Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21314.t1 | AES98260.2 | 97 | 985 | 28 | 1 | 1 | 983 | 1 | 985 | 0.00E+00 | 1718.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21314.t1 | P0DMS1 | 44.8 | 1018 | 432 | 23 | 1 | 969 | 1 | 937 | 9.6e-202 | 705.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21314.t1 | G7KBM5 | 97.0 | 985 | 28 | 1 | 1 | 983 | 1 | 985 | 0.0e+00 | 1718.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027791 | MS.gene21314 | PPI |
| MS.gene048346 | MS.gene21314 | PPI |
| MS.gene008915 | MS.gene21314 | PPI |
| MS.gene069111 | MS.gene21314 | PPI |
| MS.gene065209 | MS.gene21314 | PPI |
| MS.gene046432 | MS.gene21314 | PPI |
| MS.gene070686 | MS.gene21314 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21314.t1 | MTR_5g066340 | 96.954 | 985 | 28 | 1 | 1 | 983 | 1 | 985 | 0.0 | 1967 |
| MS.gene21314.t1 | MTR_3g100190 | 56.954 | 985 | 357 | 23 | 21 | 978 | 16 | 960 | 0.0 | 998 |
| MS.gene21314.t1 | MTR_5g032060 | 51.304 | 460 | 214 | 4 | 1 | 459 | 1 | 451 | 1.21e-134 | 434 |
| MS.gene21314.t1 | MTR_5g032060 | 38.497 | 439 | 203 | 13 | 537 | 967 | 762 | 1141 | 1.01e-78 | 280 |
| MS.gene21314.t1 | MTR_8g471130 | 39.678 | 373 | 162 | 11 | 590 | 958 | 666 | 979 | 5.06e-64 | 234 |
| MS.gene21314.t1 | MTR_1g103160 | 33.091 | 275 | 156 | 6 | 1 | 264 | 1 | 258 | 8.09e-35 | 145 |
| MS.gene21314.t1 | MTR_1g103160 | 33.091 | 275 | 156 | 6 | 1 | 264 | 4 | 261 | 9.29e-35 | 144 |
| MS.gene21314.t1 | MTR_1g071540 | 56.311 | 103 | 45 | 0 | 10 | 112 | 15 | 117 | 6.87e-34 | 142 |
| MS.gene21314.t1 | MTR_7g095410 | 56.311 | 103 | 45 | 0 | 10 | 112 | 13 | 115 | 7.03e-33 | 139 |
| MS.gene21314.t1 | MTR_7g095410 | 56.311 | 103 | 45 | 0 | 10 | 112 | 13 | 115 | 7.44e-33 | 138 |
| MS.gene21314.t1 | MTR_5g006520 | 29.478 | 268 | 145 | 4 | 10 | 269 | 13 | 244 | 3.80e-31 | 133 |
| MS.gene21314.t1 | MTR_5g006520 | 29.478 | 268 | 145 | 4 | 10 | 269 | 13 | 244 | 8.53e-31 | 132 |
| MS.gene21314.t1 | MTR_5g075490 | 50.505 | 99 | 45 | 1 | 9 | 103 | 20 | 118 | 2.02e-25 | 112 |
| MS.gene21314.t1 | MTR_1g103160 | 30.453 | 243 | 141 | 6 | 33 | 264 | 1 | 226 | 1.81e-22 | 105 |
| MS.gene21314.t1 | MTR_7g095410 | 53.750 | 80 | 37 | 0 | 33 | 112 | 1 | 80 | 3.59e-21 | 100 |
| MS.gene21314.t1 | MTR_7g108070 | 49.367 | 79 | 37 | 2 | 11 | 86 | 10 | 88 | 4.79e-19 | 89.4 |
| MS.gene21314.t1 | MTR_1g088965 | 36.364 | 121 | 72 | 2 | 2 | 119 | 8 | 126 | 3.48e-17 | 86.3 |
| MS.gene21314.t1 | MTR_3g467610 | 42.353 | 85 | 39 | 1 | 33 | 107 | 15 | 99 | 1.92e-14 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21314.t1 | AT1G58215 | 45.972 | 1018 | 420 | 24 | 1 | 969 | 1 | 937 | 0.0 | 790 |
| MS.gene21314.t1 | AT1G09720 | 44.165 | 994 | 449 | 23 | 1 | 969 | 1 | 913 | 0.0 | 714 |
| MS.gene21314.t1 | AT2G22560 | 39.476 | 1031 | 471 | 22 | 1 | 967 | 1 | 942 | 0.0 | 655 |
| MS.gene21314.t1 | AT5G10500 | 40.284 | 633 | 308 | 14 | 1 | 614 | 1 | 582 | 3.24e-122 | 393 |
| MS.gene21314.t1 | AT5G10500 | 39.256 | 242 | 127 | 5 | 726 | 966 | 619 | 841 | 1.14e-41 | 165 |
| MS.gene21314.t1 | AT3G22790 | 33.033 | 333 | 185 | 11 | 1 | 322 | 4 | 309 | 7.38e-37 | 151 |
| MS.gene21314.t1 | AT3G22790 | 33.033 | 333 | 185 | 11 | 1 | 322 | 4 | 309 | 7.38e-37 | 151 |
| MS.gene21314.t1 | AT3G22790 | 33.033 | 333 | 185 | 11 | 1 | 322 | 4 | 309 | 7.38e-37 | 151 |
| MS.gene21314.t1 | AT4G14760 | 33.206 | 262 | 136 | 5 | 3 | 264 | 6 | 228 | 5.19e-34 | 142 |
| MS.gene21314.t1 | AT4G14760 | 33.206 | 262 | 136 | 5 | 3 | 264 | 6 | 228 | 5.19e-34 | 142 |
| MS.gene21314.t1 | AT4G14760 | 33.206 | 262 | 136 | 5 | 3 | 264 | 6 | 228 | 5.19e-34 | 142 |
| MS.gene21314.t1 | AT4G14760 | 33.206 | 262 | 136 | 5 | 3 | 264 | 6 | 228 | 5.19e-34 | 142 |
| MS.gene21314.t1 | AT1G03080 | 46.617 | 133 | 70 | 1 | 7 | 138 | 9 | 141 | 6.65e-33 | 139 |
| MS.gene21314.t1 | AT1G03080 | 46.617 | 133 | 70 | 1 | 7 | 138 | 9 | 141 | 6.65e-33 | 139 |
| MS.gene21314.t1 | AT1G03080 | 46.617 | 133 | 70 | 1 | 7 | 138 | 9 | 141 | 6.65e-33 | 139 |
| MS.gene21314.t1 | AT4G02710 | 32.534 | 292 | 150 | 9 | 5 | 264 | 5 | 281 | 4.01e-32 | 135 |
| MS.gene21314.t1 | AT2G30500 | 51.807 | 83 | 40 | 0 | 9 | 91 | 20 | 102 | 2.88e-23 | 105 |
