Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050885.t1 | XP_003626275.1 | 87.7 | 685 | 79 | 2 | 1 | 682 | 1 | 683 | 5.30E-248 | 867.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050885.t1 | Q8S9K3 | 30.4 | 253 | 132 | 8 | 128 | 375 | 93 | 306 | 2.0e-17 | 92.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050885.t1 | G7KYM5 | 87.7 | 685 | 79 | 2 | 1 | 682 | 1 | 683 | 3.8e-248 | 867.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene050885 | 0.839348 | 1.67E-57 | -1.69E-46 |
| MS.gene050885 | MS.gene053226 | 0.800187 | 1.62E-48 | -1.69E-46 |
| MS.gene050885 | MS.gene056403 | 0.850849 | 1.30E-60 | -1.69E-46 |
| MS.gene050885 | MS.gene056605 | 0.843164 | 1.66E-58 | -1.69E-46 |
| MS.gene050885 | MS.gene059935 | 0.824821 | 6.56E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene060830 | 0.831995 | 1.22E-55 | -1.69E-46 |
| MS.gene050885 | MS.gene062309 | 0.815986 | 6.98E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene06323 | 0.811434 | 7.02E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene064040 | 0.811264 | 7.64E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene069880 | 0.804728 | 1.88E-49 | -1.69E-46 |
| MS.gene050885 | MS.gene071987 | 0.808035 | 3.77E-50 | -1.69E-46 |
| MS.gene050885 | MS.gene072478 | 0.908348 | 1.89E-81 | -1.69E-46 |
| MS.gene050885 | MS.gene072716 | 0.812626 | 3.86E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene07314 | 0.823944 | 1.05E-53 | -1.69E-46 |
| MS.gene050885 | MS.gene07318 | 0.811809 | 5.81E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene073637 | 0.827336 | 1.65E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene07393 | 0.821912 | 3.14E-53 | -1.69E-46 |
| MS.gene050885 | MS.gene20449 | 0.809207 | 2.12E-50 | -1.69E-46 |
| MS.gene050885 | MS.gene20679 | 0.813565 | 2.40E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene21172 | 0.825486 | 4.57E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene21232 | 0.829211 | 5.84E-55 | -1.69E-46 |
| MS.gene050885 | MS.gene21234 | 0.804748 | 1.86E-49 | -1.69E-46 |
| MS.gene050885 | MS.gene21700 | 0.825853 | 3.74E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene21926 | 0.815672 | 8.20E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene22270 | 0.808314 | 3.29E-50 | -1.69E-46 |
| MS.gene050885 | MS.gene24189 | 0.836401 | 9.56E-57 | -1.69E-46 |
| MS.gene050885 | MS.gene25207 | 0.818073 | 2.37E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene27041 | 0.801027 | 1.09E-48 | -1.69E-46 |
| MS.gene050885 | MS.gene27921 | 0.814423 | 1.55E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene28319 | 0.855362 | 6.64E-62 | -1.69E-46 |
| MS.gene050885 | MS.gene29345 | 0.885031 | 1.15E-71 | -1.69E-46 |
| MS.gene050885 | MS.gene32091 | 0.840155 | 1.03E-57 | -1.69E-46 |
| MS.gene050885 | MS.gene38754 | 0.818802 | 1.62E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene39195 | 0.834077 | 3.69E-56 | -1.69E-46 |
| MS.gene050885 | MS.gene40019 | 0.804855 | 1.77E-49 | -1.69E-46 |
| MS.gene050885 | MS.gene41606 | 0.825526 | 4.47E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene42882 | 0.844238 | 8.56E-59 | -1.69E-46 |
| MS.gene050885 | MS.gene46475 | 0.855265 | 7.08E-62 | -1.69E-46 |
| MS.gene050885 | MS.gene47878 | 0.815893 | 7.32E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene48323 | 0.840744 | 7.23E-58 | -1.69E-46 |
| MS.gene050885 | MS.gene48368 | 0.837978 | 3.78E-57 | -1.69E-46 |
| MS.gene050885 | MS.gene49310 | 0.817792 | 2.74E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene50615 | 0.831134 | 1.98E-55 | -1.69E-46 |
| MS.gene050885 | MS.gene52941 | 0.820788 | 5.70E-53 | -1.69E-46 |
| MS.gene050885 | MS.gene53345 | 0.825572 | 4.36E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene55860 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene050885 | MS.gene56868 | 0.827808 | 1.28E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene58161 | 0.807461 | 5.00E-50 | -1.69E-46 |
| MS.gene050885 | MS.gene59380 | 0.820932 | 5.28E-53 | -1.69E-46 |
| MS.gene050885 | MS.gene61056 | 0.835394 | 1.72E-56 | -1.69E-46 |
| MS.gene050885 | MS.gene61979 | 0.816449 | 5.50E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene61980 | 0.824656 | 7.17E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene61999 | 0.805357 | 1.39E-49 | -1.69E-46 |
| MS.gene050885 | MS.gene62096 | 0.826416 | 2.75E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene63988 | 0.800279 | 1.55E-48 | -1.69E-46 |
| MS.gene050885 | MS.gene64191 | 0.834505 | 2.88E-56 | -1.69E-46 |
| MS.gene050885 | MS.gene68633 | 0.81006 | 1.39E-50 | -1.69E-46 |
| MS.gene050885 | MS.gene71825 | 0.824061 | 9.90E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene71826 | 0.816631 | 5.01E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene73825 | 0.812911 | 3.34E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene74503 | 0.809555 | 1.79E-50 | -1.69E-46 |
| MS.gene050885 | MS.gene75146 | 0.827915 | 1.20E-54 | -1.69E-46 |
| MS.gene050885 | MS.gene75187 | 0.816422 | 5.57E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene76002 | 0.802188 | 6.32E-49 | -1.69E-46 |
| MS.gene050885 | MS.gene78591 | 0.945047 | 6.33E-104 | -1.69E-46 |
| MS.gene050885 | MS.gene79253 | 0.803783 | 2.96E-49 | -1.69E-46 |
| MS.gene050885 | MS.gene79409 | 0.803543 | 3.32E-49 | -1.69E-46 |
| MS.gene050885 | MS.gene80570 | 0.821835 | 3.27E-53 | -1.69E-46 |
| MS.gene050885 | MS.gene81498 | 0.81413 | 1.80E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene83091 | 0.812023 | 5.22E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene84040 | 0.800492 | 1.41E-48 | -1.69E-46 |
| MS.gene050885 | MS.gene85160 | 0.819825 | 9.48E-53 | -1.69E-46 |
| MS.gene050885 | MS.gene90863 | 0.857073 | 2.09E-62 | -1.69E-46 |
| MS.gene050885 | MS.gene95472 | 0.833827 | 4.26E-56 | -1.69E-46 |
| MS.gene050885 | MS.gene98953 | 0.814877 | 1.23E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050885.t1 | MTR_7g113360 | 94.369 | 888 | 18 | 3 | 1 | 858 | 1 | 886 | 0.0 | 1690 |
| MS.gene050885.t1 | MTR_1g032260 | 38.806 | 335 | 126 | 8 | 122 | 406 | 59 | 364 | 3.45e-65 | 227 |
| MS.gene050885.t1 | MTR_6g069400 | 39.116 | 294 | 145 | 8 | 124 | 406 | 65 | 335 | 1.08e-52 | 191 |
| MS.gene050885.t1 | MTR_6g069400 | 47.222 | 72 | 34 | 2 | 333 | 402 | 335 | 404 | 2.70e-15 | 80.1 |
| MS.gene050885.t1 | MTR_6g069400 | 38.889 | 90 | 34 | 2 | 327 | 404 | 371 | 451 | 2.43e-11 | 67.4 |
| MS.gene050885.t1 | MTR_7g087047 | 34.615 | 286 | 135 | 9 | 125 | 406 | 78 | 315 | 2.17e-40 | 161 |
