Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21376.t1 | XP_003591666.2 | 95.7 | 300 | 7 | 1 | 1 | 300 | 38 | 331 | 8.60E-161 | 576.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21376.t1 | Q7ZWS2 | 38.9 | 283 | 153 | 6 | 6 | 283 | 6 | 273 | 2.7e-46 | 187.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21376.t1 | G7I312 | 95.7 | 300 | 7 | 1 | 1 | 300 | 1 | 294 | 6.2e-161 | 576.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057478 | MS.gene21376 | -0.822913 | 1.84E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene21376 | 0.818992 | 1.47E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene21376 | 0.825463 | 4.62E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21376.t1 | MTR_1g090380 | 95.667 | 300 | 7 | 1 | 1 | 300 | 1 | 294 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21376.t1 | AT2G38680 | 68.543 | 302 | 91 | 4 | 1 | 299 | 41 | 341 | 9.19e-148 | 419 |
Find 58 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAATGGAGGATATCAAAT+TGG | 0.201664 | 1.4:-71630667 | None:intergenic |
| ATGCCACATTAACAAAGTTT+TGG | 0.238917 | 1.4:-71630052 | MS.gene21376:CDS |
| TCCAATATTAACAGGTTCTA+AGG | 0.257059 | 1.4:-71629125 | MS.gene21376:intron |
| AGAACCAATGTTCTCCTTCT+TGG | 0.265210 | 1.4:-71626891 | MS.gene21376:CDS |
| CGCCGGTCCTCAAAAGCTTC+AGG | 0.272636 | 1.4:-71630580 | MS.gene21376:intron |
| TTCATATAACTGCTGCCTTT+TGG | 0.338973 | 1.4:+71629871 | None:intergenic |
| TCACCGAATCGTTCGTGAAC+AGG | 0.376885 | 1.4:+71626954 | None:intergenic |
| AAATGAGCATGCTCTTGATA+TGG | 0.389669 | 1.4:-71626982 | MS.gene21376:CDS |
| AGTTTGCTGTGGAGCAAAAC+AGG | 0.409759 | 1.4:+71630618 | None:intergenic |
| GAAATGGAGGATATCAAATT+GGG | 0.419430 | 1.4:-71630666 | MS.gene21376:CDS |
| CCTGTATTAATATTCTCTGC+AGG | 0.422018 | 1.4:-71629275 | MS.gene21376:CDS |
| ACGCATGCTCTTCTTATTGA+AGG | 0.428415 | 1.4:-71629555 | MS.gene21376:CDS |
| CCCTTGGGCTGGAAGAGAAA+AGG | 0.437854 | 1.4:-71629820 | MS.gene21376:CDS |
| CTGGATTACCCTGCTGCAAA+AGG | 0.443495 | 1.4:+71629903 | None:intergenic |
| CCTGCAGAGAATATTAATAC+AGG | 0.451901 | 1.4:+71629275 | None:intergenic |
| TGGTGATCACACTGGAGACT+TGG | 0.455229 | 1.4:-71626871 | MS.gene21376:CDS |
| GAACGATTCGGTGATATTGA+TGG | 0.458869 | 1.4:-71626945 | MS.gene21376:CDS |
| AACCCAAAACTTTGTTAATG+TGG | 0.470399 | 1.4:+71630049 | None:intergenic |
| GGAGGATATCAAATTGGGTT+CGG | 0.474101 | 1.4:-71630661 | MS.gene21376:CDS |
| ATGTGAAGATAGTATCCAAC+AGG | 0.474848 | 1.4:-71629077 | MS.gene21376:CDS |
| GCGCCTGTTCACGAACGATT+CGG | 0.479515 | 1.4:-71626957 | MS.gene21376:CDS |
| CTTGAGCAAGTCATTGTCAT+CGG | 0.490371 | 1.4:+71626917 | None:intergenic |
| AGCAAGTCATTGTCATCGGT+TGG | 0.500842 | 1.4:+71626921 | None:intergenic |
| TACGATACTCGAATTTCTGT+GGG | 0.505866 | 1.4:-71626828 | MS.gene21376:CDS |
| CACCTTTAAAAGATACAAGT+TGG | 0.511666 | 1.4:+71629037 | None:intergenic |
| ATCCAGAATATGATGCCAAA+AGG | 0.512145 | 1.4:-71629886 | MS.gene21376:CDS |
| ATTGTTAAATACCATCCTGT+TGG | 0.514081 | 1.4:+71629062 | None:intergenic |
| ATATGAACATTACCATCCAT+TGG | 0.515894 | 1.4:-71629855 | MS.gene21376:CDS |
| CACTTTGATAACTTCCCACA+TGG | 0.519877 | 1.4:+71626385 | None:intergenic |
| CTGTATTAATATTCTCTGCA+GGG | 0.521088 | 1.4:-71629274 | MS.gene21376:CDS |
| GGGTTCGGAATTGACGCTGG+TGG | 0.526732 | 1.4:-71630646 | MS.gene21376:CDS |
| GAGTCATTTGTAGGCAGTCA+TGG | 0.540817 | 1.4:-71629926 | MS.gene21376:intron |
| CTCCTTCTTGGTGATCACAC+TGG | 0.541831 | 1.4:-71626879 | MS.gene21376:CDS |
| GGTGATCACACTGGAGACTT+GGG | 0.548044 | 1.4:-71626870 | MS.gene21376:CDS |
| CTTGCTGCAATTCGTTCCGC+CGG | 0.555706 | 1.4:-71630597 | MS.gene21376:CDS |
| GTCTCTCATATGTGCTCAAG+TGG | 0.559631 | 1.4:-71626362 | MS.gene21376:CDS |
| GGTTCGGAATTGACGCTGGT+GGG | 0.566626 | 1.4:-71630645 | MS.gene21376:CDS |
| TAGGAGAAAATTCCAATGGA+TGG | 0.567633 | 1.4:+71629843 | None:intergenic |
| GGAGACTTGGGAATGTCTGA+TGG | 0.575829 | 1.4:-71626858 | MS.gene21376:CDS |
| TTACGATACTCGAATTTCTG+TGG | 0.585256 | 1.4:-71626829 | MS.gene21376:CDS |
| ATTGGGTTCGGAATTGACGC+TGG | 0.596990 | 1.4:-71630649 | MS.gene21376:CDS |
| AAAGGAAACTCATGGTAGAG+TGG | 0.614036 | 1.4:-71629802 | MS.gene21376:intron |
| TTCTCTTCCAGCCCAAGGGT+AGG | 0.615641 | 1.4:+71629824 | None:intergenic |
| CTCCAGTGTGATCACCAAGA+AGG | 0.618740 | 1.4:+71626877 | None:intergenic |
| CATGCTCTTCTTATTGAAGG+AGG | 0.621492 | 1.4:-71629552 | MS.gene21376:CDS |
| AGGGTAGGAGAAAATTCCAA+TGG | 0.624608 | 1.4:+71629839 | None:intergenic |
| GAATTGCAGCAAGTTTGCTG+TGG | 0.625675 | 1.4:+71630607 | None:intergenic |
| GGAAGAGAAAAGGAAACTCA+TGG | 0.628987 | 1.4:-71629810 | MS.gene21376:CDS |
| GCTTGCTGATATCATTGAAG+AGG | 0.634896 | 1.4:-71629252 | MS.gene21376:intron |
| AACAGGATGGTATTTAACAA+TGG | 0.634907 | 1.4:-71629060 | MS.gene21376:CDS |
| TGCAGAATGATGCGCCCATG+TGG | 0.644000 | 1.4:-71626400 | MS.gene21376:intron |
| ACTTTGATAACTTCCCACAT+GGG | 0.653578 | 1.4:+71626386 | None:intergenic |
| GAAGATAGTATCCAACAGGA+TGG | 0.654156 | 1.4:-71629073 | MS.gene21376:CDS |
| ATCACCAAGAAGGAGAACAT+TGG | 0.655582 | 1.4:+71626887 | None:intergenic |
| TCTCTCATATGTGCTCAAGT+GGG | 0.662286 | 1.4:-71626361 | MS.gene21376:CDS |
| GCAGAATGATGCGCCCATGT+GGG | 0.682785 | 1.4:-71626399 | MS.gene21376:intron |
| TAAGTGAGTTCTCAACGTTG+TGG | 0.688216 | 1.4:+71626662 | None:intergenic |