| MS.gene21314.t1 | AT2G30500 | 51.807 | 83 | 40 | 0 | 9 | 91 | 20 | 102 | 2.88e-23 | 105 |
| MS.gene21314.t1 | AT2G30500 | 51.807 | 83 | 40 | 0 | 9 | 91 | 19 | 101 | 2.99e-23 | 105 |
| MS.gene21314.t1 | AT5G58320 | 46.988 | 83 | 44 | 0 | 12 | 94 | 23 | 105 | 1.88e-20 | 96.7 |
| MS.gene21314.t1 | AT5G58320 | 46.988 | 83 | 44 | 0 | 12 | 94 | 23 | 105 | 1.88e-20 | 96.7 |
| MS.gene21314.t1 | AT5G58320 | 46.988 | 83 | 44 | 0 | 12 | 94 | 23 | 105 | 2.05e-20 | 97.1 |
| MS.gene21314.t1 | AT5G58320 | 46.988 | 83 | 44 | 0 | 12 | 94 | 23 | 105 | 2.05e-20 | 97.1 |
| MS.gene21314.t1 | AT1G03470 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 9.66e-20 | 90.9 |
| MS.gene21314.t1 | AT1G03470 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 9.66e-20 | 90.9 |
| MS.gene21314.t1 | AT1G03470 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 9.66e-20 | 90.9 |
| MS.gene21314.t1 | AT1G03470 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 9.66e-20 | 90.9 |
| MS.gene21314.t1 | AT2G47920 | 37.391 | 115 | 70 | 1 | 12 | 126 | 11 | 123 | 6.50e-19 | 87.4 |
| MS.gene21314.t1 | AT2G47920 | 37.391 | 115 | 70 | 1 | 12 | 126 | 11 | 123 | 6.50e-19 | 87.4 |
| MS.gene21314.t1 | AT5G58320 | 43.548 | 62 | 35 | 0 | 33 | 94 | 1 | 62 | 6.00e-11 | 66.2 |
Find 114 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCTTTCTTTGGAACTTT+TGG | 0.165763 | 5.4:+51947840 | None:intergenic |
| CAAACTTCAGAAGGATATTT+TGG | 0.174256 | 5.4:-51947697 | MS.gene21314:CDS |
| TGTAATATTGAGCATTTATC+TGG | 0.213401 | 5.4:-51946895 | MS.gene21314:CDS |
| GATGAACTTGATCAAGATAT+TGG | 0.225836 | 5.4:-51944955 | MS.gene21314:CDS |
| GGACTTCGAAAATCTTTCTT+TGG | 0.230243 | 5.4:+51947831 | None:intergenic |
| CAAATTTGCTCTCTCTCTAT+TGG | 0.234019 | 5.4:+51944760 | None:intergenic |
| CGACGATGCTAGAGCTTTAA+TGG | 0.236758 | 5.4:-51947529 | MS.gene21314:CDS |
| TAAGGCTCTATATGCTTTAA+AGG | 0.251382 | 5.4:+51948037 | None:intergenic |
| CAGAAATGTATTACAGAAAA+AGG | 0.258144 | 5.4:-51948088 | MS.gene21314:CDS |
| ATCGATTAACCATACCGTTT+TGG | 0.270773 | 5.4:+51947112 | None:intergenic |
| TCAAACAAATATAAAGAAAT+TGG | 0.271471 | 5.4:-51947067 | MS.gene21314:CDS |
| TGAGAAACTATAAAGATGTT+AGG | 0.274715 | 5.4:-51946459 | MS.gene21314:CDS |
| TGATAAAGAGATAGCTAGTT+TGG | 0.295625 | 5.4:-51947286 | MS.gene21314:CDS |
| TATTCTGTGGTTGTTGTGTA+TGG | 0.298293 | 5.4:+51945717 | None:intergenic |
| CCTTTGAGGTCTTTCTTGTT+TGG | 0.305580 | 5.4:-51944880 | MS.gene21314:CDS |
| GTGAGGGTGATCAGCCTAAT+TGG | 0.310323 | 5.4:-51946549 | MS.gene21314:CDS |
| CTTTCATCTGGATTTGTGTC+TGG | 0.324484 | 5.4:+51945741 | None:intergenic |
| CTCACCTATTGCTTCTACTT+TGG | 0.326555 | 5.4:+51947725 | None:intergenic |
| TGCAGTTTGCAAGATGAATT+TGG | 0.326594 | 5.4:-51947573 | MS.gene21314:CDS |
| ATGAACTTGATCAAGATATT+GGG | 0.344497 | 5.4:-51944954 | MS.gene21314:CDS |
| TGTGAATAAAGTTGTTACTT+TGG | 0.372342 | 5.4:-51947151 | MS.gene21314:CDS |
| TGAGCTTCTCAAGGGTTCTA+AGG | 0.372530 | 5.4:+51945550 | None:intergenic |
| ATATGGTGTGGAACTTGATC+AGG | 0.373851 | 5.4:+51947948 | None:intergenic |
| TGCATTTGGTTGTTGAAGTC+AGG | 0.375894 | 5.4:+51947876 | None:intergenic |
| TTAGGACAAAACAATCAAAA+TGG | 0.380769 | 5.4:-51948710 | MS.gene21314:CDS |
| GTTGTGTATGGACTTTCATC+TGG | 0.387712 | 5.4:+51945729 | None:intergenic |
| AATAATAATAATGCAGAATC+TGG | 0.387966 | 5.4:-51945147 | MS.gene21314:CDS |
| GCTTCTCACAAACTCTTTCT+CGG | 0.388186 | 5.4:+51947665 | None:intergenic |
| TCGAGGAAAATCTCGAGTTT+TGG | 0.388680 | 5.4:-51945455 | MS.gene21314:CDS |
| AACTGAATTATCACTTTGGC+TGG | 0.398480 | 5.4:-51945253 | MS.gene21314:CDS |
| TATCCTGCATGTTGGATCCT+TGG | 0.401908 | 5.4:+51945655 | None:intergenic |
| TGCTCTCTCTCTATTGGAGC+TGG | 0.402479 | 5.4:+51944766 | None:intergenic |
| AGACAAGCGGCAAAACCTTT+CGG | 0.408126 | 5.4:-51945517 | MS.gene21314:CDS |
| TGATAAATGATCATATCTTT+CGG | 0.418812 | 5.4:+51948013 | None:intergenic |
| GGAACACAATGCAGTGTTGC+AGG | 0.421621 | 5.4:-51945232 | MS.gene21314:CDS |
| TATCAAGTTGCAAAATTTCA+AGG | 0.421926 | 5.4:-51945081 | MS.gene21314:CDS |
| GGTGGTGGGCCAGCCACATT+AGG | 0.422246 | 5.4:-51948728 | MS.gene21314:CDS |
