MS.gene98436 | 0.800632 | 1.32E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene98461 | 0.809896 | 1.51E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene98889 | 0.805697 | 1.18E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene99313 | 0.813002 | 3.19E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058126.t1 | MTR_5g007970 | 98.920 | 463 | 5 | 0 | 1 | 463 | 1 | 463 | 0.0 | 952 |
| MS.gene058126.t1 | MTR_1g008370 | 23.797 | 374 | 223 | 10 | 64 | 383 | 126 | 491 | 1.58e-18 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058126.t1 | AT5G62030 | 70.982 | 448 | 115 | 6 | 10 | 450 | 6 | 445 | 0.0 | 640 |
| MS.gene058126.t1 | AT3G59630 | 24.057 | 424 | 255 | 12 | 55 | 432 | 9 | 411 | 6.41e-24 | 104 |
| MS.gene058126.t1 | AT3G59630 | 24.057 | 424 | 255 | 12 | 55 | 432 | 9 | 411 | 6.41e-24 | 104 |
Find 123 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTAAGGATTTAGGGTTTA+TGG | 0.120386 | 5.4:-3170102 | MS.gene058126:CDS |
| GGGACTATTCAGTTTGCTTC+TGG | 0.141078 | 5.4:-3170059 | MS.gene058126:CDS |
| AAGTTGAATTCTAAGGATTT+AGG | 0.180160 | 5.4:-3170110 | MS.gene058126:CDS |
| ACAAGGGAATCCTAAGATTT+TGG | 0.190611 | 5.4:-3169688 | MS.gene058126:CDS |
| GCTGAGATTCTTATTCATTA+TGG | 0.202025 | 5.4:-3170230 | MS.gene058126:CDS |
| GGAGAGATTGGAAATGAAAA+TGG | 0.217434 | 5.4:-3169667 | MS.gene058126:CDS |
| TTCAGTTTGCTTCTGGGATT+AGG | 0.232646 | 5.4:-3170052 | MS.gene058126:CDS |
| TACCCTAATTTCTCCAATTC+AGG | 0.242150 | 5.4:+3170020 | None:intergenic |
| AAGCCTGAATTGGAGAAATT+AGG | 0.248444 | 5.4:-3170023 | MS.gene058126:CDS |
| ATTTAGGGTTTATGGGTAAA+AGG | 0.253235 | 5.4:-3170094 | MS.gene058126:CDS |
| TCCAATCTCTCCAAAATCTT+AGG | 0.253400 | 5.4:+3169678 | None:intergenic |
| GAAATTAGGGTATAGGGTTT+TGG | 0.278652 | 5.4:-3170009 | MS.gene058126:CDS |
| GCCAAGGCGACTGAAGATTT+TGG | 0.283970 | 5.4:-3169357 | MS.gene058126:CDS |
| TCAGTTTGCTTCTGGGATTA+GGG | 0.286217 | 5.4:-3170051 | MS.gene058126:CDS |
| TCCTAGACTCTCTATTGATT+GGG | 0.286257 | 5.4:-3169541 | MS.gene058126:CDS |
| TCAAACAAAGAGATTCTATA+AGG | 0.295399 | 5.4:+3169597 | None:intergenic |
| AGTTGAATTCTAAGGATTTA+GGG | 0.301959 | 5.4:-3170109 | MS.gene058126:CDS |
| TACTGTTAAGTTGAATTCTA+AGG | 0.302039 | 5.4:-3170117 | MS.gene058126:CDS |
| GATAGCGAATCCGGGGATTA+AGG | 0.306937 | 5.4:-3169850 | MS.gene058126:CDS |
| GGACTATTCAGTTTGCTTCT+GGG | 0.318873 | 5.4:-3170058 | MS.gene058126:CDS |
| GAGTACATGAGAAGGCCTTC+AGG | 0.322311 | 5.4:+3170368 | None:intergenic |
| TCTAAGGATTTAGGGTTTAT+GGG | 0.324406 | 5.4:-3170101 | MS.gene058126:CDS |
| ATTGGAGAAATTAGGGTATA+GGG | 0.325559 | 5.4:-3170015 | MS.gene058126:CDS |
| AATTGGAGAAATTAGGGTAT+AGG | 0.337620 | 5.4:-3170016 | MS.gene058126:CDS |
| GTCCTAGACTCTCTATTGAT+TGG | 0.343341 | 5.4:-3169542 | MS.gene058126:CDS |
| GGTAAAAGGGTTATTCTTGC+TGG | 0.344947 | 5.4:-3170080 | MS.gene058126:CDS |
| TGAGGATTGAATCTGGGATT+TGG | 0.359458 | 5.4:+3170507 | None:intergenic |
| GATTTCTCTGCTATTGCTCT+TGG | 0.366141 | 5.4:-3170254 | MS.gene058126:CDS |
