Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053340.t1 | XP_024641268.1 | 95.6 | 270 | 12 | 0 | 1 | 270 | 1 | 270 | 1.20E-145 | 525.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053340.t1 | Q9LW60 | 43.5 | 278 | 129 | 7 | 1 | 269 | 1 | 259 | 1.9e-51 | 204.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053340.t1 | A0A072VHH4 | 94.2 | 274 | 12 | 1 | 1 | 270 | 1 | 274 | 4.7e-144 | 520.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene053340 | -0.802982 | 4.33E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene053340 | 0.813643 | 2.31E-51 | -1.69E-46 |
| MS.gene053045 | MS.gene053340 | 0.805047 | 1.61E-49 | -1.69E-46 |
| MS.gene053094 | MS.gene053340 | 0.821316 | 4.31E-53 | -1.69E-46 |
| MS.gene053298 | MS.gene053340 | 0.827719 | 1.34E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene053963 | 0.826509 | 2.61E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene054222 | 0.810534 | 1.10E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene05469 | 0.854469 | 1.21E-61 | -1.69E-46 |
| MS.gene053340 | MS.gene055603 | 0.81678 | 4.63E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene056068 | 0.809429 | 1.90E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene056986 | 0.806994 | 6.28E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene05985 | -0.809528 | 1.81E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene059872 | -0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene060879 | 0.812836 | 3.47E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene06166 | 0.812052 | 5.15E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene063245 | 0.90398 | 1.98E-79 | -1.69E-46 |
| MS.gene053340 | MS.gene063247 | 0.90475 | 8.85E-80 | -1.69E-46 |
| MS.gene053340 | MS.gene064845 | 0.824061 | 9.90E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene064846 | 0.81794 | 2.54E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene065072 | 0.809448 | 1.88E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene065085 | 0.813432 | 2.57E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene065460 | 0.820946 | 5.24E-53 | -1.69E-46 |
| MS.gene053340 | MS.gene066272 | 0.811011 | 8.67E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene066513 | 0.831743 | 1.40E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene067981 | 0.801025 | 1.09E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene068565 | 0.817738 | 2.82E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene069827 | 0.809648 | 1.71E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene070011 | 0.809072 | 2.27E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene070954 | -0.809387 | 1.94E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene071975 | 0.801012 | 1.10E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene071985 | 0.800451 | 1.43E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene072092 | -0.824206 | 9.15E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene072970 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene073028 | 0.841358 | 4.99E-58 | -1.69E-46 |
| MS.gene053340 | MS.gene073334 | 0.806136 | 9.52E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene073670 | 0.801162 | 1.03E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene074045 | 0.8098 | 1.58E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene074100 | 0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene08582 | 0.811903 | 5.55E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene09166 | 0.810457 | 1.14E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene20430 | 0.835666 | 1.47E-56 | -1.69E-46 |
| MS.gene053340 | MS.gene20600 | 0.804367 | 2.23E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene20707 | -0.8274 | 1.60E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene21285 | 0.801118 | 1.05E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene22992 | -0.815757 | 7.85E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene23152 | -0.816543 | 5.24E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene23153 | -0.802046 | 6.76E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene23464 | 0.804391 | 2.21E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene23491 | 0.808288 | 3.33E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene24285 | 0.824993 | 5.97E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene26958 | 0.827737 | 1.33E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene27134 | 0.82341 | 1.41E-53 | -1.69E-46 |