| MS.gene050885.t1 | MTR_7g087047 | 42.282 | 149 | 73 | 3 | 261 | 406 | 2 | 140 | 1.80e-30 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050885.t1 | AT1G55040 | 52.510 | 737 | 269 | 20 | 6 | 703 | 5 | 699 | 0.0 | 617 |
| MS.gene050885.t1 | AT1G70650 | 34.648 | 355 | 161 | 7 | 125 | 441 | 44 | 365 | 2.41e-59 | 210 |
| MS.gene050885.t1 | AT1G70650 | 33.333 | 363 | 155 | 7 | 125 | 441 | 44 | 365 | 3.94e-52 | 192 |
| MS.gene050885.t1 | AT1G48570 | 36.765 | 340 | 148 | 10 | 125 | 419 | 60 | 377 | 4.69e-51 | 186 |
| MS.gene050885.t1 | AT1G48570 | 51.351 | 74 | 36 | 0 | 333 | 406 | 364 | 437 | 2.86e-17 | 85.9 |
| MS.gene050885.t1 | AT5G17790 | 33.987 | 306 | 156 | 9 | 128 | 428 | 93 | 357 | 6.49e-36 | 146 |
Find 217 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAAAATGGTGCAGGATTT+AGG | 0.123255 | 7.1:+3045537 | MS.gene050885:CDS |
| AAACAGGTTGTTCGGGAATT+TGG | 0.177849 | 7.1:-3045317 | None:intergenic |
| CTTGGGTTTGATCCTATTAA+TGG | 0.181047 | 7.1:+3046535 | MS.gene050885:CDS |
| AGAACCAAAGCTTAATTTCT+TGG | 0.211002 | 7.1:-3048097 | None:intergenic |
| CATGCTGCTTGTCTTAATTT+CGG | 0.227175 | 7.1:+3045624 | MS.gene050885:CDS |
| GAGAAGAAGGTTTAGGGTTT+GGG | 0.230724 | 7.1:-3045176 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7.1:-3048386 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7.1:-3048470 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7.1:-3048554 | None:intergenic |
| AAGGTTTAGGGTTTGGGTTT+TGG | 0.252849 | 7.1:-3045170 | None:intergenic |
| GGATCGTCTCGGAAATCTTA+TGG | 0.256725 | 7.1:+3048627 | MS.gene050885:CDS |
| GCAGAGAGAGAAGAAGGTTT+AGG | 0.258649 | 7.1:-3045183 | None:intergenic |
| ATCACTGGAGGAGGGAGATT+TGG | 0.276652 | 7.1:-3046661 | None:intergenic |
| AGAATCTGCATATTCAAAAT+TGG | 0.286698 | 7.1:-3047578 | None:intergenic |
| AATAAAAGTAAAACAGCTTC+TGG | 0.290479 | 7.1:+3047913 | MS.gene050885:CDS |
| ATAAAATGGTGCAGGATTTA+GGG | 0.292247 | 7.1:+3045538 | MS.gene050885:CDS |
| TTCAGAAACAGAAGACTCTT+TGG | 0.299699 | 7.1:+3047846 | MS.gene050885:CDS |
| CAGAGAGAGAAGAAGGTTTA+GGG | 0.303482 | 7.1:-3045182 | None:intergenic |
| AAATCATCAAACCCTGTTCT+AGG | 0.305189 | 7.1:-3047736 | None:intergenic |
| AGAGAAGAAGGTTTAGGGTT+TGG | 0.323448 | 7.1:-3045177 | None:intergenic |
| AAAGGGAACAGACATGATTC+TGG | 0.325410 | 7.1:+3048201 | MS.gene050885:CDS |
| GAGGCAGGATATTCAAGTTT+TGG | 0.331296 | 7.1:+3045913 | MS.gene050885:CDS |
| GACCTCTGCCTTTCCTTCTC+TGG | 0.332244 | 7.1:-3048071 | None:intergenic |
| TATTCATCCAGGCAAAATAA+AGG | 0.336980 | 7.1:+3048183 | MS.gene050885:CDS |
| GAGGAAGGATGAAGATAAAA+TGG | 0.341906 | 7.1:+3045524 | MS.gene050885:CDS |
| TCCCGTCCAACACGTCTCTT+TGG | 0.350726 | 7.1:-3046724 | None:intergenic |
| CCCAAGAGACAGTTGCTTCC+AGG | 0.351064 | 7.1:+3047187 | MS.gene050885:CDS |
| GACGAAGATGTTGTTGTTGT+TGG | 0.352381 | 7.1:-3045363 | None:intergenic |
| ATGCTGCTTGTCTTAATTTC+GGG | 0.354542 | 7.1:+3045625 | MS.gene050885:CDS |
| TAACAGCCAACCTGTGGAAT+TGG | 0.356893 | 7.1:+3045413 | MS.gene050885:CDS |
| TCATCATCCCGGAAATCTTA+TGG | 0.357332 | 7.1:+3048462 | MS.gene050885:CDS |
| TCGTCATCCCGGAAATCTTA+TGG | 0.358923 | 7.1:+3048546 | MS.gene050885:CDS |
| GGATCATCCCGGAAATCTTA+TGG | 0.366429 | 7.1:+3048378 | MS.gene050885:CDS |
| GGAGGAGGTTGTTTCACCTT+TGG | 0.369295 | 7.1:-3046697 | None:intergenic |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7.1:-3048385 | None:intergenic |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7.1:-3048469 | None:intergenic |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7.1:-3048553 | None:intergenic |
| GGAGGGAGATTTGGATCAAT+AGG | 0.378515 | 7.1:-3046652 | None:intergenic |
| GATTCAATTGATGGAGAGAT+TGG | 0.383239 | 7.1:+3045476 | MS.gene050885:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7.1:+3048398 | MS.gene050885:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7.1:+3048482 | MS.gene050885:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7.1:+3048566 | MS.gene050885:CDS |
| ACGCCCACCTGATGAATTCC+TGG | 0.384843 | 7.1:+3047429 | MS.gene050885:CDS |
| AGCTTCCATTCTTGAACTAC+TGG | 0.385556 | 7.1:-3047809 | None:intergenic |
| CTCTTCAACGAATTCGTGCT+TGG | 0.388472 | 7.1:+3045271 | MS.gene050885:CDS |
| GGAGGTTGTTTCACCTTTGG+TGG | 0.390138 | 7.1:-3046694 | None:intergenic |
| CTGCCCATCTTATTAAAGTT+AGG | 0.390467 | 7.1:-3047487 | None:intergenic |
| ATAATCAAGTTCATCTTCCT+TGG | 0.394846 | 7.1:-3047986 | None:intergenic |
| TAGAAATGCTAGAGGGTCTC+AGG | 0.395388 | 7.1:+3048317 | MS.gene050885:CDS |
| TCCTGGAAGCAACTGTCTCT+TGG | 0.396449 | 7.1:-3047188 | None:intergenic |
| AGGACTGATGATCCATTAAT+AGG | 0.396782 | 7.1:-3046547 | None:intergenic |
| TGGACCTAACTTTAATAAGA+TGG | 0.398446 | 7.1:+3047483 | MS.gene050885:CDS |
| GTCATCAAAGTCAAAATTCC+AGG | 0.409210 | 7.1:-3047530 | None:intergenic |
| TGTATTCTTGCGAACTGAAC+GGG | 0.412398 | 7.1:-3047950 | None:intergenic |
| GATTCTGAAACAGGTTGTTC+GGG | 0.413379 | 7.1:-3045324 | None:intergenic |
| TGATTCTGAAACAGGTTGTT+CGG | 0.413387 | 7.1:-3045325 | None:intergenic |
| AGAAGGAACTTTACTAAAGA+TGG | 0.415912 | 7.1:+3048225 | MS.gene050885:CDS |
| CCTGGAAGCAACTGTCTCTT+GGG | 0.416125 | 7.1:-3047187 | None:intergenic |
| TTTACTAAAGATGGAAAGTC+TGG | 0.419164 | 7.1:+3048234 | MS.gene050885:CDS |
| GACAGTTGCTTCCAGGAGAA+TGG | 0.419362 | 7.1:+3047194 | MS.gene050885:CDS |
| AACCCTGTTCTAGGTCTAGA+AGG | 0.422985 | 7.1:-3047727 | None:intergenic |
| CCAACCAAGAAATTAAGCTT+TGG | 0.427354 | 7.1:+3048093 | MS.gene050885:CDS |
| TCCATCAATTGAATCCATTC+CGG | 0.429098 | 7.1:-3045468 | None:intergenic |
| GATCGTCTCGGAAATCTTAT+GGG | 0.429943 | 7.1:+3048628 | MS.gene050885:CDS |
| AGGGTTTAAGAGCCGGCGTT+TGG | 0.434415 | 7.1:-3045118 | None:intergenic |
| GTCTTAATTTCGGGAAGGAC+CGG | 0.437259 | 7.1:+3045634 | MS.gene050885:CDS |
| CCAAAGCTTAATTTCTTGGT+TGG | 0.439853 | 7.1:-3048093 | None:intergenic |
| ACAGTTTAATAAATACAGTA+TGG | 0.440806 | 7.1:+3048719 | MS.gene050885:CDS |
| GGTGGTGGTGATTCTGAAAC+AGG | 0.440996 | 7.1:-3045333 | None:intergenic |
| GCCGGAATGGATTCAATTGA+TGG | 0.444180 | 7.1:+3045467 | MS.gene050885:CDS |
| AAGTTGAGAAATGGAAGAAT+GGG | 0.451734 | 7.1:-3045146 | None:intergenic |
| GGGATGATGTTGAGATGAAA+AGG | 0.451787 | 7.1:+3046743 | MS.gene050885:CDS |
| GGCAAGAGGTTTCCAATGCC+TGG | 0.456231 | 7.1:+3047512 | MS.gene050885:CDS |
| ATTCATCCAGGCAAAATAAA+GGG | 0.459718 | 7.1:+3048184 | MS.gene050885:CDS |
| GTTGTTGTTGGTGATGGTGG+TGG | 0.460900 | 7.1:-3045351 | None:intergenic |
| AAATCTTATGGGAATGATAG+AGG | 0.462034 | 7.1:+3048639 | MS.gene050885:CDS |
| TTGTGCATCCGTGGCCGGAA+TGG | 0.462193 | 7.1:+3045454 | MS.gene050885:CDS |
| TCGGTACATTCCCATTCTCC+TGG | 0.465682 | 7.1:-3047205 | None:intergenic |
| TCTGACGAAGATGGCAGTGC+TGG | 0.465695 | 7.1:+3048123 | MS.gene050885:CDS |