| AGCGAAGGAGGCAAGGAATT+GGG | 0.371820 | 5.4:-3169736 | MS.gene058126:CDS |
| CAAGGTTGTGAAGATGTTAC+AGG | 0.372583 | 5.4:-3169423 | MS.gene058126:CDS |
| TCCAACTCTTTCCCCACCTT+CGG | 0.380494 | 5.4:+3169936 | None:intergenic |
| TCGAAGTTCACAAATGCGTT+TGG | 0.385078 | 5.4:-3170433 | MS.gene058126:CDS |
| GAGAGATTGGAAATGAAAAT+GGG | 0.385615 | 5.4:-3169666 | MS.gene058126:CDS |
| AGCCTGAATTGGAGAAATTA+GGG | 0.386228 | 5.4:-3170022 | MS.gene058126:CDS |
| AGCGTTTATGATAGCGAATC+CGG | 0.400296 | 5.4:-3169859 | MS.gene058126:CDS |
| CAAACAAAGAGATTCTATAA+GGG | 0.414212 | 5.4:+3169598 | None:intergenic |
| AAGCGAAGGAGGCAAGGAAT+TGG | 0.416971 | 5.4:-3169737 | MS.gene058126:CDS |
| GGGTCGTTGAGGATTGAATC+TGG | 0.417738 | 5.4:+3170500 | None:intergenic |
| GTAACTCACTGTTACGTTCT+CGG | 0.423153 | 5.4:-3170308 | MS.gene058126:CDS |
| TAGGGCTGTGAAGCCTGAAT+TGG | 0.423463 | 5.4:-3170033 | MS.gene058126:CDS |
| ACTTCGAAGGAGTAGTTTGA+TGG | 0.426404 | 5.4:+3170449 | None:intergenic |
| GGGGAAAGAGTTGGATGATA+AGG | 0.427023 | 5.4:-3169928 | MS.gene058126:CDS |
| CAGTCGAAGCCGTTGTCTGC+TGG | 0.443942 | 5.4:-3169981 | MS.gene058126:CDS |
| CTCTTTGTTTGAAGATTCTG+TGG | 0.444587 | 5.4:-3169586 | MS.gene058126:CDS |
| AGCGATGCGTTTAGCGGCGG+TGG | 0.450582 | 5.4:+3170400 | None:intergenic |
| GCCTCAAAAGGAGTCAGAAC+TGG | 0.454686 | 5.4:+3169501 | None:intergenic |
| TTGAAGATTCTGTGGATGCT+TGG | 0.461951 | 5.4:-3169578 | MS.gene058126:CDS |
| TTTAGGGTTTATGGGTAAAA+GGG | 0.464356 | 5.4:-3170093 | MS.gene058126:CDS |
| GTTGCTCTAACGGTAGCTGC+GGG | 0.466214 | 5.4:-3169383 | MS.gene058126:CDS |
| AGAAACAGTGATGGTGTTGT+TGG | 0.468978 | 5.4:+3170568 | None:intergenic |
| TATGATCATGTGGGTATGAA+GGG | 0.470330 | 5.4:-3169783 | MS.gene058126:CDS |
| ACCAAAATCTTCAGTCGCCT+TGG | 0.476477 | 5.4:+3169356 | None:intergenic |
| ATATGATCATGTGGGTATGA+AGG | 0.476747 | 5.4:-3169784 | MS.gene058126:CDS |
| TGATAAGGAAGAGAGTGTTT+TGG | 0.478103 | 5.4:-3169913 | MS.gene058126:CDS |
| AGGTTGTTCTGGAAATTCCA+TGG | 0.486487 | 5.4:+3170598 | None:intergenic |
| TGGTGTTTGTGTCGGATGGA+AGG | 0.488027 | 5.4:-3169893 | MS.gene058126:CDS |
| TGCGTTTAGCGGCGGTGGAA+CGG | 0.489236 | 5.4:+3170405 | None:intergenic |
| GCGTTTATGATAGCGAATCC+GGG | 0.502842 | 5.4:-3169858 | MS.gene058126:CDS |
| AGTGCTATCTCAGCCTCAAA+AGG | 0.509062 | 5.4:+3169489 | None:intergenic |
| CGGTAGCTGCGGGGATGCCA+AGG | 0.510110 | 5.4:-3169373 | MS.gene058126:CDS |
| AAAACAACTTCCCCACATAA+GGG | 0.512334 | 5.4:+3169814 | None:intergenic |
| GTAAAAGGGTTATTCTTGCT+GGG | 0.516662 | 5.4:-3170079 | MS.gene058126:CDS |
| TAGGAAAATTTCAGTAACTT+CGG | 0.516766 | 5.4:-3169253 | MS.gene058126:CDS |
| GAAACAGTGATGGTGTTGTT+GGG | 0.521747 | 5.4:+3170569 | None:intergenic |
| GATATCTTCACCACCTTCGC+CGG | 0.525270 | 5.4:-3170332 | MS.gene058126:CDS |
| AGTACATGAGAAGGCCTTCA+GGG | 0.526196 | 5.4:+3170369 | None:intergenic |
| AGGGTGTACTGCACCGAAGG+TGG | 0.530199 | 5.4:-3169949 | MS.gene058126:CDS |
| GACTATTATGCTCAAGATGG+AGG | 0.530446 | 5.4:-3169318 | MS.gene058126:CDS |
| CGAAGGAGTAGTTTGATGGA+AGG | 0.531570 | 5.4:+3170453 | None:intergenic |