| MS.gene053340 | MS.gene27228 | 0.813782 | 2.15E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene27318 | 0.827726 | 1.33E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene27516 | 0.806026 | 1.00E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene28491 | 0.813666 | 2.28E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene28869 | 0.80179 | 7.62E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene31856 | 0.806114 | 9.63E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene32801 | 0.828622 | 8.11E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene33420 | 0.810966 | 8.86E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene33651 | 0.84002 | 1.12E-57 | -1.69E-46 |
| MS.gene053340 | MS.gene33935 | -0.83789 | 3.98E-57 | -1.69E-46 |
| MS.gene053340 | MS.gene34115 | 0.809229 | 2.10E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene34340 | 0.822174 | 2.73E-53 | -1.69E-46 |
| MS.gene053340 | MS.gene34444 | 0.852809 | 3.62E-61 | -1.69E-46 |
| MS.gene053340 | MS.gene36229 | 0.813117 | 3.01E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene36231 | 0.813177 | 2.92E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene36625 | 0.821531 | 3.84E-53 | -1.69E-46 |
| MS.gene053340 | MS.gene37412 | 0.827617 | 1.42E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene39376 | -0.810134 | 1.34E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene39695 | -0.821742 | 3.43E-53 | -1.69E-46 |
| MS.gene053340 | MS.gene40608 | 0.825963 | 3.52E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene40908 | 0.810776 | 9.74E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene41119 | 0.800263 | 1.56E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene41383 | 0.811104 | 8.27E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene43215 | -0.807452 | 5.02E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene46390 | 0.800937 | 1.14E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene47195 | 0.807226 | 5.60E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene47826 | 0.808837 | 2.54E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene51557 | 0.802834 | 4.65E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene52808 | 0.808677 | 2.75E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene54090 | 0.814101 | 1.83E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene55063 | 0.802147 | 6.44E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene55545 | 0.815075 | 1.11E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene56285 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene57128 | 0.819491 | 1.13E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene58467 | 0.856289 | 3.56E-62 | -1.69E-46 |
| MS.gene053340 | MS.gene59417 | 0.807195 | 5.69E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene59540 | 0.82929 | 5.59E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene60120 | 0.806438 | 8.23E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene60384 | 0.81531 | 9.87E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene60781 | -0.831699 | 1.44E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene60871 | 0.823936 | 1.06E-53 | -1.69E-46 |
| MS.gene053340 | MS.gene61254 | 0.800313 | 1.53E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene61257 | 0.818445 | 1.95E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene61288 | 0.816364 | 5.74E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene62676 | 0.812907 | 3.35E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene62677 | 0.811277 | 7.59E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene62887 | -0.817038 | 4.06E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene65294 | 0.807845 | 4.14E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene65295 | 0.810204 | 1.29E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene65444 | 0.885633 | 6.87E-72 | -1.69E-46 |
| MS.gene053340 | MS.gene66408 | 0.814216 | 1.72E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene66476 | 0.821602 | 3.70E-53 | -1.69E-46 |
| MS.gene053340 | MS.gene66979 | 0.817665 | 2.93E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene67179 | 0.997062 | 2.65E-236 | -1.69E-46 |