| CATGTGGGAAGTTATCAAAG+TGG | 0.709745 | 1.4:-71626384 | MS.gene21376:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAATCTTAGAATT+TGG | + | chr1.4:71626919-71626938 | None:intergenic | 10.0% |
| !! | AAATATAAATCTTAGAATTT+GGG | + | chr1.4:71626918-71626937 | None:intergenic | 10.0% |
| !! | ATAATAACTAAATTAATGTT+TGG | + | chr1.4:71630466-71630485 | None:intergenic | 10.0% |
| !!! | ATTTATATTTTCTTTTTTGT+AGG | - | chr1.4:71626928-71626947 | MS.gene21376:CDS | 10.0% |
| !! | AAAAATAACAAAATGGAAAA+TGG | + | chr1.4:71627708-71627727 | None:intergenic | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | + | chr1.4:71628835-71628854 | None:intergenic | 15.0% |
| !!! | TCATCTTAAGTTTTTATATT+CGG | + | chr1.4:71626796-71626815 | None:intergenic | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | - | chr1.4:71628834-71628853 | MS.gene21376:intron | 15.0% |
| !!! | TTGTATTCTGTTTTTTTTAT+GGG | - | chr1.4:71627296-71627315 | MS.gene21376:intron | 15.0% |
| !! | AAACTCAATTATCATTCAAA+TGG | + | chr1.4:71626477-71626496 | None:intergenic | 20.0% |
| !! | AACTCAATTATCATTCAAAT+GGG | + | chr1.4:71626476-71626495 | None:intergenic | 20.0% |
| !! | AATACACAATAAATGAAAGT+TGG | + | chr1.4:71628018-71628037 | None:intergenic | 20.0% |
| !! | ATATATTTGTCAAAGAAAGA+TGG | + | chr1.4:71627589-71627608 | None:intergenic | 20.0% |
| !! | ATGATCACATAATAAAATGA+TGG | + | chr1.4:71626538-71626557 | None:intergenic | 20.0% |
| !! | ATTGCATAATAACACAAAAT+TGG | - | chr1.4:71626567-71626586 | MS.gene21376:intron | 20.0% |
| !! | CATAATAATTAATTGCCTTT+AGG | - | chr1.4:71628097-71628116 | MS.gene21376:intron | 20.0% |
| !! | TAACTAAATTAATGTTTGGA+AGG | + | chr1.4:71630462-71630481 | None:intergenic | 20.0% |
| !! | TTAATTATTATGTAATTCCC+CGG | + | chr1.4:71628089-71628108 | None:intergenic | 20.0% |
| !! | TTGCATAATAACACAAAATT+GGG | - | chr1.4:71626568-71626587 | MS.gene21376:intron | 20.0% |
| !! | TTTCCTGAAAAATAACAAAA+TGG | + | chr1.4:71627715-71627734 | None:intergenic | 20.0% |
| !!! | AAGTCTATTTTGTTTTATGT+TGG | - | chr1.4:71627795-71627814 | MS.gene21376:intron | 20.0% |
| !!! | ATTTTGTATATGAGAAAACA+AGG | + | chr1.4:71629892-71629911 | None:intergenic | 20.0% |
| !!! | GTTGTATTCTGTTTTTTTTA+TGG | - | chr1.4:71627295-71627314 | MS.gene21376:intron | 20.0% |
| !!! | TATGCAAATATATTTTTCAG+AGG | - | chr1.4:71628063-71628082 | MS.gene21376:intron | 20.0% |
| !!! | TGATATGTTCATTTTATATC+AGG | - | chr1.4:71627621-71627640 | MS.gene21376:intron | 20.0% |
| !!! | TTAAGATTTGGTGTATTATT+AGG | - | chr1.4:71627431-71627450 | MS.gene21376:intron | 20.0% |
| !!! | TTTCCATTTTGTTATTTTTC+AGG | - | chr1.4:71627709-71627728 | MS.gene21376:intron | 20.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr1.4:71629578-71629597 | MS.gene21376:intron | 25.0% |
| ! | AAGCATTATTATATAGTCTC+AGG | + | chr1.4:71626661-71626680 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | + | chr1.4:71628828-71628847 | None:intergenic | 25.0% |
| ! | AATAGTCATGTAACATACTT+TGG | + | chr1.4:71627009-71627028 | None:intergenic | 25.0% |
| ! | AATTCCAATCTATAAGAACA+AGG | - | chr1.4:71628390-71628409 | MS.gene21376:intron | 25.0% |
| ! | ACCAGAAAAAAAATTAAGTC+AGG | + | chr1.4:71630316-71630335 | None:intergenic | 25.0% |
| ! | ACTCAATTATCATTCAAATG+GGG | + | chr1.4:71626475-71626494 | None:intergenic | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | + | chr1.4:71628827-71628846 | None:intergenic | 25.0% |
| ! | ATCACATAATAAAATGATGG+AGG | + | chr1.4:71626535-71626554 | None:intergenic | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+GGG | - | chr1.4:71628391-71628410 | MS.gene21376:intron | 25.0% |
| ! | ATTTAATTATGTTTAAGCCC+TGG | - | chr1.4:71629765-71629784 | MS.gene21376:intron | 25.0% |
| ! | CCAGAAAAAAAATTAAGTCA+GGG | + | chr1.4:71630315-71630334 | None:intergenic | 25.0% |
| ! | GAGAAGTAAAAATTAAGAAC+TGG | + | chr1.4:71629977-71629996 | None:intergenic | 25.0% |
| ! | GCAAGTTAAAATTAGATACT+CGG | + | chr1.4:71630587-71630606 | None:intergenic | 25.0% |
| ! | GTTCTATCAAATACCATATT+TGG | + | chr1.4:71629618-71629637 | None:intergenic | 25.0% |
| ! | GTTCTTATAGATTGGAATTA+AGG | + | chr1.4:71628389-71628408 | None:intergenic | 25.0% |
| ! | TAATGTCAATTGAATATCAC+TGG | + | chr1.4:71627394-71627413 | None:intergenic | 25.0% |
| ! | TATTTCTTATGTTAAGTACC+AGG | - | chr1.4:71630550-71630569 | MS.gene21376:intron | 25.0% |
| ! | TATTTGATAGAACATTATGG+CGG | - | chr1.4:71629625-71629644 | MS.gene21376:intron | 25.0% |
| ! | TCACCTTATACAAATCATAT+AGG | + | chr1.4:71630518-71630537 | None:intergenic | 25.0% |
| ! | TGGTATTTGATAGAACATTA+TGG | - | chr1.4:71629622-71629641 | MS.gene21376:intron | 25.0% |
| ! | TGTAAAATTGAGATACTAGT+GGG | - | chr1.4:71626710-71626729 | MS.gene21376:intron | 25.0% |
| ! | TTGTAAAATTGAGATACTAG+TGG | - | chr1.4:71626709-71626728 | MS.gene21376:intron | 25.0% |
| ! | TTTATTGTGTATTTGTTTGC+TGG | - | chr1.4:71628025-71628044 | MS.gene21376:intron | 25.0% |
| !! | ATTTCTCTTCATTTTCTTGT+CGG | - | chr1.4:71627832-71627851 | MS.gene21376:intron | 25.0% |
| !! | CTTCCTATATGATTTGTATA+AGG | - | chr1.4:71630512-71630531 | MS.gene21376:intron | 25.0% |
| !! | GTATCTCAATTTTACAAAAG+TGG | + | chr1.4:71626706-71626725 | None:intergenic | 25.0% |
| !! | TAATGCTAACATAGCTTTTA+GGG | - | chr1.4:71627522-71627541 | MS.gene21376:intron | 25.0% |