| TTTAGGTATGACCCTTATGT+GGG | 0.532658 | 5.4:-3169825 | MS.gene058126:CDS |
| TGATGGAAGGATTGAGATTG+CGG | 0.540466 | 5.4:+3170466 | None:intergenic |
| TACCTAAAAGCCTTAATCCC+CGG | 0.540870 | 5.4:+3169840 | None:intergenic |
| AGATTGCGGCGTTGAGAAGT+GGG | 0.549039 | 5.4:+3170480 | None:intergenic |
| GAGATTGCGGCGTTGAGAAG+TGG | 0.551098 | 5.4:+3170479 | None:intergenic |
| AAGAGCGATTGTTGCTCTAA+CGG | 0.551801 | 5.4:-3169393 | MS.gene058126:CDS |
| GTTCTCGGTGATGTTACCTA+TGG | 0.552000 | 5.4:-3170293 | MS.gene058126:CDS |
| GGGTGTACTGCACCGAAGGT+GGG | 0.552210 | 5.4:-3169948 | MS.gene058126:CDS |
| GGTCGTTGAGGATTGAATCT+GGG | 0.555765 | 5.4:+3170501 | None:intergenic |
| AACGCATTTGTGAACTTCGA+AGG | 0.558188 | 5.4:+3170436 | None:intergenic |
| GGTGTACTGCACCGAAGGTG+GGG | 0.558556 | 5.4:-3169947 | MS.gene058126:CDS |
| TTGGAGGAATATGATCATGT+GGG | 0.563003 | 5.4:-3169792 | MS.gene058126:CDS |
| CGTTGAGAAGTGGGTCGTTG+AGG | 0.563741 | 5.4:+3170489 | None:intergenic |
| GGATAAGAGAGTACATGAGA+AGG | 0.565832 | 5.4:+3170360 | None:intergenic |
| CCTAGACTCTCTATTGATTG+GGG | 0.565888 | 5.4:-3169540 | MS.gene058126:CDS |
| ACTATTATGCTCAAGATGGA+GGG | 0.566137 | 5.4:-3169317 | MS.gene058126:CDS |
| TTGAAGAGCGATGCGTTTAG+CGG | 0.568818 | 5.4:+3170394 | None:intergenic |
| ATGCTCAAGATGGAGGGGAG+TGG | 0.569680 | 5.4:-3169311 | MS.gene058126:CDS |
| TCTTGAGCATAATAGTCCAT+TGG | 0.570183 | 5.4:+3169324 | None:intergenic |
| GCAGACAACGGCTTCGACTG+CGG | 0.570442 | 5.4:+3169984 | None:intergenic |
| ATGGACTATTATGCTCAAGA+TGG | 0.571439 | 5.4:-3169321 | MS.gene058126:CDS |
| TTTAGGGTGTACTGCACCGA+AGG | 0.572206 | 5.4:-3169952 | MS.gene058126:CDS |
| ATCGCTCTTCAATTCCCTGA+AGG | 0.572586 | 5.4:-3170383 | MS.gene058126:CDS |
| TTCTTTGATAGAAACAGTGA+TGG | 0.575244 | 5.4:+3170559 | None:intergenic |
| TTTGAGGCTGAGATAGCACT+GGG | 0.575711 | 5.4:-3169486 | MS.gene058126:CDS |
| CTATTATGCTCAAGATGGAG+GGG | 0.577204 | 5.4:-3169316 | MS.gene058126:CDS |
| ATCAATACAACAAGCACCAT+AGG | 0.579949 | 5.4:+3170277 | None:intergenic |
| GCGAAGGAGGCAAGGAATTG+GGG | 0.585334 | 5.4:-3169735 | MS.gene058126:CDS |
| AAAAGCCTAGTCGTCCTGCT+AGG | 0.588814 | 5.4:-3169272 | MS.gene058126:CDS |
| TGGGATTGATACCTGGATGG+TGG | 0.589217 | 5.4:-3169467 | MS.gene058126:CDS |
| TAAAGGATTTGATTATACTG+TGG | 0.592986 | 5.4:-3169640 | MS.gene058126:CDS |
| GGGATTGATACCTGGATGGT+GGG | 0.594275 | 5.4:-3169466 | MS.gene058126:CDS |
| AGAGATTGGAAATGAAAATG+GGG | 0.600592 | 5.4:-3169665 | MS.gene058126:CDS |
| ATAGCACTGGGATTGATACC+TGG | 0.600649 | 5.4:-3169474 | MS.gene058126:CDS |
| ACCGAAGGTGGGGAAAGAGT+TGG | 0.600972 | 5.4:-3169937 | MS.gene058126:CDS |
| TGTTGCTCTAACGGTAGCTG+CGG | 0.603328 | 5.4:-3169384 | MS.gene058126:CDS |
| CCCCAATCAATAGAGAGTCT+AGG | 0.603832 | 5.4:+3169540 | None:intergenic |
| ATGTGGGTATGAAGGGGTCG+AGG | 0.608316 | 5.4:-3169776 | MS.gene058126:CDS |
| TTTGGAGGAATATGATCATG+TGG | 0.610687 | 5.4:-3169793 | MS.gene058126:CDS |
| GTGAGTTACACCGGCGAAGG+TGG | 0.617454 | 5.4:+3170322 | None:intergenic |
| AAAACTCAGATGCAGAAACA+AGG | 0.622881 | 5.4:-3169441 | MS.gene058126:CDS |