| CAACTGTCTCTTGGGACGCT+TGG | 0.467805 | 7.1:-3047179 | None:intergenic |
| GGTTGTTTCACCTTTGGTGG+AGG | 0.468414 | 7.1:-3046691 | None:intergenic |
| GTTGTTGGTGATGGTGGTGG+TGG | 0.468976 | 7.1:-3045348 | None:intergenic |
| GCGAAGAATAGGAGCGTCCC+AGG | 0.470297 | 7.1:+3047667 | MS.gene050885:CDS |
| GTTGTTGTTGTTGGTGATGG+TGG | 0.472841 | 7.1:-3045354 | None:intergenic |
| GATGTTGTTGTTGTTGGTGA+TGG | 0.474773 | 7.1:-3045357 | None:intergenic |
| GGTTCTGACTCTGACGAAGA+TGG | 0.475635 | 7.1:+3048114 | MS.gene050885:CDS |
| TTTCAGGTCGTTGTCGAGGC+AGG | 0.477432 | 7.1:+3045898 | MS.gene050885:intron |
| AAAGTCAAAATTCCAGGCAT+TGG | 0.477506 | 7.1:-3047524 | None:intergenic |
| TTTAAGGAAGCTTGTCCACC+TGG | 0.477767 | 7.1:+3045988 | MS.gene050885:CDS |
| ATGCGAATGCTACTGACACT+TGG | 0.481025 | 7.1:+3046517 | MS.gene050885:CDS |
| ACAGTTGCTTCCAGGAGAAT+GGG | 0.481216 | 7.1:+3047195 | MS.gene050885:CDS |
| GAAGTTGAGAAATGGAAGAA+TGG | 0.484391 | 7.1:-3045147 | None:intergenic |
| CATCAAACCGCTTCCGATCA+CGG | 0.489974 | 7.1:-3048428 | None:intergenic |
| CATCAAACCGCTTCCGATCA+CGG | 0.489974 | 7.1:-3048512 | None:intergenic |
| TAAATACAGTATGGATGAGA+AGG | 0.490347 | 7.1:+3048728 | MS.gene050885:CDS |
| TAGCATTTCTATAAGACTGC+CGG | 0.493085 | 7.1:-3048305 | None:intergenic |
| ACAGACTTCTGCTTCAAAAG+TGG | 0.494941 | 7.1:-3046577 | None:intergenic |
| GGACCTAACTTTAATAAGAT+GGG | 0.495914 | 7.1:+3047484 | MS.gene050885:CDS |
| TCTGAGATTGTACATGATGA+AGG | 0.496169 | 7.1:+3045570 | MS.gene050885:CDS |
| CAATGCTCGGCGTGTGGGGT+GGG | 0.496388 | 7.1:+3047633 | MS.gene050885:CDS |
| TATGAGCTAGAAACTGAAAC+AGG | 0.496805 | 7.1:+3047784 | MS.gene050885:CDS |
| GGTCCTTCTAGACCTAGAAC+AGG | 0.497216 | 7.1:+3047724 | MS.gene050885:CDS |
| GAATATGTTAATGCCGGTCC+CGG | 0.498620 | 7.1:+3047703 | MS.gene050885:CDS |
| GGCTACAAATCAAACATGTT+CGG | 0.500236 | 7.1:+3048261 | MS.gene050885:CDS |
| ACAATTGTTTCTCAAGCTGC+AGG | 0.501134 | 7.1:-3046440 | None:intergenic |
| TCTTCACCAATTCCACAGGT+TGG | 0.501674 | 7.1:-3045419 | None:intergenic |
| GGAATTTGTGCATCCGTGGC+CGG | 0.502110 | 7.1:+3045449 | MS.gene050885:CDS |
| GAAGTAACCGTGATCGGAAG+CGG | 0.504209 | 7.1:+3048421 | MS.gene050885:CDS |
| GAAGTAACCGTGATCGGAAG+CGG | 0.504209 | 7.1:+3048505 | MS.gene050885:CDS |
| AGGAACCAGTAGTTCAAGAA+TGG | 0.504785 | 7.1:+3047804 | MS.gene050885:CDS |
| AGCATTTCTATAAGACTGCC+GGG | 0.507044 | 7.1:-3048304 | None:intergenic |
| GTAGGCAGAAATTTGATGAC+AGG | 0.508546 | 7.1:+3048682 | MS.gene050885:CDS |
| ACAATGCTCGGCGTGTGGGG+TGG | 0.508676 | 7.1:+3047632 | MS.gene050885:CDS |
| TTCAAAACGACAATGGCGTT+CGG | 0.508901 | 7.1:+3045075 | None:intergenic |
| AAGGGAACAGACATGATTCT+GGG | 0.508952 | 7.1:+3048202 | MS.gene050885:CDS |
| AATTGAATCCATTCCGGCCA+CGG | 0.511781 | 7.1:-3045462 | None:intergenic |
| AAGCTTGTCCACCTGGATGA+AGG | 0.515198 | 7.1:+3045995 | MS.gene050885:CDS |
| GGATGAAGATAAAATGGTGC+AGG | 0.516341 | 7.1:+3045530 | MS.gene050885:CDS |
| GATAACAATGCTCGGCGTGT+GGG | 0.516457 | 7.1:+3047628 | MS.gene050885:CDS |
| GGATGATGTTGAGATGAAAA+GGG | 0.519453 | 7.1:+3046744 | MS.gene050885:CDS |
| TCCAAAGAGACGTGTTGGAC+GGG | 0.520056 | 7.1:+3046723 | MS.gene050885:CDS |
| TTTGAATATGCAGATTCTCA+TGG | 0.520470 | 7.1:+3047583 | MS.gene050885:CDS |
| TGTTCTAGGTCTAGAAGGAC+CGG | 0.521263 | 7.1:-3047722 | None:intergenic |
| TATTCGTCATCGTGGGACCC+TGG | 0.522679 | 7.1:-3047685 | None:intergenic |
| AAACAGAAGACTCTTTGGAC+TGG | 0.524393 | 7.1:+3047851 | MS.gene050885:CDS |
| TCTTTCTTCACCAATTCCAC+AGG | 0.527330 | 7.1:-3045423 | None:intergenic |
| CACTTACATCTCCTTCATCC+AGG | 0.527939 | 7.1:-3046006 | None:intergenic |
| AGACGAGCAGAGAGAGAAGA+AGG | 0.529212 | 7.1:-3045189 | None:intergenic |
| GCTTCAAAAGTGGCTTGTTG+AGG | 0.532551 | 7.1:-3046567 | None:intergenic |
| CTCAGGGAAGTAACCGTGAT+CGG | 0.533292 | 7.1:+3048415 | MS.gene050885:CDS |
| CTCAGGGAAGTAACCGTGAT+CGG | 0.533292 | 7.1:+3048499 | MS.gene050885:CDS |
| TTTCTGCTGCCGACCAGAGA+AGG | 0.538950 | 7.1:+3048058 | MS.gene050885:CDS |
| AGGTCTAGAAGGACCGGGAC+CGG | 0.544783 | 7.1:-3047716 | None:intergenic |
| ATTCGTCATCGTGGGACCCT+GGG | 0.546845 | 7.1:-3047684 | None:intergenic |
| CTCCAAAGAGACGTGTTGGA+CGG | 0.552538 | 7.1:+3046722 | MS.gene050885:CDS |
| TTTCTTCAGATAACAATGCT+CGG | 0.552686 | 7.1:+3047620 | MS.gene050885:CDS |
| CATCAAACCTCTTCTTATCA+CGG | 0.553176 | 7.1:-3048347 | None:intergenic |
| CTCTTCTTCTCACCAAACGC+CGG | 0.559614 | 7.1:+3045106 | MS.gene050885:CDS |
| GATGACAGGGAGCACGGCAG+AGG | 0.560359 | 7.1:+3048696 | MS.gene050885:CDS |
| CGTCTCTTTGGAGTAGGAGG+AGG | 0.560622 | 7.1:-3046712 | None:intergenic |
| AGATAACAATGCTCGGCGTG+TGG | 0.561943 | 7.1:+3047627 | MS.gene050885:CDS |
| TAAATGAGGCATATTCATCC+AGG | 0.563376 | 7.1:+3048172 | MS.gene050885:CDS |
| GAGGGTCTCGAGGAAATGAC+CGG | 0.565783 | 7.1:+3048658 | MS.gene050885:CDS |
| CATACCTCAACAAATCAAAC+CGG | 0.566974 | 7.1:-3045653 | None:intergenic |
| AAATACAGTATGGATGAGAA+GGG | 0.567899 | 7.1:+3048729 | MS.gene050885:CDS |
| TACATCTTTCTCTCGATCCA+AGG | 0.570204 | 7.1:+3047969 | MS.gene050885:CDS |
| TGCGAATGCTACTGACACTT+GGG | 0.570349 | 7.1:+3046518 | MS.gene050885:CDS |
| CATCAAATTTCTGCCTACTC+CGG | 0.570481 | 7.1:-3048677 | None:intergenic |
| GACCAGAGAAGGAAAGGCAG+AGG | 0.570783 | 7.1:+3048069 | MS.gene050885:CDS |
| ATGTATTCTTGCGAACTGAA+CGG | 0.571403 | 7.1:-3047951 | None:intergenic |
| GCAACTTCTTGAATTACAGA+AGG | 0.571871 | 7.1:+3047377 | MS.gene050885:CDS |
| CTGAGATTGTACATGATGAA+GGG | 0.573048 | 7.1:+3045571 | MS.gene050885:CDS |
| CCAACACGTCTCTTTGGAGT+AGG | 0.575104 | 7.1:-3046718 | None:intergenic |
| TGCTTGTCTTAATTTCGGGA+AGG | 0.576196 | 7.1:+3045629 | MS.gene050885:CDS |
| TGAAGATGATGACTTAAATG+AGG | 0.578584 | 7.1:+3048158 | MS.gene050885:CDS |
| CTCAGGGAAGTAACCGTGGT+CGG | 0.578926 | 7.1:+3048583 | MS.gene050885:CDS |
| CCCCAATGTGGACAGAAAAG+TGG | 0.583170 | 7.1:+3045949 | MS.gene050885:CDS |
| TCTGGTCGGCAGCAGAAACA+TGG | 0.585007 | 7.1:-3048053 | None:intergenic |
| AAATTTGATGACAGGGAGCA+CGG | 0.585765 | 7.1:+3048690 | MS.gene050885:CDS |
| AGGACCGGTTTGATTTGTTG+AGG | 0.591868 | 7.1:+3045649 | MS.gene050885:CDS |
| AGGTGGAATTTGTGCATCCG+TGG | 0.592128 | 7.1:+3045445 | MS.gene050885:CDS |
| AAAGATGGAAAGTCTGGTGG+TGG | 0.592319 | 7.1:+3048240 | MS.gene050885:CDS |
| TCTGCCTTTCCTTCTCTGGT+CGG | 0.592904 | 7.1:-3048067 | None:intergenic |
| AACAGAAGACTCTTTGGACT+GGG | 0.595101 | 7.1:+3047852 | MS.gene050885:CDS |
| TAAGATGGGCAGTCGGCAAG+AGG | 0.595204 | 7.1:+3047498 | MS.gene050885:CDS |
| CTCGAGGAAATGACCGGAGT+AGG | 0.595253 | 7.1:+3048664 | MS.gene050885:CDS |
| ACACGTCTCTTTGGAGTAGG+AGG | 0.598857 | 7.1:-3046715 | None:intergenic |