| !! | TACTATCTTCACATTTTTGA+AGG | + | chr1.4:71627935-71627954 | None:intergenic | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | + | chr1.4:71629571-71629590 | None:intergenic | 25.0% |
| !!! | AGCTTTTGATGTTGTTTTAA+TGG | - | chr1.4:71630392-71630411 | MS.gene21376:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr1.4:71629436-71629455 | MS.gene21376:intron | 25.0% |
| !!! | TATTTTGTTTTATGTTGGCA+AGG | - | chr1.4:71627800-71627819 | MS.gene21376:intron | 25.0% |
| !!! | TTAACAAAGTTTTGGGTTAA+TGG | - | chr1.4:71626974-71626993 | MS.gene21376:CDS | 25.0% |
| AAAACTTTGTCGAATCTTTC+AGG | + | chr1.4:71628280-71628299 | None:intergenic | 30.0% | |
| AACAGGATGGTATTTAACAA+TGG | - | chr1.4:71627958-71627977 | MS.gene21376:intron | 30.0% | |
| AACCCAAAACTTTGTTAATG+TGG | + | chr1.4:71626972-71626991 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | + | chr1.4:71629097-71629116 | None:intergenic | 30.0% | |
| ATATGAACATTACCATCCAT+TGG | - | chr1.4:71627163-71627182 | MS.gene21376:intron | 30.0% | |
| ATTAATGTTTGGAAGGAACA+AGG | + | chr1.4:71630455-71630474 | None:intergenic | 30.0% | |
| ATTGTTAAATACCATCCTGT+TGG | + | chr1.4:71627959-71627978 | None:intergenic | 30.0% | |
| CTCCAAAAATTCAAAAAGCT+CGG | + | chr1.4:71627557-71627576 | None:intergenic | 30.0% | |
| CTGTATTAATATTCTCTGCA+GGG | - | chr1.4:71627744-71627763 | MS.gene21376:intron | 30.0% | |
| GAGCTCAATTAATGTCTATA+AGG | - | chr1.4:71630268-71630287 | MS.gene21376:intron | 30.0% | |
| GTAACTAGTAAGTAAACTCT+GGG | + | chr1.4:71627342-71627361 | None:intergenic | 30.0% | |
| TAACTAGTAAGTAAACTCTG+GGG | + | chr1.4:71627341-71627360 | None:intergenic | 30.0% | |
| TATCTAATCGAGTCATTTGT+AGG | - | chr1.4:71627083-71627102 | MS.gene21376:intron | 30.0% | |
| TATTGTTATGGGAAAATCTC+CGG | + | chr1.4:71628785-71628804 | None:intergenic | 30.0% | |
| TCCAATATTAACAGGTTCTA+AGG | - | chr1.4:71627893-71627912 | MS.gene21376:intron | 30.0% | |
| TCCTACAAAACAGATTTGTA+AGG | + | chr1.4:71626882-71626901 | None:intergenic | 30.0% | |
| TGATGCTGTAACTTAAGATT+TGG | - | chr1.4:71627419-71627438 | MS.gene21376:intron | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | - | chr1.4:71629025-71629044 | MS.gene21376:intron | 30.0% | |
| TGTAACTAGTAAGTAAACTC+TGG | + | chr1.4:71627343-71627362 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | - | chr1.4:71629100-71629119 | MS.gene21376:CDS | 30.0% | |
| TTCCAATCTATAAGAACAAG+GGG | - | chr1.4:71628392-71628411 | MS.gene21376:intron | 30.0% | |
| ! | AAAAAAACCTGAAGCTTTTG+AGG | + | chr1.4:71626448-71626467 | None:intergenic | 30.0% |
| ! | AACTTTTCAACGAGATTATG+AGG | + | chr1.4:71628140-71628159 | None:intergenic | 30.0% |
| ! | ACCTTACAAATCTGTTTTGT+AGG | - | chr1.4:71626878-71626897 | MS.gene21376:CDS | 30.0% |
| ! | ATGCCACATTAACAAAGTTT+TGG | - | chr1.4:71626966-71626985 | MS.gene21376:CDS | 30.0% |
| ! | CACCTTTAAAAGATACAAGT+TGG | + | chr1.4:71627984-71628003 | None:intergenic | 30.0% |
| ! | CTAATGCTAACATAGCTTTT+AGG | - | chr1.4:71627521-71627540 | MS.gene21376:intron | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr1.4:71629583-71629602 | None:intergenic | 30.0% |
| ! | GTGTTTAAGAGTCTCATTTT+TGG | - | chr1.4:71626742-71626761 | MS.gene21376:intron | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | + | chr1.4:71629561-71629580 | None:intergenic | 30.0% |
| ! | TCCTAATTTTTGACGTGTAT+GGG | + | chr1.4:71627051-71627070 | None:intergenic | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr1.4:71629432-71629451 | None:intergenic | 30.0% |
| ! | TGCCACATTAACAAAGTTTT+GGG | - | chr1.4:71626967-71626986 | MS.gene21376:CDS | 30.0% |
| ! | TTCCGAGCTTTTTGAATTTT+TGG | - | chr1.4:71627552-71627571 | MS.gene21376:intron | 30.0% |
| ! | TTCCTAATTTTTGACGTGTA+TGG | + | chr1.4:71627052-71627071 | None:intergenic | 30.0% |
| !! | AAATATATTTTTCAGAGGCC+GGG | - | chr1.4:71628068-71628087 | MS.gene21376:intron | 30.0% |
| !! | AGATTTGGTGTATTATTAGG+TGG | - | chr1.4:71627434-71627453 | MS.gene21376:intron | 30.0% |
| !! | ATTTGGTGTATTATTAGGTG+GGG | - | chr1.4:71627436-71627455 | MS.gene21376:intron | 30.0% |
| !! | CAAATATATTTTTCAGAGGC+CGG | - | chr1.4:71628067-71628086 | MS.gene21376:intron | 30.0% |
| !! | CATTTTTGGAGGGTTTTTTT+GGG | - | chr1.4:71626756-71626775 | MS.gene21376:intron | 30.0% |
| !! | GATTTGGTGTATTATTAGGT+GGG | - | chr1.4:71627435-71627454 | MS.gene21376:intron | 30.0% |
| !! | GCACTTAGTTTTCATTGATT+TGG | - | chr1.4:71628621-71628640 | MS.gene21376:intron | 30.0% |
| !! | TACTTCTCAATTTTGATCAC+AGG | - | chr1.4:71629989-71630008 | MS.gene21376:intron | 30.0% |
| !! | TCATTTTTGGAGGGTTTTTT+TGG | - | chr1.4:71626755-71626774 | MS.gene21376:intron | 30.0% |
| !! | TTAAGAGTCTCATTTTTGGA+GGG | - | chr1.4:71626746-71626765 | MS.gene21376:intron | 30.0% |
| !! | TTAATGGTAAGTTGATTAGC+TGG | - | chr1.4:71630408-71630427 | MS.gene21376:intron | 30.0% |
| !! | TTTAAGAGTCTCATTTTTGG+AGG | - | chr1.4:71626745-71626764 | MS.gene21376:intron | 30.0% |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | - | chr1.4:71628627-71628646 | MS.gene21376:intron | 30.0% |
| !!! | CCCTGACTTAATTTTTTTTC+TGG | - | chr1.4:71630312-71630331 | MS.gene21376:intron | 30.0% |
| !!! | TCGCTTTTTCCAATATTAAC+AGG | - | chr1.4:71627885-71627904 | MS.gene21376:intron | 30.0% |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | - | chr1.4:71628846-71628865 | MS.gene21376:intron | 30.0% |