| TTAGGGACTTTGGGTAGACA+AGG | 0.624346 | 5.4:-3169705 | MS.gene058126:CDS |
| GAGATTGGAAATGAAAATGG+GGG | 0.625888 | 5.4:-3169664 | MS.gene058126:CDS |
| ACAGTGAGTTACACCGGCGA+AGG | 0.629851 | 5.4:+3170319 | None:intergenic |
| AACGTAACAGTGAGTTACAC+CGG | 0.640720 | 5.4:+3170313 | None:intergenic |
| TAGGGACTTTGGGTAGACAA+GGG | 0.641045 | 5.4:-3169704 | MS.gene058126:CDS |
| CGTTTATGATAGCGAATCCG+GGG | 0.643038 | 5.4:-3169857 | MS.gene058126:CDS |
| AAGAGCGATGCGTTTAGCGG+CGG | 0.644502 | 5.4:+3170397 | None:intergenic |
| CACTGGGATTGATACCTGGA+TGG | 0.644522 | 5.4:-3169470 | MS.gene058126:CDS |
| ATGATCATGTGGGTATGAAG+GGG | 0.649107 | 5.4:-3169782 | MS.gene058126:CDS |
| AAAATCTCACCAGCAGACAA+CGG | 0.661511 | 5.4:+3169972 | None:intergenic |
| TTAGGTATGACCCTTATGTG+GGG | 0.683162 | 5.4:-3169824 | MS.gene058126:CDS |
| TTGCTCTAACGGTAGCTGCG+GGG | 0.685362 | 5.4:-3169382 | MS.gene058126:CDS |
| AGGTGGTGAAGATATCAGAG+AGG | 0.733119 | 5.4:+3170339 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CAAACAAAGAGATTCTATAA+GGG | + | chr5.4:3170228-3170247 | None:intergenic | 25.0% |
| ! | TAAAGGATTTGATTATACTG+TGG | - | chr5.4:3170183-3170202 | MS.gene058126:CDS | 25.0% |
| ! | TAGGAAAATTTCAGTAACTT+CGG | - | chr5.4:3170570-3170589 | MS.gene058126:CDS | 25.0% |
| ! | TCAAACAAAGAGATTCTATA+AGG | + | chr5.4:3170229-3170248 | None:intergenic | 25.0% |
| ! | TCAACAAAAACATAAAGACA+AGG | + | chr5.4:3169656-3169675 | None:intergenic | 25.0% |
| !! | AAGTTGAATTCTAAGGATTT+AGG | - | chr5.4:3169713-3169732 | MS.gene058126:CDS | 25.0% |
| !! | AGTTGAATTCTAAGGATTTA+GGG | - | chr5.4:3169714-3169733 | MS.gene058126:CDS | 25.0% |
| !!! | TACTGTTAAGTTGAATTCTA+AGG | - | chr5.4:3169706-3169725 | MS.gene058126:CDS | 25.0% |
| AATTGGAGAAATTAGGGTAT+AGG | - | chr5.4:3169807-3169826 | MS.gene058126:CDS | 30.0% | |
| AGAGATTGGAAATGAAAATG+GGG | - | chr5.4:3170158-3170177 | MS.gene058126:CDS | 30.0% | |
| ATTGGAGAAATTAGGGTATA+GGG | - | chr5.4:3169808-3169827 | MS.gene058126:CDS | 30.0% | |
| GAGAGATTGGAAATGAAAAT+GGG | - | chr5.4:3170157-3170176 | MS.gene058126:CDS | 30.0% | |
| GCTGAGATTCTTATTCATTA+TGG | - | chr5.4:3169593-3169612 | MS.gene058126:CDS | 30.0% | |
| TTCTTTGATAGAAACAGTGA+TGG | + | chr5.4:3169267-3169286 | None:intergenic | 30.0% | |
| ! | ATTTAGGGTTTATGGGTAAA+AGG | - | chr5.4:3169729-3169748 | MS.gene058126:CDS | 30.0% |
| ! | GGAATTTTTGTCGAATCAAT+AGG | + | chr5.4:3169635-3169654 | None:intergenic | 30.0% |
| ! | TCTAAGGATTTAGGGTTTAT+GGG | - | chr5.4:3169722-3169741 | MS.gene058126:CDS | 30.0% |
| ! | TGGTTTTTGATGAATCGTTT+TGG | + | chr5.4:3169299-3169318 | None:intergenic | 30.0% |
| ! | TTCTAAGGATTTAGGGTTTA+TGG | - | chr5.4:3169721-3169740 | MS.gene058126:CDS | 30.0% |
| ! | TTTAGGGTTTATGGGTAAAA+GGG | - | chr5.4:3169730-3169749 | MS.gene058126:CDS | 30.0% |
| !! | AAATGCAATTTTGAAAGCGA+AGG | - | chr5.4:3170072-3170091 | MS.gene058126:CDS | 30.0% |
| !!! | ACTAGGCTTTTTCATATAAG+AGG | + | chr5.4:3170542-3170561 | None:intergenic | 30.0% |