| MS.gene053340 | MS.gene67248 | 0.811148 | 8.09E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene68119 | 0.828595 | 8.24E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene69821 | 0.837091 | 6.38E-57 | -1.69E-46 |
| MS.gene053340 | MS.gene70277 | 0.803643 | 3.16E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene71879 | 0.809274 | 2.05E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene72376 | 0.817055 | 4.02E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene72620 | 0.810553 | 1.09E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene72621 | 0.841114 | 5.78E-58 | -1.69E-46 |
| MS.gene053340 | MS.gene72748 | 0.82175 | 3.42E-53 | -1.69E-46 |
| MS.gene053340 | MS.gene74082 | 0.803515 | 3.36E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene74530 | 0.801654 | 8.13E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene74938 | 0.803726 | 3.04E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene74956 | 0.809378 | 1.95E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene75062 | 0.800628 | 1.32E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene76248 | 0.811519 | 6.72E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene77208 | 0.802607 | 5.18E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene77412 | 0.817992 | 2.47E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene77971 | -0.809512 | 1.82E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene78773 | 0.801624 | 8.25E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene79599 | -0.806846 | 6.75E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene81590 | 0.832297 | 1.02E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene81831 | 0.841941 | 3.50E-58 | -1.69E-46 |
| MS.gene053340 | MS.gene82269 | 0.836768 | 7.71E-57 | -1.69E-46 |
| MS.gene053340 | MS.gene82354 | 0.805178 | 1.51E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene83687 | 0.804026 | 2.63E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene85627 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene85979 | 0.810796 | 9.65E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene87673 | 0.813543 | 2.43E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene87969 | 0.817901 | 2.59E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene88351 | 0.830904 | 2.26E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene88831 | -0.813205 | 2.88E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene89049 | 0.831921 | 1.27E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene91006 | 0.803149 | 4.00E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene91204 | 0.819108 | 1.38E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene92320 | 0.801993 | 6.93E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene92775 | 0.829233 | 5.77E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene93155 | 0.800387 | 1.48E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene93288 | -0.818557 | 1.84E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene93983 | 0.818642 | 1.76E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene93985 | 0.846491 | 2.10E-59 | -1.69E-46 |
| MS.gene053340 | MS.gene94906 | 0.806017 | 1.01E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene95556 | -0.826399 | 2.77E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene95655 | 0.803461 | 3.45E-49 | -1.69E-46 |
| MS.gene053340 | MS.gene96973 | 0.814332 | 1.63E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene98852 | 0.827522 | 1.49E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene99200 | 0.806377 | 8.47E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene99465 | 0.800293 | 1.54E-48 | -1.69E-46 |
| MS.gene053340 | MS.gene99483 | 0.812556 | 3.99E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene99724 | 0.829032 | 6.46E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene99848 | 0.827275 | 1.71E-54 | -1.69E-46 |
| MS.gene053340 | MS.gene99849 | 0.814018 | 1.91E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene99894 | 0.804378 | 2.22E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053340.t1 | MTR_1g041475 | 94.161 | 274 | 12 | 1 | 1 | 270 | 1 | 274 | 0.0 | 531 |
| MS.gene053340.t1 | MTR_1g075730 | 60.219 | 274 | 105 | 1 | 1 | 270 | 1 | 274 | 5.17e-117 | 337 |
| MS.gene053340.t1 | MTR_1g075730 | 58.993 | 278 | 106 | 1 | 1 | 270 | 1 | 278 | 1.14e-115 | 333 |
| MS.gene053340.t1 | MTR_8g463130 | 35.938 | 256 | 130 | 5 | 41 | 269 | 5 | 253 | 7.02e-36 | 129 |
