Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21285.t1 | AES98296.2 | 94.3 | 106 | 6 | 0 | 1 | 106 | 7 | 112 | 2.00E-50 | 208.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21285.t1 | Q39236 | 84.9 | 106 | 16 | 0 | 1 | 106 | 1 | 106 | 1.8e-47 | 190.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21285.t1 | G7JYH6 | 94.3 | 106 | 6 | 0 | 1 | 106 | 7 | 112 | 1.5e-50 | 208.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049669 | MS.gene21285 | 0.819917 | 9.03E-53 | -1.69E-46 |
| MS.gene052176 | MS.gene21285 | 0.805974 | 1.03E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene21285 | 0.801118 | 1.05E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene21285 | 0.802641 | 5.10E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene21285 | -0.804878 | 1.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21285.t1 | MTR_5g066740 | 94.340 | 106 | 6 | 0 | 1 | 106 | 7 | 112 | 2.13e-73 | 216 |
| MS.gene21285.t1 | MTR_7g005540 | 89.623 | 106 | 11 | 0 | 1 | 106 | 1 | 106 | 7.53e-70 | 206 |
| MS.gene21285.t1 | MTR_7g005540 | 88.333 | 60 | 7 | 0 | 1 | 60 | 1 | 60 | 5.04e-33 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21285.t1 | AT4G24440 | 84.906 | 106 | 16 | 0 | 1 | 106 | 1 | 106 | 7.53e-67 | 199 |
| MS.gene21285.t1 | AT4G24440 | 84.906 | 106 | 16 | 0 | 1 | 106 | 1 | 106 | 7.53e-67 | 199 |
Find 33 sgRNAs with CRISPR-Local
Find 433 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGACGTGATTCTGGTTTA+AGG | 0.169784 | 5.1:+51756503 | None:intergenic |
| TCGGTCTTCCGACGTGATTC+TGG | 0.200864 | 5.1:+51756496 | None:intergenic |
| GTGATTCTGGTTTAAGGATT+TGG | 0.257023 | 5.1:+51756509 | None:intergenic |
| AAACTGAACGAGAATCTTAA+TGG | 0.262548 | 5.1:+51762334 | None:intergenic |
| GACAGATACTTTGGATGATA+TGG | 0.265182 | 5.1:-51762387 | MS.gene21285:CDS |
| GATTCTCGTTCAGTTTGATA+AGG | 0.442125 | 5.1:-51762327 | MS.gene21285:intron |
| TAAGAGCAAGGTTTCTATCA+AGG | 0.442664 | 5.1:-51762014 | MS.gene21285:intron |
| GTAGTCTATGACTGAGGCTC+TGG | 0.444634 | 5.1:-51762047 | MS.gene21285:intron |
| AGAATCTTAATGGCATGTTC+AGG | 0.445439 | 5.1:+51762344 | None:intergenic |
| TTGTGAGTCGTCGAAGTTTG+TGG | 0.469474 | 5.1:+51756414 | None:intergenic |
| TGTGGGTTTGTGTGTCGGTT+TGG | 0.469543 | 5.1:+51756461 | None:intergenic |
| AAGTTTGTGGGCTGCGATGA+CGG | 0.472320 | 5.1:+51756427 | None:intergenic |
| GTTTGTGTGTCGGTTTGGTT+CGG | 0.476319 | 5.1:+51756466 | None:intergenic |
| GGTTTGGTTCGGATGTGCTT+CGG | 0.481666 | 5.1:+51756477 | None:intergenic |
| CAAAGCATCTTGTAAGATGA+AGG | 0.487212 | 5.1:+51759201 | None:intergenic |
| GGTGACAGATCCGGTTGAAT+TGG | 0.488037 | 5.1:+51756366 | None:intergenic |
| ACAGTGCTTGACAGATACTT+TGG | 0.488404 | 5.1:-51762396 | MS.gene21285:CDS |
| GCTGCTGCGGGTGACAGATC+CGG | 0.489680 | 5.1:+51756357 | None:intergenic |
| ACGTCGAACACCAATTCAAC+CGG | 0.503025 | 5.1:-51756376 | MS.gene21285:CDS |
| TGTGAGTCGTCGAAGTTTGT+GGG | 0.506037 | 5.1:+51756415 | None:intergenic |
| TTGGATGATATGGTTCAGAA+TGG | 0.519938 | 5.1:-51762377 | MS.gene21285:CDS |
| TGTTCGACGTCGCGGTTCGT+CGG | 0.521588 | 5.1:+51756389 | None:intergenic |
| ACTGATGTGGGTTTGTGTGT+CGG | 0.523014 | 5.1:+51756456 | None:intergenic |
| GAAGACAAGCAAGAGAATGT+TGG | 0.560487 | 5.1:-51759169 | MS.gene21285:CDS |
| ATGACGGTTTGCGACTGATG+TGG | 0.570293 | 5.1:+51756443 | None:intergenic |
| TGACGGTTTGCGACTGATGT+GGG | 0.571986 | 5.1:+51756444 | None:intergenic |
| GCATGTGACTCAAAGTTGCT+TGG | 0.601308 | 5.1:-51759130 | MS.gene21285:intron |
| TGTTGGACGTGTTAAAATTG+TGG | 0.603638 | 5.1:-51759152 | MS.gene21285:CDS |
| AGTGCTGTTGGGTTTAAACA+CGG | 0.619895 | 5.1:+51756325 | None:intergenic |
| TGAATTGGTGTTCGACGTCG+CGG | 0.621457 | 5.1:+51756381 | None:intergenic |
| GGAGACGAAAGTTAAGAGCA+AGG | 0.632666 | 5.1:-51762026 | MS.gene21285:CDS |
| TCCTTAAACCAGAATCACGT+CGG | 0.656508 | 5.1:-51756504 | MS.gene21285:CDS |
| CTTTATCGTAGATCGACGAT+CGG | 0.684237 | 5.1:-51762419 | MS.gene21285:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGATACAAATAAATAA+TGG | + | chr5.1:51756679-51756698 | None:intergenic | 10.0% |
| !! | AGATAAAATTCAATAAATAA+GGG | + | chr5.1:51759061-51759080 | None:intergenic | 10.0% |
| !! | ATATATATATAAGATAAAGT+TGG | + | chr5.1:51756585-51756604 | None:intergenic | 10.0% |
| !! | CTTTATAAATCATAATATTA+AGG | + | chr5.1:51760829-51760848 | None:intergenic | 10.0% |
| !! | TAAAAAACTTAAATAAAAGA+TGG | + | chr5.1:51761496-51761515 | None:intergenic | 10.0% |
| !! | TAGATAAAATTCAATAAATA+AGG | + | chr5.1:51759062-51759081 | None:intergenic | 10.0% |
| !! | TTTATTTGTGAATATTATTT+GGG | + | chr5.1:51761672-51761691 | None:intergenic | 10.0% |
| !!! | ATAAAATATTATTTTGCATA+TGG | - | chr5.1:51759294-51759313 | MS.gene21285:intron | 10.0% |
| !!! | TAAAATATTATTTTGCATAT+GGG | - | chr5.1:51759295-51759314 | MS.gene21285:intron | 10.0% |
| !!! | TCAAAATATCAATTTTTTAA+GGG | - | chr5.1:51760752-51760771 | MS.gene21285:intron | 10.0% |
| !!! | TTTAAAATGTTAAGTAATTA+GGG | + | chr5.1:51760032-51760051 | None:intergenic | 10.0% |
| !!! | TTTTAAAATGTTAAGTAATT+AGG | + | chr5.1:51760033-51760052 | None:intergenic | 10.0% |
| !! | AAAAAAAATGAAATGAAGAA+AGG | + | chr5.1:51761462-51761481 | None:intergenic | 15.0% |
| !! | AAAATACAAAAATAAAGGAA+AGG | + | chr5.1:51761549-51761568 | None:intergenic | 15.0% |
| !! | AGTAATATTAAATGAATGAT+AGG | - | chr5.1:51756615-51756634 | MS.gene21285:intron | 15.0% |
| !! | ATGAAATAGATTATTAGAAA+AGG | - | chr5.1:51757564-51757583 | MS.gene21285:intron | 15.0% |
| !! | TGTGAATTAAAATTTCAAAT+TGG | - | chr5.1:51761108-51761127 | MS.gene21285:intron | 15.0% |