| CCTACTCCAAAGAGACGTGT+TGG | 0.599442 | 7.1:+3046718 | MS.gene050885:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7.1:+3048399 | MS.gene050885:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7.1:+3048483 | MS.gene050885:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7.1:+3048567 | MS.gene050885:CDS |
| CTTGAATTACAGAAGGAATG+TGG | 0.602047 | 7.1:+3047384 | MS.gene050885:CDS |
| ATAACAATGCTCGGCGTGTG+GGG | 0.604808 | 7.1:+3047629 | MS.gene050885:CDS |
| TAAAATTAACAGCCAACCTG+TGG | 0.604873 | 7.1:+3045407 | MS.gene050885:CDS |
| GCTGCCGACCAGAGAAGGAA+AGG | 0.607141 | 7.1:+3048063 | MS.gene050885:CDS |
| GAAGTAACCGTGATAAGAAG+AGG | 0.607183 | 7.1:+3048340 | MS.gene050885:CDS |
| AGAAATGCTAGAGGGTCTCA+GGG | 0.608421 | 7.1:+3048318 | MS.gene050885:CDS |
| ACAGACATGATTCTGGGAGA+AGG | 0.609668 | 7.1:+3048208 | MS.gene050885:CDS |
| CATCAAATCTCTTCCGACCA+CGG | 0.613295 | 7.1:-3048596 | None:intergenic |
| TTGATTTCAGGTCGTTGTCG+AGG | 0.613354 | 7.1:+3045894 | MS.gene050885:intron |
| AATCTTATGGGAATGATAGA+GGG | 0.615135 | 7.1:+3048640 | MS.gene050885:CDS |
| TTTCCAGGAATTCATCAGGT+GGG | 0.615174 | 7.1:-3047432 | None:intergenic |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7.1:+3048391 | MS.gene050885:CDS |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7.1:+3048475 | MS.gene050885:CDS |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7.1:+3048559 | MS.gene050885:CDS |
| CATTAACATATTCGTCATCG+TGG | 0.624458 | 7.1:-3047693 | None:intergenic |
| GATGATGTTGAGATGAAAAG+GGG | 0.632277 | 7.1:+3046745 | MS.gene050885:CDS |
| ACTAAAGATGGAAAGTCTGG+TGG | 0.633614 | 7.1:+3048237 | MS.gene050885:CDS |
| ACTTTAATAAGATGGGCAGT+CGG | 0.636668 | 7.1:+3047491 | MS.gene050885:CDS |
| GCAGAAGTCTGTTAAAGCAG+TGG | 0.639008 | 7.1:+3046588 | MS.gene050885:CDS |
| AGTTGAGAAATGGAAGAATG+GGG | 0.640454 | 7.1:-3045145 | None:intergenic |
| TAGGCAGAAATTTGATGACA+GGG | 0.644055 | 7.1:+3048683 | MS.gene050885:CDS |
| ATTAACATATTCGTCATCGT+GGG | 0.644202 | 7.1:-3047692 | None:intergenic |
| CAAACAAAGAGGACGAGGCA+CGG | 0.646878 | 7.1:+3046482 | MS.gene050885:CDS |
| TGTGGAATTGGTGAAGAAAG+AGG | 0.646891 | 7.1:+3045425 | MS.gene050885:CDS |
| GTTCTAGGTCTAGAAGGACC+GGG | 0.647939 | 7.1:-3047721 | None:intergenic |
| TTATCTGCTTACAAACAAAG+AGG | 0.648918 | 7.1:+3046471 | MS.gene050885:CDS |
| CAGTCTTATAGAAATGCTAG+AGG | 0.651109 | 7.1:+3048309 | MS.gene050885:CDS |
| TTTGATGACAATGAATCAGA+TGG | 0.653290 | 7.1:+3047544 | MS.gene050885:CDS |
| GGGAATGATAGAGGGTCTCG+AGG | 0.653470 | 7.1:+3048648 | MS.gene050885:CDS |
| TGATGTTGAGATGAAAAGGG+GGG | 0.656571 | 7.1:+3046747 | MS.gene050885:CDS |
| GATGACGAATATGTTAATGC+CGG | 0.658800 | 7.1:+3047697 | MS.gene050885:CDS |
| GCTTACAAACAAAGAGGACG+AGG | 0.663787 | 7.1:+3046477 | MS.gene050885:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7.1:+3048390 | MS.gene050885:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7.1:+3048474 | MS.gene050885:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7.1:+3048558 | MS.gene050885:CDS |
| CGAAGAATAGGAGCGTCCCA+GGG | 0.664768 | 7.1:+3047668 | MS.gene050885:CDS |
| GTCCTTCTAGACCTAGAACA+GGG | 0.666093 | 7.1:+3047725 | MS.gene050885:CDS |
| TACAGTATGGATGAGAAGGG+TGG | 0.669176 | 7.1:+3048732 | MS.gene050885:CDS |
| ATGATGTTGAGATGAAAAGG+GGG | 0.672376 | 7.1:+3046746 | MS.gene050885:CDS |
| AGATTCTCATGGTATAGACA+AGG | 0.676876 | 7.1:+3047594 | MS.gene050885:CDS |
| ATTATGATTCTGATGAACAG+CGG | 0.679445 | 7.1:+3048004 | MS.gene050885:CDS |
| AGTCTTATAGAAATGCTAGA+GGG | 0.683962 | 7.1:+3048310 | MS.gene050885:CDS |
| TTACATCTCCTTCATCCAGG+TGG | 0.684945 | 7.1:-3046003 | None:intergenic |
| GCATTTCTATAAGACTGCCG+GGG | 0.703378 | 7.1:-3048303 | None:intergenic |
| GGGTCTCAGGGAAGTAACCG+TGG | 0.707185 | 7.1:+3048579 | MS.gene050885:CDS |
| GGAATTGGTGAAGAAAGAGG+TGG | 0.708417 | 7.1:+3045428 | MS.gene050885:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGTTTAATAAATACAGTA+TGG | + | chr7.1:3048719-3048738 | MS.gene050885:CDS | 20.0% |
| !! | ATAATGAGAAAAATATGCTT+CGG | - | chr7.1:3046372-3046391 | None:intergenic | 20.0% |
| !! | TACAAAAATTCATTGATATC+AGG | + | chr7.1:3046408-3046427 | MS.gene050885:intron | 20.0% |
| !! | TAGCAAAATCTAACAATATT+TGG | - | chr7.1:3047315-3047334 | None:intergenic | 20.0% |
| !!! | AATTTGGTTATGAGTATTTT+TGG | - | chr7.1:3045304-3045323 | None:intergenic | 20.0% |
| !!! | ATCAGAATTATTTTGATCAT+AGG | + | chr7.1:3045502-3045521 | MS.gene050885:CDS | 20.0% |
| !!! | TAACTAAGTTGAATTCATTT+TGG | + | chr7.1:3045687-3045706 | MS.gene050885:intron | 20.0% |
| !!! | TAGTTTATTTTTCCTCTTAA+CGG | + | chr7.1:3047085-3047104 | MS.gene050885:intron | 20.0% |
| !!! | TATTGTTCTGTTTTACATAT+GGG | + | chr7.1:3045807-3045826 | MS.gene050885:intron | 20.0% |
| !!! | TGAGTTGTTTATTTTTTATC+TGG | + | chr7.1:3047349-3047368 | MS.gene050885:intron | 20.0% |
| !!! | TTATTGTTCTGTTTTACATA+TGG | + | chr7.1:3045806-3045825 | MS.gene050885:intron | 20.0% |
| ! | AATAAAAGTAAAACAGCTTC+TGG | + | chr7.1:3047913-3047932 | MS.gene050885:CDS | 25.0% |
| ! | ACAATTCACAAGTAATGAAT+AGG | + | chr7.1:3046132-3046151 | MS.gene050885:intron | 25.0% |
| ! | AGAATCTGCATATTCAAAAT+TGG | - | chr7.1:3047581-3047600 | None:intergenic | 25.0% |
| ! | AGAGTAACATAATGATATTG+TGG | + | chr7.1:3045780-3045799 | MS.gene050885:intron | 25.0% |
| ! | GTATATCATTAACTACCAAA+AGG | - | chr7.1:3047010-3047029 | None:intergenic | 25.0% |
| ! | GTGTAGCAAACATAATAAAT+TGG | - | chr7.1:3046904-3046923 | None:intergenic | 25.0% |
| ! | TAATGAGAAAAATATGCTTC+GGG | - | chr7.1:3046371-3046390 | None:intergenic | 25.0% |
| ! | TATACTATTAGACGTCAAAT+TGG | + | chr7.1:3047025-3047044 | MS.gene050885:intron | 25.0% |
| ! | TCATTACTTGTGAATTGTAA+TGG | - | chr7.1:3046130-3046149 | None:intergenic | 25.0% |
| ! | TTAAGTCCATTTAATGTTCT+GGG | + | chr7.1:3047234-3047253 | MS.gene050885:intron | 25.0% |
| ! | TTTAAGTCCATTTAATGTTC+TGG | + | chr7.1:3047233-3047252 | MS.gene050885:intron | 25.0% |
| !! | ATGAATGATTGATTGATTTC+AGG | + | chr7.1:3045882-3045901 | MS.gene050885:intron | 25.0% |
| !! | ATTGTTCTGTTTTACATATG+GGG | + | chr7.1:3045808-3045827 | MS.gene050885:intron | 25.0% |
| !! | TAAATGGACTTAAACTTACT+CGG | - | chr7.1:3047227-3047246 | None:intergenic | 25.0% |
| !!! | AAGAGATTTGATGATTTTGA+TGG | + | chr7.1:3048606-3048625 | MS.gene050885:CDS | 25.0% |
| !!! | AAGTTGATTCATTGTTGTTT+TGG | + | chr7.1:3046077-3046096 | MS.gene050885:intron | 25.0% |
| !!! | AGAATTATTTTGATCATAGG+AGG | + | chr7.1:3045505-3045524 | MS.gene050885:CDS | 25.0% |
| !!! | ATTTTGGTTGTTGAATTTGT+TGG | + | chr7.1:3045703-3045722 | MS.gene050885:intron | 25.0% |
| !!! | ATTTTTTCTGTTTCTCCTTT+TGG | + | chr7.1:3046992-3047011 | MS.gene050885:intron | 25.0% |
