AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22519

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22519.t1 MTR_2g040570 97.436 117 1 2 2 116 1 117 6.18e-78 230
MS.gene22519.t1 MTR_1g100673 54.688 192 81 2 17 202 7 198 1.49e-74 223
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22519.t1 AT4G29820 67.619 210 61 3 2 204 13 222 1.48e-103 298
MS.gene22519.t1 AT4G25550 53.646 192 83 2 17 202 7 198 1.14e-73 221

Find 52 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTGAATTCTTACTATTT+TGG 0.085732 2.2:+47351960 MS.gene22519:CDS
AACTTCCTGGTGGCCGTTTA+AGG 0.136887 2.2:+47353508 MS.gene22519:CDS
CCTTGTGATTGTCACGAATT+TGG 0.184356 2.2:-47357617 None:intergenic
GCTTTCTGCTGATGAAAATT+TGG 0.226769 2.2:+47353678 MS.gene22519:CDS
ACCGTGAACCTTCGACTTTC+TGG 0.232290 2.2:-47357558 None:intergenic
AATTCCATCTTTAAACTTCC+TGG 0.265939 2.2:+47353495 MS.gene22519:CDS
TACATTAATGTTTCAAAATC+AGG 0.276613 2.2:-47357391 None:intergenic
TCTTTGAAGAGAGTGATCTT+TGG 0.357018 2.2:-47352003 None:intergenic
CGTTTAAGGCCAGGTGAATC+AGG 0.374324 2.2:+47353522 MS.gene22519:CDS
ACCTTTGGATGTTTGACATT+AGG 0.375143 2.2:-47357427 None:intergenic
CTGATTCACCTGGCCTTAAA+CGG 0.404586 2.2:-47353521 None:intergenic
TGTGGGACCGCAGATATAAT+TGG 0.405646 2.2:-47357722 None:intergenic
TTGACATTAGGAGGTAAGAA+AGG 0.459956 2.2:-47357415 None:intergenic
GACTTTCTGGAAGCCGTACA+AGG 0.471577 2.2:-47357545 None:intergenic
ATTTAGGTGGGAGAGTGCCT+TGG 0.471712 2.2:+47357355 MS.gene22519:intron
TGATGAAAATTTGGCAGAAT+GGG 0.473389 2.2:+47353687 MS.gene22519:CDS
CAACACAAGTTCGCATTCCA+CGG 0.495413 2.2:-47352152 None:intergenic
CCTGGTGGCCGTTTAAGGCC+AGG 0.495817 2.2:+47353513 MS.gene22519:CDS
TTTGGATGTTTGACATTAGG+AGG 0.500321 2.2:-47357424 None:intergenic
CGATGGATTGAAGCGTAAGC+TGG 0.513167 2.2:+47353648 MS.gene22519:CDS
AAATTCTCTTTCAATATGAT+CGG 0.516874 2.2:+47357755 MS.gene22519:CDS
CTGATGAAAATTTGGCAGAA+TGG 0.518008 2.2:+47353686 MS.gene22519:CDS
TTGTGTTGAAGCTGTTATGA+TGG 0.520741 2.2:+47352167 MS.gene22519:CDS
AACACAAGTTCGCATTCCAC+GGG 0.523775 2.2:-47352151 None:intergenic
GGATGATGATGATGAGAAAG+TGG 0.527329 2.2:+47351923 MS.gene22519:CDS
TGAAGAGAGTGATCTTTGGA+AGG 0.539319 2.2:-47351999 None:intergenic
TGACATTAGGAGGTAAGAAA+GGG 0.539797 2.2:-47357414 None:intergenic
GAGAATTTCGAGAGTAGCTG+TGG 0.547415 2.2:-47357740 None:intergenic
TGGGAGAGTGCCTTGGAATG+TGG 0.549230 2.2:+47357362 MS.gene22519:CDS
GCCACCAGGAAGTTTAAAGA+TGG 0.552530 2.2:-47353499 None:intergenic
CCTGGCCTTAAACGGCCACC+AGG 0.554740 2.2:-47353513 None:intergenic