| CACTCTTACTGTGACTGAAA+TGG | 0.422481 | 5.4:-51947193 | MS.gene21314:CDS |
| CATCGTCGTCGTCATCAATA+TGG | 0.424350 | 5.4:+51947931 | None:intergenic |
| GAGAAACTATAAAGATGTTA+GGG | 0.426679 | 5.4:-51946458 | MS.gene21314:CDS |
| AGCAGAACTAAAGACGATAA+AGG | 0.430205 | 5.4:-51945370 | MS.gene21314:CDS |
| CTTACCAAAGTAGAAGCAAT+AGG | 0.443234 | 5.4:-51947729 | MS.gene21314:CDS |
| TTTAGAATGCGGATGTCCTT+CGG | 0.445020 | 5.4:+51945335 | None:intergenic |
| GAAATCGAAGATCAGATAAC+AGG | 0.446870 | 5.4:-51947612 | MS.gene21314:CDS |
| AAAGTTTCAAAACTCAATAC+AGG | 0.450258 | 5.4:-51945400 | MS.gene21314:CDS |
| TATATTTGTTTGAAGTTCAT+CGG | 0.452191 | 5.4:+51947077 | None:intergenic |
| AGATCTGATCCTGGAGTTGT+TGG | 0.459325 | 5.4:+51947750 | None:intergenic |
| AGCGCGCATATGAAAAGTAT+TGG | 0.464414 | 5.4:-51947635 | MS.gene21314:CDS |
| AAAGATGCTGTGATAATAAG+TGG | 0.466838 | 5.4:-51945105 | MS.gene21314:CDS |
| GCGCGCATATGAAAAGTATT+GGG | 0.469606 | 5.4:-51947634 | MS.gene21314:CDS |
| AAAATTTAAAATGTTGCAAA+GGG | 0.473458 | 5.4:-51948772 | None:intergenic |
| CTAAGAGTCTTACAAAATGA+TGG | 0.474682 | 5.4:-51948131 | MS.gene21314:CDS |
| CACAAGCTCATCAATACATT+CGG | 0.475771 | 5.4:+51947170 | None:intergenic |
| GGTCAGCCATGAGCTTCTCA+AGG | 0.481788 | 5.4:+51945541 | None:intergenic |
| TCTACAAATTCAACAAGCTC+AGG | 0.483768 | 5.4:+51948065 | None:intergenic |
| GACAAAACAATCAAAATGGT+TGG | 0.491751 | 5.4:-51948706 | MS.gene21314:CDS |
| AAATATATTCCAACAACTCC+AGG | 0.494269 | 5.4:-51947759 | MS.gene21314:CDS |
| GGCCGAAGTTGAGATTGTAT+AGG | 0.501384 | 5.4:+51945303 | None:intergenic |
| GACAAAGAAATGCTTATAGC+AGG | 0.504424 | 5.4:-51947039 | MS.gene21314:CDS |
| CAGCAAGTAATGCATATTCA+TGG | 0.510883 | 5.4:-51948749 | MS.gene21314:CDS |
| ACCGCGGTGTCTTCCCAAAA+CGG | 0.512093 | 5.4:-51947126 | MS.gene21314:CDS |
| TAGAGAGAAAATTCTGTTGG+AGG | 0.517147 | 5.4:-51946497 | MS.gene21314:CDS |
| CAAGATGAAATTGCAAGAGC+AGG | 0.519849 | 5.4:-51945171 | MS.gene21314:CDS |
| ATCAAGATTGCTCATTGTAT+CGG | 0.526400 | 5.4:+51946597 | None:intergenic |
| TGATAGAGAGAAAATTCTGT+TGG | 0.526914 | 5.4:-51946500 | MS.gene21314:CDS |
| TTAGAACTGAATTATCACTT+TGG | 0.531424 | 5.4:-51945257 | MS.gene21314:CDS |
| ATGATCATATCTTTCGGCTA+AGG | 0.534484 | 5.4:+51948019 | None:intergenic |
| GTAATGCATATTCATGGTGG+TGG | 0.537310 | 5.4:-51948743 | MS.gene21314:CDS |
| TGTTGATGATCTTGCTATGA+AGG | 0.540148 | 5.4:-51946773 | MS.gene21314:CDS |
| GTCAGCCATGAGCTTCTCAA+GGG | 0.543672 | 5.4:+51945542 | None:intergenic |
| AAATGATGATGCTGTAAATG+TGG | 0.552132 | 5.4:-51946707 | MS.gene21314:CDS |
| ACTTTGGTAAGATCTGATCC+TGG | 0.553428 | 5.4:+51947741 | None:intergenic |
| TGTAGATGATTCTGTAATGA+AGG | 0.555227 | 5.4:-51946797 | MS.gene21314:CDS |
| TCGATGTTGCTATCCCGAAA+AGG | 0.556008 | 5.4:-51947807 | MS.gene21314:CDS |
| GAAGGATGTTAATACAAAAG+AGG | 0.556152 | 5.4:-51946731 | MS.gene21314:CDS |
| GAAGAATGCTCTTGTGACAA+AGG | 0.557429 | 5.4:-51945802 | MS.gene21314:CDS |
| TGTTAATGATTCTGCTACGA+AGG | 0.558641 | 5.4:-51946749 | MS.gene21314:CDS |
| GAAGCTAAAAGAATTTGAAG+AGG | 0.559023 | 5.4:-51946998 | MS.gene21314:CDS |
| TGGTTGTTGAAGTCAGGAGA+TGG | 0.559993 | 5.4:+51947882 | None:intergenic |
| TTGCAAGATGAATTTGGTGT+CGG | 0.561480 | 5.4:-51947567 | MS.gene21314:CDS |
| AAATATAAAGAAATTGGAAG+AGG | 0.563386 | 5.4:-51947061 | MS.gene21314:CDS |
| AAGGTAATAGAATACCTTTG+AGG | 0.567397 | 5.4:-51944894 | MS.gene21314:CDS |
| GGTGTCTTCCCAAAACGGTA+TGG | 0.575098 | 5.4:-51947121 | MS.gene21314:CDS |
| AATTATGCTCTTACATGTGT+CGG | 0.578796 | 5.4:+51947329 | None:intergenic |
| AACCTATACAATCTCAACTT+CGG | 0.583451 | 5.4:-51945305 | MS.gene21314:CDS |
| AATATCAGTATCCTGCATGT+TGG | 0.585085 | 5.4:+51945647 | None:intergenic |
| TGAGATCGACAAACTTCAGA+AGG | 0.592393 | 5.4:-51947706 | MS.gene21314:CDS |
| GTTGCAAGTGAGTTACAAGC+TGG | 0.597008 | 5.4:-51945024 | MS.gene21314:CDS |
| AGGCCAAGGATCCAACATGC+AGG | 0.608470 | 5.4:-51945658 | MS.gene21314:CDS |
| TAGAACCCTTGAGAAGCTCA+TGG | 0.608877 | 5.4:-51945547 | MS.gene21314:CDS |
| TTTCCTCGAGGAGGTCGTCG+AGG | 0.609070 | 5.4:+51945469 | None:intergenic |
| TAGAGCTTTAATGGCAGCAA+CGG | 0.609555 | 5.4:-51947520 | MS.gene21314:CDS |