| AAATCACAGCAATTAGAGTC+TGG | + | chr1.4:71630238-71630257 | None:intergenic | 35.0% | |
| AAATGAGCATGCTCTTGATA+TGG | - | chr1.4:71630036-71630055 | MS.gene21376:CDS | 35.0% | |
| AACTAGTAAGTAAACTCTGG+GGG | + | chr1.4:71627340-71627359 | None:intergenic | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | - | chr1.4:71629033-71629052 | MS.gene21376:intron | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr1.4:71629234-71629253 | None:intergenic | 35.0% | |
| AAGAAAAGAGACTCACGTTA+CGG | - | chr1.4:71628501-71628520 | MS.gene21376:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr1.4:71629506-71629525 | MS.gene21376:CDS | 35.0% | |
| ACAAGATTGCGCGAATTATA+GGG | - | chr1.4:71628420-71628439 | MS.gene21376:intron | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | - | chr1.4:71629034-71629053 | MS.gene21376:intron | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | chr1.4:71629373-71629392 | MS.gene21376:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr1.4:71629590-71629609 | MS.gene21376:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr1.4:71629425-71629444 | MS.gene21376:intron | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr1.4:71629238-71629257 | MS.gene21376:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | - | chr1.4:71629085-71629104 | MS.gene21376:CDS | 35.0% | |
| ATCCAGAATATGATGCCAAA+AGG | - | chr1.4:71627132-71627151 | MS.gene21376:intron | 35.0% | |
| ATGTGAAGATAGTATCCAAC+AGG | - | chr1.4:71627941-71627960 | MS.gene21376:intron | 35.0% | |
| CCTGCAGAGAATATTAATAC+AGG | + | chr1.4:71627746-71627765 | None:intergenic | 35.0% | |
| CCTGTATTAATATTCTCTGC+AGG | - | chr1.4:71627743-71627762 | MS.gene21376:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr1.4:71629450-71629469 | MS.gene21376:intron | 35.0% | |
| GAATTACCAGTGAAACCTAA+AGG | + | chr1.4:71628115-71628134 | None:intergenic | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | - | chr1.4:71628456-71628475 | MS.gene21376:intron | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | + | chr1.4:71629098-71629117 | None:intergenic | 35.0% | |
| GCCTTAGAACCTGTTAATAT+TGG | + | chr1.4:71627897-71627916 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr1.4:71629503-71629522 | MS.gene21376:CDS | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | - | chr1.4:71629099-71629118 | MS.gene21376:CDS | 35.0% | |
| TACAAGATTGCGCGAATTAT+AGG | - | chr1.4:71628419-71628438 | MS.gene21376:intron | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | - | chr1.4:71629160-71629179 | MS.gene21376:intron | 35.0% | |
| TACGATACTCGAATTTCTGT+GGG | - | chr1.4:71630190-71630209 | MS.gene21376:intron | 35.0% | |
| TAGAAACAAGACGGAGTATA+TGG | - | chr1.4:71629005-71629024 | MS.gene21376:intron | 35.0% | |
| TAGGAGAAAATTCCAATGGA+TGG | + | chr1.4:71627178-71627197 | None:intergenic | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | + | chr1.4:71629096-71629115 | None:intergenic | 35.0% | |
| TATGTTAAGTACCAGGTGAA+GGG | - | chr1.4:71630557-71630576 | MS.gene21376:intron | 35.0% | |
| TCCAATCTATAAGAACAAGG+GGG | - | chr1.4:71628393-71628412 | MS.gene21376:intron | 35.0% | |
| TCCCATACACGTCAAAAATT+AGG | - | chr1.4:71627047-71627066 | MS.gene21376:intron | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | - | chr1.4:71628455-71628474 | MS.gene21376:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr1.4:71629445-71629464 | MS.gene21376:intron | 35.0% | |
| TTACGATACTCGAATTTCTG+TGG | - | chr1.4:71630189-71630208 | MS.gene21376:intron | 35.0% | |
| TTATGTTAAGTACCAGGTGA+AGG | - | chr1.4:71630556-71630575 | MS.gene21376:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr1.4:71629502-71629521 | None:intergenic | 35.0% | |
| ! | ACTTTGATAACTTCCCACAT+GGG | + | chr1.4:71630635-71630654 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr1.4:71629602-71629621 | MS.gene21376:intron | 35.0% |
| ! | CAATGCTGGTCTACATATAT+AGG | - | chr1.4:71627256-71627275 | MS.gene21376:intron | 35.0% |
| ! | GATTCGACAAAGTTTTACGT+TGG | - | chr1.4:71628284-71628303 | MS.gene21376:intron | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | - | chr1.4:71628784-71628803 | MS.gene21376:intron | 35.0% |
| ! | GGCCAACTTGTATCTTTTAA+AGG | - | chr1.4:71627979-71627998 | MS.gene21376:intron | 35.0% |
| ! | GTTGTTGTTGTTGTTGTTGT+AGG | - | chr1.4:71629692-71629711 | MS.gene21376:intron | 35.0% |
| ! | TAATTGCCTTTAGGTTTCAC+TGG | - | chr1.4:71628106-71628125 | MS.gene21376:intron | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | + | chr1.4:71628892-71628911 | None:intergenic | 35.0% |
| ! | TTCATATAACTGCTGCCTTT+TGG | + | chr1.4:71627150-71627169 | None:intergenic | 35.0% |
| !! | AATATATTTTTCAGAGGCCG+GGG | - | chr1.4:71628069-71628088 | MS.gene21376:intron | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | + | chr1.4:71628716-71628735 | None:intergenic | 35.0% |
| !! | CGAGCTTTTTGAATTTTTGG+AGG | - | chr1.4:71627555-71627574 | MS.gene21376:intron | 35.0% |
| !! | CTGGTATTTTGAATTGTTGC+AGG | - | chr1.4:71630331-71630350 | MS.gene21376:intron | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | + | chr1.4:71629127-71629146 | None:intergenic | 35.0% |
| !!! | AACCAATTTGGTTTTATGCC+TGG | - | chr1.4:71628526-71628545 | MS.gene21376:intron | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+GGG | - | chr1.4:71628527-71628546 | MS.gene21376:intron | 35.0% |