| !! | TTAAACTGAAATATTCAATT+TGG | - | chr5.1:51757783-51757802 | MS.gene21285:intron | 15.0% |
| !! | TTATCTTATATATATATGAC+CGG | - | chr5.1:51756588-51756607 | MS.gene21285:intron | 15.0% |
| !!! | AAAATATCAATTTTTTAAGG+GGG | - | chr5.1:51760754-51760773 | MS.gene21285:intron | 15.0% |
| !!! | AATGTTGTAGTATATATTTT+GGG | - | chr5.1:51756971-51756990 | MS.gene21285:intron | 15.0% |
| !!! | AGATTTTTCAGTTAAAAATT+CGG | - | chr5.1:51761368-51761387 | MS.gene21285:intron | 15.0% |
| !!! | ATTTTGTTTTCATCTTTTTT+TGG | - | chr5.1:51758499-51758518 | MS.gene21285:intron | 15.0% |
| !!! | CAAAATATCAATTTTTTAAG+GGG | - | chr5.1:51760753-51760772 | MS.gene21285:intron | 15.0% |
| !!! | CTTTATTTGTGAATATTATT+TGG | + | chr5.1:51761673-51761692 | None:intergenic | 15.0% |
| !!! | GTCAAAATATCAATTTTTTA+AGG | - | chr5.1:51760751-51760770 | MS.gene21285:intron | 15.0% |
| !!! | GTTATTTTGATAATATAACA+TGG | - | chr5.1:51759837-51759856 | MS.gene21285:intron | 15.0% |
| !!! | TTCTAAAATTTTAATGCTTA+AGG | + | chr5.1:51760918-51760937 | None:intergenic | 15.0% |
| !!! | TTTATAATGATTTATTGACT+TGG | + | chr5.1:51757325-51757344 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTCATCTTTTTTT+GGG | - | chr5.1:51758500-51758519 | MS.gene21285:intron | 15.0% |
| !! | AAAAAAAAAACCCATTTAAC+CGG | + | chr5.1:51758624-51758643 | None:intergenic | 20.0% |
| !! | AAAAGTAATAAATGATGCAT+TGG | + | chr5.1:51759025-51759044 | None:intergenic | 20.0% |
| !! | AAACAAAAATGAATAGAGAA+GGG | + | chr5.1:51761439-51761458 | None:intergenic | 20.0% |
| !! | AAATTCAATAAATAAGGGTA+TGG | + | chr5.1:51759056-51759075 | None:intergenic | 20.0% |
| !! | AATAGATTATTAGAAAAGGA+TGG | - | chr5.1:51757568-51757587 | MS.gene21285:intron | 20.0% |
| !! | ACTGTTATGATAGATTTAAA+AGG | - | chr5.1:51759783-51759802 | MS.gene21285:intron | 20.0% |
| !! | ATAAATAACGCATTAATTTC+TGG | - | chr5.1:51757527-51757546 | MS.gene21285:intron | 20.0% |
| !! | ATATGGAATGTGATAATAAA+TGG | - | chr5.1:51760093-51760112 | MS.gene21285:intron | 20.0% |
| !! | ATGACAATAATCATAATGTT+GGG | + | chr5.1:51761290-51761309 | None:intergenic | 20.0% |
| !! | ATGTATATGGTTCAAAATTT+AGG | + | chr5.1:51756548-51756567 | None:intergenic | 20.0% |
| !! | GTAAAAATAATAATGTTGCA+TGG | + | chr5.1:51760059-51760078 | None:intergenic | 20.0% |
| !! | TAATTAAGGGAGTTAATATT+AGG | - | chr5.1:51760337-51760356 | MS.gene21285:intron | 20.0% |
| !! | TAGAATTTCGTCATAATTAA+GGG | - | chr5.1:51760324-51760343 | MS.gene21285:intron | 20.0% |
| !! | TATGACAATAATCATAATGT+TGG | + | chr5.1:51761291-51761310 | None:intergenic | 20.0% |
| !! | TCAATGAAAATTGATGTATA+TGG | + | chr5.1:51756561-51756580 | None:intergenic | 20.0% |
| !! | TCTATGAAAAATTCTCTTTA+TGG | - | chr5.1:51756522-51756541 | MS.gene21285:intron | 20.0% |
| !! | TGATAATATAACATGGTAAT+TGG | - | chr5.1:51759844-51759863 | MS.gene21285:intron | 20.0% |
| !! | TTTGATTGTAACATCATATT+AGG | + | chr5.1:51761248-51761267 | None:intergenic | 20.0% |
| !!! | AAAACATCCTTTTTTTTAAG+GGG | + | chr5.1:51760410-51760429 | None:intergenic | 20.0% |
| !!! | AAATAAACAAGTTTGTTTAC+TGG | + | chr5.1:51759910-51759929 | None:intergenic | 20.0% |
| !!! | AAATATCAATTTTTTAAGGG+GGG | - | chr5.1:51760755-51760774 | MS.gene21285:intron | 20.0% |
| !!! | AACATAAAAAAGATGTTTTG+AGG | + | chr5.1:51759368-51759387 | None:intergenic | 20.0% |
| !!! | ATCTAAAGTCTTAAAACATT+AGG | + | chr5.1:51761185-51761204 | None:intergenic | 20.0% |
| !!! | CAAAACATCCTTTTTTTTAA+GGG | + | chr5.1:51760411-51760430 | None:intergenic | 20.0% |
| !!! | GAATGTTGTAGTATATATTT+TGG | - | chr5.1:51756970-51756989 | MS.gene21285:intron | 20.0% |
| !!! | TCAAAACATCCTTTTTTTTA+AGG | + | chr5.1:51760412-51760431 | None:intergenic | 20.0% |
| !!! | TGAGTTTTTTCACTTAATTT+TGG | + | chr5.1:51760894-51760913 | None:intergenic | 20.0% |
| !!! | TTTGTTTTCATCTTTTTTTG+GGG | - | chr5.1:51758501-51758520 | MS.gene21285:intron | 20.0% |
| ! | AAAAAAATTGTGTGGAATGA+TGG | - | chr5.1:51756847-51756866 | MS.gene21285:intron | 25.0% |
| ! | AAAATCAGCTAATCAAAAGT+GGG | + | chr5.1:51760450-51760469 | None:intergenic | 25.0% |
| ! | ACATTAATAATCTAATGCCA+TGG | + | chr5.1:51759819-51759838 | None:intergenic | 25.0% |
| ! | ATAGCAGAATTTCTACATAA+TGG | - | chr5.1:51758862-51758881 | MS.gene21285:intron | 25.0% |
| ! | ATGAAGATAAAACTATTCTG+TGG | + | chr5.1:51758711-51758730 | None:intergenic | 25.0% |
| ! | ATTATGTAGAAATTCTGCTA+TGG | + | chr5.1:51758863-51758882 | None:intergenic | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | - | chr5.1:51759093-51759112 | MS.gene21285:intron | 25.0% |
| ! | CGCTATAAAATTAAGTAACA+AGG | + | chr5.1:51758304-51758323 | None:intergenic | 25.0% |
| ! | CTAGAATTTCGTCATAATTA+AGG | - | chr5.1:51760323-51760342 | MS.gene21285:intron | 25.0% |
| ! | GAAAATAAGAAGAAAAGTCA+GGG | + | chr5.1:51759496-51759515 | None:intergenic | 25.0% |
| ! | GAAACAAAAATGAATAGAGA+AGG | + | chr5.1:51761440-51761459 | None:intergenic | 25.0% |
| ! | GGATTGAAGTTATTTATGTT+AGG | - | chr5.1:51760222-51760241 | MS.gene21285:intron | 25.0% |
| ! | GTAAATAGAGAACATAAAAG+AGG | + | chr5.1:51758088-51758107 | None:intergenic | 25.0% |
| ! | GTTATTAGGATATATGCTTA+GGG | - | chr5.1:51756872-51756891 | MS.gene21285:intron | 25.0% |
| ! | GTTTGTGAATATGTAAATAG+AGG | + | chr5.1:51757065-51757084 | None:intergenic | 25.0% |
| ! | TACAAAATCGACAAGTAAAA+AGG | + | chr5.1:51759998-51760017 | None:intergenic | 25.0% |
| ! | TACAGAGAGAGATAAATATA+TGG | - | chr5.1:51760076-51760095 | MS.gene21285:intron | 25.0% |
| ! | TCATTTAATATTACTCACTC+CGG | + | chr5.1:51756610-51756629 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | - | chr5.1:51759092-51759111 | MS.gene21285:intron | 25.0% |