| !!! | TTGATGAATCGTTTTGGTTT+TGG | + | chr5.4:3169293-3169312 | None:intergenic | 30.0% |
| AAAAACAACTTCCCCACATA+AGG | + | chr5.4:3170013-3170032 | None:intergenic | 35.0% | |
| AAAACAACTTCCCCACATAA+GGG | + | chr5.4:3170012-3170031 | None:intergenic | 35.0% | |
| AAAACTCAGATGCAGAAACA+AGG | - | chr5.4:3170382-3170401 | MS.gene058126:CDS | 35.0% | |
| AAGCCTGAATTGGAGAAATT+AGG | - | chr5.4:3169800-3169819 | MS.gene058126:CDS | 35.0% | |
| ACTATTATGCTCAAGATGGA+GGG | - | chr5.4:3170506-3170525 | MS.gene058126:CDS | 35.0% | |
| AGCCTGAATTGGAGAAATTA+GGG | - | chr5.4:3169801-3169820 | MS.gene058126:CDS | 35.0% | |
| ATATGATCATGTGGGTATGA+AGG | - | chr5.4:3170039-3170058 | MS.gene058126:CDS | 35.0% | |
| ATCAATACAACAAGCACCAT+AGG | + | chr5.4:3169549-3169568 | None:intergenic | 35.0% | |
| GAAATGAAAATGGGGGATAA+AGG | - | chr5.4:3170166-3170185 | MS.gene058126:CDS | 35.0% | |
| GAGATTGGAAATGAAAATGG+GGG | - | chr5.4:3170159-3170178 | MS.gene058126:CDS | 35.0% | |
| GGAGAGATTGGAAATGAAAA+TGG | - | chr5.4:3170156-3170175 | MS.gene058126:CDS | 35.0% | |
| GTAAAAGGGTTATTCTTGCT+GGG | - | chr5.4:3169744-3169763 | MS.gene058126:CDS | 35.0% | |
| TACCCTAATTTCTCCAATTC+AGG | + | chr5.4:3169806-3169825 | None:intergenic | 35.0% | |
| TATGATCATGTGGGTATGAA+GGG | - | chr5.4:3170040-3170059 | MS.gene058126:CDS | 35.0% | |
| TCCAATCTCTCCAAAATCTT+AGG | + | chr5.4:3170148-3170167 | None:intergenic | 35.0% | |
| TCTTGAGCATAATAGTCCAT+TGG | + | chr5.4:3170502-3170521 | None:intergenic | 35.0% | |
| TTGGAGGAATATGATCATGT+GGG | - | chr5.4:3170031-3170050 | MS.gene058126:CDS | 35.0% | |
| TTTAGGTATGACCCTTATGT+GGG | - | chr5.4:3169998-3170017 | MS.gene058126:CDS | 35.0% | |
| TTTGGAGGAATATGATCATG+TGG | - | chr5.4:3170030-3170049 | MS.gene058126:CDS | 35.0% | |
| ! | ACAAGGGAATCCTAAGATTT+TGG | - | chr5.4:3170135-3170154 | MS.gene058126:CDS | 35.0% |
| ! | ATGGACTATTATGCTCAAGA+TGG | - | chr5.4:3170502-3170521 | MS.gene058126:CDS | 35.0% |
| ! | CTCTTTGTTTGAAGATTCTG+TGG | - | chr5.4:3170237-3170256 | MS.gene058126:CDS | 35.0% |
| ! | GAAATTAGGGTATAGGGTTT+TGG | - | chr5.4:3169814-3169833 | MS.gene058126:CDS | 35.0% |
| ! | GTTACTGAAATTTTCCTAGC+AGG | + | chr5.4:3170568-3170587 | None:intergenic | 35.0% |
| ! | TCCTAGACTCTCTATTGATT+GGG | - | chr5.4:3170282-3170301 | MS.gene058126:CDS | 35.0% |
| ! | TTTTGGTGGAGATTATCCAA+TGG | - | chr5.4:3170483-3170502 | MS.gene058126:CDS | 35.0% |
| !! | TCCTAAGATTTTGGAGAGAT+TGG | - | chr5.4:3170144-3170163 | MS.gene058126:CDS | 35.0% |
| !! | TTATGTGGGGAAGTTGTTTT+TGG | - | chr5.4:3170012-3170031 | MS.gene058126:CDS | 35.0% |
| !! | TTTTAGGTATGACCCTTATG+TGG | - | chr5.4:3169997-3170016 | MS.gene058126:CDS | 35.0% |
| !!! | TGATAAGGAAGAGAGTGTTT+TGG | - | chr5.4:3169910-3169929 | MS.gene058126:CDS | 35.0% |
| AAAATCTCACCAGCAGACAA+CGG | + | chr5.4:3169854-3169873 | None:intergenic | 40.0% | |
| AACGCATTTGTGAACTTCGA+AGG | + | chr5.4:3169390-3169409 | None:intergenic | 40.0% | |
| AACGTAACAGTGAGTTACAC+CGG | + | chr5.4:3169513-3169532 | None:intergenic | 40.0% | |