| AAAATGGAGAGGGTTGTGTT+AGG | + | chr1.4:71628319-71628338 | None:intergenic | 40.0% | |
| AAAGGAAACTCATGGTAGAG+TGG | - | chr1.4:71627216-71627235 | MS.gene21376:intron | 40.0% | |
| ACAACATACCTATCGAAGTG+TGG | + | chr1.4:71628200-71628219 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | - | chr1.4:71629400-71629419 | MS.gene21376:intron | 40.0% | |
| ACGCATGCTCTTCTTATTGA+AGG | - | chr1.4:71627463-71627482 | MS.gene21376:intron | 40.0% | |
| ACTTCGATAGGTATGTTGTC+CGG | - | chr1.4:71628201-71628220 | MS.gene21376:intron | 40.0% | |
| AGAACCAATGTTCTCCTTCT+TGG | - | chr1.4:71630127-71630146 | MS.gene21376:intron | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | - | chr1.4:71628723-71628742 | MS.gene21376:intron | 40.0% | |
| AGGGTAGGAGAAAATTCCAA+TGG | + | chr1.4:71627182-71627201 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr1.4:71629531-71629550 | MS.gene21376:CDS | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | - | chr1.4:71628796-71628815 | MS.gene21376:intron | 40.0% | |
| ATACCATGAAGTTATGGGAG+AGG | - | chr1.4:71628461-71628480 | MS.gene21376:intron | 40.0% | |
| ATCACCAAGAAGGAGAACAT+TGG | + | chr1.4:71630134-71630153 | None:intergenic | 40.0% | |
| ATCGAAGTGTGGAAAAGTCT+TGG | + | chr1.4:71628189-71628208 | None:intergenic | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | + | chr1.4:71629064-71629083 | None:intergenic | 40.0% | |
| ATGTTAAGTACCAGGTGAAG+GGG | - | chr1.4:71630558-71630577 | MS.gene21376:intron | 40.0% | |
| ATTGAATATCACTGGACCTC+TGG | + | chr1.4:71627386-71627405 | None:intergenic | 40.0% | |
| CAAGATTGCGCGAATTATAG+GGG | - | chr1.4:71628421-71628440 | MS.gene21376:intron | 40.0% | |
| CACGTTACGGATAACCAATT+TGG | - | chr1.4:71628514-71628533 | MS.gene21376:intron | 40.0% | |
| CATGCTCTTCTTATTGAAGG+AGG | - | chr1.4:71627466-71627485 | MS.gene21376:intron | 40.0% | |
| CATGTGGGAAGTTATCAAAG+TGG | - | chr1.4:71630634-71630653 | MS.gene21376:CDS | 40.0% | |
| CTTGAGCAAGTCATTGTCAT+CGG | + | chr1.4:71630104-71630123 | None:intergenic | 40.0% | |
| GAAAAGGATGAGTAATGGCA+AGG | + | chr1.4:71628235-71628254 | None:intergenic | 40.0% | |
| GAAGATAGTATCCAACAGGA+TGG | - | chr1.4:71627945-71627964 | MS.gene21376:intron | 40.0% | |
| GAAGATTCGATTGCTGACAT+TGG | - | chr1.4:71627673-71627692 | MS.gene21376:intron | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | - | chr1.4:71629399-71629418 | MS.gene21376:intron | 40.0% | |
| GCGTTGAAAAGGATGAGTAA+TGG | + | chr1.4:71628240-71628259 | None:intergenic | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | - | chr1.4:71628724-71628743 | MS.gene21376:intron | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | + | chr1.4:71628667-71628686 | None:intergenic | 40.0% | |
| GGAAGAGAAAAGGAAACTCA+TGG | - | chr1.4:71627208-71627227 | MS.gene21376:intron | 40.0% | |
| GGAGGATATCAAATTGGGTT+CGG | - | chr1.4:71626357-71626376 | MS.gene21376:CDS | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | - | chr1.4:71629120-71629139 | MS.gene21376:intron | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | - | chr1.4:71629159-71629178 | MS.gene21376:intron | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | chr1.4:71629367-71629386 | MS.gene21376:intron | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | - | chr1.4:71628797-71628816 | MS.gene21376:intron | 40.0% | |
| TAAGTGAGTTCTCAACGTTG+TGG | + | chr1.4:71630359-71630378 | None:intergenic | 40.0% | |
| TACCATGAAGTTATGGGAGA+GGG | - | chr1.4:71628462-71628481 | MS.gene21376:intron | 40.0% | |
| TCCCAGGCATAAAACCAAAT+TGG | + | chr1.4:71628531-71628550 | None:intergenic | 40.0% | |
| TCCCCCTTGTTCTTATAGAT+TGG | + | chr1.4:71628397-71628416 | None:intergenic | 40.0% | |
| TCGATTGCTGACATTGGATT+TGG | - | chr1.4:71627679-71627698 | MS.gene21376:intron | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | - | chr1.4:71629057-71629076 | MS.gene21376:CDS | 40.0% | |
| TCTCTCATATGTGCTCAAGT+GGG | - | chr1.4:71630657-71630676 | MS.gene21376:CDS | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | - | chr1.4:71629398-71629417 | MS.gene21376:intron | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | - | chr1.4:71628711-71628730 | MS.gene21376:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | + | chr1.4:71628796-71628815 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | + | chr1.4:71628797-71628816 | None:intergenic | 40.0% | |
| ! | AAGGTACCACTTAAGCTGAA+AGG | - | chr1.4:71629225-71629244 | MS.gene21376:intron | 40.0% |
| ! | AGACTTTTCCACACTTCGAT+AGG | - | chr1.4:71628189-71628208 | MS.gene21376:intron | 40.0% |
| ! | CACTTTGATAACTTCCCACA+TGG | + | chr1.4:71630636-71630655 | None:intergenic | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | - | chr1.4:71628659-71628678 | MS.gene21376:intron | 40.0% |
| ! | GCTTGCTGATATCATTGAAG+AGG | - | chr1.4:71627766-71627785 | MS.gene21376:intron | 40.0% |
| ! | GTTGTTGTTGTAGGTTTCAC+TGG | - | chr1.4:71629704-71629723 | MS.gene21376:intron | 40.0% |
| ! | TGCCTTTTGGCATCATATTC+TGG | + | chr1.4:71627137-71627156 | None:intergenic | 40.0% |
| ! | TGGAATTTTCTCCTACCCTT+GGG | - | chr1.4:71627183-71627202 | MS.gene21376:intron | 40.0% |
| ! | TTGGAATTTTCTCCTACCCT+TGG | - | chr1.4:71627182-71627201 | MS.gene21376:intron | 40.0% |