| ! | TGAAAATAAGAAGAAAAGTC+AGG | + | chr5.1:51759497-51759516 | None:intergenic | 25.0% |
| ! | TGTAGGTTTATGCAATTTAA+TGG | - | chr5.1:51757427-51757446 | MS.gene21285:intron | 25.0% |
| ! | TGTATATATGGAACAGAAAA+TGG | - | chr5.1:51758660-51758679 | MS.gene21285:intron | 25.0% |
| ! | TGTTATTAGGATATATGCTT+AGG | - | chr5.1:51756871-51756890 | MS.gene21285:intron | 25.0% |
| ! | TTACAAAGTGTAACAGAAAA+TGG | - | chr5.1:51757606-51757625 | MS.gene21285:intron | 25.0% |
| ! | TTGAAGTTATTTATGTTAGG+AGG | - | chr5.1:51760225-51760244 | MS.gene21285:intron | 25.0% |
| ! | TTGATTGATCATAATCAATG+AGG | - | chr5.1:51759677-51759696 | MS.gene21285:intron | 25.0% |
| ! | TTTGTTCAAAGTTCAGTTTA+TGG | - | chr5.1:51758153-51758172 | MS.gene21285:intron | 25.0% |
| !! | AAGGTGTTAAAAAAATTGTG+TGG | - | chr5.1:51756839-51756858 | MS.gene21285:intron | 25.0% |
| !! | ATATATCATTCTAACTTGTG+TGG | - | chr5.1:51760945-51760964 | MS.gene21285:intron | 25.0% |
| !! | ATCTTTTGTTACATAGTGTA+AGG | - | chr5.1:51756820-51756839 | MS.gene21285:intron | 25.0% |
| !! | CAAACTTGTTTATTTATCTC+TGG | - | chr5.1:51759915-51759934 | MS.gene21285:intron | 25.0% |
| !! | CACTGTTTTCATTATATTGT+GGG | - | chr5.1:51759216-51759235 | MS.gene21285:CDS | 25.0% |
| !! | TATTTATCTCTGGAAAACTA+TGG | - | chr5.1:51759925-51759944 | MS.gene21285:intron | 25.0% |
| !! | TTATGTAGCAATTTTCTTTG+TGG | - | chr5.1:51758592-51758611 | MS.gene21285:intron | 25.0% |
| !! | TTATTTTCATGACTTTTGAG+TGG | - | chr5.1:51758121-51758140 | MS.gene21285:intron | 25.0% |
| !! | TTTTCTTTTATAGTCAGTGT+GGG | + | chr5.1:51761890-51761909 | None:intergenic | 25.0% |
| !! | TTTTGGATCTGATCTAATAT+TGG | - | chr5.1:51756494-51756513 | MS.gene21285:CDS | 25.0% |
| !!! | AAAACTTTTCAAGCAATTCA+TGG | + | chr5.1:51757111-51757130 | None:intergenic | 25.0% |
| !!! | AAACATCCTTTTTTTTAAGG+GGG | + | chr5.1:51760409-51760428 | None:intergenic | 25.0% |
| !!! | ATATGTGTTGGTTTAATGTT+CGG | - | chr5.1:51760259-51760278 | MS.gene21285:intron | 25.0% |
| !!! | ATTTTCACTTTTGAACCATA+GGG | - | chr5.1:51759510-51759529 | MS.gene21285:intron | 25.0% |
| !!! | TATTTTCACTTTTGAACCAT+AGG | - | chr5.1:51759509-51759528 | MS.gene21285:intron | 25.0% |
| !!! | TGCTTGAAAAGTTTTGTTAT+TGG | - | chr5.1:51757116-51757135 | MS.gene21285:intron | 25.0% |
| !!! | TTATTGATTTGAATTGCATG+TGG | - | chr5.1:51756697-51756716 | MS.gene21285:intron | 25.0% |
| !!! | TTGAGTGTTGATGAAATAAT+TGG | + | chr5.1:51762019-51762038 | None:intergenic | 25.0% |
| !!! | TTGTAGTATATATTTTGGGT+TGG | - | chr5.1:51756975-51756994 | MS.gene21285:intron | 25.0% |
| !!! | TTGTTTTCATCTTTTTTTGG+GGG | - | chr5.1:51758502-51758521 | MS.gene21285:intron | 25.0% |
| AAAAGTCAGGGAAAGAAAAT+GGG | + | chr5.1:51759484-51759503 | None:intergenic | 30.0% | |
| AAAATCAGCCAATCAAAAGT+GGG | - | chr5.1:51760714-51760733 | MS.gene21285:intron | 30.0% | |
| AAACTGAACGAGAATCTTAA+TGG | + | chr5.1:51756441-51756460 | None:intergenic | 30.0% | |
| AAAGACAGGTAAAAAAGAAC+AGG | - | chr5.1:51760183-51760202 | MS.gene21285:intron | 30.0% | |
| AACACTCCACTCATAATATA+GGG | + | chr5.1:51759184-51759203 | None:intergenic | 30.0% | |
| AACATTGAATAAAAGAGTGG+AGG | - | chr5.1:51760863-51760882 | MS.gene21285:intron | 30.0% | |
| AACCTTTCTGTAATCTTTAG+AGG | + | chr5.1:51758763-51758782 | None:intergenic | 30.0% | |
| AAGACAGGTAAAAAAGAACA+GGG | - | chr5.1:51760184-51760203 | MS.gene21285:intron | 30.0% | |
| AAGTACAATGTCTATGAAAG+TGG | - | chr5.1:51757930-51757949 | MS.gene21285:intron | 30.0% | |
| AAGTGACAATTATTGTGAGA+TGG | + | chr5.1:51758959-51758978 | None:intergenic | 30.0% | |
| AATCAAATAAGTGACGTCAA+TGG | + | chr5.1:51758426-51758445 | None:intergenic | 30.0% | |
| AATTTGCAGTTTGAGAGATA+AGG | - | chr5.1:51757885-51757904 | MS.gene21285:intron | 30.0% | |
| ACTAGAAATCTGTAAAGACA+GGG | + | chr5.1:51757193-51757212 | None:intergenic | 30.0% | |
| ACTTTCATAGACATTGTACT+TGG | + | chr5.1:51757931-51757950 | None:intergenic | 30.0% | |
| AGTACAATGTCTATGAAAGT+GGG | - | chr5.1:51757931-51757950 | MS.gene21285:intron | 30.0% | |
| AGTGTAACAGAAAATGGATA+TGG | - | chr5.1:51757612-51757631 | MS.gene21285:intron | 30.0% | |
| ATAAATAATGGCAAACACTC+TGG | + | chr5.1:51756667-51756686 | None:intergenic | 30.0% | |
| ATAAGTGAATCCTTCTTTAG+GGG | + | chr5.1:51760578-51760597 | None:intergenic | 30.0% | |
| ATCGTAACGACTAAAACTTA+TGG | + | chr5.1:51758398-51758417 | None:intergenic | 30.0% | |
| ATTCAATGATTATGCAGTAC+AGG | + | chr5.1:51758926-51758945 | None:intergenic | 30.0% | |
| ATTTGCAGTTTGAGAGATAA+GGG | - | chr5.1:51757886-51757905 | MS.gene21285:intron | 30.0% | |
| CAAAATCAGCTAATCAAAAG+TGG | + | chr5.1:51760451-51760470 | None:intergenic | 30.0% | |
| CCACAATATAATGAAAACAG+TGG | + | chr5.1:51759218-51759237 | None:intergenic | 30.0% | |
| CCATATATACATTCATCATG+AGG | + | chr5.1:51758651-51758670 | None:intergenic | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | + | chr5.1:51759096-51759115 | None:intergenic | 30.0% | |
| CCTCATGATGAATGTATATA+TGG | - | chr5.1:51758648-51758667 | MS.gene21285:intron | 30.0% | |
| GACAAGTAAAAAGGAATCAA+GGG | + | chr5.1:51759989-51760008 | None:intergenic | 30.0% | |
| GATAAGTGAATCCTTCTTTA+GGG | + | chr5.1:51760579-51760598 | None:intergenic | 30.0% | |
| GATACAAAGATGCTGATAAA+TGG | - | chr5.1:51760521-51760540 | MS.gene21285:intron | 30.0% | |
| TAAAATCAGCCAATCAAAAG+TGG | - | chr5.1:51760713-51760732 | MS.gene21285:intron | 30.0% | |
| TAACACTCCACTCATAATAT+AGG | + | chr5.1:51759185-51759204 | None:intergenic | 30.0% | |
| TACTAGAAATCTGTAAAGAC+AGG | + | chr5.1:51757194-51757213 | None:intergenic | 30.0% | |