| AAGAGCGATTGTTGCTCTAA+CGG | - | chr5.4:3170430-3170449 | MS.gene058126:CDS | 40.0% | |
| ACTTCGAAGGAGTAGTTTGA+TGG | + | chr5.4:3169377-3169396 | None:intergenic | 40.0% | |
| ATGATCATGTGGGTATGAAG+GGG | - | chr5.4:3170041-3170060 | MS.gene058126:CDS | 40.0% | |
| CAAGGTTGTGAAGATGTTAC+AGG | - | chr5.4:3170400-3170419 | MS.gene058126:CDS | 40.0% | |
| CTATTATGCTCAAGATGGAG+GGG | - | chr5.4:3170507-3170526 | MS.gene058126:CDS | 40.0% | |
| GACTATTATGCTCAAGATGG+AGG | - | chr5.4:3170505-3170524 | MS.gene058126:CDS | 40.0% | |
| GATTTCTCTGCTATTGCTCT+TGG | - | chr5.4:3169569-3169588 | MS.gene058126:CDS | 40.0% | |
| GGTAAAAGGGTTATTCTTGC+TGG | - | chr5.4:3169743-3169762 | MS.gene058126:CDS | 40.0% | |
| GTAACTCACTGTTACGTTCT+CGG | - | chr5.4:3169515-3169534 | MS.gene058126:CDS | 40.0% | |
| GTCCTAGACTCTCTATTGAT+TGG | - | chr5.4:3170281-3170300 | MS.gene058126:CDS | 40.0% | |
| TACCTAAAAGCCTTAATCCC+CGG | + | chr5.4:3169986-3170005 | None:intergenic | 40.0% | |
| TCGAAGTTCACAAATGCGTT+TGG | - | chr5.4:3169390-3169409 | MS.gene058126:CDS | 40.0% | |
| TGATGGAAGGATTGAGATTG+CGG | + | chr5.4:3169360-3169379 | None:intergenic | 40.0% | |
| TTAGGTATGACCCTTATGTG+GGG | - | chr5.4:3169999-3170018 | MS.gene058126:CDS | 40.0% | |
| TTGAAGATTCTGTGGATGCT+TGG | - | chr5.4:3170245-3170264 | MS.gene058126:CDS | 40.0% | |
| ! | AGCGTTTATGATAGCGAATC+CGG | - | chr5.4:3169964-3169983 | MS.gene058126:CDS | 40.0% |
| ! | CCTAGACTCTCTATTGATTG+GGG | - | chr5.4:3170283-3170302 | MS.gene058126:CDS | 40.0% |
| ! | GGACTATTCAGTTTGCTTCT+GGG | - | chr5.4:3169765-3169784 | MS.gene058126:CDS | 40.0% |
| ! | GGATAAGAGAGTACATGAGA+AGG | + | chr5.4:3169466-3169485 | None:intergenic | 40.0% |
| ! | TGAGGATTGAATCTGGGATT+TGG | + | chr5.4:3169319-3169338 | None:intergenic | 40.0% |
| ! | TGTCTGCTGGTGAGATTTTA+GGG | - | chr5.4:3169855-3169874 | MS.gene058126:CDS | 40.0% |
| ! | TTGTCTGCTGGTGAGATTTT+AGG | - | chr5.4:3169854-3169873 | MS.gene058126:CDS | 40.0% |
| !! | AGAAACAGTGATGGTGTTGT+TGG | + | chr5.4:3169258-3169277 | None:intergenic | 40.0% |
| !! | GAAACAGTGATGGTGTTGTT+GGG | + | chr5.4:3169257-3169276 | None:intergenic | 40.0% |
| !! | TCAGTTTGCTTCTGGGATTA+GGG | - | chr5.4:3169772-3169791 | MS.gene058126:CDS | 40.0% |
| !! | TGCAATTTTGAAAGCGAAGG+AGG | - | chr5.4:3170075-3170094 | MS.gene058126:CDS | 40.0% |
| !! | TTCAGTTTGCTTCTGGGATT+AGG | - | chr5.4:3169771-3169790 | MS.gene058126:CDS | 40.0% |
| !!! | ATGGTGTTGTTGGGTTTTTC+AGG | + | chr5.4:3169248-3169267 | None:intergenic | 40.0% |
| !!! | GAGTGTTTTGGTGTTTGTGT+CGG | - | chr5.4:3169922-3169941 | MS.gene058126:CDS | 40.0% |
| !!! | TTGGGTTTTTCAGGTTGTTC+TGG | + | chr5.4:3169239-3169258 | None:intergenic | 40.0% |
| ACCAAAATCTTCAGTCGCCT+TGG | + | chr5.4:3170470-3170489 | None:intergenic | 45.0% | |
| AGGTGGTGAAGATATCAGAG+AGG | + | chr5.4:3169487-3169506 | None:intergenic | 45.0% | |
| AGTACATGAGAAGGCCTTCA+GGG | + | chr5.4:3169457-3169476 | None:intergenic | 45.0% | |
| AGTGCTATCTCAGCCTCAAA+AGG | + | chr5.4:3170337-3170356 | None:intergenic | 45.0% | |
| ATCGCTCTTCAATTCCCTGA+AGG | - | chr5.4:3169440-3169459 | MS.gene058126:CDS | 45.0% | |