| MS.gene053340.t1 | MTR_8g463130 | 35.938 | 256 | 130 | 5 | 41 | 269 | 33 | 281 | 1.01e-35 | 129 |
| MS.gene053340.t1 | MTR_2g008850 | 33.333 | 267 | 144 | 5 | 30 | 269 | 21 | 280 | 2.67e-31 | 117 |
| MS.gene053340.t1 | MTR_2g078760 | 35.798 | 257 | 129 | 6 | 41 | 269 | 5 | 253 | 7.82e-31 | 115 |
| MS.gene053340.t1 | MTR_4g094208 | 31.071 | 280 | 159 | 5 | 17 | 269 | 4 | 276 | 1.04e-30 | 115 |
| MS.gene053340.t1 | MTR_2g078760 | 35.798 | 257 | 129 | 6 | 41 | 269 | 84 | 332 | 2.67e-30 | 116 |
| MS.gene053340.t1 | MTR_2g008850 | 34.513 | 226 | 119 | 4 | 71 | 269 | 11 | 234 | 7.02e-30 | 112 |
| MS.gene053340.t1 | MTR_5g063940 | 34.361 | 227 | 118 | 5 | 71 | 269 | 11 | 234 | 1.05e-29 | 112 |
| MS.gene053340.t1 | MTR_5g063940 | 34.361 | 227 | 118 | 5 | 71 | 269 | 58 | 281 | 7.53e-29 | 111 |
| MS.gene053340.t1 | MTR_7g083300 | 69.880 | 83 | 19 | 3 | 79 | 159 | 14 | 92 | 1.98e-28 | 104 |
| MS.gene053340.t1 | MTR_3g074610 | 32.159 | 227 | 123 | 5 | 71 | 269 | 58 | 281 | 4.40e-25 | 101 |
| MS.gene053340.t1 | MTR_1g014640 | 30.233 | 215 | 125 | 5 | 80 | 269 | 109 | 323 | 1.25e-23 | 98.2 |
| MS.gene053340.t1 | MTR_1g013400 | 30.233 | 215 | 125 | 5 | 80 | 269 | 109 | 323 | 1.25e-23 | 98.2 |
| MS.gene053340.t1 | MTR_4g094542 | 30.859 | 256 | 142 | 5 | 41 | 269 | 117 | 364 | 3.08e-23 | 97.4 |
| MS.gene053340.t1 | MTR_3g105730 | 29.767 | 215 | 126 | 5 | 80 | 269 | 44 | 258 | 1.45e-22 | 94.4 |
| MS.gene053340.t1 | MTR_3g105730 | 29.767 | 215 | 126 | 5 | 80 | 269 | 66 | 280 | 1.51e-22 | 94.7 |
| MS.gene053340.t1 | MTR_2g078760 | 33.803 | 213 | 107 | 5 | 41 | 226 | 84 | 289 | 2.51e-18 | 82.8 |
| MS.gene053340.t1 | MTR_1g115570 | 28.111 | 217 | 127 | 8 | 79 | 270 | 126 | 338 | 1.60e-16 | 78.6 |
| MS.gene053340.t1 | MTR_2g078760 | 40.741 | 135 | 71 | 3 | 41 | 173 | 84 | 211 | 5.60e-16 | 75.9 |
| MS.gene053340.t1 | MTR_5g024340 | 24.498 | 249 | 148 | 7 | 59 | 269 | 99 | 345 | 2.87e-13 | 69.3 |
| MS.gene053340.t1 | MTR_3g091060 | 25.974 | 231 | 142 | 5 | 67 | 270 | 113 | 341 | 3.74e-13 | 68.9 |
| MS.gene053340.t1 | MTR_5g071550 | 26.068 | 234 | 129 | 8 | 73 | 269 | 148 | 374 | 1.87e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053340.t1 | AT3G23360 | 43.011 | 279 | 129 | 7 | 1 | 269 | 1 | 259 | 3.49e-68 | 212 |
| MS.gene053340.t1 | AT4G28400 | 34.701 | 268 | 138 | 7 | 30 | 269 | 2 | 260 | 1.85e-35 | 128 |
| MS.gene053340.t1 | AT4G28400 | 35.019 | 257 | 131 | 6 | 41 | 269 | 34 | 282 | 3.50e-35 | 127 |
| MS.gene053340.t1 | AT2G20630 | 33.852 | 257 | 134 | 6 | 41 | 269 | 30 | 278 | 6.83e-35 | 127 |
| MS.gene053340.t1 | AT2G20630 | 33.463 | 257 | 135 | 6 | 41 | 269 | 30 | 278 | 2.12e-32 | 120 |
| MS.gene053340.t1 | AT3G15260 | 32.374 | 278 | 151 | 7 | 20 | 269 | 20 | 288 | 3.96e-31 | 117 |
| MS.gene053340.t1 | AT3G15260 | 32.374 | 278 | 151 | 7 | 20 | 269 | 20 | 288 | 3.96e-31 | 117 |
| MS.gene053340.t1 | AT1G22280 | 33.333 | 225 | 121 | 4 | 72 | 269 | 58 | 280 | 7.28e-28 | 108 |
| MS.gene053340.t1 | AT1G78200 | 33.628 | 226 | 116 | 6 | 75 | 269 | 15 | 237 | 3.58e-27 | 105 |
| MS.gene053340.t1 | AT1G78200 | 33.628 | 226 | 116 | 6 | 75 | 269 | 15 | 237 | 3.58e-27 | 105 |
| MS.gene053340.t1 | AT1G22280 | 32.900 | 231 | 120 | 5 | 72 | 269 | 58 | 286 | 4.10e-27 | 106 |
| MS.gene053340.t1 | AT1G78200 | 32.932 | 249 | 133 | 6 | 52 | 269 | 37 | 282 | 4.92e-27 | 106 |
| MS.gene053340.t1 | AT1G78200 | 32.932 | 249 | 133 | 6 | 52 | 269 | 37 | 282 | 4.92e-27 | 106 |
| MS.gene053340.t1 | AT1G78200 | 32.932 | 249 | 133 | 6 | 52 | 269 | 37 | 282 | 4.92e-27 | 106 |
| MS.gene053340.t1 | AT1G34750 | 30.035 | 283 | 167 | 5 | 15 | 269 | 2 | 281 | 6.59e-26 | 103 |
| MS.gene053340.t1 | AT1G34750 | 30.035 | 283 | 167 | 5 | 15 | 269 | 2 | 281 | 6.59e-26 | 103 |
| MS.gene053340.t1 | AT1G34750 | 30.035 | 283 | 167 | 5 | 15 | 269 | 2 | 281 | 6.59e-26 | 103 |
| MS.gene053340.t1 | AT4G31750 | 30.233 | 215 | 125 | 5 | 80 | 269 | 65 | 279 | 2.38e-24 | 99.8 |
| MS.gene053340.t1 | AT4G31750 | 30.233 | 215 | 125 | 5 | 80 | 269 | 65 | 279 | 2.38e-24 | 99.8 |
| MS.gene053340.t1 | AT4G31750 | 30.233 | 215 | 125 | 5 | 80 | 269 | 65 | 279 | 3.13e-24 | 99.4 |
| MS.gene053340.t1 | AT5G24940 | 28.767 | 219 | 129 | 6 | 77 | 269 | 62 | 279 | 1.41e-22 | 96.7 |
| MS.gene053340.t1 | AT2G34740 | 28.906 | 256 | 146 | 5 | 42 | 269 | 87 | 334 | 9.77e-22 | 93.2 |
| MS.gene053340.t1 | AT5G10740 | 26.512 | 215 | 133 | 4 | 80 | 269 | 65 | 279 | 2.17e-20 | 89.7 |