| !!! | GACATGATTTGTTTTTATCT+GGG | - | chr7.1:3047290-3047309 | None:intergenic | 25.0% |
| !!! | TATCTTGAGTTTTATTTTCC+AGG | - | chr7.1:3047450-3047469 | None:intergenic | 25.0% |
| !!! | TGACATGATTTGTTTTTATC+TGG | - | chr7.1:3047291-3047310 | None:intergenic | 25.0% |
| !!! | TTGTTTATTTTTTATCTGGC+AGG | + | chr7.1:3047353-3047372 | MS.gene050885:intron | 25.0% |
| !!! | TTTTCTCTGGAAAACTTTTA+AGG | + | chr7.1:3045972-3045991 | MS.gene050885:CDS | 25.0% |
| !!! | TTTTGGTTGTTGAATTTGTT+GGG | + | chr7.1:3045704-3045723 | MS.gene050885:intron | 25.0% |
| AAATACAGTATGGATGAGAA+GGG | + | chr7.1:3048729-3048748 | MS.gene050885:CDS | 30.0% | |
| AAATCTTATGGGAATGATAG+AGG | + | chr7.1:3048639-3048658 | MS.gene050885:CDS | 30.0% | |
| AAGTTGAGAAATGGAAGAAT+GGG | - | chr7.1:3045149-3045168 | None:intergenic | 30.0% | |
| AATAAGAAAGATCGCAAAAG+AGG | - | chr7.1:3046332-3046351 | None:intergenic | 30.0% | |
| AATCTTATGGGAATGATAGA+GGG | + | chr7.1:3048640-3048659 | MS.gene050885:CDS | 30.0% | |
| AGAACAATCAAATCAATCTC+AGG | - | chr7.1:3046253-3046272 | None:intergenic | 30.0% | |
| AGAACCAAAGCTTAATTTCT+TGG | - | chr7.1:3048100-3048119 | None:intergenic | 30.0% | |
| AGAAGGAACTTTACTAAAGA+TGG | + | chr7.1:3048225-3048244 | MS.gene050885:CDS | 30.0% | |
| ATAAAATGGTGCAGGATTTA+GGG | + | chr7.1:3045538-3045557 | MS.gene050885:CDS | 30.0% | |
| ATAAGAAAGATCGCAAAAGA+GGG | - | chr7.1:3046331-3046350 | None:intergenic | 30.0% | |
| ATAATCAAGTTCATCTTCCT+TGG | - | chr7.1:3047989-3048008 | None:intergenic | 30.0% | |
| ATTAACATATTCGTCATCGT+GGG | - | chr7.1:3047695-3047714 | None:intergenic | 30.0% | |
| ATTATGATTCTGATGAACAG+CGG | + | chr7.1:3048004-3048023 | MS.gene050885:CDS | 30.0% | |
| ATTCATCCAGGCAAAATAAA+GGG | + | chr7.1:3048184-3048203 | MS.gene050885:CDS | 30.0% | |
| GGACCTAACTTTAATAAGAT+GGG | + | chr7.1:3047484-3047503 | MS.gene050885:CDS | 30.0% | |
| TAAATACAGTATGGATGAGA+AGG | + | chr7.1:3048728-3048747 | MS.gene050885:CDS | 30.0% | |
| TAAGTCCATTTAATGTTCTG+GGG | + | chr7.1:3047235-3047254 | MS.gene050885:intron | 30.0% | |
| TATTCATCCAGGCAAAATAA+AGG | + | chr7.1:3048183-3048202 | MS.gene050885:CDS | 30.0% | |
| TGAAGATGATGACTTAAATG+AGG | + | chr7.1:3048158-3048177 | MS.gene050885:CDS | 30.0% | |
| TGGACCTAACTTTAATAAGA+TGG | + | chr7.1:3047483-3047502 | MS.gene050885:CDS | 30.0% | |
| TGTCATTACCATAAGATTTC+CGG | - | chr7.1:3048389-3048408 | None:intergenic | 30.0% | |
| TTATCTGCTTACAAACAAAG+AGG | + | chr7.1:3046471-3046490 | MS.gene050885:CDS | 30.0% | |
| TTTACTAAAGATGGAAAGTC+TGG | + | chr7.1:3048234-3048253 | MS.gene050885:CDS | 30.0% | |
| TTTCTTCAGATAACAATGCT+CGG | + | chr7.1:3047620-3047639 | MS.gene050885:CDS | 30.0% | |
| TTTGAATATGCAGATTCTCA+TGG | + | chr7.1:3047583-3047602 | MS.gene050885:CDS | 30.0% | |
| ! | AAATCTTATGGTAATGACAG+AGG | + | chr7.1:3048390-3048409 | MS.gene050885:CDS | 30.0% |
| ! | AAGATGATTTTGCGAAGAAT+AGG | + | chr7.1:3047656-3047675 | MS.gene050885:CDS | 30.0% |
| ! | AATCTTATGGTAATGACAGA+GGG | + | chr7.1:3048391-3048410 | MS.gene050885:CDS | 30.0% |
| ! | AGTCTTATAGAAATGCTAGA+GGG | + | chr7.1:3048310-3048329 | MS.gene050885:CDS | 30.0% |
| ! | CAAGATAAAAAGTACAGTTC+TGG | + | chr7.1:3047463-3047482 | MS.gene050885:CDS | 30.0% |
| ! | CTTTTGCGATCTTTCTTATT+TGG | + | chr7.1:3046332-3046351 | MS.gene050885:intron | 30.0% |
| ! | GAAGATGCTAAATACTTTTC+AGG | + | chr7.1:3047107-3047126 | MS.gene050885:intron | 30.0% |
| ! | TTATTTTCCAGGAATTCATC+AGG | - | chr7.1:3047439-3047458 | None:intergenic | 30.0% |
| ! | TTGAAGAGTTTCGTGTTTTT+GGG | - | chr7.1:3045259-3045278 | None:intergenic | 30.0% |
| ! | TTGTTCTGTTTTACATATGG+GGG | + | chr7.1:3045809-3045828 | MS.gene050885:intron | 30.0% |
| ! | TTTGATGACAATGAATCAGA+TGG | + | chr7.1:3047544-3047563 | MS.gene050885:CDS | 30.0% |
| !! | AAGAGGTTTGATGATTTTGA+TGG | + | chr7.1:3048357-3048376 | MS.gene050885:CDS | 30.0% |
| !! | AGGAATTTTGTTTGAGATGA+TGG | + | chr7.1:3046152-3046171 | MS.gene050885:intron | 30.0% |
| !! | CAAGTGTCTATATTTGTTGT+CGG | + | chr7.1:3046217-3046236 | MS.gene050885:intron | 30.0% |
| !! | TGAAGGGTTTGATTTTACTA+AGG | + | chr7.1:3045587-3045606 | MS.gene050885:CDS | 30.0% |
| !! | TGAGATTGATTTGATTGTTC+TGG | + | chr7.1:3046252-3046271 | MS.gene050885:intron | 30.0% |
| !!! | ATGATTTGTTTTTATCTGGG+AGG | - | chr7.1:3047287-3047306 | None:intergenic | 30.0% |
| !!! | ATTCAAGTTTTGGTTGGTTT+TGG | + | chr7.1:3045923-3045942 | MS.gene050885:CDS | 30.0% |
| !!! | TGATTTGTTTTTATCTGGGA+GGG | - | chr7.1:3047286-3047305 | None:intergenic | 30.0% |
| !!! | TTATTTTGATCATAGGAGGA+AGG | + | chr7.1:3045509-3045528 | MS.gene050885:CDS | 30.0% |
| AAAGTCAAAATTCCAGGCAT+TGG | - | chr7.1:3047527-3047546 | None:intergenic | 35.0% | |
| AAATCATCAAACCCTGTTCT+AGG | - | chr7.1:3047739-3047758 | None:intergenic | 35.0% | |
| ACTTTAATAAGATGGGCAGT+CGG | + | chr7.1:3047491-3047510 | MS.gene050885:CDS | 35.0% | |
| AGATTCTCATGGTATAGACA+AGG | + | chr7.1:3047594-3047613 | MS.gene050885:CDS | 35.0% | |
| AGGACTGATGATCCATTAAT+AGG | - | chr7.1:3046550-3046569 | None:intergenic | 35.0% | |
| AGTAAATCACAGAGATTCCA+AGG | - | chr7.1:3046795-3046814 | None:intergenic | 35.0% | |
| AGTTGAGAAATGGAAGAATG+GGG | - | chr7.1:3045148-3045167 | None:intergenic | 35.0% | |
| ATGATGTTGAGATGAAAAGG+GGG | + | chr7.1:3046746-3046765 | MS.gene050885:CDS | 35.0% | |
| ATGTATTCTTGCGAACTGAA+CGG | - | chr7.1:3047954-3047973 | None:intergenic | 35.0% | |
| ATTTAGCATCTTCCGTTAAG+AGG | - | chr7.1:3047100-3047119 | None:intergenic | 35.0% | |
| CATACCTCAACAAATCAAAC+CGG | - | chr7.1:3045656-3045675 | None:intergenic | 35.0% | |
| CATCAAACCTCTTCTTATCA+CGG | - | chr7.1:3048350-3048369 | None:intergenic | 35.0% | |
| CATTAACATATTCGTCATCG+TGG | - | chr7.1:3047696-3047715 | None:intergenic | 35.0% | |
| CCAAAGCTTAATTTCTTGGT+TGG | - | chr7.1:3048096-3048115 | None:intergenic | 35.0% | |
| CCAACCAAGAAATTAAGCTT+TGG | + | chr7.1:3048093-3048112 | MS.gene050885:CDS | 35.0% | |
| CTGAGATTGTACATGATGAA+GGG | + | chr7.1:3045571-3045590 | MS.gene050885:CDS | 35.0% | |
| CTGCCCATCTTATTAAAGTT+AGG | - | chr7.1:3047490-3047509 | None:intergenic | 35.0% | |
| CTTGAATTACAGAAGGAATG+TGG | + | chr7.1:3047384-3047403 | MS.gene050885:CDS | 35.0% | |
| CTTGGGTTTGATCCTATTAA+TGG | + | chr7.1:3046535-3046554 | MS.gene050885:CDS | 35.0% | |
| GAAGTTGAGAAATGGAAGAA+TGG | - | chr7.1:3045150-3045169 | None:intergenic | 35.0% | |
| GAGGAAGGATGAAGATAAAA+TGG | + | chr7.1:3045524-3045543 | MS.gene050885:CDS | 35.0% | |
| GATAAAATGGTGCAGGATTT+AGG | + | chr7.1:3045537-3045556 | MS.gene050885:CDS | 35.0% | |
| GATGACGAATATGTTAATGC+CGG | + | chr7.1:3047697-3047716 | MS.gene050885:CDS | 35.0% | |