| CCCCAATCAATAGAGAGTCT+AGG | + | chr5.4:3170286-3170305 | None:intergenic | 45.0% | |
| CGAAGGAGTAGTTTGATGGA+AGG | + | chr5.4:3169373-3169392 | None:intergenic | 45.0% | |
| GGGGAAAGAGTTGGATGATA+AGG | - | chr5.4:3169895-3169914 | MS.gene058126:CDS | 45.0% | |
| GGTCGTTGAGGATTGAATCT+GGG | + | chr5.4:3169325-3169344 | None:intergenic | 45.0% | |
| GTTCTCGGTGATGTTACCTA+TGG | - | chr5.4:3169530-3169549 | MS.gene058126:CDS | 45.0% | |
| TAGGGACTTTGGGTAGACAA+GGG | - | chr5.4:3170119-3170138 | MS.gene058126:CDS | 45.0% | |
| TTAGGGACTTTGGGTAGACA+AGG | - | chr5.4:3170118-3170137 | MS.gene058126:CDS | 45.0% | |
| TTGAAGAGCGATGCGTTTAG+CGG | + | chr5.4:3169432-3169451 | None:intergenic | 45.0% | |
| ! | AAGGCGACTGAAGATTTTGG+TGG | - | chr5.4:3170469-3170488 | MS.gene058126:CDS | 45.0% |
| ! | ATAGCACTGGGATTGATACC+TGG | - | chr5.4:3170349-3170368 | MS.gene058126:CDS | 45.0% |
| ! | ATCCGGGGATTAAGGCTTTT+AGG | - | chr5.4:3169981-3170000 | MS.gene058126:CDS | 45.0% |
| ! | ATTTTCCTAGCAGGACGACT+AGG | + | chr5.4:3170559-3170578 | None:intergenic | 45.0% |
| ! | CGTTTATGATAGCGAATCCG+GGG | - | chr5.4:3169966-3169985 | MS.gene058126:CDS | 45.0% |
| ! | GCGTTTATGATAGCGAATCC+GGG | - | chr5.4:3169965-3169984 | MS.gene058126:CDS | 45.0% |
| ! | GGGACTATTCAGTTTGCTTC+TGG | - | chr5.4:3169764-3169783 | MS.gene058126:CDS | 45.0% |
| ! | TTTGAGGCTGAGATAGCACT+GGG | - | chr5.4:3170337-3170356 | MS.gene058126:CDS | 45.0% |
| !! | ACCAGTTCTGACTCCTTTTG+AGG | - | chr5.4:3170321-3170340 | MS.gene058126:CDS | 45.0% |
| !! | TTTTGAAAGCGAAGGAGGCA+AGG | - | chr5.4:3170080-3170099 | MS.gene058126:CDS | 45.0% |
| !!! | AGGAATTGGGGCGTTGTTTT+AGG | - | chr5.4:3170100-3170119 | MS.gene058126:CDS | 45.0% |
| !!! | GGAATTGGGGCGTTGTTTTA+GGG | - | chr5.4:3170101-3170120 | MS.gene058126:CDS | 45.0% |
| !!! | GGCGTTGTTTTAGGGACTTT+GGG | - | chr5.4:3170109-3170128 | MS.gene058126:CDS | 45.0% |
| !!! | GTTTTGGTGTTTGTGTCGGA+TGG | - | chr5.4:3169926-3169945 | MS.gene058126:CDS | 45.0% |
| !!! | TGTGGGGAAGTTGTTTTTGG+AGG | - | chr5.4:3170015-3170034 | MS.gene058126:CDS | 45.0% |
| !!! | TTTTGAGGCTGAGATAGCAC+TGG | - | chr5.4:3170336-3170355 | MS.gene058126:CDS | 45.0% |
| AAAAGCCTAGTCGTCCTGCT+AGG | - | chr5.4:3170551-3170570 | MS.gene058126:CDS | 50.0% | |
| AAGCGAAGGAGGCAAGGAAT+TGG | - | chr5.4:3170086-3170105 | MS.gene058126:CDS | 50.0% | |
| AGCGAAGGAGGCAAGGAATT+GGG | - | chr5.4:3170087-3170106 | MS.gene058126:CDS | 50.0% | |
| CACTGGGATTGATACCTGGA+TGG | - | chr5.4:3170353-3170372 | MS.gene058126:CDS | 50.0% | |
| GAGTACATGAGAAGGCCTTC+AGG | + | chr5.4:3169458-3169477 | None:intergenic | 50.0% | |
| GATAGCGAATCCGGGGATTA+AGG | - | chr5.4:3169973-3169992 | MS.gene058126:CDS | 50.0% | |
| GATATCTTCACCACCTTCGC+CGG | - | chr5.4:3169491-3169510 | MS.gene058126:CDS | 50.0% | |
| GCCTCAAAAGGAGTCAGAAC+TGG | + | chr5.4:3170325-3170344 | None:intergenic | 50.0% | |
| GGGATTGATACCTGGATGGT+GGG | - | chr5.4:3170357-3170376 | MS.gene058126:CDS | 50.0% | |