| !! | AGGTGAAAGAAGCGTTGAAA+AGG | + | chr1.4:71628251-71628270 | None:intergenic | 40.0% |
| !! | GAACGATTCGGTGATATTGA+TGG | - | chr1.4:71630073-71630092 | MS.gene21376:intron | 40.0% |
| !! | GCTAACATAGCTTTTAGGGA+AGG | - | chr1.4:71627526-71627545 | MS.gene21376:intron | 40.0% |
| !! | TGGTAAGTTGATTAGCTGGA+TGG | - | chr1.4:71630412-71630431 | MS.gene21376:intron | 40.0% |
| !!! | AATTTGGTTTTATGCCTGGG+AGG | - | chr1.4:71628530-71628549 | MS.gene21376:intron | 40.0% |
| !!! | TTTGGAGGGTTTTTTTGGGA+GGG | - | chr1.4:71626760-71626779 | MS.gene21376:intron | 40.0% |
| !!! | TTTTGGAGGGTTTTTTTGGG+AGG | - | chr1.4:71626759-71626778 | MS.gene21376:intron | 40.0% |
| !!! | TTTTGGGTTAATGGAACTCG+CGG | - | chr1.4:71626983-71627002 | MS.gene21376:CDS | 40.0% |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr1.4:71629272-71629291 | MS.gene21376:CDS | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr1.4:71629515-71629534 | MS.gene21376:CDS | 45.0% | |
| AGCAAGTCATTGTCATCGGT+TGG | + | chr1.4:71630100-71630119 | None:intergenic | 45.0% | |
| AGGTGTGTTGTGCGATAAGA+AGG | - | chr1.4:71629206-71629225 | MS.gene21376:intron | 45.0% | |
| AGTCGAGGGAGGAGTTAAAT+GGG | - | chr1.4:71628932-71628951 | MS.gene21376:intron | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr1.4:71629163-71629182 | MS.gene21376:intron | 45.0% | |
| ATGAGTAATGGCAAGGCAGT+TGG | + | chr1.4:71628228-71628247 | None:intergenic | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | - | chr1.4:71629401-71629420 | MS.gene21376:intron | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr1.4:71629320-71629339 | MS.gene21376:intron | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr1.4:71629317-71629336 | None:intergenic | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr1.4:71629525-71629544 | MS.gene21376:CDS | 45.0% | |
| GAGTCATTTGTAGGCAGTCA+TGG | - | chr1.4:71627092-71627111 | MS.gene21376:intron | 45.0% | |
| GAGTGTGACTCGATTGATCT+TGG | + | chr1.4:71626832-71626851 | None:intergenic | 45.0% | |
| GCTGGATGGTAACACATCTT+TGG | - | chr1.4:71630426-71630445 | MS.gene21376:intron | 45.0% | |
| GTCTCTCATATGTGCTCAAG+TGG | - | chr1.4:71630656-71630675 | MS.gene21376:CDS | 45.0% | |
| TAAATGGGAGGCTAGAGACT+TGG | - | chr1.4:71628947-71628966 | MS.gene21376:intron | 45.0% | |
| TACCCTCTCCCATAACTTCA+TGG | + | chr1.4:71628467-71628486 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr1.4:71629276-71629295 | None:intergenic | 45.0% | |
| TGAGTAATGGCAAGGCAGTT+GGG | + | chr1.4:71628227-71628246 | None:intergenic | 45.0% | |
| TGGAAAAGTCTTGGCGATAG+AGG | + | chr1.4:71628180-71628199 | None:intergenic | 45.0% | |
| TGGTAGAGTGGTATGTGCTT+CGG | - | chr1.4:71627228-71627247 | MS.gene21376:intron | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr1.4:71629280-71629299 | MS.gene21376:CDS | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr1.4:71629172-71629191 | MS.gene21376:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr1.4:71629186-71629205 | MS.gene21376:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1.4:71629671-71629690 | None:intergenic | 45.0% |
| ! | ACAACCCTCTCCATTTTACC+CGG | - | chr1.4:71628322-71628341 | MS.gene21376:intron | 45.0% |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | - | chr1.4:71628669-71628688 | MS.gene21376:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1.4:71629672-71629691 | None:intergenic | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | - | chr1.4:71628907-71628926 | MS.gene21376:intron | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr1.4:71629281-71629300 | MS.gene21376:CDS | 45.0% |
| ! | TCACACATTTTGTGCACCAG+AGG | - | chr1.4:71627367-71627386 | MS.gene21376:intron | 45.0% |
| !! | AACCTGAAGCTTTTGAGGAC+CGG | + | chr1.4:71626443-71626462 | None:intergenic | 45.0% |
| !! | AAGTTTTACGTTGGCTGTCG+AGG | - | chr1.4:71628293-71628312 | MS.gene21376:intron | 45.0% |
| !! | ACGTGTATGGGAGCATTAGA+GGG | + | chr1.4:71627039-71627058 | None:intergenic | 45.0% |
| !! | ACTCCGTCTTGTTTCTACTC+AGG | + | chr1.4:71629002-71629021 | None:intergenic | 45.0% |
| !! | AGTTTGCTGTGGAGCAAAAC+AGG | + | chr1.4:71626403-71626422 | None:intergenic | 45.0% |
| !! | GAATTGCAGCAAGTTTGCTG+TGG | + | chr1.4:71626414-71626433 | None:intergenic | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | + | chr1.4:71628879-71628898 | None:intergenic | 45.0% |
| !! | TTTTTCAGACTCACTCGCCA+GGG | + | chr1.4:71629785-71629804 | None:intergenic | 45.0% |
| !!! | TTTTTTCAGACTCACTCGCC+AGG | + | chr1.4:71629786-71629805 | None:intergenic | 45.0% |
| AAGCCCGGGTAAAATGGAGA+GGG | + | chr1.4:71628329-71628348 | None:intergenic | 50.0% | |
| AAGCGCCCTCATACATATCC+TGG | + | chr1.4:71628732-71628751 | None:intergenic | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | + | chr1.4:71628816-71628835 | None:intergenic | 50.0% | |
| ACACTCCAAATGTGCAGTGG+TGG | - | chr1.4:71626846-71626865 | MS.gene21376:CDS | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr1.4:71629348-71629367 | MS.gene21376:intron | 50.0% | |
| AGTCTTGGCGATAGAGGAGT+TGG | + | chr1.4:71628174-71628193 | None:intergenic | 50.0% | |
| ATTGGGTTCGGAATTGACGC+TGG | - | chr1.4:71626369-71626388 | MS.gene21376:CDS | 50.0% | |