| GACGATGAAGAAAGTGACGC+TGG | 0.613730 | 5.4:-51947915 | MS.gene21314:CDS |
| TAATGCATATTCATGGTGGT+GGG | 0.616676 | 5.4:-51948742 | MS.gene21314:CDS |
| TGGTGTATACTTGTATTCTG+TGG | 0.618446 | 5.4:+51945704 | None:intergenic |
| CATGAAAACTCATCAGCCGT+TGG | 0.621750 | 5.4:-51945573 | MS.gene21314:CDS |
| TGGTTGGATCAATGTCTCCA+AGG | 0.623539 | 5.4:-51948690 | MS.gene21314:intron |
| GCTGGTCTTAGTCTTGTGAA+AGG | 0.626712 | 5.4:-51945006 | MS.gene21314:CDS |
| AATAATAATGCAGAATCTGG+TGG | 0.627026 | 5.4:-51945144 | MS.gene21314:CDS |
| AGGGTGATCAGCCTAATTGG+AGG | 0.627112 | 5.4:-51946546 | MS.gene21314:CDS |
| TATGGTGTGGAACTTGATCA+GGG | 0.627550 | 5.4:+51947949 | None:intergenic |
| GGAGGTCGTCGAGGTCTGAA+CGG | 0.634081 | 5.4:+51945478 | None:intergenic |
| AAGGAAAACAACAAATCCGA+AGG | 0.636916 | 5.4:-51945351 | MS.gene21314:CDS |
| CTCAAGGGTTCTAAGGCCAA+CGG | 0.637618 | 5.4:+51945557 | None:intergenic |
| TCGTCGTCATCAATATGGTG+TGG | 0.638456 | 5.4:+51947936 | None:intergenic |
| TTTCGGGATAGCAACATCGA+AGG | 0.650547 | 5.4:+51947810 | None:intergenic |
| AGACCTCGACGACCTCCTCG+AGG | 0.661463 | 5.4:-51945472 | MS.gene21314:CDS |
| GAATAATATGAAACATGATG+TGG | 0.665102 | 5.4:-51946866 | MS.gene21314:CDS |
| CCAAACAAGAAAGACCTCAA+AGG | 0.666288 | 5.4:+51944880 | None:intergenic |
| TCATGGCTGACCAAGACAAG+CGG | 0.671017 | 5.4:-51945530 | MS.gene21314:CDS |
| AGTTGTTACTTTGGAAACCG+CGG | 0.672090 | 5.4:-51947142 | MS.gene21314:CDS |
| GGTTGATGATGTTTAGAATG+CGG | 0.680388 | 5.4:+51945324 | None:intergenic |
| GTGTTGCAGGATGAACTACA+AGG | 0.695061 | 5.4:-51945219 | MS.gene21314:CDS |
| CAAGTAATGCATATTCATGG+TGG | 0.697052 | 5.4:-51948746 | MS.gene21314:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAATCAGAAAATAAA+CGG | - | chr5.4:51947756-51947775 | MS.gene21314:CDS | 10.0% |
| !! | AGAAAAGATTAAAGAAAAAT+TGG | - | chr5.4:51946289-51946308 | MS.gene21314:intron | 15.0% |
| !! | TCAAACAAATATAAAGAAAT+TGG | - | chr5.4:51946454-51946473 | MS.gene21314:CDS | 15.0% |
| !! | TCCAAAATAATGATAATATA+TGG | + | chr5.4:51947176-51947195 | None:intergenic | 15.0% |
| !!! | ACCATATATTATCATTATTT+TGG | - | chr5.4:51947172-51947191 | MS.gene21314:CDS | 15.0% |
| !!! | ATACTAATTTTATTACTGAA+AGG | - | chr5.4:51946864-51946883 | MS.gene21314:CDS | 15.0% |
| !!! | TATTATCATTATTTTGGATT+TGG | - | chr5.4:51947178-51947197 | MS.gene21314:CDS | 15.0% |
| !! | AAAATCCAGATTCATAATAT+AGG | + | chr5.4:51944891-51944910 | None:intergenic | 20.0% |
| !! | AAATATAAAGAAATTGGAAG+AGG | - | chr5.4:51946460-51946479 | MS.gene21314:CDS | 20.0% |
| !! | AAATCCAGATTCATAATATA+GGG | + | chr5.4:51944890-51944909 | None:intergenic | 20.0% |
| !! | AATAATAATAATGCAGAATC+TGG | - | chr5.4:51948374-51948393 | MS.gene21314:intron | 20.0% |
| !! | ATGATGTTGAAAAGAAAAAT+AGG | - | chr5.4:51947095-51947114 | MS.gene21314:CDS | 20.0% |
| !! | CGAACAAAAATAAAATTAGT+TGG | + | chr5.4:51947683-51947702 | None:intergenic | 20.0% |
| !! | CTCAGATATACTAAAATAAT+GGG | + | chr5.4:51947336-51947355 | None:intergenic | 20.0% |
| !! | TATGTTTCTTAAACTATTAC+TGG | + | chr5.4:51947631-51947650 | None:intergenic | 20.0% |
| !! | TCTCAGATATACTAAAATAA+TGG | + | chr5.4:51947337-51947356 | None:intergenic | 20.0% |
| !! | TGATAAATGATCATATCTTT+CGG | + | chr5.4:51945511-51945530 | None:intergenic | 20.0% |
| !! | TGATGTTGAAAAGAAAAATA+GGG | - | chr5.4:51947096-51947115 | MS.gene21314:CDS | 20.0% |
| !!! | AGATTTTATTATTAGCAGAA+TGG | - | chr5.4:51947472-51947491 | MS.gene21314:CDS | 20.0% |
| !!! | TATACTAAAATAATGGGATT+TGG | + | chr5.4:51947330-51947349 | None:intergenic | 20.0% |
| !!! | TATATTTGTTTGAAGTTCAT+CGG | + | chr5.4:51946447-51946466 | None:intergenic | 20.0% |
| !!! | TTATTTTAGTATATCTGAGA+TGG | - | chr5.4:51947337-51947356 | MS.gene21314:CDS | 20.0% |
| !!! | TTGAATTTTGAACTATTTTG+AGG | + | chr5.4:51947520-51947539 | None:intergenic | 20.0% |
| ! | AAAGTTTCAAAACTCAATAC+AGG | - | chr5.4:51948121-51948140 | MS.gene21314:CDS | 25.0% |
| ! | AACTTCAACTATAAGAAACA+TGG | + | chr5.4:51945284-51945303 | None:intergenic | 25.0% |
| ! | ACATTCAAACTAAACAGATA+TGG | - | chr5.4:51945347-51945366 | MS.gene21314:CDS | 25.0% |
| ! | ACTGAAAGGATTGAAAAAAT+GGG | - | chr5.4:51946878-51946897 | MS.gene21314:CDS | 25.0% |