| GGGTCGTTGAGGATTGAATC+TGG | + | chr5.4:3169326-3169345 | None:intergenic | 50.0% | |
| TAGGGCTGTGAAGCCTGAAT+TGG | - | chr5.4:3169790-3169809 | MS.gene058126:CDS | 50.0% | |
| TCCAACTCTTTCCCCACCTT+CGG | + | chr5.4:3169890-3169909 | None:intergenic | 50.0% | |
| TGGGATTGATACCTGGATGG+TGG | - | chr5.4:3170356-3170375 | MS.gene058126:CDS | 50.0% | |
| TGGTGTTTGTGTCGGATGGA+AGG | - | chr5.4:3169930-3169949 | MS.gene058126:CDS | 50.0% | |
| TGTTGCTCTAACGGTAGCTG+CGG | - | chr5.4:3170439-3170458 | MS.gene058126:CDS | 50.0% | |
| ! | AGATTGCGGCGTTGAGAAGT+GGG | + | chr5.4:3169346-3169365 | None:intergenic | 50.0% |
| ! | GCCAAGGCGACTGAAGATTT+TGG | - | chr5.4:3170466-3170485 | MS.gene058126:CDS | 50.0% |
| ! | TGAGTTTTCTCCCACCATCC+AGG | + | chr5.4:3170370-3170389 | None:intergenic | 50.0% |
| ! | TTTAGGGTGTACTGCACCGA+AGG | - | chr5.4:3169871-3169890 | MS.gene058126:CDS | 50.0% |
| !!! | GGGCGTTGTTTTAGGGACTT+TGG | - | chr5.4:3170108-3170127 | MS.gene058126:CDS | 50.0% |
| AAGAGCGATGCGTTTAGCGG+CGG | + | chr5.4:3169429-3169448 | None:intergenic | 55.0% | |
| ACAGTGAGTTACACCGGCGA+AGG | + | chr5.4:3169507-3169526 | None:intergenic | 55.0% | |
| ACCGAAGGTGGGGAAAGAGT+TGG | - | chr5.4:3169886-3169905 | MS.gene058126:CDS | 55.0% | |
| ATGCTCAAGATGGAGGGGAG+TGG | - | chr5.4:3170512-3170531 | MS.gene058126:CDS | 55.0% | |
| ATGTGGGTATGAAGGGGTCG+AGG | - | chr5.4:3170047-3170066 | MS.gene058126:CDS | 55.0% | |
| CGTTGAGAAGTGGGTCGTTG+AGG | + | chr5.4:3169337-3169356 | None:intergenic | 55.0% | |
| GCGAAGGAGGCAAGGAATTG+GGG | - | chr5.4:3170088-3170107 | MS.gene058126:CDS | 55.0% | |
| GTTGCTCTAACGGTAGCTGC+GGG | - | chr5.4:3170440-3170459 | MS.gene058126:CDS | 55.0% | |
| TTGCTCTAACGGTAGCTGCG+GGG | - | chr5.4:3170441-3170460 | MS.gene058126:CDS | 55.0% | |
| ! | GAGATTGCGGCGTTGAGAAG+TGG | + | chr5.4:3169347-3169366 | None:intergenic | 55.0% |
| AGGGTGTACTGCACCGAAGG+TGG | - | chr5.4:3169874-3169893 | MS.gene058126:CDS | 60.0% | |
| CAGTCGAAGCCGTTGTCTGC+TGG | - | chr5.4:3169842-3169861 | MS.gene058126:CDS | 60.0% | |
| GCAGACAACGGCTTCGACTG+CGG | + | chr5.4:3169842-3169861 | None:intergenic | 60.0% | |
| GGGTGTACTGCACCGAAGGT+GGG | - | chr5.4:3169875-3169894 | MS.gene058126:CDS | 60.0% | |
| GGTGTACTGCACCGAAGGTG+GGG | - | chr5.4:3169876-3169895 | MS.gene058126:CDS | 60.0% | |
| GTGAGTTACACCGGCGAAGG+TGG | + | chr5.4:3169504-3169523 | None:intergenic | 60.0% | |
| TGCGTTTAGCGGCGGTGGAA+CGG | + | chr5.4:3169421-3169440 | None:intergenic | 60.0% | |
| AGCGATGCGTTTAGCGGCGG+TGG | + | chr5.4:3169426-3169445 | None:intergenic | 65.0% | |
| CGGTAGCTGCGGGGATGCCA+AGG | - | chr5.4:3170450-3170469 | MS.gene058126:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 3169227 | 3170618 | 3169227 | ID=MS.gene058126 |
| chr5.4 | mRNA | 3169227 | 3170618 | 3169227 | ID=MS.gene058126.t1;Parent=MS.gene058126 |
| chr5.4 | exon | 3169227 | 3170618 | 3169227 | ID=MS.gene058126.t1.exon1;Parent=MS.gene058126.t1 |
| chr5.4 | CDS | 3169227 | 3170618 | 3169227 | ID=cds.MS.gene058126.t1;Parent=MS.gene058126.t1 |
| Gene Sequence |
| Protein sequence |