| CACTCCAAATGTGCAGTGGT+GGG | - | chr1.4:71626847-71626866 | MS.gene21376:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1.4:71629670-71629689 | MS.gene21376:intron | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | - | chr1.4:71628996-71629015 | MS.gene21376:intron | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | - | chr1.4:71628570-71628589 | MS.gene21376:intron | 50.0% | |
| CTCCAGTGTGATCACCAAGA+AGG | + | chr1.4:71630144-71630163 | None:intergenic | 50.0% | |
| CTGGATTACCCTGCTGCAAA+AGG | + | chr1.4:71627118-71627137 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr1.4:71629667-71629686 | None:intergenic | 50.0% | |
| CTTATCGCACAACACACCTG+AGG | + | chr1.4:71629205-71629224 | None:intergenic | 50.0% | |
| CTTCTTACCACGGCGTCTAT+TGG | + | chr1.4:71629492-71629511 | None:intergenic | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | - | chr1.4:71628681-71628700 | MS.gene21376:intron | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | - | chr1.4:71629047-71629066 | MS.gene21376:CDS | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+TGG | - | chr1.4:71628931-71628950 | MS.gene21376:intron | 50.0% | |
| GCGGAAACCATACGCTTCTA+AGG | + | chr1.4:71628980-71628999 | None:intergenic | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | - | chr1.4:71628680-71628699 | MS.gene21376:intron | 50.0% | |
| GGAGACTTGGGAATGTCTGA+TGG | - | chr1.4:71630160-71630179 | MS.gene21376:intron | 50.0% | |
| GGTGATCACACTGGAGACTT+GGG | - | chr1.4:71630148-71630167 | MS.gene21376:intron | 50.0% | |
| GTCACACTCCAAATGTGCAG+TGG | - | chr1.4:71626843-71626862 | MS.gene21376:CDS | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr1.4:71629267-71629286 | MS.gene21376:CDS | 50.0% | |
| GTCTTGGCGATAGAGGAGTT+GGG | + | chr1.4:71628173-71628192 | None:intergenic | 50.0% | |
| GTGCTTCGGTTTCTCAATGC+TGG | - | chr1.4:71627242-71627261 | MS.gene21376:intron | 50.0% | |
| TCACCGAATCGTTCGTGAAC+AGG | + | chr1.4:71630067-71630086 | None:intergenic | 50.0% | |
| TGCTTCTTCTCCACTCGTGA+TGG | + | chr1.4:71628366-71628385 | None:intergenic | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | - | chr1.4:71628679-71628698 | MS.gene21376:intron | 50.0% | |
| TGGTGATCACACTGGAGACT+TGG | - | chr1.4:71630147-71630166 | MS.gene21376:intron | 50.0% | |
| TTAAGTACCAGGTGAAGGGG+TGG | - | chr1.4:71630561-71630580 | MS.gene21376:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr1.4:71629328-71629347 | MS.gene21376:intron | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+TGG | - | chr1.4:71628970-71628989 | MS.gene21376:intron | 50.0% |
| ! | AGTCATGGCCTTTTGCAGCA+GGG | - | chr1.4:71627107-71627126 | MS.gene21376:intron | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | - | chr1.4:71628918-71628937 | MS.gene21376:intron | 50.0% |
| ! | ATTTTCTCCTACCCTTGGGC+TGG | - | chr1.4:71627187-71627206 | MS.gene21376:intron | 50.0% |
| ! | CAACCCTCTCCATTTTACCC+GGG | - | chr1.4:71628323-71628342 | MS.gene21376:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1.4:71629673-71629692 | None:intergenic | 50.0% |
| ! | CCTTTTCTCTTCCAGCCCAA+GGG | + | chr1.4:71627201-71627220 | None:intergenic | 50.0% |
| ! | CTCCTTCTTGGTGATCACAC+TGG | - | chr1.4:71630139-71630158 | MS.gene21376:intron | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | - | chr1.4:71628917-71628936 | MS.gene21376:intron | 50.0% |
| ! | TCCTTTTCTCTTCCAGCCCA+AGG | + | chr1.4:71627202-71627221 | None:intergenic | 50.0% |
| ! | TCGAATCTTTCAGGAGCACG+AGG | + | chr1.4:71628271-71628290 | None:intergenic | 50.0% |
| ! | TCTCCATTTTACCCGGGCTT+GGG | - | chr1.4:71628329-71628348 | MS.gene21376:intron | 50.0% |
| ! | TTCTCCACTCGTGATGGAGA+AGG | + | chr1.4:71628360-71628379 | None:intergenic | 50.0% |
| ! | TTGAGATACTAGTGGGCGTG+AGG | - | chr1.4:71626717-71626736 | MS.gene21376:intron | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | + | chr1.4:71628999-71629018 | None:intergenic | 50.0% |
| !! | CGTGTATGGGAGCATTAGAG+GGG | + | chr1.4:71627038-71627057 | None:intergenic | 50.0% |
| !! | GACGTGTATGGGAGCATTAG+AGG | + | chr1.4:71627040-71627059 | None:intergenic | 50.0% |
| ACATGGGCGCATCATTCTGC+AGG | + | chr1.4:71630619-71630638 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr1.4:71629659-71629678 | None:intergenic | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | - | chr1.4:71628754-71628773 | MS.gene21376:intron | 55.0% | |
| ACTGCCCACCACTGCACATT+TGG | + | chr1.4:71626854-71626873 | None:intergenic | 55.0% | |
| ATGGGAGGCTAGAGACTTGG+AGG | - | chr1.4:71628950-71628969 | MS.gene21376:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr1.4:71629658-71629677 | MS.gene21376:intron | 55.0% | |
| CAAGCCCGGGTAAAATGGAG+AGG | + | chr1.4:71628330-71628349 | None:intergenic | 55.0% | |
| CATGGGCGCATCATTCTGCA+GGG | + | chr1.4:71630618-71630637 | None:intergenic | 55.0% | |
| CCTCACCCCTTTCTTCTCCA+GGG | + | chr1.4:71628689-71628708 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1.4:71629665-71629684 | MS.gene21376:intron | 55.0% | |
| CGAGGGAGGAGTTAAATGGG+AGG | - | chr1.4:71628935-71628954 | MS.gene21376:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr1.4:71629340-71629359 | MS.gene21376:intron | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | - | chr1.4:71628755-71628774 | MS.gene21376:intron | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr1.4:71629254-71629273 | MS.gene21376:CDS | 55.0% | |
| CTTGCTGCAATTCGTTCCGC+CGG | - | chr1.4:71626421-71626440 | MS.gene21376:intron | 55.0% | |