| GATGATGTTGAGATGAAAAG+GGG | + | chr7.1:3046745-3046764 | MS.gene050885:CDS | 35.0% | |
| GATTCAATTGATGGAGAGAT+TGG | + | chr7.1:3045476-3045495 | MS.gene050885:CDS | 35.0% | |
| GCAACTTCTTGAATTACAGA+AGG | + | chr7.1:3047377-3047396 | MS.gene050885:CDS | 35.0% | |
| GGATGATGTTGAGATGAAAA+GGG | + | chr7.1:3046744-3046763 | MS.gene050885:CDS | 35.0% | |
| GGCTACAAATCAAACATGTT+CGG | + | chr7.1:3048261-3048280 | MS.gene050885:CDS | 35.0% | |
| GTCATCAAAGTCAAAATTCC+AGG | - | chr7.1:3047533-3047552 | None:intergenic | 35.0% | |
| GTCATTACCATAAGATTTCC+GGG | - | chr7.1:3048388-3048407 | None:intergenic | 35.0% | |
| TAAAATTAACAGCCAACCTG+TGG | + | chr7.1:3045407-3045426 | MS.gene050885:CDS | 35.0% | |
| TAAATGAGGCATATTCATCC+AGG | + | chr7.1:3048172-3048191 | MS.gene050885:CDS | 35.0% | |
| TAAGAAAGATCGCAAAAGAG+GGG | - | chr7.1:3046330-3046349 | None:intergenic | 35.0% | |
| TAGCATTTCTATAAGACTGC+CGG | - | chr7.1:3048308-3048327 | None:intergenic | 35.0% | |
| TATGAGCTAGAAACTGAAAC+AGG | + | chr7.1:3047784-3047803 | MS.gene050885:CDS | 35.0% | |
| TCAACCAAAAAAAGTTCACC+TGG | - | chr7.1:3046935-3046954 | None:intergenic | 35.0% | |
| TCCATCAATTGAATCCATTC+CGG | - | chr7.1:3045471-3045490 | None:intergenic | 35.0% | |
| TGTAACCCCAGAACATTAAA+TGG | - | chr7.1:3047243-3047262 | None:intergenic | 35.0% | |
| TTCAGAAACAGAAGACTCTT+TGG | + | chr7.1:3047846-3047865 | MS.gene050885:CDS | 35.0% | |
| ! | AAATGGAAGAATGGGGTTTT+AGG | - | chr7.1:3045141-3045160 | None:intergenic | 35.0% |
| ! | AATGGAAGAATGGGGTTTTA+GGG | - | chr7.1:3045140-3045159 | None:intergenic | 35.0% |
| ! | ATGCTGCTTGTCTTAATTTC+GGG | + | chr7.1:3045625-3045644 | MS.gene050885:CDS | 35.0% |
| ! | ATTATGTTTGCTACACCATG+TGG | + | chr7.1:3046908-3046927 | MS.gene050885:intron | 35.0% |
| ! | CAGTCTTATAGAAATGCTAG+AGG | + | chr7.1:3048309-3048328 | MS.gene050885:CDS | 35.0% |
| ! | CATGCTGCTTGTCTTAATTT+CGG | + | chr7.1:3045624-3045643 | MS.gene050885:CDS | 35.0% |
| ! | GTTGAAGAGTTTCGTGTTTT+TGG | - | chr7.1:3045260-3045279 | None:intergenic | 35.0% |
| ! | TAGGCAGAAATTTGATGACA+GGG | + | chr7.1:3048683-3048702 | MS.gene050885:CDS | 35.0% |
| ! | TCTGAGATTGTACATGATGA+AGG | + | chr7.1:3045570-3045589 | MS.gene050885:CDS | 35.0% |
| !! | AACAGGGTTTGATGATTTTG+AGG | + | chr7.1:3047741-3047760 | MS.gene050885:CDS | 35.0% |
| !! | AAGCGGTTTGATGATTTTGA+TGG | + | chr7.1:3048438-3048457 | MS.gene050885:CDS | 35.0% |
| !! | ATGATTTTGATGAATCACCC+CGG | + | chr7.1:3048286-3048305 | MS.gene050885:CDS | 35.0% |
| !! | ATGATTTTGATGGATCATCC+CGG | + | chr7.1:3048367-3048386 | MS.gene050885:CDS | 35.0% |
| !! | ATGATTTTGATGGATCGTCT+CGG | + | chr7.1:3048616-3048635 | MS.gene050885:CDS | 35.0% |
| !! | ATTTTGATGGATCATCATCC+CGG | + | chr7.1:3048451-3048470 | MS.gene050885:CDS | 35.0% |
| !! | CAGGATATTCAAGTTTTGGT+TGG | + | chr7.1:3045917-3045936 | MS.gene050885:CDS | 35.0% |
| !! | CGATCTTTCTTATTTGGTGT+TGG | + | chr7.1:3046338-3046357 | MS.gene050885:intron | 35.0% |
| !! | GCAGTGATTTTAGAAACAGT+AGG | + | chr7.1:3048754-3048773 | MS.gene050885:CDS | 35.0% |
| !! | GTTTGATGATTTTGAGGAAG+AGG | + | chr7.1:3047747-3047766 | MS.gene050885:CDS | 35.0% |
| !! | GTTTGATTTGTTGAGGTATG+TGG | + | chr7.1:3045656-3045675 | MS.gene050885:intron | 35.0% |
| !! | TGATTCTGAAACAGGTTGTT+CGG | - | chr7.1:3045328-3045347 | None:intergenic | 35.0% |
| !!! | GATTTGTTTTTATCTGGGAG+GGG | - | chr7.1:3047285-3047304 | None:intergenic | 35.0% |
| !!! | TAATTGTTTTGAGCACCGAA+TGG | - | chr7.1:3046043-3046062 | None:intergenic | 35.0% |
| AAACAGAAGACTCTTTGGAC+TGG | + | chr7.1:3047851-3047870 | MS.gene050885:CDS | 40.0% | |
| AAACAGGTTGTTCGGGAATT+TGG | - | chr7.1:3045320-3045339 | None:intergenic | 40.0% | |
| AAAGGGAACAGACATGATTC+TGG | + | chr7.1:3048201-3048220 | MS.gene050885:CDS | 40.0% | |
| AACAGAAGACTCTTTGGACT+GGG | + | chr7.1:3047852-3047871 | MS.gene050885:CDS | 40.0% | |
| AAGGGAACAGACATGATTCT+GGG | + | chr7.1:3048202-3048221 | MS.gene050885:CDS | 40.0% | |
| ACAGACTTCTGCTTCAAAAG+TGG | - | chr7.1:3046580-3046599 | None:intergenic | 40.0% | |
| ACTAAAGATGGAAAGTCTGG+TGG | + | chr7.1:3048237-3048256 | MS.gene050885:CDS | 40.0% | |
| AGCATTTCTATAAGACTGCC+GGG | - | chr7.1:3048307-3048326 | None:intergenic | 40.0% | |
| AGCTTCCATTCTTGAACTAC+TGG | - | chr7.1:3047812-3047831 | None:intergenic | 40.0% | |
| AGGAACCAGTAGTTCAAGAA+TGG | + | chr7.1:3047804-3047823 | MS.gene050885:CDS | 40.0% | |
| CAGAGAGAGAAGAAGGTTTA+GGG | - | chr7.1:3045185-3045204 | None:intergenic | 40.0% | |
| CATCAAATTTCTGCCTACTC+CGG | - | chr7.1:3048680-3048699 | None:intergenic | 40.0% | |
| CTAGAACTTGACATGCACTT+TGG | - | chr7.1:3046850-3046869 | None:intergenic | 40.0% | |
| CTATGTCCAAAGTATGTCCT+TGG | + | chr7.1:3046775-3046794 | MS.gene050885:intron | 40.0% | |
| GAAGTAACCGTGATAAGAAG+AGG | + | chr7.1:3048340-3048359 | MS.gene050885:CDS | 40.0% | |
| GAATTAACGATGCCTATCAG+TGG | - | chr7.1:3046962-3046981 | None:intergenic | 40.0% | |
| GAGACAAGATTCAAATCCTC+CGG | - | chr7.1:3046181-3046200 | None:intergenic | 40.0% | |
| GAGATTCCAAGGACATACTT+TGG | - | chr7.1:3046784-3046803 | None:intergenic | 40.0% | |
| GATCGTCTCGGAAATCTTAT+GGG | + | chr7.1:3048628-3048647 | MS.gene050885:CDS | 40.0% | |
| GGATGAAGATAAAATGGTGC+AGG | + | chr7.1:3045530-3045549 | MS.gene050885:CDS | 40.0% | |
| GGGATGATGTTGAGATGAAA+AGG | + | chr7.1:3046743-3046762 | MS.gene050885:CDS | 40.0% | |
| TACATCTTTCTCTCGATCCA+AGG | + | chr7.1:3047969-3047988 | MS.gene050885:CDS | 40.0% | |
| TCATCATCCCGGAAATCTTA+TGG | + | chr7.1:3048462-3048481 | MS.gene050885:CDS | 40.0% | |
| TCTTTCTTCACCAATTCCAC+AGG | - | chr7.1:3045426-3045445 | None:intergenic | 40.0% | |
| TGATGTTGAGATGAAAAGGG+GGG | + | chr7.1:3046747-3046766 | MS.gene050885:CDS | 40.0% | |
| TGCTTGTCTTAATTTCGGGA+AGG | + | chr7.1:3045629-3045648 | MS.gene050885:CDS | 40.0% | |
| TGTATTCTTGCGAACTGAAC+GGG | - | chr7.1:3047953-3047972 | None:intergenic | 40.0% | |
| TGTGGAATTGGTGAAGAAAG+AGG | + | chr7.1:3045425-3045444 | MS.gene050885:CDS | 40.0% | |
| TTGGTTGACAAACCACTGAT+AGG | + | chr7.1:3046947-3046966 | MS.gene050885:intron | 40.0% | |
| TTTCCAGGAATTCATCAGGT+GGG | - | chr7.1:3047435-3047454 | None:intergenic | 40.0% | |
| ! | AAATTTGATGACAGGGAGCA+CGG | + | chr7.1:3048690-3048709 | MS.gene050885:CDS | 40.0% |
| ! | ACAATTGTTTCTCAAGCTGC+AGG | - | chr7.1:3046443-3046462 | None:intergenic | 40.0% |
| ! | AGAGAAGAAGGTTTAGGGTT+TGG | - | chr7.1:3045180-3045199 | None:intergenic | 40.0% |
| ! | GACAGAAAAGTGGTTTTCTC+TGG | + | chr7.1:3045959-3045978 | MS.gene050885:CDS | 40.0% |
| ! | GACGAAGATGTTGTTGTTGT+TGG | - | chr7.1:3045366-3045385 | None:intergenic | 40.0% |