TATTGATTTCTAGATACCGA+TGG 0.559474 2.2:+47353631 MS.gene22519:intron
GGAGTAATGATGGGTGAAAA+CGG 0.560158 2.2:+47351894 None:intergenic
GATTGAAGCGTAAGCTGGCA+AGG 0.561989 2.2:+47353653 MS.gene22519:CDS
CAGGTCTCCACCACATTCCA+AGG 0.563880 2.2:-47357372 None:intergenic
CAGCTTACGCTTCAATCCAT+CGG 0.564207 2.2:-47353647 None:intergenic
TGATGGGTGAAAACGGAACA+AGG 0.565754 2.2:+47351901 MS.gene22519:CDS
TCCAGAAAGTCGAAGGTTCA+CGG 0.573505 2.2:+47357557 MS.gene22519:CDS
ATTTGAAACAGCAACAAATG+TGG 0.580078 2.2:-47353468 None:intergenic
TACGGCTTCCAGAAAGTCGA+AGG 0.582387 2.2:+47357550 MS.gene22519:CDS
TCCTAATGTCAAACATCCAA+AGG 0.584132 2.2:+47357426 MS.gene22519:CDS
TGAAAATTTGGCAGAATGGG+AGG 0.585137 2.2:+47353690 MS.gene22519:CDS
CCAAAATAGTAAGAATTCAG+AGG 0.595446 2.2:-47351960 None:intergenic
CCTAGCATACCTGATTCACC+TGG 0.612431 2.2:-47353531 None:intergenic
TCCATCTTTAAACTTCCTGG+TGG 0.626243 2.2:+47353498 MS.gene22519:CDS
GTTAATAGCTATGATGCCCG+TGG 0.626587 2.2:+47352135 MS.gene22519:intron
CCAAATTCGTGACAATCACA+AGG 0.646165 2.2:+47357617 MS.gene22519:CDS
GAGAGTGCCTTGGAATGTGG+TGG 0.658285 2.2:+47357365 MS.gene22519:CDS
TTGTCACGAATTTGGCACAA+CGG 0.671045 2.2:-47357609 None:intergenic
AGAATTTCGAGAGTAGCTGT+GGG 0.689430 2.2:-47357739 None:intergenic
ATACGGGCCAATTATATCTG+CGG 0.695873 2.2:+47357715 MS.gene22519:CDS
GATGGGTGAAAACGGAACAA+GGG 0.716935 2.2:+47351902 MS.gene22519:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTAATTTACTTAATTT+AGG + chr2.2:47357339-47357358 MS.gene22519:intron 10.0%
!! ACTAAAAAATATATCTAATA+TGG - chr2.2:47357116-47357135 None:intergenic 10.0%
!! ATTATAGACTAATATTAAAA+TGG + chr2.2:47354345-47354364 MS.gene22519:intron 10.0%
!! CTAAAAAATATATCTAATAT+GGG - chr2.2:47357115-47357134 None:intergenic 10.0%
!!! TTAATATTAGTCTATAATTA+AGG - chr2.2:47354343-47354362 None:intergenic 10.0%
!!! TTTTGGATATATATAATAAA+TGG - chr2.2:47355603-47355622 None:intergenic 10.0%
!! AACTTGTCTTAAAAAAAAAA+AGG - chr2.2:47352198-47352217 None:intergenic 15.0%
!! AATTGTTAAGAAAGAAAATT+AGG + chr2.2:47352836-47352855 MS.gene22519:intron 15.0%
!! ACTCCATTATATAATTATAT+TGG - chr2.2:47356468-47356487 None:intergenic 15.0%
!! ATAAATGGAGATAATAATTA+TGG - chr2.2:47355588-47355607 None:intergenic 15.0%
!! ATTATATAATTATATTGGAC+CGG - chr2.2:47356463-47356482 None:intergenic 15.0%
!! ATTGTTAAGAAAGAAAATTA+GGG + chr2.2:47352837-47352856 MS.gene22519:intron 15.0%
!! TCAAGGAAATAAAATAAATA+AGG - chr2.2:47355194-47355213 None:intergenic 15.0%
!! TGAAATAAAATGAAATGAAA+TGG - chr2.2:47355674-47355693 None:intergenic 15.0%
!! TTAAATTAATACACGAAAAT+AGG - chr2.2:47352061-47352080 None:intergenic 15.0%