| GAGAAGACCAATAGACGCCG+TGG | - | chr1.4:71629482-71629501 | MS.gene21376:CDS | 55.0% | |
| GCAGAATGATGCGCCCATGT+GGG | - | chr1.4:71630619-71630638 | MS.gene21376:CDS | 55.0% | |
| GCGCCTGTTCACGAACGATT+CGG | - | chr1.4:71630061-71630080 | MS.gene21376:CDS | 55.0% | |
| GGTTCGGAATTGACGCTGGT+GGG | - | chr1.4:71626373-71626392 | MS.gene21376:CDS | 55.0% | |
| TAATGGCAAGGCAGTTGGGC+CGG | + | chr1.4:71628223-71628242 | None:intergenic | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | - | chr1.4:71628756-71628775 | MS.gene21376:intron | 55.0% | |
| TATGCCTGGGAGGTCGACTA+TGG | - | chr1.4:71628540-71628559 | MS.gene21376:intron | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | + | chr1.4:71628690-71628709 | None:intergenic | 55.0% | |
| TGCAGAATGATGCGCCCATG+TGG | - | chr1.4:71630618-71630637 | MS.gene21376:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr1.4:71629659-71629678 | MS.gene21376:intron | 55.0% | |
| TTCGACTAGTGTGAGGACGC+AGG | - | chr1.4:71628750-71628769 | MS.gene21376:intron | 55.0% | |
| TTCTCTTCCAGCCCAAGGGT+AGG | + | chr1.4:71627197-71627216 | None:intergenic | 55.0% | |
| TTGGCGATAGAGGAGTTGGG+TGG | + | chr1.4:71628170-71628189 | None:intergenic | 55.0% | |
| ! | AGATACTAGTGGGCGTGAGG+TGG | - | chr1.4:71626720-71626739 | MS.gene21376:intron | 55.0% |
| ! | ATTTTACCCGGGCTTGGGAC+CGG | - | chr1.4:71628334-71628353 | MS.gene21376:intron | 55.0% |
| ! | CAGTCATGGCCTTTTGCAGC+AGG | - | chr1.4:71627106-71627125 | MS.gene21376:intron | 55.0% |
| ! | CCCTTGGGCTGGAAGAGAAA+AGG | - | chr1.4:71627198-71627217 | MS.gene21376:intron | 55.0% |
| ! | CGTGATGGAGCGATATCGGA+CGG | - | chr1.4:71628585-71628604 | MS.gene21376:intron | 55.0% |
| ! | CTCTCCATTTTACCCGGGCT+TGG | - | chr1.4:71628328-71628347 | MS.gene21376:intron | 55.0% |
| ! | GACGCGTGATGGAGCGATAT+CGG | - | chr1.4:71628581-71628600 | MS.gene21376:intron | 55.0% |
| !! | CTGAAGCTTTTGAGGACCGG+CGG | + | chr1.4:71626440-71626459 | None:intergenic | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | chr1.4:71629284-71629303 | MS.gene21376:CDS | 55.0% |
| AGGACGCAGGATGGGGATAC+CGG | - | chr1.4:71628763-71628782 | MS.gene21376:intron | 60.0% | |
| CCCTGGAGAAGAAAGGGGTG+AGG | - | chr1.4:71628686-71628705 | MS.gene21376:intron | 60.0% | |
| CGCCGGTCCTCAAAAGCTTC+AGG | - | chr1.4:71626438-71626457 | MS.gene21376:intron | 60.0% | |
| GCTTCCATAGTCGACCTCCC+AGG | + | chr1.4:71628547-71628566 | None:intergenic | 60.0% | |
| GGGTTCGGAATTGACGCTGG+TGG | - | chr1.4:71626372-71626391 | MS.gene21376:CDS | 60.0% | |
| GGTCCCAAGCCCGGGTAAAA+TGG | + | chr1.4:71628335-71628354 | None:intergenic | 60.0% | |
| ! | AGGGCGCTTCGACTAGTGTG+AGG | - | chr1.4:71628743-71628762 | MS.gene21376:intron | 60.0% |
| ! | CCACTCGTGATGGAGAAGGC+CGG | + | chr1.4:71628356-71628375 | None:intergenic | 60.0% |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | - | chr1.4:71628921-71628940 | MS.gene21376:intron | 60.0% |
| CCGGCCTTCTCCATCACGAG+TGG | - | chr1.4:71628353-71628372 | MS.gene21376:intron | 65.0% | |
| TACTCGGCCACCCCTTCACC+TGG | + | chr1.4:71630571-71630590 | None:intergenic | 65.0% | |
| AGAAGGCCGGTCCCAAGCCC+GGG | + | chr1.4:71628343-71628362 | None:intergenic | 70.0% | |
| GAGAAGGCCGGTCCCAAGCC+CGG | + | chr1.4:71628344-71628363 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 71626355 | 71630685 | 71626355 | ID=MS.gene21376 |
| chr1.4 | mRNA | 71626355 | 71630685 | 71626355 | ID=MS.gene21376.t1;Parent=MS.gene21376 |
| chr1.4 | exon | 71630581 | 71630685 | 71630581 | ID=MS.gene21376.t1.exon1;Parent=MS.gene21376.t1 |
| chr1.4 | CDS | 71630581 | 71630685 | 71630581 | ID=cds.MS.gene21376.t1;Parent=MS.gene21376.t1 |
| chr1.4 | exon | 71630030 | 71630090 | 71630030 | ID=MS.gene21376.t1.exon2;Parent=MS.gene21376.t1 |
| chr1.4 | CDS | 71630030 | 71630090 | 71630030 | ID=cds.MS.gene21376.t1;Parent=MS.gene21376.t1 |
| chr1.4 | exon | 71629803 | 71629935 | 71629803 | ID=MS.gene21376.t1.exon3;Parent=MS.gene21376.t1 |
| chr1.4 | CDS | 71629803 | 71629935 | 71629803 | ID=cds.MS.gene21376.t1;Parent=MS.gene21376.t1 |
| chr1.4 | exon | 71629464 | 71629587 | 71629464 | ID=MS.gene21376.t1.exon4;Parent=MS.gene21376.t1 |
| chr1.4 | CDS | 71629464 | 71629587 | 71629464 | ID=cds.MS.gene21376.t1;Parent=MS.gene21376.t1 |
| chr1.4 | exon | 71629253 | 71629309 | 71629253 | ID=MS.gene21376.t1.exon5;Parent=MS.gene21376.t1 |
| chr1.4 | CDS | 71629253 | 71629309 | 71629253 | ID=cds.MS.gene21376.t1;Parent=MS.gene21376.t1 |
| chr1.4 | exon | 71629040 | 71629133 | 71629040 | ID=MS.gene21376.t1.exon6;Parent=MS.gene21376.t1 |
| chr1.4 | CDS | 71629040 | 71629133 | 71629040 | ID=cds.MS.gene21376.t1;Parent=MS.gene21376.t1 |
| chr1.4 | exon | 71626822 | 71627029 | 71626822 | ID=MS.gene21376.t1.exon7;Parent=MS.gene21376.t1 |
| chr1.4 | CDS | 71626822 | 71627029 | 71626822 | ID=cds.MS.gene21376.t1;Parent=MS.gene21376.t1 |
| chr1.4 | exon | 71626627 | 71626687 | 71626627 | ID=MS.gene21376.t1.exon8;Parent=MS.gene21376.t1 |
| chr1.4 | CDS | 71626627 | 71626687 | 71626627 | ID=cds.MS.gene21376.t1;Parent=MS.gene21376.t1 |
| chr1.4 | exon | 71626355 | 71626417 | 71626355 | ID=MS.gene21376.t1.exon9;Parent=MS.gene21376.t1 |
| chr1.4 | CDS | 71626355 | 71626417 | 71626355 | ID=cds.MS.gene21376.t1;Parent=MS.gene21376.t1 |
| Gene Sequence |
| Protein sequence |