| ! | ATGAACTTGATCAAGATATT+GGG | - | chr5.4:51948567-51948586 | MS.gene21314:intron | 25.0% |
| ! | CAATAGAAAAATGAGAATGT+TGG | + | chr5.4:51944983-51945002 | None:intergenic | 25.0% |
| ! | CAGAAATGTATTACAGAAAA+AGG | - | chr5.4:51945433-51945452 | MS.gene21314:CDS | 25.0% |
| ! | GAATAATATGAAACATGATG+TGG | - | chr5.4:51946655-51946674 | MS.gene21314:CDS | 25.0% |
| ! | GAGAAACTATAAAGATGTTA+GGG | - | chr5.4:51947063-51947082 | MS.gene21314:CDS | 25.0% |
| ! | TACTGAAAGGATTGAAAAAA+TGG | - | chr5.4:51946877-51946896 | MS.gene21314:CDS | 25.0% |
| ! | TATTACTGGTATTTACATGT+CGG | + | chr5.4:51947617-51947636 | None:intergenic | 25.0% |
| ! | TCTCTTAAATGACGAAAAAT+CGG | + | chr5.4:51948242-51948261 | None:intergenic | 25.0% |
| ! | TGAGAAACTATAAAGATGTT+AGG | - | chr5.4:51947062-51947081 | MS.gene21314:CDS | 25.0% |
| ! | TGTAATATTGAGCATTTATC+TGG | - | chr5.4:51946626-51946645 | MS.gene21314:CDS | 25.0% |
| ! | TTAGAACTGAATTATCACTT+TGG | - | chr5.4:51948264-51948283 | MS.gene21314:intron | 25.0% |
| ! | TTAGGACAAAACAATCAAAA+TGG | - | chr5.4:51944811-51944830 | MS.gene21314:CDS | 25.0% |
| ! | TTGTTTGAATATCTACACAT+AGG | - | chr5.4:51947389-51947408 | MS.gene21314:CDS | 25.0% |
| ! | TTTGATGGAAATAATGATGT+TGG | + | chr5.4:51944920-51944939 | None:intergenic | 25.0% |
| !! | ATCATTTTGTAAGACTCTTA+GGG | + | chr5.4:51945391-51945410 | None:intergenic | 25.0% |
| !! | ATTTCTTTTCTAAATCCGAA+AGG | + | chr5.4:51948022-51948041 | None:intergenic | 25.0% |
| !! | TATCAAGTTGCAAAATTTCA+AGG | - | chr5.4:51948440-51948459 | MS.gene21314:intron | 25.0% |
| !! | TCAAAACATGTATGTTTTGT+TGG | - | chr5.4:51944935-51944954 | MS.gene21314:CDS | 25.0% |
| !! | TGTGAATAAAGTTGTTACTT+TGG | - | chr5.4:51946370-51946389 | MS.gene21314:intron | 25.0% |
| !! | TTTTCCAGATTATTTAGTTG+AGG | + | chr5.4:51945010-51945029 | None:intergenic | 25.0% |
| !! | TTTTCCTCAACTAAATAATC+TGG | - | chr5.4:51945003-51945022 | MS.gene21314:CDS | 25.0% |
| !!! | AAATCTTTCTTTGGAACTTT+TGG | + | chr5.4:51945684-51945703 | None:intergenic | 25.0% |
| !!! | ACAAAACATACATGTTTTGA+TGG | + | chr5.4:51944935-51944954 | None:intergenic | 25.0% |
| !!! | TCATTATTTTGGATTTGGAT+TGG | - | chr5.4:51947183-51947202 | MS.gene21314:CDS | 25.0% |
| AAAGATGCTGTGATAATAAG+TGG | - | chr5.4:51948416-51948435 | MS.gene21314:intron | 30.0% | |
| AAATATATTCCAACAACTCC+AGG | - | chr5.4:51945762-51945781 | MS.gene21314:CDS | 30.0% | |
| AACCTATACAATCTCAACTT+CGG | - | chr5.4:51948216-51948235 | MS.gene21314:intron | 30.0% | |
| AAGGTAATAGAATACCTTTG+AGG | - | chr5.4:51948627-51948646 | MS.gene21314:intron | 30.0% | |
| AATAATAATGCAGAATCTGG+TGG | - | chr5.4:51948377-51948396 | MS.gene21314:intron | 30.0% | |
| AATTATGCTCTTACATGTGT+CGG | + | chr5.4:51946195-51946214 | None:intergenic | 30.0% | |
| AATTGTTTGCCATCTTTGAA+TGG | + | chr5.4:51945050-51945069 | None:intergenic | 30.0% | |
| ATATACTAAGAAACGTACCT+TGG | + | chr5.4:51944851-51944870 | None:intergenic | 30.0% | |
| ATCAAGATTGCTCATTGTAT+CGG | + | chr5.4:51946927-51946946 | None:intergenic | 30.0% | |
| ATTGTTGATCCATTCAAAGA+TGG | - | chr5.4:51945038-51945057 | MS.gene21314:CDS | 30.0% | |
| CTAAGAGTCTTACAAAATGA+TGG | - | chr5.4:51945390-51945409 | MS.gene21314:CDS | 30.0% | |
| GAAAAAGAAGTTCTCTTAGT+TGG | + | chr5.4:51945741-51945760 | None:intergenic | 30.0% | |
| GAAAAATTGGAACAAGATTC+TGG | - | chr5.4:51946302-51946321 | MS.gene21314:intron | 30.0% | |
| GAAGCTAAAAGAATTTGAAG+AGG | - | chr5.4:51946523-51946542 | MS.gene21314:CDS | 30.0% | |
| GAAGGATGTTAATACAAAAG+AGG | - | chr5.4:51946790-51946809 | MS.gene21314:CDS | 30.0% | |
| GACAAAACAATCAAAATGGT+TGG | - | chr5.4:51944815-51944834 | MS.gene21314:CDS | 30.0% | |
| GACACAAAAAAGAACACAAA+AGG | - | chr5.4:51948608-51948627 | MS.gene21314:intron | 30.0% | |
| GATGAACTTGATCAAGATAT+TGG | - | chr5.4:51948566-51948585 | MS.gene21314:intron | 30.0% | |
| GATTTAGTCAGTTAGTACAT+CGG | - | chr5.4:51947205-51947224 | MS.gene21314:CDS | 30.0% | |
| GTCATTCTTAAATCACCAAA+TGG | + | chr5.4:51944961-51944980 | None:intergenic | 30.0% | |
| TAAGGCTCTATATGCTTTAA+AGG | + | chr5.4:51945487-51945506 | None:intergenic | 30.0% | |