| TATAACACACGACATTCAAA+TGG | - | chr5.1:51758246-51758265 | MS.gene21285:intron | 30.0% | |
| TCGTAACGACTAAAACTTAT+GGG | + | chr5.1:51758397-51758416 | None:intergenic | 30.0% | |
| TGATAAGTGAATCCTTCTTT+AGG | + | chr5.1:51760580-51760599 | None:intergenic | 30.0% | |
| TGTTTCAAAAAGTTGCGATT+TGG | - | chr5.1:51760383-51760402 | MS.gene21285:intron | 30.0% | |
| TTACCATTGAAATCAACACA+CGG | - | chr5.1:51759139-51759158 | MS.gene21285:CDS | 30.0% | |
| TTAGTTCCTGCAAGAAATTA+AGG | + | chr5.1:51759756-51759775 | None:intergenic | 30.0% | |
| TTATATAGATTCTGAGTGTG+AGG | - | chr5.1:51758836-51758855 | MS.gene21285:intron | 30.0% | |
| TTATGGTTTATCAATCAGCT+TGG | + | chr5.1:51757293-51757312 | None:intergenic | 30.0% | |
| TTGACGTCACTTATTTGATT+AGG | - | chr5.1:51758426-51758445 | MS.gene21285:intron | 30.0% | |
| TTTCAACAAAAAGTTACACG+AGG | + | chr5.1:51758021-51758040 | None:intergenic | 30.0% | |
| ! | AATAAATAAGGGTATGGTAG+TGG | + | chr5.1:51759050-51759069 | None:intergenic | 30.0% |
| ! | ATTAAGTAACAAGGTACTTG+TGG | + | chr5.1:51758295-51758314 | None:intergenic | 30.0% |
| ! | ATTTTCTTTGTGGAAATGTC+CGG | - | chr5.1:51758602-51758621 | MS.gene21285:intron | 30.0% |
| ! | CCACTCTTTTATTCAATGTT+GGG | + | chr5.1:51760863-51760882 | None:intergenic | 30.0% |
| ! | CCACTGTTTTCATTATATTG+TGG | - | chr5.1:51759215-51759234 | MS.gene21285:CDS | 30.0% |
| ! | GAAAAATCTGAAATCGATCA+GGG | + | chr5.1:51761357-51761376 | None:intergenic | 30.0% |
| ! | GATTTTTACAGCATATGTGT+TGG | - | chr5.1:51760247-51760266 | MS.gene21285:intron | 30.0% |
| ! | GTTTCAAAAAGTTGCGATTT+TGG | + | chr5.1:51760403-51760384 | None:intergenic | 30.0% |
| ! | GTTTTCTTTTATAGTCAGTG+TGG | + | chr5.1:51761891-51761910 | None:intergenic | 30.0% |
| ! | TACCTCTAAAGATTACAGAA+AGG | - | chr5.1:51758758-51758777 | MS.gene21285:intron | 30.0% |
| ! | TCCACTCTTTTATTCAATGT+TGG | + | chr5.1:51760864-51760883 | None:intergenic | 30.0% |
| ! | TGAAAAATCTGAAATCGATC+AGG | + | chr5.1:51761358-51761377 | None:intergenic | 30.0% |
| !! | CTAAAGTGACTATTGTTTTG+AGG | + | chr5.1:51758998-51759017 | None:intergenic | 30.0% |
| !! | TGGATATGGTTTGATTTTGA+CGG | - | chr5.1:51757626-51757645 | MS.gene21285:intron | 30.0% |
| !! | TGTTATGAGCTCTAGATATT+TGG | - | chr5.1:51756938-51756957 | MS.gene21285:intron | 30.0% |
| !!! | AAAAAGATGTTTTGAGGTGT+TGG | + | chr5.1:51759362-51759381 | None:intergenic | 30.0% |
| !!! | AGATTTTTTTGCGATGGAAT+TGG | + | chr5.1:51761986-51762005 | None:intergenic | 30.0% |
| !!! | ATCGCAACTTTTTGAAACAT+AGG | + | chr5.1:51760382-51760401 | None:intergenic | 30.0% |
| !!! | TCGCAACTTTTTGAAACATA+GGG | + | chr5.1:51760381-51760400 | None:intergenic | 30.0% |
| AAAAGGAATCAAGGGAGTAA+TGG | + | chr5.1:51759981-51760000 | None:intergenic | 35.0% | |
| AAAATATAATGAACCCAGCG+TGG | - | chr5.1:51757819-51757838 | MS.gene21285:intron | 35.0% | |
| AAAGTTGTTTGGATTGAGAC+TGG | + | chr5.1:51761744-51761763 | None:intergenic | 35.0% | |
| AAATATAATGAACCCAGCGT+GGG | - | chr5.1:51757820-51757839 | MS.gene21285:intron | 35.0% | |
| AAATTTATGGGTGAGGTTGA+GGG | - | chr5.1:51757844-51757863 | MS.gene21285:intron | 35.0% | |
| AACACATTGGCAACATGAAA+TGG | + | chr5.1:51759323-51759342 | None:intergenic | 35.0% | |
| AACATCTCTCCATTAAGTGT+GGG | + | chr5.1:51761077-51761096 | None:intergenic | 35.0% | |
| AATTGCATAAACCTACAACC+AGG | + | chr5.1:51757424-51757443 | None:intergenic | 35.0% | |
| AGAAAGTGATGTTTACGACA+CGG | + | chr5.1:51757142-51757161 | None:intergenic | 35.0% | |
| AGAATCTTAATGGCATGTTC+AGG | + | chr5.1:51756431-51756450 | None:intergenic | 35.0% | |
| AGACAGGTAAAAAAGAACAG+GGG | - | chr5.1:51760185-51760204 | MS.gene21285:intron | 35.0% | |
| AGATACGATTGACAGTTTCA+TGG | + | chr5.1:51761706-51761725 | None:intergenic | 35.0% | |
| ATAATCTAATGCCATGGAGA+TGG | + | chr5.1:51759813-51759832 | None:intergenic | 35.0% | |
| ATAATGTTGGGACTTATGTG+GGG | + | chr5.1:51761278-51761297 | None:intergenic | 35.0% | |
| ATCGTTCCCTATATTATGAG+TGG | - | chr5.1:51759175-51759194 | MS.gene21285:CDS | 35.0% | |
| ATGGAGTTAACCTGAATCTT+TGG | - | chr5.1:51758881-51758900 | MS.gene21285:intron | 35.0% | |
| ATTAAGGCCATTCATCACTA+TGG | + | chr5.1:51759740-51759759 | None:intergenic | 35.0% | |
| ATTGCATAAACCTACAACCA+GGG | + | chr5.1:51757423-51757442 | None:intergenic | 35.0% | |
| ATTTGGCCCCCTTAAAAAAA+AGG | - | chr5.1:51760400-51760419 | MS.gene21285:intron | 35.0% | |
| CACAGCGAAAATTTCTTTAC+AGG | + | chr5.1:51757238-51757257 | None:intergenic | 35.0% | |
| CATAATGTTGGGACTTATGT+GGG | + | chr5.1:51761279-51761298 | None:intergenic | 35.0% | |
| CCCAACATTGAATAAAAGAG+TGG | - | chr5.1:51760860-51760879 | MS.gene21285:intron | 35.0% | |
| CGACAAGTAAAAAGGAATCA+AGG | + | chr5.1:51759990-51760009 | None:intergenic | 35.0% | |
| CTAAACACTTGAGGTTCATT+TGG | - | chr5.1:51758326-51758345 | MS.gene21285:intron | 35.0% | |
| GAAAAGTCAGGGAAAGAAAA+TGG | + | chr5.1:51759485-51759504 | None:intergenic | 35.0% | |
| GAAGGATTCACTTATCAGTT+TGG | - | chr5.1:51760583-51760602 | MS.gene21285:intron | 35.0% | |
| GACAATTATTGTGAGATGGA+GGG | + | chr5.1:51758955-51758974 | None:intergenic | 35.0% | |
| GACAGATACTTTGGATGATA+TGG | - | chr5.1:51756385-51756404 | MS.gene21285:CDS | 35.0% | |
| GACTATAAAAGAAAACCTGC+AGG | - | chr5.1:51761895-51761914 | MS.gene21285:intron | 35.0% | |
| GATTCTCGTTCAGTTTGATA+AGG | - | chr5.1:51756445-51756464 | MS.gene21285:CDS | 35.0% | |
| GATTGACAGTTTCATGGATT+TGG | + | chr5.1:51761700-51761719 | None:intergenic | 35.0% | |
| GGATCTTAGGTCAAAAATTG+GGG | + | chr5.1:51761314-51761333 | None:intergenic | 35.0% | |
| GGGATCTTAGGTCAAAAATT+GGG | + | chr5.1:51761315-51761334 | None:intergenic | 35.0% | |