!!! AATATAATTATATAATGGAG+TGG + chr2.2:47356467-47356486 MS.gene22519:intron 15.0%
!!! CTCTTTTTTCTTTTTTTTTT+TGG + chr2.2:47352223-47352242 MS.gene22519:intron 15.0%
!!! TAAATTGATTTTTGTTTTGA+AGG + chr2.2:47355067-47355086 MS.gene22519:intron 15.0%
!!! TTTTTTTGTTAGTATGATAT+CGG - chr2.2:47354884-47354903 None:intergenic 15.0%
!! AAAAACAAAAGATGTTCAAT+GGG - chr2.2:47353961-47353980 None:intergenic 20.0%
!! AAATTCTCTTTCAATATGAT+CGG + chr2.2:47357755-47357774 MS.gene22519:CDS 20.0%
!! AACATTACCAAATATTCAAA+GGG - chr2.2:47355401-47355420 None:intergenic 20.0%
!! AATTCAGGATTATTGTATTA+TGG - chr2.2:47352282-47352301 None:intergenic 20.0%
!! ACTAATAGTAAGATTGTATT+TGG + chr2.2:47355356-47355375 MS.gene22519:intron 20.0%
!! ATATTTAGTCATGATGATTA+AGG - chr2.2:47355699-47355718 None:intergenic 20.0%
!! ATGAATTCAAACTTTAATAC+TGG - chr2.2:47354234-47354253 None:intergenic 20.0%
!! ATTAAAATTCTTAAATGTCG+CGG - chr2.2:47352490-47352509 None:intergenic 20.0%
!! CTTTAAACTTAATTAACGTA+TGG + chr2.2:47353034-47353053 MS.gene22519:intron 20.0%
!! GAATTAACAAAATATGATGA+TGG - chr2.2:47354267-47354286 None:intergenic 20.0%
!! GATTCTAAGTTTAAAAAGAA+AGG - chr2.2:47353728-47353747 None:intergenic 20.0%
!! GGTCCAATATAATTATATAA+TGG + chr2.2:47356462-47356481 MS.gene22519:intron 20.0%
!! GTAATTTACTTAATTTAGGT+GGG + chr2.2:47357343-47357362 MS.gene22519:intron 20.0%
!! TAAAGTTTGAATTCATTTCA+CGG + chr2.2:47354238-47354257 MS.gene22519:intron 20.0%
!! TACATTAATGTTTCAAAATC+AGG - chr2.2:47357394-47357413 None:intergenic 20.0%
!! TCATGTATATGGAAAAAAAT+CGG + chr2.2:47354774-47354793 MS.gene22519:intron 20.0%
!! TGAATTATATGATATGATCA+AGG + chr2.2:47354961-47354980 MS.gene22519:intron 20.0%
!! TGTAATTTACTTAATTTAGG+TGG + chr2.2:47357342-47357361 MS.gene22519:intron 20.0%
!! TTATATAATTATATTGGACC+GGG - chr2.2:47356462-47356481 None:intergenic 20.0%
!! TTATCTTGTCTATTAGAATT+CGG + chr2.2:47353380-47353399 MS.gene22519:intron 20.0%
!!! AGTATATTCTTTTAATTCCT+TGG - chr2.2:47352377-47352396 None:intergenic 20.0%
!!! ATATGAATGAATGCATATTT+TGG - chr2.2:47355620-47355639 None:intergenic 20.0%
!!! ATTTTTACGAGTTTTTACTA+GGG + chr2.2:47353600-47353619 MS.gene22519:intron 20.0%
!!! GGAAGATTTTTTTTTTTTTG+AGG + chr2.2:47355122-47355141 MS.gene22519:intron 20.0%
!!! TAATTATGGTTTTGATCTTT+TGG - chr2.2:47355574-47355593 None:intergenic 20.0%
!!! TACTTGTGTTTTTTATGATT+TGG + chr2.2:47352393-47352412 MS.gene22519:intron 20.0%
!!! TATTTTTACGAGTTTTTACT+AGG + chr2.2:47353599-47353618 MS.gene22519:intron 20.0%