| TGATAAAGAGATAGCTAGTT+TGG | - | chr5.4:51946235-51946254 | MS.gene21314:intron | 30.0% | |
| TGATAGAGAGAAAATTCTGT+TGG | - | chr5.4:51947021-51947040 | MS.gene21314:CDS | 30.0% | |
| TGTAGATGATTCTGTAATGA+AGG | - | chr5.4:51946724-51946743 | MS.gene21314:CDS | 30.0% | |
| TGTTCCCTATATTATGAATC+TGG | - | chr5.4:51944883-51944902 | MS.gene21314:CDS | 30.0% | |
| ! | AAATGATGATGCTGTAAATG+TGG | - | chr5.4:51946814-51946833 | MS.gene21314:CDS | 30.0% |
| ! | ACACTTTCTATCTGAAGTAT+TGG | + | chr5.4:51945093-51945112 | None:intergenic | 30.0% |
| ! | AGTATATCTGAGATGGAAAT+TGG | - | chr5.4:51947344-51947363 | MS.gene21314:CDS | 30.0% |
| ! | CAAACTTCAGAAGGATATTT+TGG | - | chr5.4:51945824-51945843 | MS.gene21314:intron | 30.0% |
| ! | CATCATTTTGTAAGACTCTT+AGG | + | chr5.4:51945392-51945411 | None:intergenic | 30.0% |
| ! | TGTTTTATCAATGTCGTGTA+TGG | - | chr5.4:51945255-51945274 | MS.gene21314:CDS | 30.0% |
| !! | CTATTTTGTTTAGACAGTGT+AGG | + | chr5.4:51948719-51948738 | None:intergenic | 30.0% |
| !! | GAAGCACTTTTTAGAAAATC+AGG | - | chr5.4:51947843-51947862 | MS.gene21314:CDS | 30.0% |
| !! | TTGATTGTTTTGTCCTAATG+TGG | + | chr5.4:51944809-51944828 | None:intergenic | 30.0% |
| !! | TTTCTAAAAAGTGCTTCATG+TGG | + | chr5.4:51947840-51947859 | None:intergenic | 30.0% |
| !!! | AATGTCATTTTCAGTGTTCA+TGG | - | chr5.4:51947565-51947584 | MS.gene21314:CDS | 30.0% |
| AAAAACATCTGCCTCCAATT+AGG | + | chr5.4:51946989-51947008 | None:intergenic | 35.0% | |
| AAAAATGGGACAACACGATA+AGG | - | chr5.4:51946892-51946911 | MS.gene21314:CDS | 35.0% | |
| AACTGAATTATCACTTTGGC+TGG | - | chr5.4:51948268-51948287 | MS.gene21314:intron | 35.0% | |
| AAGGAAAACAACAAATCCGA+AGG | - | chr5.4:51948170-51948189 | MS.gene21314:intron | 35.0% | |
| AATATCAGTATCCTGCATGT+TGG | + | chr5.4:51947877-51947896 | None:intergenic | 35.0% | |
| AGCAGAACTAAAGACGATAA+AGG | - | chr5.4:51948151-51948170 | MS.gene21314:CDS | 35.0% | |
| ATGATCATATCTTTCGGCTA+AGG | + | chr5.4:51945505-51945524 | None:intergenic | 35.0% | |
| CAAGTAATGCATATTCATGG+TGG | - | chr5.4:51944775-51944794 | MS.gene21314:CDS | 35.0% | |
| CACAAGCTCATCAATACATT+CGG | + | chr5.4:51946354-51946373 | None:intergenic | 35.0% | |
| CAGCAAGTAATGCATATTCA+TGG | - | chr5.4:51944772-51944791 | MS.gene21314:CDS | 35.0% | |
| CTTACCAAAGTAGAAGCAAT+AGG | - | chr5.4:51945792-51945811 | MS.gene21314:CDS | 35.0% | |
| GAAATCGAAGATCAGATAAC+AGG | - | chr5.4:51945909-51945928 | MS.gene21314:intron | 35.0% | |
| GACAAAGAAATGCTTATAGC+AGG | - | chr5.4:51946482-51946501 | MS.gene21314:CDS | 35.0% | |
| GGACTTCGAAAATCTTTCTT+TGG | + | chr5.4:51945693-51945712 | None:intergenic | 35.0% | |
| TAATGCATATTCATGGTGGT+GGG | - | chr5.4:51944779-51944798 | MS.gene21314:CDS | 35.0% | |
| TACCAATGAGTTACAGAAAG+AGG | + | chr5.4:51945323-51945342 | None:intergenic | 35.0% | |
| TAGAGAGAAAATTCTGTTGG+AGG | - | chr5.4:51947024-51947043 | MS.gene21314:CDS | 35.0% | |
| TATTCTGTGGTTGTTGTGTA+TGG | + | chr5.4:51947807-51947826 | None:intergenic | 35.0% | |
| TCTACAAATTCAACAAGCTC+AGG | + | chr5.4:51945459-51945478 | None:intergenic | 35.0% | |
| TGCAGTTTGCAAGATGAATT+TGG | - | chr5.4:51945948-51945967 | MS.gene21314:intron | 35.0% | |
| TGGTGTATACTTGTATTCTG+TGG | + | chr5.4:51947820-51947839 | None:intergenic | 35.0% | |
| TGTTAATGATTCTGCTACGA+AGG | - | chr5.4:51946772-51946791 | MS.gene21314:CDS | 35.0% | |
| ! | ATCGATTAACCATACCGTTT+TGG | + | chr5.4:51946412-51946431 | None:intergenic | 35.0% |
| ! | CAAATTTGCTCTCTCTCTAT+TGG | + | chr5.4:51948764-51948783 | None:intergenic | 35.0% |
| ! | TCGATTAACCATACCGTTTT+GGG | + | chr5.4:51946411-51946430 | None:intergenic | 35.0% |
| ! | TTCTCTTAGTTGGACCTTTT+CGG | + | chr5.4:51945731-51945750 | None:intergenic | 35.0% |
| !! | CTTTTTAGAAAATCAGGCCA+AGG | - | chr5.4:51947849-51947868 | MS.gene21314:CDS | 35.0% |
| !! | GAACGACTGATTTTTGCATT+TGG | + | chr5.4:51945662-51945681 | None:intergenic | 35.0% |
| !! | GAATCACAAGATTTTGACAC+TGG | - | chr5.4:51946950-51946969 | MS.gene21314:CDS | 35.0% |
| !! | GCAGATGTTTTTGAATGGAT+TGG | - | chr5.4:51946997-51947016 | MS.gene21314:CDS | 35.0% |
| !! | GGTTGATGATGTTTAGAATG+CGG | + | chr5.4:51948200-51948219 | None:intergenic | 35.0% |