| GTGAACAATCTTAGAAAGAC+AGG | - | chr5.1:51760169-51760188 | MS.gene21285:intron | 35.0% | |
| GTTTAATGTTCGGCATGTAT+TGG | - | chr5.1:51760269-51760288 | MS.gene21285:intron | 35.0% | |
| GTTTGAGAGATAAGGGAAAA+AGG | - | chr5.1:51757893-51757912 | MS.gene21285:intron | 35.0% | |
| TAACATCTCTCCATTAAGTG+TGG | + | chr5.1:51761078-51761097 | None:intergenic | 35.0% | |
| TAAGAGCAAGGTTTCTATCA+AGG | - | chr5.1:51756758-51756777 | MS.gene21285:intron | 35.0% | |
| TAAGTGAATCCTTCTTTAGG+GGG | + | chr5.1:51760577-51760596 | None:intergenic | 35.0% | |
| TATGTATGAAGATGTCCCTA+TGG | + | chr5.1:51759528-51759547 | None:intergenic | 35.0% | |
| TCATAATGTTGGGACTTATG+TGG | + | chr5.1:51761280-51761299 | None:intergenic | 35.0% | |
| TGACAATTATTGTGAGATGG+AGG | + | chr5.1:51758956-51758975 | None:intergenic | 35.0% | |
| TGATGTCAATCTCATTTGTC+TGG | - | chr5.1:51761212-51761231 | MS.gene21285:intron | 35.0% | |
| TGCATACCTAACAAAACACT+AGG | - | chr5.1:51756638-51756657 | MS.gene21285:intron | 35.0% | |
| TGGAGTTAACCTGAATCTTT+GGG | - | chr5.1:51758882-51758901 | MS.gene21285:intron | 35.0% | |
| TGGGATCTTAGGTCAAAAAT+TGG | + | chr5.1:51761316-51761335 | None:intergenic | 35.0% | |
| TGTTGGACGTGTTAAAATTG+TGG | - | chr5.1:51759620-51759639 | MS.gene21285:intron | 35.0% | |
| TTGGATGATATGGTTCAGAA+TGG | - | chr5.1:51756395-51756414 | MS.gene21285:CDS | 35.0% | |
| TTTATAGTCAGTGTGGGTTT+AGG | + | chr5.1:51761884-51761903 | None:intergenic | 35.0% | |
| TTTCATGTTGCCAATGTGTT+TGG | - | chr5.1:51759323-51759342 | MS.gene21285:intron | 35.0% | |
| ! | AACATAAAAGAGGCGTGTTA+CGG | + | chr5.1:51758078-51758097 | None:intergenic | 35.0% |
| ! | AAGAGTGAGAAAGAGTATAG+TGG | + | chr5.1:51758478-51758497 | None:intergenic | 35.0% |
| ! | AATGTTATTTGAGTCACGAC+TGG | + | chr5.1:51762052-51762071 | None:intergenic | 35.0% |
| ! | ACAGATTTTGTGACAATGTC+TGG | - | chr5.1:51759547-51759566 | MS.gene21285:intron | 35.0% |
| ! | ACGGTGATATATGTTTTCTC+AGG | - | chr5.1:51757645-51757664 | MS.gene21285:intron | 35.0% |
| ! | AGGGTTGTTTGATGTTTTGT+TGG | - | chr5.1:51756891-51756910 | MS.gene21285:intron | 35.0% |
| ! | ATGAGTGGAGTGTTATGATT+TGG | - | chr5.1:51759190-51759209 | MS.gene21285:CDS | 35.0% |
| ! | ATTGATGAGTGGTTAAGTTG+CGG | + | chr5.1:51762192-51762211 | None:intergenic | 35.0% |
| ! | CAAAGCATCTTGTAAGATGA+AGG | + | chr5.1:51759574-51759593 | None:intergenic | 35.0% |
| ! | CATGTATTGGTACTAGTCTA+TGG | - | chr5.1:51760282-51760301 | MS.gene21285:intron | 35.0% |
| ! | CTGATGATGTAAACTGACAT+GGG | - | chr5.1:51760498-51760517 | MS.gene21285:intron | 35.0% |
| ! | GATTTTGTAGTCTATGACTG+AGG | - | chr5.1:51756719-51756738 | MS.gene21285:intron | 35.0% |
| ! | GTAATCTTTAGAGGTATGAC+AGG | + | chr5.1:51758754-51758773 | None:intergenic | 35.0% |
| ! | GTGGAATGATGGTTGTTATT+AGG | - | chr5.1:51756858-51756877 | MS.gene21285:intron | 35.0% |
| ! | TCTGATGATGTAAACTGACA+TGG | - | chr5.1:51760497-51760516 | MS.gene21285:intron | 35.0% |
| ! | TGATGATGTAAACTGACATG+GGG | - | chr5.1:51760499-51760518 | MS.gene21285:intron | 35.0% |
| ! | TGTTCTAAATGGAAGGGATT+GGG | + | chr5.1:51761858-51761877 | None:intergenic | 35.0% |
| ! | TTGTTCTAAATGGAAGGGAT+TGG | + | chr5.1:51761859-51761878 | None:intergenic | 35.0% |
| ! | TTTTACGAACGAATGGATGT+TGG | + | chr5.1:51762138-51762157 | None:intergenic | 35.0% |
| !! | AGGTGTTGTTCTAAATGGAA+GGG | + | chr5.1:51761864-51761883 | None:intergenic | 35.0% |
| !! | GGAGTAATGGATTAACTTTG+AGG | + | chr5.1:51759968-51759987 | None:intergenic | 35.0% |
| !! | GGTTTAGGTGTTGTTCTAAA+TGG | + | chr5.1:51761869-51761888 | None:intergenic | 35.0% |
| !! | GTGATTCTGGTTTAAGGATT+TGG | + | chr5.1:51762266-51762285 | None:intergenic | 35.0% |
| !! | TAGCTGAGCTTTGAATTTCT+AGG | - | chr5.1:51758802-51758821 | MS.gene21285:intron | 35.0% |
| !! | TAGGTGTTGTTCTAAATGGA+AGG | + | chr5.1:51761865-51761884 | None:intergenic | 35.0% |
| !! | TGACTTGGTTTGTGTGTTTA+TGG | + | chr5.1:51757310-51757329 | None:intergenic | 35.0% |
| !!! | ATCGCAACTTTTTGAAACAC+AGG | - | chr5.1:51760783-51760802 | MS.gene21285:intron | 35.0% |
| !!! | CGCAACTTTTTGAAACATAG+GGG | + | chr5.1:51760380-51760399 | None:intergenic | 35.0% |
| !!! | GACACTAGGATTTTGGTTTT+TGG | - | chr5.1:51756477-51756496 | MS.gene21285:CDS | 35.0% |
| !!! | GTTTGCAGATTTTTTTGCGA+TGG | + | chr5.1:51761992-51762011 | None:intergenic | 35.0% |
| !!! | TATTTTGACCCCCTAACTTT+TGG | + | chr5.1:51760740-51760759 | None:intergenic | 35.0% |
| !!! | TCGCAACTTTTTGAAACACA+GGG | - | chr5.1:51760784-51760803 | MS.gene21285:intron | 35.0% |
| AAAAGTGGGCCAAAAGTTAG+GGG | - | chr5.1:51760728-51760747 | MS.gene21285:intron | 40.0% | |
| AAAAGTGGGCCAAATGTTAG+GGG | + | chr5.1:51760436-51760455 | None:intergenic | 40.0% | |
| AAAGTTACACCATGCCAGTT+TGG | + | chr5.1:51760550-51760569 | None:intergenic | 40.0% | |
| AACTATTCTGTGGTCTGAGT+CGG | + | chr5.1:51758701-51758720 | None:intergenic | 40.0% | |
| AATATAATGAACCCAGCGTG+GGG | - | chr5.1:51757821-51757840 | MS.gene21285:intron | 40.0% | |
| AATTTGCGGTTGTACGAATC+CGG | + | chr5.1:51762161-51762180 | None:intergenic | 40.0% | |
| ACAGGGGGAGTAAATGTTAT+AGG | - | chr5.1:51760201-51760220 | MS.gene21285:intron | 40.0% | |
| ACAGTGCTTGACAGATACTT+TGG | - | chr5.1:51756376-51756395 | MS.gene21285:CDS | 40.0% | |
| ACCATCAGAGACTGAGAAAT+TGG | - | chr5.1:51760688-51760707 | MS.gene21285:intron | 40.0% | |
| ATCAAAACCCCCAAAGATTC+AGG | + | chr5.1:51758894-51758913 | None:intergenic | 40.0% | |
| ATGGAATTGGAGCGTGAAAT+TGG | + | chr5.1:51761973-51761992 | None:intergenic | 40.0% | |
| CAAAAGTGGGCCAAAAGTTA+GGG | - | chr5.1:51760727-51760746 | MS.gene21285:intron | 40.0% | |