| ! | GAGAAGAAGGTTTAGGGTTT+GGG | - | chr7.1:3045179-3045198 | None:intergenic | 40.0% |
| ! | GATGTTGTTGTTGTTGGTGA+TGG | - | chr7.1:3045360-3045379 | None:intergenic | 40.0% |
| ! | GTAGGCAGAAATTTGATGAC+AGG | + | chr7.1:3048682-3048701 | MS.gene050885:CDS | 40.0% |
| ! | TTTTCCAGGAATTCATCAGG+TGG | - | chr7.1:3047436-3047455 | None:intergenic | 40.0% |
| !! | AACCACTTTTCTGTCCACAT+TGG | - | chr7.1:3045954-3045973 | None:intergenic | 40.0% |
| !! | AAGGTTTAGGGTTTGGGTTT+TGG | - | chr7.1:3045173-3045192 | None:intergenic | 40.0% |
| !! | ACCACTTTTCTGTCCACATT+GGG | - | chr7.1:3045953-3045972 | None:intergenic | 40.0% |
| !! | AGGTTTAGGGTTTGGGTTTT+GGG | - | chr7.1:3045172-3045191 | None:intergenic | 40.0% |
| !! | ATATTTGTTGTCGGTGGCAA+AGG | + | chr7.1:3046226-3046245 | MS.gene050885:intron | 40.0% |
| !! | ATTTTGATGGATCGTCATCC+CGG | + | chr7.1:3048535-3048554 | MS.gene050885:CDS | 40.0% |
| !! | GAGGCAGGATATTCAAGTTT+TGG | + | chr7.1:3045913-3045932 | MS.gene050885:CDS | 40.0% |
| !! | GATTCTGAAACAGGTTGTTC+GGG | - | chr7.1:3045327-3045346 | None:intergenic | 40.0% |
| !! | GTGTCTATATTTGTTGTCGG+TGG | + | chr7.1:3046220-3046239 | MS.gene050885:intron | 40.0% |
| !! | TTGTTTGAGATGATGGAAGC+CGG | + | chr7.1:3046159-3046178 | MS.gene050885:intron | 40.0% |
| !!! | GGTTTTGGGAAGTTGAGAAA+TGG | - | chr7.1:3045158-3045177 | None:intergenic | 40.0% |
| !!! | TCTGTTCCCTTTATTTTGCC+TGG | - | chr7.1:3048193-3048212 | None:intergenic | 40.0% |
| !!! | TGGACCAGGTGAACTTTTTT+TGG | + | chr7.1:3046928-3046947 | MS.gene050885:intron | 40.0% |
| AAAAGTTCACCTGGTCCACA+TGG | - | chr7.1:3046926-3046945 | None:intergenic | 45.0% | |
| AAAGATGGAAAGTCTGGTGG+TGG | + | chr7.1:3048240-3048259 | MS.gene050885:CDS | 45.0% | |
| AATTGAATCCATTCCGGCCA+CGG | - | chr7.1:3045465-3045484 | None:intergenic | 45.0% | |
| ACAGTTGCTTCCAGGAGAAT+GGG | + | chr7.1:3047195-3047214 | MS.gene050885:CDS | 45.0% | |
| AGAAATGCTAGAGGGTCTCA+GGG | + | chr7.1:3048318-3048337 | MS.gene050885:CDS | 45.0% | |
| AGTGTAACACGCATGCCATT+CGG | + | chr7.1:3046025-3046044 | MS.gene050885:intron | 45.0% | |
| ATGCGAATGCTACTGACACT+TGG | + | chr7.1:3046517-3046536 | MS.gene050885:CDS | 45.0% | |
| CACTTACATCTCCTTCATCC+AGG | - | chr7.1:3046009-3046028 | None:intergenic | 45.0% | |
| CATCAAATCTCTTCCGACCA+CGG | - | chr7.1:3048599-3048618 | None:intergenic | 45.0% | |
| CTCTTCAACGAATTCGTGCT+TGG | + | chr7.1:3045271-3045290 | MS.gene050885:CDS | 45.0% | |
| GAACTTGACATGCACTTTGG+TGG | - | chr7.1:3046847-3046866 | None:intergenic | 45.0% | |
| GAATATGTTAATGCCGGTCC+CGG | + | chr7.1:3047703-3047722 | MS.gene050885:CDS | 45.0% | |
| GACAGATGCGAGTGAGATAA+TGG | - | chr7.1:3046289-3046308 | None:intergenic | 45.0% | |
| GATCAAAAAGCCTCCACCAA+AGG | + | chr7.1:3046681-3046700 | MS.gene050885:CDS | 45.0% | |
| GCAGAAGTCTGTTAAAGCAG+TGG | + | chr7.1:3046588-3046607 | MS.gene050885:CDS | 45.0% | |
| GCAGAGAGAGAAGAAGGTTT+AGG | - | chr7.1:3045186-3045205 | None:intergenic | 45.0% | |
| GCATTTCTATAAGACTGCCG+GGG | - | chr7.1:3048306-3048325 | None:intergenic | 45.0% | |
| GCTTACAAACAAAGAGGACG+AGG | + | chr7.1:3046477-3046496 | MS.gene050885:CDS | 45.0% | |
| GGAATTGGTGAAGAAAGAGG+TGG | + | chr7.1:3045428-3045447 | MS.gene050885:CDS | 45.0% | |
| GGAGGGAGATTTGGATCAAT+AGG | - | chr7.1:3046655-3046674 | None:intergenic | 45.0% | |
| GGATCATCCCGGAAATCTTA+TGG | + | chr7.1:3048378-3048397 | MS.gene050885:CDS | 45.0% | |
| GGATCGTCTCGGAAATCTTA+TGG | + | chr7.1:3048627-3048646 | MS.gene050885:CDS | 45.0% | |
| GTCCTTCTAGACCTAGAACA+GGG | + | chr7.1:3047725-3047744 | MS.gene050885:CDS | 45.0% | |
| GTCTTAATTTCGGGAAGGAC+CGG | + | chr7.1:3045634-3045653 | MS.gene050885:CDS | 45.0% | |
| TAACAGCCAACCTGTGGAAT+TGG | + | chr7.1:3045413-3045432 | MS.gene050885:CDS | 45.0% | |
| TACAGTATGGATGAGAAGGG+TGG | + | chr7.1:3048732-3048751 | MS.gene050885:CDS | 45.0% | |
| TAGAAATGCTAGAGGGTCTC+AGG | + | chr7.1:3048317-3048336 | MS.gene050885:CDS | 45.0% | |
| TCGTCATCCCGGAAATCTTA+TGG | + | chr7.1:3048546-3048565 | MS.gene050885:CDS | 45.0% | |
| TCTTCACCAATTCCACAGGT+TGG | - | chr7.1:3045422-3045441 | None:intergenic | 45.0% | |
| TGCGAATGCTACTGACACTT+GGG | + | chr7.1:3046518-3046537 | MS.gene050885:CDS | 45.0% | |
| TTACATCTCCTTCATCCAGG+TGG | - | chr7.1:3046006-3046025 | None:intergenic | 45.0% | |
| TTTAAGGAAGCTTGTCCACC+TGG | + | chr7.1:3045988-3046007 | MS.gene050885:CDS | 45.0% | |
| ! | AACCCTGTTCTAGGTCTAGA+AGG | - | chr7.1:3047730-3047749 | None:intergenic | 45.0% |
| ! | AAGCTGCTTTGAGTAGTGTG+AGG | + | chr7.1:3047058-3047077 | MS.gene050885:intron | 45.0% |
| ! | ACAGACATGATTCTGGGAGA+AGG | + | chr7.1:3048208-3048227 | MS.gene050885:CDS | 45.0% |
| ! | GCCGGAATGGATTCAATTGA+TGG | + | chr7.1:3045467-3045486 | MS.gene050885:CDS | 45.0% |
| ! | GCTTTTTGATCACTGGAGGA+GGG | - | chr7.1:3046672-3046691 | None:intergenic | 45.0% |
| ! | GTTTTTATCTGGGAGGGGAA+GGG | - | chr7.1:3047280-3047299 | None:intergenic | 45.0% |
| ! | TGTTCTAGGTCTAGAAGGAC+CGG | - | chr7.1:3047725-3047744 | None:intergenic | 45.0% |
| ! | TTGATTTCAGGTCGTTGTCG+AGG | + | chr7.1:3045894-3045913 | MS.gene050885:intron | 45.0% |
| ! | TTTTTATCTGGGAGGGGAAG+GGG | - | chr7.1:3047279-3047298 | None:intergenic | 45.0% |
| !! | AGGACCGGTTTGATTTGTTG+AGG | + | chr7.1:3045649-3045668 | MS.gene050885:CDS | 45.0% |
| !! | CCACTTTTCTGTCCACATTG+GGG | - | chr7.1:3045952-3045971 | None:intergenic | 45.0% |
| !! | GCTTCAAAAGTGGCTTGTTG+AGG | - | chr7.1:3046570-3046589 | None:intergenic | 45.0% |
| !! | GTTGTTGTTGTTGGTGATGG+TGG | - | chr7.1:3045357-3045376 | None:intergenic | 45.0% |
| !! | TGTTTTTATCTGGGAGGGGA+AGG | - | chr7.1:3047281-3047300 | None:intergenic | 45.0% |
| !!! | GGGTTTTAGGGTTTAAGAGC+CGG | - | chr7.1:3045128-3045147 | None:intergenic | 45.0% |
| AAGCTTGTCCACCTGGATGA+AGG | + | chr7.1:3045995-3046014 | MS.gene050885:CDS | 50.0% | |
| AGACGAGCAGAGAGAGAAGA+AGG | - | chr7.1:3045192-3045211 | None:intergenic | 50.0% | |
| AGATAACAATGCTCGGCGTG+TGG | + | chr7.1:3047627-3047646 | MS.gene050885:CDS | 50.0% | |
| AGGTGGAATTTGTGCATCCG+TGG | + | chr7.1:3045445-3045464 | MS.gene050885:CDS | 50.0% | |
| ATAACAATGCTCGGCGTGTG+GGG | + | chr7.1:3047629-3047648 | MS.gene050885:CDS | 50.0% | |
| ATCACTGGAGGAGGGAGATT+TGG | - | chr7.1:3046664-3046683 | None:intergenic | 50.0% | |
| CAAACAAAGAGGACGAGGCA+CGG | + | chr7.1:3046482-3046501 | MS.gene050885:CDS | 50.0% | |
| CATCAAACCGCTTCCGATCA+CGG | - | chr7.1:3048431-3048450 | None:intergenic | 50.0% | |
| CCCCAATGTGGACAGAAAAG+TGG | + | chr7.1:3045949-3045968 | MS.gene050885:CDS | 50.0% | |
| CCTACTCCAAAGAGACGTGT+TGG | + | chr7.1:3046718-3046737 | MS.gene050885:CDS | 50.0% | |