!!! TCTTTTTTTTTTTGGTAGAA+AGG + chr2.2:47352231-47352250 MS.gene22519:intron 20.0%
!!! TTCTTTTTAAACTTAGAATC+TGG + chr2.2:47353728-47353747 MS.gene22519:intron 20.0%
!!! TTTTGAGGAAAAAATAACTA+GGG + chr2.2:47355137-47355156 MS.gene22519:intron 20.0%
!!! TTTTTGAGGAAAAAATAACT+AGG + chr2.2:47355136-47355155 MS.gene22519:intron 20.0%
! AAATTTCTTCTTGAAGATTG+AGG + chr2.2:47353299-47353318 MS.gene22519:intron 25.0%
! AATAACAGAAAAAACGAACT+TGG - chr2.2:47352036-47352055 None:intergenic 25.0%
! AATATATGTCAGAAAACATG+TGG - chr2.2:47354829-47354848 None:intergenic 25.0%
! AATCATCATGACTAAATATG+AGG + chr2.2:47355700-47355719 MS.gene22519:intron 25.0%
! AATGTAACTGTTCTTGATTT+AGG + chr2.2:47353428-47353447 MS.gene22519:intron 25.0%
! AATTGATGAATGCAATTACT+AGG + chr2.2:47355101-47355120 MS.gene22519:intron 25.0%
! ACGATAATGAAAAAATCACA+AGG - chr2.2:47354388-47354407 None:intergenic 25.0%
! ACTAGTAATTACAATGAATG+AGG + chr2.2:47355036-47355055 MS.gene22519:intron 25.0%
! ATAAAAAACGCAATGACTTA+AGG - chr2.2:47352750-47352769 None:intergenic 25.0%
! CAAAAAGAACTATTAAACCT+TGG + chr2.2:47353179-47353198 MS.gene22519:intron 25.0%
! CAACATTACCAAATATTCAA+AGG - chr2.2:47355402-47355421 None:intergenic 25.0%
! CATATTCCTCATAAAGAAAA+AGG - chr2.2:47355530-47355549 None:intergenic 25.0%
! CTACATTTACATTACAATTC+AGG - chr2.2:47352297-47352316 None:intergenic 25.0%
! CTCATTTGTGTATATATCTA+TGG + chr2.2:47354914-47354933 MS.gene22519:intron 25.0%
! GAAAAACAAAAGATGTTCAA+TGG - chr2.2:47353962-47353981 None:intergenic 25.0%
! TTACTATACTCAATGATGTT+TGG + chr2.2:47353915-47353934 MS.gene22519:intron 25.0%
! TTATATTCTGATCAGATACT+TGG + chr2.2:47353845-47353864 MS.gene22519:intron 25.0%
! TTTCAAATGGTTAGAGAATT+GGG + chr2.2:47356874-47356893 MS.gene22519:intron 25.0%
!! AATGGGTGTAAGAAAATTTT+GGG - chr2.2:47353944-47353963 None:intergenic 25.0%
!! AGTAGAATTTTGAATCTTGT+AGG + chr2.2:47357160-47357179 MS.gene22519:intron 25.0%
!! ATGTAGAAAGAGTACAATAT+AGG - chr2.2:47357250-47357269 None:intergenic 25.0%
!! ATTTTGAATCTTGTAGGTTT+AGG + chr2.2:47357166-47357185 MS.gene22519:intron 25.0%
!! GTTTCTCGTTTCATAATTTT+TGG - chr2.2:47355011-47355030 None:intergenic 25.0%
!! TTTTTATGTTTCGGTAGTTT+GGG + chr2.2:47356520-47356539 MS.gene22519:intron 25.0%
!!! AGGTTTAGGTTATATAGTTT+TGG + chr2.2:47357180-47357199 MS.gene22519:intron 25.0%
!!! ATAGTTTTGGAATCAAAACT+GGG + chr2.2:47357193-47357212 MS.gene22519:intron 25.0%
!!! GAGAATAGTTTGATTTTTAG+AGG + chr2.2:47352961-47352980 MS.gene22519:intron 25.0%
!!! TATAGTTTTGGAATCAAAAC+TGG + chr2.2:47357192-47357211 MS.gene22519:intron 25.0%