| CAAAAGTGGGCCAAATGTTA+GGG | + | chr5.1:51760437-51760456 | None:intergenic | 40.0% | |
| CAGTTAAAAATTCGGCAGAG+AGG | - | chr5.1:51761376-51761395 | MS.gene21285:intron | 40.0% | |
| CATCCATTCGTTCGTAAAAC+CGG | - | chr5.1:51762139-51762158 | MS.gene21285:intron | 40.0% | |
| CATTGAAATCAACACACGGA+GGG | - | chr5.1:51759143-51759162 | MS.gene21285:CDS | 40.0% | |
| CTCCACTTATCATGTCAGTT+TGG | - | chr5.1:51760607-51760626 | MS.gene21285:intron | 40.0% | |
| CTCGTTCAGTTTGATAAGGT+TGG | - | chr5.1:51756449-51756468 | MS.gene21285:CDS | 40.0% | |
| CTGATAAATGGAGTCCAAAC+TGG | - | chr5.1:51760533-51760552 | MS.gene21285:intron | 40.0% | |
| CTTTATCGTAGATCGACGAT+CGG | - | chr5.1:51756353-51756372 | MS.gene21285:CDS | 40.0% | |
| GAAATTTATGGGTGAGGTTG+AGG | - | chr5.1:51757843-51757862 | MS.gene21285:intron | 40.0% | |
| GAAGACAAGCAAGAGAATGT+TGG | - | chr5.1:51759603-51759622 | MS.gene21285:intron | 40.0% | |
| GACAGGTAAAAAAGAACAGG+GGG | - | chr5.1:51760186-51760205 | MS.gene21285:intron | 40.0% | |
| GAGTTAACCTGAATCTTTGG+GGG | - | chr5.1:51758884-51758903 | MS.gene21285:intron | 40.0% | |
| GGAGTTAACCTGAATCTTTG+GGG | - | chr5.1:51758883-51758902 | MS.gene21285:intron | 40.0% | |
| GGATAAGTAGAGACTAACTG+TGG | - | chr5.1:51758523-51758542 | MS.gene21285:intron | 40.0% | |
| GGATTTGGCTGTTTGATTCA+CGG | + | chr5.1:51762251-51762270 | None:intergenic | 40.0% | |
| GTCCAAACTGACATGATAAG+TGG | + | chr5.1:51760612-51760631 | None:intergenic | 40.0% | |
| GTGGAAATGTCCGGTTAAAT+GGG | - | chr5.1:51758611-51758630 | MS.gene21285:intron | 40.0% | |
| TAATGTTGGGACTTATGTGG+GGG | + | chr5.1:51761277-51761296 | None:intergenic | 40.0% | |
| TATGATATCCCGGTTCTTGA+TGG | - | chr5.1:51761030-51761049 | MS.gene21285:intron | 40.0% | |
| TCAAAAGTGGGCCAAAAGTT+AGG | - | chr5.1:51760726-51760745 | MS.gene21285:intron | 40.0% | |
| TCAAAAGTGGGCCAAATGTT+AGG | + | chr5.1:51760438-51760457 | None:intergenic | 40.0% | |
| TCCTTAAACCAGAATCACGT+CGG | - | chr5.1:51762268-51762287 | MS.gene21285:intron | 40.0% | |
| TGGAATTGGAGCGTGAAATT+GGG | + | chr5.1:51761972-51761991 | None:intergenic | 40.0% | |
| TGGACACTCTTCCAATTACA+GGG | + | chr5.1:51757965-51757984 | None:intergenic | 40.0% | |
| TGTGGAAATGTCCGGTTAAA+TGG | - | chr5.1:51758610-51758629 | MS.gene21285:intron | 40.0% | |
| TGTTTATTGCATGTCTCGTG+TGG | - | chr5.1:51758548-51758567 | MS.gene21285:intron | 40.0% | |
| TTGGACACTCTTCCAATTAC+AGG | + | chr5.1:51757966-51757985 | None:intergenic | 40.0% | |
| ! | AAAGGATGGTAGTGAAACTG+TGG | - | chr5.1:51757582-51757601 | MS.gene21285:intron | 40.0% |
| ! | AACTGGCATGGTGTAACTTT+TGG | - | chr5.1:51760550-51760569 | MS.gene21285:intron | 40.0% |
| ! | AAGTGAATCCTTCTTTAGGG+GGG | + | chr5.1:51760576-51760595 | None:intergenic | 40.0% |
| ! | AATCCGGTTTTACGAACGAA+TGG | + | chr5.1:51762145-51762164 | None:intergenic | 40.0% |
| ! | ACATAAAAGAGGCGTGTTAC+GGG | + | chr5.1:51758077-51758096 | None:intergenic | 40.0% |
| ! | AGTAACAAGGTACTTGTGGA+TGG | + | chr5.1:51758291-51758310 | None:intergenic | 40.0% |
| ! | ATCTGAAATCGATCAGGGTT+AGG | + | chr5.1:51761352-51761371 | None:intergenic | 40.0% |
| ! | CTCTGGTTATGGGTTTTTGA+TGG | + | chr5.1:51762082-51762101 | None:intergenic | 40.0% |
| ! | GAATGGCCTTAATTTCTTGC+AGG | - | chr5.1:51759747-51759766 | MS.gene21285:intron | 40.0% |
| ! | GGTTTCAGACACTAGGATTT+TGG | - | chr5.1:51756470-51756489 | MS.gene21285:CDS | 40.0% |
| ! | TATAGCGCTCTAAACACTTG+AGG | - | chr5.1:51758317-51758336 | MS.gene21285:intron | 40.0% |
| !! | ACTTTTGGCCCACTTTTGAT+TGG | + | chr5.1:51760725-51760744 | None:intergenic | 40.0% |
| !! | CAAGTTTGTTTACTGGCTCA+TGG | + | chr5.1:51759903-51759922 | None:intergenic | 40.0% |
| !! | CTTTTCAAGCAATTCATGGC+CGG | + | chr5.1:51757107-51757126 | None:intergenic | 40.0% |
| !! | TAAGGTTGGTTTCAGACACT+AGG | - | chr5.1:51756463-51756482 | MS.gene21285:CDS | 40.0% |
| !! | TGGTCACCTAGTGTTTTGTT+AGG | + | chr5.1:51756647-51756666 | None:intergenic | 40.0% |
| !!! | CGCAACTTTTTGAAACACAG+GGG | - | chr5.1:51760785-51760804 | MS.gene21285:intron | 40.0% |
| !!! | GCAACTTTTTGAAACACAGG+GGG | - | chr5.1:51760786-51760805 | MS.gene21285:intron | 40.0% |
| !!! | GTGACTATTGTTTTGAGGCA+AGG | + | chr5.1:51758993-51759012 | None:intergenic | 40.0% |
| !!! | TGTTTTGACCCCCTAACATT+TGG | - | chr5.1:51760424-51760443 | MS.gene21285:intron | 40.0% |
| AAACCTGCAGGACACAATGA+AGG | - | chr5.1:51761907-51761926 | MS.gene21285:intron | 45.0% | |
| AAAGTGGGCCAAAAGTTAGG+GGG | - | chr5.1:51760729-51760748 | MS.gene21285:intron | 45.0% | |
| AAAGTGGGCCAAATGTTAGG+GGG | + | chr5.1:51760435-51760454 | None:intergenic | 45.0% | |
| AAATGGAGTCCAAACTGGCA+TGG | - | chr5.1:51760538-51760557 | MS.gene21285:intron | 45.0% | |
| AACCGTGTTAACTCCCCAAA+AGG | - | chr5.1:51760996-51761015 | MS.gene21285:intron | 45.0% | |
| AACCTGCAGGACACAATGAA+GGG | - | chr5.1:51761908-51761927 | MS.gene21285:intron | 45.0% | |
| ACAAGAGCTGCCAAACACAT+TGG | + | chr5.1:51759336-51759355 | None:intergenic | 45.0% | |
| ACACTTGAGGTTCATTTGGC+TGG | - | chr5.1:51758330-51758349 | MS.gene21285:intron | 45.0% | |
| ACAGGCGTGTGAAAGTTGTT+TGG | + | chr5.1:51761755-51761774 | None:intergenic | 45.0% | |
| ACGTCGAACACCAATTCAAC+CGG | - | chr5.1:51762396-51762415 | MS.gene21285:CDS | 45.0% | |
| ACTGATGTGGGTTTGTGTGT+CGG | + | chr5.1:51762319-51762338 | None:intergenic | 45.0% | |
| ATCACAGTACCAGCAGATGA+TGG | + | chr5.1:51759710-51759729 | None:intergenic | 45.0% | |
| ATCATCTGCTGGTACTGTGA+TGG | - | chr5.1:51759709-51759728 | MS.gene21285:intron | 45.0% | |
| ATGGAGAGTCCCACACTTAA+TGG | - | chr5.1:51761065-51761084 | MS.gene21285:intron | 45.0% | |