| !! | TGTATGTTTTGTTGGCCATT+TGG | - | chr5.4:51944943-51944962 | MS.gene21314:CDS | 35.0% |
| !! | TGTTGATGATCTTGCTATGA+AGG | - | chr5.4:51946748-51946767 | MS.gene21314:CDS | 35.0% |
| !! | TTGCAAGATGAATTTGGTGT+CGG | - | chr5.4:51945954-51945973 | MS.gene21314:intron | 35.0% |
| ACCGTCTGATCTTAACCAAA+CGG | - | chr5.4:51947278-51947297 | MS.gene21314:CDS | 40.0% | |
| ACTTTGGTAAGATCTGATCC+TGG | + | chr5.4:51945783-51945802 | None:intergenic | 40.0% | |
| AGTACAGAAGTTTGTGTGAC+TGG | + | chr5.4:51947660-51947679 | None:intergenic | 40.0% | |
| ATATGGTGTGGAACTTGATC+AGG | + | chr5.4:51945576-51945595 | None:intergenic | 40.0% | |
| ATTCAATGCAGTCGGTACAA+TGG | + | chr5.4:51947307-51947326 | None:intergenic | 40.0% | |
| CAAGATGAAATTGCAAGAGC+AGG | - | chr5.4:51948350-51948369 | MS.gene21314:intron | 40.0% | |
| CACTCTTACTGTGACTGAAA+TGG | - | chr5.4:51946328-51946347 | MS.gene21314:intron | 40.0% | |
| CCAAACAAGAAAGACCTCAA+AGG | + | chr5.4:51948644-51948663 | None:intergenic | 40.0% | |
| CTCACCTATTGCTTCTACTT+TGG | + | chr5.4:51945799-51945818 | None:intergenic | 40.0% | |
| CTTTCATCTGGATTTGTGTC+TGG | + | chr5.4:51947783-51947802 | None:intergenic | 40.0% | |
| GAAGAATGCTCTTGTGACAA+AGG | - | chr5.4:51947719-51947738 | MS.gene21314:CDS | 40.0% | |
| GCTTCTCACAAACTCTTTCT+CGG | + | chr5.4:51945859-51945878 | None:intergenic | 40.0% | |
| GGATTTGGATTCAATGCAGT+CGG | + | chr5.4:51947315-51947334 | None:intergenic | 40.0% | |
| GTAATGCATATTCATGGTGG+TGG | - | chr5.4:51944778-51944797 | MS.gene21314:CDS | 40.0% | |
| GTTAGTATCAGTGTCATGTC+TGG | - | chr5.4:51945186-51945205 | MS.gene21314:CDS | 40.0% | |
| GTTGTGTATGGACTTTCATC+TGG | + | chr5.4:51947795-51947814 | None:intergenic | 40.0% | |
| TATGGTGTGGAACTTGATCA+GGG | + | chr5.4:51945575-51945594 | None:intergenic | 40.0% | |
| TCCGTTTGGTTAAGATCAGA+CGG | + | chr5.4:51947282-51947301 | None:intergenic | 40.0% | |
| TGAGATCGACAAACTTCAGA+AGG | - | chr5.4:51945815-51945834 | MS.gene21314:CDS | 40.0% | |
| TGATACTAACATGACGACGT+TGG | + | chr5.4:51945176-51945195 | None:intergenic | 40.0% | |
| TGCATTTGGTTGTTGAAGTC+AGG | + | chr5.4:51945648-51945667 | None:intergenic | 40.0% | |
| TGCCTCTTTCTGTAACTCAT+TGG | - | chr5.4:51945318-51945337 | MS.gene21314:CDS | 40.0% | |
| TTAGTCAGTTAGTACATCGG+TGG | - | chr5.4:51947208-51947227 | MS.gene21314:CDS | 40.0% | |
| ! | AAAACTCGAGATTTTCCTCG+AGG | + | chr5.4:51948067-51948086 | None:intergenic | 40.0% |
| ! | AGCGCGCATATGAAAAGTAT+TGG | - | chr5.4:51945886-51945905 | MS.gene21314:intron | 40.0% |
| ! | TAGAGCTTTAATGGCAGCAA+CGG | - | chr5.4:51946001-51946020 | MS.gene21314:intron | 40.0% |
| ! | TCGAGGAAAATCTCGAGTTT+TGG | - | chr5.4:51948066-51948085 | MS.gene21314:CDS | 40.0% |
| ! | TCTCTTAGTTGGACCTTTTC+GGG | + | chr5.4:51945730-51945749 | None:intergenic | 40.0% |
| ! | TTACATGTCGGTGTTTGTCA+CGG | + | chr5.4:51947605-51947624 | None:intergenic | 40.0% |
| ! | TTTAGAATGCGGATGTCCTT+CGG | + | chr5.4:51948189-51948208 | None:intergenic | 40.0% |
| !! | ACAAGATTTTGACACTGGTG+AGG | - | chr5.4:51946955-51946974 | MS.gene21314:CDS | 40.0% |
| !! | AGTTGTTACTTTGGAAACCG+CGG | - | chr5.4:51946379-51946398 | MS.gene21314:intron | 40.0% |
| !! | CAAGATTTTGACACTGGTGA+GGG | - | chr5.4:51946956-51946975 | MS.gene21314:CDS | 40.0% |
| !! | CCTTTGAGGTCTTTCTTGTT+TGG | - | chr5.4:51948641-51948660 | MS.gene21314:intron | 40.0% |
| !! | GCGCGCATATGAAAAGTATT+GGG | - | chr5.4:51945887-51945906 | MS.gene21314:intron | 40.0% |
| !! | TGGAGGCAGATGTTTTTGAA+TGG | - | chr5.4:51946992-51947011 | MS.gene21314:CDS | 40.0% |
| !! | TTGTTTTGTCCTAATGTGGC+TGG | + | chr5.4:51944805-51944824 | None:intergenic | 40.0% |
| !!! | CATTTTTGAGTTGGCACTTC+AGG | - | chr5.4:51947123-51947142 | MS.gene21314:CDS | 40.0% |
| !!! | TAGGGACAGCATTTTTGAGT+TGG | - | chr5.4:51947114-51947133 | MS.gene21314:CDS | 40.0% |
| ACCGTCTGATCTTGACCAAA+CGG | + | chr5.4:51947234-51947253 | None:intergenic | 45.0% | |
| AGACAAGCGGCAAAACCTTT+CGG | - | chr5.4:51948004-51948023 | MS.gene21314:CDS | 45.0% | |
| AGATCTGATCCTGGAGTTGT+TGG | + | chr5.4:51945774-51945793 | None:intergenic | 45.0% | |