!!! TCTGTGGTTTTTTTATGTTT+CGG + chr2.2:47356511-47356530 MS.gene22519:intron 25.0%
!!! TCTTTTAATTCCTTGGAAAT+GGG - chr2.2:47352370-47352389 None:intergenic 25.0%
!!! TTCTTTTAATTCCTTGGAAA+TGG - chr2.2:47352371-47352390 None:intergenic 25.0%
!!! TTGTTTTAGTGATTGTAAAG+TGG + chr2.2:47353814-47353833 MS.gene22519:intron 25.0%
!!! TTTTTTATGTTTCGGTAGTT+TGG + chr2.2:47356519-47356538 MS.gene22519:intron 25.0%
AAAAAATCGGTTGAAAGAGT+AGG + chr2.2:47354787-47354806 MS.gene22519:intron 30.0%
AAAAAGCTTGAGTCATCAAA+TGG + chr2.2:47353006-47353025 MS.gene22519:intron 30.0%
AAAGTGTAGAGTTTCTTTGA+TGG + chr2.2:47357029-47357048 MS.gene22519:intron 30.0%
AATTCCATCTTTAAACTTCC+TGG + chr2.2:47353495-47353514 MS.gene22519:CDS 30.0%
AGACAGAAGAATATCTTCTT+AGG + chr2.2:47352878-47352897 MS.gene22519:intron 30.0%
AGATGTAAGTTATGAAGGAT+CGG - chr2.2:47355946-47355965 None:intergenic 30.0%
AGCTCTACTATATAAGAGTT+GGG + chr2.2:47352327-47352346 MS.gene22519:intron 30.0%
ATGTGTTTGCCAATATAGAA+AGG + chr2.2:47352595-47352614 MS.gene22519:intron 30.0%
ATTTGCAAACATTTCGAACT+CGG - chr2.2:47353580-47353599 None:intergenic 30.0%
CATATGAGTATATCACAAAC+AGG + chr2.2:47355635-47355654 MS.gene22519:intron 30.0%
CCAAAATAGTAAGAATTCAG+AGG - chr2.2:47351963-47351982 None:intergenic 30.0%
CCACTTATTCATCTTGAAAA+AGG - chr2.2:47354564-47354583 None:intergenic 30.0%
CTACATTCTCATGTTAATCT+TGG - chr2.2:47352687-47352706 None:intergenic 30.0%
GCGTACATAGTATAATTCAT+AGG - chr2.2:47354495-47354514 None:intergenic 30.0%
GTTTCAAATGGTTAGAGAAT+TGG + chr2.2:47356873-47356892 MS.gene22519:intron 30.0%
TCTGCAAAATACACATGTTA+AGG - chr2.2:47357694-47357713 None:intergenic 30.0%
TGATGAAAATTTGGCAGAAT+GGG + chr2.2:47353687-47353706 MS.gene22519:CDS 30.0%
TTCCATTTCAAAACCATGTT+AGG - chr2.2:47356244-47356263 None:intergenic 30.0%
TTTGATTCTGCTCATGTATA+TGG + chr2.2:47354763-47354782 MS.gene22519:intron 30.0%
TTTGCAAAGACTAAGAATGA+CGG - chr2.2:47353163-47353182 None:intergenic 30.0%
! AAACTTCAAGCTAAGTTTTC+CGG - chr2.2:47353344-47353363 None:intergenic 30.0%
! AAAGGTCATAGAGAACTTTT+AGG - chr2.2:47355512-47355531 None:intergenic 30.0%
! AAGGTCATAGAGAACTTTTA+GGG - chr2.2:47355511-47355530 None:intergenic 30.0%
! ATGTGTATTTTGCAGACATA+CGG + chr2.2:47357698-47357717 MS.gene22519:intron 30.0%
! ATTTCCTTGACTTGAGATAT+TGG + chr2.2:47355204-47355223 MS.gene22519:intron 30.0%
! ATTTGAAACAGCAACAAATG+TGG - chr2.2:47353471-47353490 None:intergenic 30.0%
! CAATGGGTGTAAGAAAATTT+TGG - chr2.2:47353945-47353964 None:intergenic 30.0%
! CCTCTGAATTCTTACTATTT+TGG + chr2.2:47351960-47351979 MS.gene22519:CDS 30.0%