| ATTGGAGCGTGAAATTGGGT+TGG | + | chr5.1:51761968-51761987 | None:intergenic | 45.0% | |
| CATAAACCTACAACCAGGGA+AGG | + | chr5.1:51757419-51757438 | None:intergenic | 45.0% | |
| CCAACACTGGTATGATATCC+CGG | - | chr5.1:51761020-51761039 | MS.gene21285:intron | 45.0% | |
| CCATTGAAATCAACACACGG+AGG | - | chr5.1:51759142-51759161 | MS.gene21285:CDS | 45.0% | |
| CCTGACTCAGTCAACATATG+AGG | + | chr5.1:51761414-51761433 | None:intergenic | 45.0% | |
| CGGGATATCATACCAGTGTT+GGG | + | chr5.1:51761022-51761041 | None:intergenic | 45.0% | |
| CGTGTGGAATATGACAACTG+TGG | - | chr5.1:51758564-51758583 | MS.gene21285:intron | 45.0% | |
| CTACAACAGGTTTCCAGGAA+CGG | - | chr5.1:51761811-51761830 | MS.gene21285:intron | 45.0% | |
| CTCATCTACAACAGGTTTCC+AGG | - | chr5.1:51761806-51761825 | MS.gene21285:intron | 45.0% | |
| CTGATTTCGAAAACGAGCTC+TGG | + | chr5.1:51762099-51762118 | None:intergenic | 45.0% | |
| CTGGAAACCTGTTGTAGATG+AGG | + | chr5.1:51761808-51761827 | None:intergenic | 45.0% | |
| CTGTTGTAGATGAGGCTGAA+AGG | + | chr5.1:51761800-51761819 | None:intergenic | 45.0% | |
| CTTTCAGCCTCATCTACAAC+AGG | - | chr5.1:51761798-51761817 | MS.gene21285:intron | 45.0% | |
| GAGATGCTTCGATTGATGAG+TGG | + | chr5.1:51762203-51762222 | None:intergenic | 45.0% | |
| GATAGAAGGATGCTGATGAG+TGG | + | chr5.1:51760653-51760672 | None:intergenic | 45.0% | |
| GCATGTGACTCAAAGTTGCT+TGG | - | chr5.1:51759642-51759661 | MS.gene21285:intron | 45.0% | |
| GCCAATTTCTCAGTCTCTGA+TGG | + | chr5.1:51760692-51760711 | None:intergenic | 45.0% | |
| GGAGACGAAAGTTAAGAGCA+AGG | - | chr5.1:51756746-51756765 | MS.gene21285:intron | 45.0% | |
| GGCTAGACCATAGTGATGAA+TGG | - | chr5.1:51759730-51759749 | MS.gene21285:intron | 45.0% | |
| TAAAAGGCCTTCCATCTCCA+TGG | - | chr5.1:51759799-51759818 | MS.gene21285:intron | 45.0% | |
| TAAACTGGCATGGGGATAGA+AGG | + | chr5.1:51760667-51760686 | None:intergenic | 45.0% | |
| TAGTTTCCTTCCCTGGTTGT+AGG | - | chr5.1:51757410-51757429 | MS.gene21285:intron | 45.0% | |
| TCTAATGCCATGGAGATGGA+AGG | + | chr5.1:51759809-51759828 | None:intergenic | 45.0% | |
| TGAGGTTGAGGGATTATTGG+TGG | - | chr5.1:51757855-51757874 | MS.gene21285:intron | 45.0% | |
| TGTGAGTCGTCGAAGTTTGT+GGG | + | chr5.1:51762360-51762379 | None:intergenic | 45.0% | |
| TGTTTGGATTGAGACTGGAC+TGG | + | chr5.1:51761739-51761758 | None:intergenic | 45.0% | |
| TTGATTCACGGCTTGTGTTG+TGG | + | chr5.1:51762239-51762258 | None:intergenic | 45.0% | |
| TTGTGAGTCGTCGAAGTTTG+TGG | + | chr5.1:51762361-51762380 | None:intergenic | 45.0% | |
| ! | ACCAAGCTGCAAGCAAGTTT+TGG | - | chr5.1:51757383-51757402 | MS.gene21285:intron | 45.0% |
| ! | ATGAGTGGTTAAGTTGCGGT+TGG | + | chr5.1:51762188-51762207 | None:intergenic | 45.0% |
| ! | CAGTCTCTGATGGTGTAAAC+TGG | + | chr5.1:51760682-51760701 | None:intergenic | 45.0% |
| ! | CCTCATATGTTGACTGAGTC+AGG | - | chr5.1:51761411-51761430 | MS.gene21285:intron | 45.0% |
| ! | CGAAAACGAGCTCTGGTTAT+GGG | + | chr5.1:51762092-51762111 | None:intergenic | 45.0% |
| ! | CTGATGGTGTAAACTGGCAT+GGG | + | chr5.1:51760676-51760695 | None:intergenic | 45.0% |
| ! | GATTGAGACTGGACTGGATT+TGG | + | chr5.1:51761733-51761752 | None:intergenic | 45.0% |
| ! | GGGACGAGATAACGTGTTTT+AGG | + | chr5.1:51757173-51757192 | None:intergenic | 45.0% |
| ! | TCCAAAACTTGCTTGCAGCT+TGG | + | chr5.1:51757387-51757406 | None:intergenic | 45.0% |
| ! | TCGAAAACGAGCTCTGGTTA+TGG | + | chr5.1:51762093-51762112 | None:intergenic | 45.0% |
| ! | TCTGATGGTGTAAACTGGCA+TGG | + | chr5.1:51760677-51760696 | None:intergenic | 45.0% |
| ! | TGATGGTGTAAACTGGCATG+GGG | + | chr5.1:51760675-51760694 | None:intergenic | 45.0% |
| !! | AAGAGTGTCCAAGAGAGAGT+GGG | - | chr5.1:51757974-51757993 | MS.gene21285:intron | 45.0% |
| !! | ATACCAGTGTTGGGCCTTTT+GGG | + | chr5.1:51761013-51761032 | None:intergenic | 45.0% |
| !! | CCTCCGTGTGTTGATTTCAA+TGG | + | chr5.1:51759145-51759164 | None:intergenic | 45.0% |
| !! | GTGAAATTGGGTTGGATCGT+AGG | + | chr5.1:51761960-51761979 | None:intergenic | 45.0% |
| !! | GTTTGTGTGTCGGTTTGGTT+CGG | + | chr5.1:51762309-51762328 | None:intergenic | 45.0% |
| !! | TCCGACGTGATTCTGGTTTA+AGG | + | chr5.1:51762272-51762291 | None:intergenic | 45.0% |
| !! | TTGCGGTTGGTGACAATTTG+CGG | + | chr5.1:51762175-51762194 | None:intergenic | 45.0% |
| !! | ATAAATCATATATATATATA+TGG | + | chr5.1:51759398-51759417 | None:intergenic | 5.0% |
| !! | ATAATAAAATACAAAAATAA+AGG | + | chr5.1:51761554-51761573 | None:intergenic | 5.0% |
| ACACGTGTCAGTGGGATCTT+AGG | + | chr5.1:51761327-51761346 | None:intergenic | 50.0% | |
| ACCCAGCGTGGGGAAATTTA+TGG | - | chr5.1:51757831-51757850 | MS.gene21285:intron | 50.0% | |
| ACCCATAAATTTCCCCACGC+TGG | + | chr5.1:51757836-51757855 | None:intergenic | 50.0% | |
| ACCTGCAGGACACAATGAAG+GGG | - | chr5.1:51761909-51761928 | MS.gene21285:intron | 50.0% | |
| ACGAAATTCTAGCCCGTGCT+TGG | + | chr5.1:51760315-51760334 | None:intergenic | 50.0% | |
| AGGTTCATTTGGCTGGTGTG+TGG | - | chr5.1:51758337-51758356 | MS.gene21285:intron | 50.0% | |
| ATACGAAACACAACCGCGAC+AGG | + | chr5.1:51761773-51761792 | None:intergenic | 50.0% | |
| ATCGCTTTCCCACTCTCTCT+TGG | + | chr5.1:51757985-51758004 | None:intergenic | 50.0% | |
| ATGACGGTTTGCGACTGATG+TGG | + | chr5.1:51762332-51762351 | None:intergenic | 50.0% | |
| ATTCCAACCTCTCCTTGCTC+CGG | - | chr5.1:51757085-51757104 | MS.gene21285:intron | 50.0% | |
| CACGGCTTGTGTTGTGGATT+AGG | + | chr5.1:51762233-51762252 | None:intergenic | 50.0% | |
| CCCAGCGTGGGGAAATTTAT+GGG | - | chr5.1:51757832-51757851 | MS.gene21285:intron | 50.0% | |
| CCCATAAATTTCCCCACGCT+GGG | + | chr5.1:51757835-51757854 | None:intergenic | 50.0% | |