| MS.gene053340.t1 | AT5G10740 | 26.512 | 215 | 133 | 4 | 80 | 269 | 65 | 279 | 2.17e-20 | 89.7 |
| MS.gene053340.t1 | AT4G28400 | 32.710 | 214 | 108 | 6 | 41 | 226 | 34 | 239 | 1.37e-18 | 83.2 |
| MS.gene053340.t1 | AT5G53140 | 25.581 | 215 | 135 | 3 | 80 | 269 | 133 | 347 | 4.37e-16 | 77.8 |
| MS.gene053340.t1 | AT5G53140 | 25.581 | 215 | 135 | 3 | 80 | 269 | 133 | 347 | 4.37e-16 | 77.8 |
Find 50 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATTAGCTTGCAAATATT+TGG | 0.174722 | 1.4:+26215598 | None:intergenic |
| TGCTCCCTTGAGTGTTTCTT+TGG | 0.234406 | 1.4:+26214805 | None:intergenic |
| ACATCTGTGATGATAATAAA+TGG | 0.273873 | 1.4:-26214716 | MS.gene053340:CDS |
| TGATAAGATTCACTGCTTCT+TGG | 0.281632 | 1.4:+26213704 | None:intergenic |
| AACTTGTGGTTGGAAGTTAT+TGG | 0.296396 | 1.4:-26213966 | MS.gene053340:CDS |
| GTGGAGCATGATTGGATTAA+TGG | 0.328700 | 1.4:-26215731 | MS.gene053340:CDS |
| TAGTACTGAATTTGTGATCT+TGG | 0.340761 | 1.4:-26213935 | MS.gene053340:CDS |
| GAATGATTAAACATGAAATA+TGG | 0.342084 | 1.4:+26213611 | None:intergenic |
| CTTAGGAATCTTTGATACTT+TGG | 0.361268 | 1.4:-26215636 | MS.gene053340:CDS |
| TCTGTGATACCAATGTTTCT+TGG | 0.370921 | 1.4:+26214598 | None:intergenic |
| ACATGATGACCATGTGATAT+TGG | 0.372321 | 1.4:+26215755 | None:intergenic |
| AAGAAGCAGTGAATCTTATC+AGG | 0.393702 | 1.4:-26213702 | MS.gene053340:CDS |
| TCAGATGAAACATGCATCAT+AGG | 0.400144 | 1.4:-26214743 | MS.gene053340:CDS |
| GGAATCTTTGATACTTTGGT+TGG | 0.403046 | 1.4:-26215632 | MS.gene053340:CDS |
| ACAAGAAGCAGCAGAGTGTT+TGG | 0.405610 | 1.4:-26213665 | MS.gene053340:CDS |
| AGGGTGAAACTCTCATGTTT+AGG | 0.405777 | 1.4:-26215833 | MS.gene053340:CDS |
| TCTTGGCAAGCAATGGCATA+TGG | 0.410623 | 1.4:-26213918 | MS.gene053340:CDS |
| TTGATTTGCACAGGCACTTA+GGG | 0.431266 | 1.4:-26215852 | MS.gene053340:intron |
| GTGATACAAAGAGAGCAAAT+TGG | 0.443813 | 1.4:-26215677 | MS.gene053340:CDS |
| GTAAGAAGAAATCATGGAGT+TGG | 0.448595 | 1.4:-26215800 | MS.gene053340:CDS |
| ATCATGTGGTGGAGCATGAT+TGG | 0.450402 | 1.4:-26215739 | MS.gene053340:CDS |
| ATTGATTTGCACAGGCACTT+AGG | 0.458682 | 1.4:-26215853 | MS.gene053340:intron |
| AATTATGTTAGTCTCATTTG+AGG | 0.462042 | 1.4:-26214835 | MS.gene053340:intron |
| AGAAAGGTAAGAAGAAATCA+TGG | 0.465978 | 1.4:-26215806 | MS.gene053340:CDS |
| TGGCTAAGGAAGCATTGGTT+AGG | 0.478204 | 1.4:-26213645 | MS.gene053340:CDS |
| AGCAGCAGAGTGTTTGGCTA+AGG | 0.497684 | 1.4:-26213659 | MS.gene053340:CDS |
| GAGACAGAATTGTGGTACTT+AGG | 0.501693 | 1.4:-26215653 | MS.gene053340:CDS |
| TTCTAAAGCTTCAGAACTTG+TGG | 0.505454 | 1.4:-26213980 | MS.gene053340:CDS |
| AAAGCTTCAGAACTTGTGGT+TGG | 0.510242 | 1.4:-26213976 | MS.gene053340:CDS |
| GGTGTAGCTTATCAGACAGT+TGG | 0.512199 | 1.4:-26214638 | MS.gene053340:CDS |
| AAACACTCTGCTGCTTCTTG+TGG | 0.521856 | 1.4:+26213667 | None:intergenic |
| CTTGGCAAGCAATGGCATAT+GGG | 0.527736 | 1.4:-26213917 | MS.gene053340:CDS |
| CTCATGTTTAGGAAATAGAA+AGG | 0.530586 | 1.4:-26215822 | MS.gene053340:CDS |
| GTGTTTGGCTAAGGAAGCAT+TGG | 0.535898 | 1.4:-26213650 | MS.gene053340:CDS |
| ATCAATCATCCAAGAAACAT+TGG | 0.538131 | 1.4:-26214607 | MS.gene053340:CDS |
| GAGTTGGAAGCAAGCCATCA+TGG | 0.546613 | 1.4:-26215784 | MS.gene053340:CDS |
| AAAAGCCAAAGAAACACTCA+AGG | 0.578073 | 1.4:-26214810 | MS.gene053340:CDS |
| GAATCTTATCAGGCACATAG+AGG | 0.593854 | 1.4:-26213692 | MS.gene053340:CDS |
| AGTTCTGTAATCTCCGATGT+TGG | 0.599281 | 1.4:+26214676 | None:intergenic |
| AGGTAATGCAACAGGTACAA+AGG | 0.604493 | 1.4:-26214004 | MS.gene053340:intron |
| TTTGTGATCTTGGCAAGCAA+TGG | 0.607158 | 1.4:-26213925 | MS.gene053340:CDS |
| ACACTCAAGGGAGCATACCT+AGG | 0.633010 | 1.4:-26214797 | MS.gene053340:CDS |
| ATCACATGGTCATCATGTGG+TGG | 0.639046 | 1.4:-26215750 | MS.gene053340:CDS |
| AAACTTGTGCTAGCCAACAT+CGG | 0.644251 | 1.4:-26214689 | MS.gene053340:CDS |
| GATATTGGCATCATCCATGA+TGG | 0.650715 | 1.4:+26215770 | None:intergenic |
| GGCAAGCAATGGCATATGGG+AGG | 0.662078 | 1.4:-26213914 | MS.gene053340:intron |
| AAAGCCAAAGAAACACTCAA+GGG | 0.667414 | 1.4:-26214809 | MS.gene053340:CDS |
| TGGATGATGCCAATATCACA+TGG | 0.692201 | 1.4:-26215764 | MS.gene053340:CDS |
| AAATTGGTGAGACAGAATTG+TGG | 0.696148 | 1.4:-26215661 | MS.gene053340:CDS |
| AATATCACATGGTCATCATG+TGG | 0.739236 | 1.4:-26215753 | MS.gene053340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAGAAAAAAAATATTTA+AGG | - | chr1.4:26213692-26213711 | MS.gene053340:CDS | 10.0% |