| CCTGGAAGCAACTGTCTCTT+GGG | - | chr7.1:3047190-3047209 | None:intergenic | 50.0% | |
| CTCAGGGAAGTAACCGTGAT+CGG | + | chr7.1:3048334-3048353 | MS.gene050885:CDS | 50.0% | |
| CTCCAAAGAGACGTGTTGGA+CGG | + | chr7.1:3046722-3046741 | MS.gene050885:CDS | 50.0% | |
| CTCTTCTTCTCACCAAACGC+CGG | + | chr7.1:3045106-3045125 | MS.gene050885:CDS | 50.0% | |
| GAAGTAACCGTGATCGGAAG+CGG | + | chr7.1:3048421-3048440 | MS.gene050885:CDS | 50.0% | |
| GACAGTTGCTTCCAGGAGAA+TGG | + | chr7.1:3047194-3047213 | MS.gene050885:CDS | 50.0% | |
| GATAACAATGCTCGGCGTGT+GGG | + | chr7.1:3047628-3047647 | MS.gene050885:CDS | 50.0% | |
| GGTAATGACAGAGGGTCTCA+GGG | + | chr7.1:3048399-3048418 | MS.gene050885:CDS | 50.0% | |
| GGTCCTTCTAGACCTAGAAC+AGG | + | chr7.1:3047724-3047743 | MS.gene050885:CDS | 50.0% | |
| TCCAAAGAGACGTGTTGGAC+GGG | + | chr7.1:3046723-3046742 | MS.gene050885:CDS | 50.0% | |
| TCCTGGAAGCAACTGTCTCT+TGG | - | chr7.1:3047191-3047210 | None:intergenic | 50.0% | |
| TCGGTACATTCCCATTCTCC+TGG | - | chr7.1:3047208-3047227 | None:intergenic | 50.0% | |
| TCTGCCTTTCCTTCTCTGGT+CGG | - | chr7.1:3048070-3048089 | None:intergenic | 50.0% | |
| TTGAGATGAAAAGGGGGGAC+TGG | + | chr7.1:3046752-3046771 | MS.gene050885:CDS | 50.0% | |
| TTTGCTACACCATGTGGACC+AGG | + | chr7.1:3046914-3046933 | MS.gene050885:intron | 50.0% | |
| ! | GGAGGAGGTTGTTTCACCTT+TGG | - | chr7.1:3046700-3046719 | None:intergenic | 50.0% |
| ! | GGAGGCTTTTTGATCACTGG+AGG | - | chr7.1:3046676-3046695 | None:intergenic | 50.0% |
| ! | GGAGGTTGTTTCACCTTTGG+TGG | - | chr7.1:3046697-3046716 | None:intergenic | 50.0% |
| ! | GGCTTTTTGATCACTGGAGG+AGG | - | chr7.1:3046673-3046692 | None:intergenic | 50.0% |
| ! | GGTGGAGGCTTTTTGATCAC+TGG | - | chr7.1:3046679-3046698 | None:intergenic | 50.0% |
| ! | GGTTCTGACTCTGACGAAGA+TGG | + | chr7.1:3048114-3048133 | MS.gene050885:CDS | 50.0% |
| ! | GGTTGTTTCACCTTTGGTGG+AGG | - | chr7.1:3046694-3046713 | None:intergenic | 50.0% |
| ! | GTTCTAGGTCTAGAAGGACC+GGG | - | chr7.1:3047724-3047743 | None:intergenic | 50.0% |
| ! | TGGTAATGACAGAGGGTCTC+AGG | + | chr7.1:3048398-3048417 | MS.gene050885:CDS | 50.0% |
| !! | ACACGTCTCTTTGGAGTAGG+AGG | - | chr7.1:3046718-3046737 | None:intergenic | 50.0% |
| !! | CCAACACGTCTCTTTGGAGT+AGG | - | chr7.1:3046721-3046740 | None:intergenic | 50.0% |
| !! | GGTGGTGGTGATTCTGAAAC+AGG | - | chr7.1:3045336-3045355 | None:intergenic | 50.0% |
| !! | GTTGTTGTTGGTGATGGTGG+TGG | - | chr7.1:3045354-3045373 | None:intergenic | 50.0% |
| !! | TTTGAGATGATGGAAGCCGG+AGG | + | chr7.1:3046162-3046181 | MS.gene050885:intron | 50.0% |
| !!! | TGGTTTTGGATGCCCCAATG+TGG | + | chr7.1:3045937-3045956 | MS.gene050885:CDS | 50.0% |
| ACGCCCACCTGATGAATTCC+TGG | + | chr7.1:3047429-3047448 | MS.gene050885:CDS | 55.0% | |
| AGGGTTTAAGAGCCGGCGTT+TGG | - | chr7.1:3045121-3045140 | None:intergenic | 55.0% | |
| ATTCGTCATCGTGGGACCCT+GGG | - | chr7.1:3047687-3047706 | None:intergenic | 55.0% | |
| CAACTGTCTCTTGGGACGCT+TGG | - | chr7.1:3047182-3047201 | None:intergenic | 55.0% | |
| CCCAAGAGACAGTTGCTTCC+AGG | + | chr7.1:3047187-3047206 | MS.gene050885:CDS | 55.0% | |
| CTCAGGGAAGTAACCGTGGT+CGG | + | chr7.1:3048583-3048602 | MS.gene050885:CDS | 55.0% | |
| CTCGAGGAAATGACCGGAGT+AGG | + | chr7.1:3048664-3048683 | MS.gene050885:CDS | 55.0% | |
| GACCAGAGAAGGAAAGGCAG+AGG | + | chr7.1:3048069-3048088 | MS.gene050885:CDS | 55.0% | |
| GACCTCTGCCTTTCCTTCTC+TGG | - | chr7.1:3048074-3048093 | None:intergenic | 55.0% | |
| GAGGGTCTCGAGGAAATGAC+CGG | + | chr7.1:3048658-3048677 | MS.gene050885:CDS | 55.0% | |
| GGAATTTGTGCATCCGTGGC+CGG | + | chr7.1:3045449-3045468 | MS.gene050885:CDS | 55.0% | |
| GGCAAGAGGTTTCCAATGCC+TGG | + | chr7.1:3047512-3047531 | MS.gene050885:CDS | 55.0% | |
| GGGAATGATAGAGGGTCTCG+AGG | + | chr7.1:3048648-3048667 | MS.gene050885:CDS | 55.0% | |
| TAAGATGGGCAGTCGGCAAG+AGG | + | chr7.1:3047498-3047517 | MS.gene050885:CDS | 55.0% | |
| TATTCGTCATCGTGGGACCC+TGG | - | chr7.1:3047688-3047707 | None:intergenic | 55.0% | |
| TCCCGTCCAACACGTCTCTT+TGG | - | chr7.1:3046727-3046746 | None:intergenic | 55.0% | |
| TCTGACGAAGATGGCAGTGC+TGG | + | chr7.1:3048123-3048142 | MS.gene050885:CDS | 55.0% | |
| TCTGGTCGGCAGCAGAAACA+TGG | - | chr7.1:3048056-3048075 | None:intergenic | 55.0% | |
| TTTCTGCTGCCGACCAGAGA+AGG | + | chr7.1:3048058-3048077 | MS.gene050885:CDS | 55.0% | |
| ! | TTTCAGGTCGTTGTCGAGGC+AGG | + | chr7.1:3045898-3045917 | MS.gene050885:intron | 55.0% |
| !! | CGAAGAATAGGAGCGTCCCA+GGG | + | chr7.1:3047668-3047687 | MS.gene050885:CDS | 55.0% |
| !! | CGTCTCTTTGGAGTAGGAGG+AGG | - | chr7.1:3046715-3046734 | None:intergenic | 55.0% |
| !! | GTTGTTGGTGATGGTGGTGG+TGG | - | chr7.1:3045351-3045370 | None:intergenic | 55.0% |
| AGGTCTAGAAGGACCGGGAC+CGG | - | chr7.1:3047719-3047738 | None:intergenic | 60.0% | |
| GCTGCCGACCAGAGAAGGAA+AGG | + | chr7.1:3048063-3048082 | MS.gene050885:CDS | 60.0% | |
| GGGTCTCAGGGAAGTAACCG+TGG | + | chr7.1:3048330-3048349 | MS.gene050885:CDS | 60.0% | |
| TTGTGCATCCGTGGCCGGAA+TGG | + | chr7.1:3045454-3045473 | MS.gene050885:CDS | 60.0% | |
| !! | GCGAAGAATAGGAGCGTCCC+AGG | + | chr7.1:3047667-3047686 | MS.gene050885:CDS | 60.0% |
| ACAATGCTCGGCGTGTGGGG+TGG | + | chr7.1:3047632-3047651 | MS.gene050885:CDS | 65.0% | |
| CAATGCTCGGCGTGTGGGGT+GGG | + | chr7.1:3047633-3047652 | MS.gene050885:CDS | 65.0% | |
| ! | GATGACAGGGAGCACGGCAG+AGG | + | chr7.1:3048696-3048715 | MS.gene050885:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3045087 | 3048794 | 3045087 | ID=MS.gene050885 |
| chr7.1 | mRNA | 3045087 | 3048794 | 3045087 | ID=MS.gene050885.t1;Parent=MS.gene050885 |
| chr7.1 | exon | 3045087 | 3045670 | 3045087 | ID=MS.gene050885.t1.exon1;Parent=MS.gene050885.t1 |
| chr7.1 | CDS | 3045087 | 3045670 | 3045087 | ID=cds.MS.gene050885.t1;Parent=MS.gene050885.t1 |
| chr7.1 | exon | 3045904 | 3046021 | 3045904 | ID=MS.gene050885.t1.exon2;Parent=MS.gene050885.t1 |
| chr7.1 | CDS | 3045904 | 3046021 | 3045904 | ID=cds.MS.gene050885.t1;Parent=MS.gene050885.t1 |
| chr7.1 | exon | 3046430 | 3046785 | 3046430 | ID=MS.gene050885.t1.exon3;Parent=MS.gene050885.t1 |
| chr7.1 | CDS | 3046430 | 3046785 | 3046430 | ID=cds.MS.gene050885.t1;Parent=MS.gene050885.t1 |
| chr7.1 | exon | 3047129 | 3047227 | 3047129 | ID=MS.gene050885.t1.exon4;Parent=MS.gene050885.t1 |
| chr7.1 | CDS | 3047129 | 3047227 | 3047129 | ID=cds.MS.gene050885.t1;Parent=MS.gene050885.t1 |
| chr7.1 | exon | 3047375 | 3048794 | 3047375 | ID=MS.gene050885.t1.exon5;Parent=MS.gene050885.t1 |
| chr7.1 | CDS | 3047375 | 3048794 | 3047375 | ID=cds.MS.gene050885.t1;Parent=MS.gene050885.t1 |
| Gene Sequence |
| Protein sequence |