| CATCGTCGTCGTCATCAATA+TGG | + | chr5.4:51945593-51945612 | None:intergenic | 45.0% | |
| CATGAAAACTCATCAGCCGT+TGG | - | chr5.4:51947948-51947967 | MS.gene21314:CDS | 45.0% | |
| GGCCGAAGTTGAGATTGTAT+AGG | + | chr5.4:51948221-51948240 | None:intergenic | 45.0% | |
| GTGTTGCAGGATGAACTACA+AGG | - | chr5.4:51948302-51948321 | MS.gene21314:intron | 45.0% | |
| GTTGCAAGTGAGTTACAAGC+TGG | - | chr5.4:51948497-51948516 | MS.gene21314:intron | 45.0% | |
| TAGAACCCTTGAGAAGCTCA+TGG | - | chr5.4:51947974-51947993 | MS.gene21314:CDS | 45.0% | |
| TATCCTGCATGTTGGATCCT+TGG | + | chr5.4:51947869-51947888 | None:intergenic | 45.0% | |
| TCGATGTTGCTATCCCGAAA+AGG | - | chr5.4:51945714-51945733 | MS.gene21314:CDS | 45.0% | |
| TCGTCGTCATCAATATGGTG+TGG | + | chr5.4:51945588-51945607 | None:intergenic | 45.0% | |
| TGAGCTTCTCAAGGGTTCTA+AGG | + | chr5.4:51947974-51947993 | None:intergenic | 45.0% | |
| TGGTTGGATCAATGTCTCCA+AGG | - | chr5.4:51944831-51944850 | MS.gene21314:CDS | 45.0% | |
| TGGTTGTTGAAGTCAGGAGA+TGG | + | chr5.4:51945642-51945661 | None:intergenic | 45.0% | |
| TTTCGGGATAGCAACATCGA+AGG | + | chr5.4:51945714-51945733 | None:intergenic | 45.0% | |
| ! | CGACGATGCTAGAGCTTTAA+TGG | - | chr5.4:51945992-51946011 | MS.gene21314:intron | 45.0% |
| ! | CGGCTGATGAGTTTTCATGT+TGG | + | chr5.4:51947947-51947966 | None:intergenic | 45.0% |
| !! | AAAGGTTTTGCCGCTTGTCT+TGG | + | chr5.4:51948004-51948023 | None:intergenic | 45.0% |
| !! | GCTGGTCTTAGTCTTGTGAA+AGG | - | chr5.4:51948515-51948534 | MS.gene21314:intron | 45.0% |
| AGGGTGATCAGCCTAATTGG+AGG | - | chr5.4:51946975-51946994 | MS.gene21314:CDS | 50.0% | |
| GACGATGAAGAAAGTGACGC+TGG | - | chr5.4:51945606-51945625 | MS.gene21314:CDS | 50.0% | |
| GCCGTTTGGTCAAGATCAGA+CGG | - | chr5.4:51947230-51947249 | MS.gene21314:CDS | 50.0% | |
| GGAACACAATGCAGTGTTGC+AGG | - | chr5.4:51948289-51948308 | MS.gene21314:intron | 50.0% | |
| GGTGTCTTCCCAAAACGGTA+TGG | - | chr5.4:51946400-51946419 | MS.gene21314:CDS | 50.0% | |
| GTCAGCCATGAGCTTCTCAA+GGG | + | chr5.4:51947982-51948001 | None:intergenic | 50.0% | |
| GTGAGGGTGATCAGCCTAAT+TGG | - | chr5.4:51946972-51946991 | MS.gene21314:CDS | 50.0% | |
| TCATGGCTGACCAAGACAAG+CGG | - | chr5.4:51947991-51948010 | MS.gene21314:CDS | 50.0% | |
| TCGGTACAATGGTGTCCGTT+TGG | + | chr5.4:51947296-51947315 | None:intergenic | 50.0% | |
| TTAGTACATCGGTGGCCGTT+TGG | - | chr5.4:51947216-51947235 | MS.gene21314:CDS | 50.0% | |
| ! | ACTCGAGATTTTCCTCGAGG+AGG | + | chr5.4:51948064-51948083 | None:intergenic | 50.0% |
| !! | CTCAAGGGTTCTAAGGCCAA+CGG | + | chr5.4:51947967-51947986 | None:intergenic | 50.0% |
| ACCGCGGTGTCTTCCCAAAA+CGG | - | chr5.4:51946395-51946414 | MS.gene21314:intron | 55.0% | |
| AGGCCAAGGATCCAACATGC+AGG | - | chr5.4:51947863-51947882 | MS.gene21314:CDS | 55.0% | |
| GGTCAGCCATGAGCTTCTCA+AGG | + | chr5.4:51947983-51948002 | None:intergenic | 55.0% | |
| !!! | ACCGTTTTGGGAAGACACCG+CGG | + | chr5.4:51946399-51946418 | None:intergenic | 55.0% |
| GGAGGTCGTCGAGGTCTGAA+CGG | + | chr5.4:51948046-51948065 | None:intergenic | 60.0% | |
| TTTCCTCGAGGAGGTCGTCG+AGG | + | chr5.4:51948055-51948074 | None:intergenic | 60.0% | |
| AGACCTCGACGACCTCCTCG+AGG | - | chr5.4:51948049-51948068 | MS.gene21314:CDS | 65.0% | |
| !! | GGTGGTGGGCCAGCCACATT+AGG | - | chr5.4:51944793-51944812 | MS.gene21314:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 51944759 | 51948784 | 51944759 | ID=MS.gene21314 |
| chr5.4 | mRNA | 51944759 | 51948784 | 51944759 | ID=MS.gene21314.t1;Parent=MS.gene21314 |
| chr5.4 | exon | 51948691 | 51948784 | 51948691 | ID=MS.gene21314.t1.exon1;Parent=MS.gene21314.t1 |
| chr5.4 | CDS | 51948691 | 51948784 | 51948691 | ID=cds.MS.gene21314.t1;Parent=MS.gene21314.t1 |
| chr5.4 | exon | 51946399 | 51948179 | 51946399 | ID=MS.gene21314.t1.exon2;Parent=MS.gene21314.t1 |
| chr5.4 | CDS | 51946399 | 51948179 | 51946399 | ID=cds.MS.gene21314.t1;Parent=MS.gene21314.t1 |
| chr5.4 | exon | 51944759 | 51945835 | 51944759 | ID=MS.gene21314.t1.exon3;Parent=MS.gene21314.t1 |
| chr5.4 | CDS | 51944759 | 51945835 | 51944759 | ID=cds.MS.gene21314.t1;Parent=MS.gene21314.t1 |
| Gene Sequence |
| Protein sequence |