| !!! | TTTATGTATTTATTTCTATA+AGG | - | chr1.4:26214243-26214262 | MS.gene053340:intron | 10.0% |
| !! | TTTAAGGGAAAAATAATATA+TGG | - | chr1.4:26213708-26213727 | MS.gene053340:CDS | 15.0% |
| !! | AATGAAAATTGAGAAGTAAA+AGG | - | chr1.4:26214680-26214699 | MS.gene053340:CDS | 20.0% |
| !! | ATAAAGAACATAATCTCATA+AGG | + | chr1.4:26213741-26213760 | None:intergenic | 20.0% |
| !! | ATGAAAATTGAGAAGTAAAA+GGG | - | chr1.4:26214681-26214700 | MS.gene053340:CDS | 20.0% |
| !! | GAATGATTAAACATGAAATA+TGG | + | chr1.4:26216036-26216055 | None:intergenic | 20.0% |
| !! | GAGAAAATAGGAAATTATAT+GGG | + | chr1.4:26214746-26214765 | None:intergenic | 20.0% |
| !! | TAAAGAACATAATCTCATAA+GGG | + | chr1.4:26213740-26213759 | None:intergenic | 20.0% |
| !! | TAATATTGTTATATTGAGAG+AGG | + | chr1.4:26215506-26215525 | None:intergenic | 20.0% |
| !! | TGAGAAAATAGGAAATTATA+TGG | + | chr1.4:26214747-26214766 | None:intergenic | 20.0% |
| !! | TTTCAAATTATTAGTTGTGT+CGG | - | chr1.4:26214587-26214606 | MS.gene053340:intron | 20.0% |
| !!! | ATAATTAGCTTGCAAATATT+TGG | + | chr1.4:26214049-26214068 | None:intergenic | 20.0% |
| !!! | TATATTTTCATAAGCTATCA+TGG | - | chr1.4:26214307-26214326 | MS.gene053340:intron | 20.0% |
| !!! | TCTTTTTGAAATGTTTAGAA+TGG | - | chr1.4:26215100-26215119 | MS.gene053340:intron | 20.0% |
| !!! | TTACTCAGAATTTTTTGTAA+TGG | + | chr1.4:26215775-26215794 | None:intergenic | 20.0% |
| !!! | TTGTAATGGATAAATATCTT+GGG | + | chr1.4:26215761-26215780 | None:intergenic | 20.0% |
| !!! | TTTGTAATGGATAAATATCT+TGG | + | chr1.4:26215762-26215781 | None:intergenic | 20.0% |
| ! | ACATCTGTGATGATAATAAA+TGG | - | chr1.4:26214928-26214947 | MS.gene053340:intron | 25.0% |
| ! | AGTCTCACAAATACTTATAT+CGG | - | chr1.4:26214397-26214416 | MS.gene053340:intron | 25.0% |
| ! | TAAGCTATGAAAATAGCTTA+TGG | - | chr1.4:26215283-26215302 | MS.gene053340:intron | 25.0% |
| ! | TGGATATAAGATGAAAACTA+TGG | - | chr1.4:26214338-26214357 | MS.gene053340:intron | 25.0% |
| ! | TTGGTTGTCACATTTAATAA+TGG | - | chr1.4:26215575-26215594 | MS.gene053340:intron | 25.0% |
| !! | AATTATGTTAGTCTCATTTG+AGG | - | chr1.4:26214809-26214828 | MS.gene053340:CDS | 25.0% |
| !! | CTATAAGTGAGTATATGTTT+TGG | - | chr1.4:26215556-26215575 | MS.gene053340:intron | 25.0% |
| !!! | TCCATCTTTTTCATTCAATT+GGG | - | chr1.4:26215453-26215472 | MS.gene053340:intron | 25.0% |
| !!! | TGTAATGGATAAATATCTTG+GGG | + | chr1.4:26215760-26215779 | None:intergenic | 25.0% |
| !!! | TTCCATCTTTTTCATTCAAT+TGG | - | chr1.4:26215452-26215471 | MS.gene053340:intron | 25.0% |
| AAGCTATCATGGAAAGTTTA+TGG | - | chr1.4:26214318-26214337 | MS.gene053340:intron | 30.0% | |
| ACTGTCATAAGAATTTGAGA+TGG | + | chr1.4:26215344-26215363 | None:intergenic | 30.0% | |
| AGAAAGGTAAGAAGAAATCA+TGG | - | chr1.4:26213838-26213857 | MS.gene053340:intron | 30.0% | |
| ATCAATCATCCAAGAAACAT+TGG | - | chr1.4:26215037-26215056 | MS.gene053340:intron | 30.0% | |
| ATCTCAAATTCTTATGACAG+TGG | - | chr1.4:26215343-26215362 | MS.gene053340:intron | 30.0% | |
| CTCATGTTTAGGAAATAGAA+AGG | - | chr1.4:26213822-26213841 | MS.gene053340:intron | 30.0% | |
| CTTAGGAATCTTTGATACTT+TGG | - | chr1.4:26214008-26214027 | MS.gene053340:intron | 30.0% | |
| CTTATTCCATTGTTACATGA+AGG | - | chr1.4:26213657-26213676 | MS.gene053340:CDS | 30.0% | |
| CTTGAATGGAAGAACAAAAT+AGG | - | chr1.4:26214179-26214198 | MS.gene053340:intron | 30.0% | |
| GCAATAAATCACAATGCATT+TGG | + | chr1.4:26214708-26214727 | None:intergenic | 30.0% | |
| GTCTTTGCTTGTTTACTTAT+TGG | - | chr1.4:26214465-26214484 | MS.gene053340:intron | 30.0% | |
| TCATCACCTACAAAATACAT+AGG | + | chr1.4:26215916-26215935 | None:intergenic | 30.0% | |
| TCCCAATTGAATGAAAAAGA+TGG | + | chr1.4:26215457-26215476 | None:intergenic | 30.0% | |
| ! | AGATTTTCACTTCAAAGTCA+AGG | - | chr1.4:26213611-26213630 | MS.gene053340:CDS | 30.0% |
| ! | CATAAGAATTTGAGATGGTT+TGG | + | chr1.4:26215339-26215358 | None:intergenic | 30.0% |
| ! | CCAGAAGTATATGAGAAAAT+AGG | + | chr1.4:26214758-26214777 | None:intergenic | 30.0% |
| ! | CCTATTTTCTCATATACTTC+TGG | - | chr1.4:26214755-26214774 | MS.gene053340:CDS | 30.0% |
| ! | TAGTACTGAATTTGTGATCT+TGG | - | chr1.4:26215709-26215728 | MS.gene053340:CDS | 30.0% |
| ! | TTCTGAGTAAAACATTTTCG+AGG | - | chr1.4:26215785-26215804 | MS.gene053340:CDS | 30.0% |
| ! | TTTTGACAAGAATCTCAAAG+AGG | - | chr1.4:26214068-26214087 | MS.gene053340:intron | 30.0% |