| CCGGGATATCATACCAGTGT+TGG | + | chr5.1:51761023-51761042 | None:intergenic | 50.0% | |
| CGTGATCCACCATCAAGAAC+CGG | + | chr5.1:51761042-51761061 | None:intergenic | 50.0% | |
| CGTGGGGAAATTTATGGGTG+AGG | - | chr5.1:51757837-51757856 | MS.gene21285:intron | 50.0% | |
| GATATCCCGGTTCTTGATGG+TGG | - | chr5.1:51761033-51761052 | MS.gene21285:intron | 50.0% | |
| GGGTGAGGTTGAGGGATTAT+TGG | - | chr5.1:51757852-51757871 | MS.gene21285:intron | 50.0% | |
| GGTGACAGATCCGGTTGAAT+TGG | + | chr5.1:51762409-51762428 | None:intergenic | 50.0% | |
| GGTTGAGGGATTATTGGTGG+CGG | - | chr5.1:51757858-51757877 | MS.gene21285:intron | 50.0% | |
| GTAGTCTATGACTGAGGCTC+TGG | - | chr5.1:51756725-51756744 | MS.gene21285:intron | 50.0% | |
| GTCTATGAAAGTGGGTGACG+TGG | - | chr5.1:51757939-51757958 | MS.gene21285:intron | 50.0% | |
| GTGATCCACCATCAAGAACC+GGG | + | chr5.1:51761041-51761060 | None:intergenic | 50.0% | |
| TGACGGTTTGCGACTGATGT+GGG | + | chr5.1:51762331-51762350 | None:intergenic | 50.0% | |
| TGGAGCATAGTTTCCTTCCC+TGG | - | chr5.1:51757403-51757422 | MS.gene21285:intron | 50.0% | |
| TTGGGGAGTTAACACGGTTG+TGG | + | chr5.1:51760995-51761014 | None:intergenic | 50.0% | |
| ! | AAGTTTGTGGGCTGCGATGA+CGG | + | chr5.1:51762348-51762367 | None:intergenic | 50.0% |
| ! | ACGGTTGAGTTTTGCTGCTG+CGG | + | chr5.1:51762431-51762450 | None:intergenic | 50.0% |
| ! | ACTTTTGGCCCCCCTAAAGA+AGG | - | chr5.1:51760565-51760584 | MS.gene21285:intron | 50.0% |
| ! | TGAATTGGTGTTCGACGTCG+CGG | + | chr5.1:51762394-51762413 | None:intergenic | 50.0% |
| !! | CATACCAGTGTTGGGCCTTT+TGG | + | chr5.1:51761014-51761033 | None:intergenic | 50.0% |
| !! | CGTATGCTCTTAAGCGCTGA+GGG | + | chr5.1:51757025-51757044 | None:intergenic | 50.0% |
| !! | GAAGAGTGTCCAAGAGAGAG+TGG | - | chr5.1:51757973-51757992 | MS.gene21285:intron | 50.0% |
| !! | GGCCTTTTGGGGAGTTAACA+CGG | + | chr5.1:51761001-51761020 | None:intergenic | 50.0% |
| !! | GGTTTGGTTCGGATGTGCTT+CGG | + | chr5.1:51762298-51762317 | None:intergenic | 50.0% |
| !! | TACCAGTGTTGGGCCTTTTG+GGG | + | chr5.1:51761012-51761031 | None:intergenic | 50.0% |
| !! | TGTGGGTTTGTGTGTCGGTT+TGG | + | chr5.1:51762314-51762333 | None:intergenic | 50.0% |
| !! | TTGATGGTGGATCACGCACA+TGG | - | chr5.1:51761046-51761065 | MS.gene21285:intron | 50.0% |
| AGCAATTCATGGCCGGAGCA+AGG | + | chr5.1:51757100-51757119 | None:intergenic | 55.0% | |
| ATTCTAGCCCGTGCTTGGCA+CGG | + | chr5.1:51760310-51760329 | None:intergenic | 55.0% | |
| CAACTTTCACACGCCTGTCG+CGG | - | chr5.1:51761757-51761776 | MS.gene21285:intron | 55.0% | |
| CCTGCAGGACACAATGAAGG+GGG | - | chr5.1:51761910-51761929 | MS.gene21285:intron | 55.0% | |
| CTGCAGGACACAATGAAGGG+GGG | - | chr5.1:51761911-51761930 | MS.gene21285:intron | 55.0% | |
| GAGTGTGTGAAAGCCGTTCC+TGG | + | chr5.1:51761827-51761846 | None:intergenic | 55.0% | |
| GTTAGGCGACACGTGTCAGT+GGG | + | chr5.1:51761335-51761354 | None:intergenic | 55.0% | |
| TCGGTCTTCCGACGTGATTC+TGG | + | chr5.1:51762279-51762298 | None:intergenic | 55.0% | |
| ! | AAAGAGGCGTGTTACGGGAG+AGG | + | chr5.1:51758072-51758091 | None:intergenic | 55.0% |
| ! | AAGAGGCGTGTTACGGGAGA+GGG | + | chr5.1:51758071-51758090 | None:intergenic | 55.0% |
| ! | CGGTTGAGTTTTGCTGCTGC+GGG | + | chr5.1:51762430-51762449 | None:intergenic | 55.0% |
| ! | GCGTATGCTCTTAAGCGCTG+AGG | + | chr5.1:51757026-51757045 | None:intergenic | 55.0% |
| !! | GGAGCATTGCCATCATCTGC+TGG | - | chr5.1:51759698-51759717 | MS.gene21285:intron | 55.0% |
| !! | TGAGGGATTATTGGTGGCGG+TGG | - | chr5.1:51757861-51757880 | MS.gene21285:intron | 55.0% |
| CCCCCTTCATTGTGTCCTGC+AGG | + | chr5.1:51761913-51761932 | None:intergenic | 60.0% | |
| CTATGGACCCGTGCCAAGCA+CGG | - | chr5.1:51760299-51760318 | MS.gene21285:intron | 60.0% | |
| CTCCCCAAAAGGCCCAACAC+TGG | - | chr5.1:51761007-51761026 | MS.gene21285:intron | 60.0% | |
| GGGTGACGTGGCCCTGTAAT+TGG | - | chr5.1:51757951-51757970 | MS.gene21285:intron | 60.0% | |
| GGTTAGGCGACACGTGTCAG+TGG | + | chr5.1:51761336-51761355 | None:intergenic | 60.0% | |
| TATGGACCCGTGCCAAGCAC+GGG | - | chr5.1:51760300-51760319 | MS.gene21285:intron | 60.0% | |
| TGTTCGACGTCGCGGTTCGT+CGG | + | chr5.1:51762386-51762405 | None:intergenic | 60.0% | |
| TTCATGGCCGGAGCAAGGAG+AGG | + | chr5.1:51757095-51757114 | None:intergenic | 60.0% | |
| TTCTAGCCCGTGCTTGGCAC+GGG | + | chr5.1:51760309-51760328 | None:intergenic | 60.0% | |
| GCTGCTGCGGGTGACAGATC+CGG | + | chr5.1:51762418-51762437 | None:intergenic | 65.0% | |
| TGGCCGGAGCAAGGAGAGGT+TGG | + | chr5.1:51757091-51757110 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 51756338 | 51762456 | 51756338 | ID=MS.gene21285 |
| chr5.1 | mRNA | 51756338 | 51762456 | 51756338 | ID=MS.gene21285.t1;Parent=MS.gene21285 |
| chr5.1 | exon | 51762328 | 51762456 | 51762328 | ID=MS.gene21285.t1.exon1;Parent=MS.gene21285.t1 |
| chr5.1 | CDS | 51762328 | 51762456 | 51762328 | ID=cds.MS.gene21285.t1;Parent=MS.gene21285.t1 |
| chr5.1 | exon | 51762015 | 51762065 | 51762015 | ID=MS.gene21285.t1.exon2;Parent=MS.gene21285.t1 |
| chr5.1 | CDS | 51762015 | 51762065 | 51762015 | ID=cds.MS.gene21285.t1;Parent=MS.gene21285.t1 |
| chr5.1 | exon | 51759131 | 51759263 | 51759131 | ID=MS.gene21285.t1.exon3;Parent=MS.gene21285.t1 |
| chr5.1 | CDS | 51759131 | 51759263 | 51759131 | ID=cds.MS.gene21285.t1;Parent=MS.gene21285.t1 |
| chr5.1 | exon | 51756338 | 51756531 | 51756338 | ID=MS.gene21285.t1.exon4;Parent=MS.gene21285.t1 |
| chr5.1 | CDS | 51756338 | 51756531 | 51756338 | ID=cds.MS.gene21285.t1;Parent=MS.gene21285.t1 |
| Gene Sequence |
| Protein sequence |