| !! | GAAATTCTATTGATTTGCAC+AGG | - | chr1.4:26213783-26213802 | MS.gene053340:intron | 30.0% |
| AAAAGCCAAAGAAACACTCA+AGG | - | chr1.4:26214834-26214853 | MS.gene053340:intron | 35.0% | |
| AAAGAGCCTTCATGTAACAA+TGG | + | chr1.4:26213666-26213685 | None:intergenic | 35.0% | |
| AAAGCCAAAGAAACACTCAA+GGG | - | chr1.4:26214835-26214854 | MS.gene053340:intron | 35.0% | |
| AAATTGGTGAGACAGAATTG+TGG | - | chr1.4:26213983-26214002 | MS.gene053340:CDS | 35.0% | |
| AACTTGTGGTTGGAAGTTAT+TGG | - | chr1.4:26215678-26215697 | MS.gene053340:CDS | 35.0% | |
| AAGAAGCAGTGAATCTTATC+AGG | - | chr1.4:26215942-26215961 | MS.gene053340:intron | 35.0% | |
| AAGCAGTATTAGGTCATGTT+TGG | - | chr1.4:26215149-26215168 | MS.gene053340:intron | 35.0% | |
| AATATCACATGGTCATCATG+TGG | - | chr1.4:26213891-26213910 | MS.gene053340:intron | 35.0% | |
| AATCCAAACAAACCCTAAGT+AGG | - | chr1.4:26215387-26215406 | MS.gene053340:intron | 35.0% | |
| ACATGATGACCATGTGATAT+TGG | + | chr1.4:26213892-26213911 | None:intergenic | 35.0% | |
| GGAATCTTTGATACTTTGGT+TGG | - | chr1.4:26214012-26214031 | MS.gene053340:intron | 35.0% | |
| GTAAGAAGAAATCATGGAGT+TGG | - | chr1.4:26213844-26213863 | MS.gene053340:intron | 35.0% | |
| GTGATACAAAGAGAGCAAAT+TGG | - | chr1.4:26213967-26213986 | MS.gene053340:CDS | 35.0% | |
| TCAGATGAAACATGCATCAT+AGG | - | chr1.4:26214901-26214920 | MS.gene053340:intron | 35.0% | |
| TCTGTGATACCAATGTTTCT+TGG | + | chr1.4:26215049-26215068 | None:intergenic | 35.0% | |
| TGATAAGATTCACTGCTTCT+TGG | + | chr1.4:26215943-26215962 | None:intergenic | 35.0% | |
| ! | AGAACTGTTTTGTGTAGAGA+TGG | - | chr1.4:26214985-26215004 | MS.gene053340:intron | 35.0% |
| ! | AGATGGTTTGGAAGAACTTA+TGG | + | chr1.4:26215327-26215346 | None:intergenic | 35.0% |
| ! | ATCAATGATGCTTTTGAGCT+TGG | - | chr1.4:26214150-26214169 | MS.gene053340:intron | 35.0% |
| ! | GAGTCTCCTATGTATTTTGT+AGG | - | chr1.4:26215907-26215926 | MS.gene053340:intron | 35.0% |
| ! | GTAATTACAAGTGTCGTTGT+CGG | + | chr1.4:26214550-26214569 | None:intergenic | 35.0% |
| ! | TACTTATTGGCTACAAAGCA+CGG | - | chr1.4:26214478-26214497 | MS.gene053340:intron | 35.0% |
| ! | TCAATGATGCTTTTGAGCTT+GGG | - | chr1.4:26214151-26214170 | MS.gene053340:intron | 35.0% |
| !! | AACTGATTTGTGTCCTACTT+AGG | + | chr1.4:26215403-26215422 | None:intergenic | 35.0% |
| !! | AATGGCTATGTCGATTCATT+TGG | - | chr1.4:26215118-26215137 | MS.gene053340:intron | 35.0% |
| !! | ACTGATTTGTGTCCTACTTA+GGG | + | chr1.4:26215402-26215421 | None:intergenic | 35.0% |
| !! | ATGGCTATGTCGATTCATTT+GGG | - | chr1.4:26215119-26215138 | MS.gene053340:intron | 35.0% |
| !! | GCTCAAAAGCATCATTGATT+TGG | + | chr1.4:26214149-26214168 | None:intergenic | 35.0% |
| !! | TTCTAAAGCTTCAGAACTTG+TGG | - | chr1.4:26215664-26215683 | MS.gene053340:CDS | 35.0% |
| !!! | TGATCTTTGTTTTTGCACCT+AGG | + | chr1.4:26214867-26214886 | None:intergenic | 35.0% |
| !!! | TGGTATCACAGACTTTTTTC+AGG | - | chr1.4:26215057-26215076 | MS.gene053340:intron | 35.0% |
| AAACTTGTGCTAGCCAACAT+CGG | - | chr1.4:26214955-26214974 | MS.gene053340:intron | 40.0% | |
| AAAGCTTCAGAACTTGTGGT+TGG | - | chr1.4:26215668-26215687 | MS.gene053340:CDS | 40.0% | |
| ACTAATTCAGTGCTGCATTC+TGG | + | chr1.4:26215433-26215452 | None:intergenic | 40.0% | |
| AGGGTGAAACTCTCATGTTT+AGG | - | chr1.4:26213811-26213830 | MS.gene053340:intron | 40.0% | |
| AGGTAATGCAACAGGTACAA+AGG | - | chr1.4:26215640-26215659 | MS.gene053340:CDS | 40.0% | |
| AGTTCTGTAATCTCCGATGT+TGG | + | chr1.4:26214971-26214990 | None:intergenic | 40.0% | |
| ATCCGTGCTTCATAGCTTAT+TGG | - | chr1.4:26214649-26214668 | MS.gene053340:CDS | 40.0% | |
| CTCCAATAAGCTATGAAGCA+CGG | + | chr1.4:26214654-26214673 | None:intergenic | 40.0% | |
| GAAGTAACAGCATGTGAATC+AGG | - | chr1.4:26215620-26215639 | MS.gene053340:CDS | 40.0% | |
| GAATCTTATCAGGCACATAG+AGG | - | chr1.4:26215952-26215971 | MS.gene053340:intron | 40.0% | |
| GAGACAGAATTGTGGTACTT+AGG | - | chr1.4:26213991-26214010 | MS.gene053340:CDS | 40.0% | |
| GATATTGGCATCATCCATGA+TGG | + | chr1.4:26213877-26213896 | None:intergenic | 40.0% | |
| GTGGAGCATGATTGGATTAA+TGG | - | chr1.4:26213913-26213932 | MS.gene053340:intron | 40.0% | |
| TAAGCTATGAAGCACGGATA+TGG | + | chr1.4:26214648-26214667 | None:intergenic | 40.0% | |
| TGGATGATGCCAATATCACA+TGG | - | chr1.4:26213880-26213899 | MS.gene053340:intron | 40.0% | |
| TGTGAATCAGGTAATGCAAC+AGG | - | chr1.4:26215632-26215651 | MS.gene053340:CDS | 40.0% | |
| TTTGTGATCTTGGCAAGCAA+TGG | - | chr1.4:26215719-26215738 | MS.gene053340:CDS | 40.0% | |
| ! | TGTCCTACTTAGGGTTTGTT+TGG | + | chr1.4:26215393-26215412 | None:intergenic | 40.0% |
| !! | ATGTCGATTCATTTGGGAGA+TGG | - | chr1.4:26215125-26215144 | MS.gene053340:intron | 40.0% |
| !! | ATTGATTTGCACAGGCACTT+AGG | - | chr1.4:26213791-26213810 | MS.gene053340:intron | 40.0% |
| !! | TTGATTTGCACAGGCACTTA+GGG | - | chr1.4:26213792-26213811 | MS.gene053340:intron | 40.0% |
| ATCACATGGTCATCATGTGG+TGG | - | chr1.4:26213894-26213913 | MS.gene053340:intron | 45.0% | |
| ATGAAGCACGGATATGGACA+CGG | + | chr1.4:26214642-26214661 | None:intergenic | 45.0% | |
| CTTGGCAAGCAATGGCATAT+GGG | - | chr1.4:26215727-26215746 | MS.gene053340:CDS | 45.0% | |
| GGGAGATGGAAAGCAGTATT+AGG | - | chr1.4:26215139-26215158 | MS.gene053340:intron | 45.0% | |
| GGTGTAGCTTATCAGACAGT+TGG | - | chr1.4:26215006-26215025 | MS.gene053340:intron | 45.0% | |
| TCTTGGCAAGCAATGGCATA+TGG | - | chr1.4:26215726-26215745 | MS.gene053340:CDS | 45.0% | |
| TGCTCCCTTGAGTGTTTCTT+TGG | + | chr1.4:26214842-26214861 | None:intergenic | 45.0% | |
| ! | AAACACTCTGCTGCTTCTTG+TGG | + | chr1.4:26215980-26215999 | None:intergenic | 45.0% |
| ! | ACAAGAAGCAGCAGAGTGTT+TGG | - | chr1.4:26215979-26215998 | MS.gene053340:intron | 45.0% |
| ! | ATCATGTGGTGGAGCATGAT+TGG | - | chr1.4:26213905-26213924 | MS.gene053340:intron | 45.0% |
| ! | GTGTTTGGCTAAGGAAGCAT+TGG | - | chr1.4:26215994-26216013 | MS.gene053340:intron | 45.0% |
| !! | TGGCTAAGGAAGCATTGGTT+AGG | - | chr1.4:26215999-26216018 | MS.gene053340:intron | 45.0% |
| !! | ATAAGAAAAAAAATATTTAA+GGG | - | chr1.4:26213693-26213712 | MS.gene053340:CDS | 5.0% |
| !!! | GTTTTTTTTAAAAAATAAAT+AGG | - | chr1.4:26215862-26215881 | MS.gene053340:intron | 5.0% |
| GAGCTTGGGAGACTCTTGAA+TGG | - | chr1.4:26214165-26214184 | MS.gene053340:intron | 50.0% | |
| GAGTTGGAAGCAAGCCATCA+TGG | - | chr1.4:26213860-26213879 | MS.gene053340:intron | 50.0% | |
| TACAAAGCACGGACACTCCT+CGG | - | chr1.4:26214489-26214508 | MS.gene053340:intron | 50.0% | |
| ! | ACACTCAAGGGAGCATACCT+AGG | - | chr1.4:26214847-26214866 | MS.gene053340:intron | 50.0% |
| ! | AGCAGCAGAGTGTTTGGCTA+AGG | - | chr1.4:26215985-26216004 | MS.gene053340:intron | 50.0% |
| ACACGACACATGTCCGACAC+TGG | + | chr1.4:26214527-26214546 | None:intergenic | 55.0% | |
| ACGGATATGGACACGGACAC+CGG | + | chr1.4:26214635-26214654 | None:intergenic | 55.0% | |
| CACGACACATGTCCGACACT+GGG | + | chr1.4:26214526-26214545 | None:intergenic | 55.0% | |
| GGCAAGCAATGGCATATGGG+AGG | - | chr1.4:26215730-26215749 | MS.gene053340:CDS | 55.0% | |
| GACTAGGCGTGTCCCAGTGT+CGG | - | chr1.4:26214511-26214530 | MS.gene053340:intron | 60.0% | |
| GTCAGTGTCCGTGTCGTGTC+CGG | - | chr1.4:26214613-26214632 | MS.gene053340:CDS | 60.0% | |
| ACTGGGACACGCCTAGTCCG+AGG | + | chr1.4:26214509-26214528 | None:intergenic | 65.0% | |
| CACGGACACCGGACACGACA+CGG | + | chr1.4:26214624-26214643 | None:intergenic | 65.0% | |
| GCACGGACACTCCTCGGACT+AGG | - | chr1.4:26214495-26214514 | MS.gene053340:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 26213600 | 26216066 | 26213600 | ID=MS.gene053340 |
| chr1.4 | mRNA | 26213600 | 26216066 | 26213600 | ID=MS.gene053340.t1;Parent=MS.gene053340 |
| chr1.4 | exon | 26216034 | 26216066 | 26216034 | ID=MS.gene053340.t1.exon1;Parent=MS.gene053340.t1 |
| chr1.4 | CDS | 26216034 | 26216066 | 26216034 | ID=cds.MS.gene053340.t1;Parent=MS.gene053340.t1 |
| chr1.4 | exon | 26215577 | 26215861 | 26215577 | ID=MS.gene053340.t1.exon2;Parent=MS.gene053340.t1 |
| chr1.4 | CDS | 26215577 | 26215861 | 26215577 | ID=cds.MS.gene053340.t1;Parent=MS.gene053340.t1 |
| chr1.4 | exon | 26214588 | 26214846 | 26214588 | ID=MS.gene053340.t1.exon3;Parent=MS.gene053340.t1 |
| chr1.4 | CDS | 26214588 | 26214846 | 26214588 | ID=cds.MS.gene053340.t1;Parent=MS.gene053340.t1 |
| chr1.4 | exon | 26213915 | 26214012 | 26213915 | ID=MS.gene053340.t1.exon4;Parent=MS.gene053340.t1 |
| chr1.4 | CDS | 26213915 | 26214012 | 26213915 | ID=cds.MS.gene053340.t1;Parent=MS.gene053340.t1 |
| chr1.4 | exon | 26213600 | 26213737 | 26213600 | ID=MS.gene053340.t1.exon5;Parent=MS.gene053340.t1 |
| chr1.4 | CDS | 26213600 | 26213737 | 26213600 | ID=cds.MS.gene053340.t1;Parent=MS.gene053340.t1 |
| Gene Sequence |
| Protein sequence |