! CTATGACCTTTTTCTTTATG+AGG + chr2.2:47355521-47355540 MS.gene22519:intron 30.0%
! GTACAAAACTTTTCCTTGTA+CGG + chr2.2:47357532-47357551 MS.gene22519:CDS 30.0%
! TAGCTCTACTATATAAGAGT+TGG + chr2.2:47352326-47352345 MS.gene22519:intron 30.0%
! TTTGCAGTATGATTCTGAAA+TGG + chr2.2:47353404-47353423 MS.gene22519:intron 30.0%
!! AGTTTGATTTTTAGAGGTAG+AGG + chr2.2:47352967-47352986 MS.gene22519:intron 30.0%
!! CCAAAGGTACATTTTTCAAA+AGG + chr2.2:47357442-47357461 MS.gene22519:intron 30.0%
!! CCTTTTGAAAAATGTACCTT+TGG - chr2.2:47357445-47357464 None:intergenic 30.0%
!! CGATATGTTGATGATGTAAT+CGG - chr2.2:47354003-47354022 None:intergenic 30.0%
!! CTTTTAATTCCTTGGAAATG+GGG - chr2.2:47352369-47352388 None:intergenic 30.0%
!! GTTTGATTTTTAGAGGTAGA+GGG + chr2.2:47352968-47352987 MS.gene22519:intron 30.0%
!! TATTGATTTCTAGATACCGA+TGG + chr2.2:47353631-47353650 MS.gene22519:intron 30.0%
!! TGGATTTGATTTGTATCCAT+CGG + chr2.2:47353054-47353073 MS.gene22519:intron 30.0%
!! TTTTTAGTCAAGTATCCTAG+TGG + chr2.2:47354528-47354547 MS.gene22519:intron 30.0%
!!! AATTTTTGGTCAGATGAATC+AGG - chr2.2:47354997-47355016 None:intergenic 30.0%
!!! CCTTTTTCAAGATGAATAAG+TGG + chr2.2:47354561-47354580 MS.gene22519:intron 30.0%
!!! GATAGCAACTTCATGTTTTT+TGG - chr2.2:47357585-47357604 None:intergenic 30.0%
!!! TGGTTTTGTGTTTCTGAATA+AGG - chr2.2:47355973-47355992 None:intergenic 30.0%
AAAAAAACCACAGAAGCAAC+TGG - chr2.2:47356505-47356524 None:intergenic 35.0%
AAGTGTAACAATCGCAGTTT+AGG + chr2.2:47355295-47355314 MS.gene22519:intron 35.0%
AATACTAGTTGTATAGTCCC+TGG + chr2.2:47354109-47354128 MS.gene22519:intron 35.0%
ACAATTGAACGCGTTTCAAA+TGG + chr2.2:47356861-47356880 MS.gene22519:intron 35.0%
ACCTTTGGATGTTTGACATT+AGG - chr2.2:47357430-47357449 None:intergenic 35.0%
ACTCTTGAATCAGAGACATA+AGG - chr2.2:47357077-47357096 None:intergenic 35.0%
AGAGTTTCTTTGATGGAGAA+CGG + chr2.2:47357036-47357055 MS.gene22519:intron 35.0%
AGTTTCACGATCTATCTTCA+TGG + chr2.2:47357500-47357519 MS.gene22519:intron 35.0%
ATATTGGAGAGTTTGTGGTA+TGG + chr2.2:47356802-47356821 MS.gene22519:intron 35.0%
ATGTAATCGGAAAAGAACGA+TGG - chr2.2:47353990-47354009 None:intergenic 35.0%
CATATAATAATGCATGTCCC+TGG + chr2.2:47354613-47354632 MS.gene22519:intron 35.0%
CGTATTTACCACAATACCTT+TGG - chr2.2:47356323-47356342 None:intergenic 35.0%
CTGATGAAAATTTGGCAGAA+TGG + chr2.2:47353686-47353705 MS.gene22519:CDS 35.0%
GAAAACACTCATAGATGCAT+TGG + chr2.2:47352918-47352937 MS.gene22519:intron 35.0%
GAAAAGACAAGTAAACAGCT+AGG + chr2.2:47352415-47352434 MS.gene22519:intron 35.0%
GAGAGAGATGTAAGTTATGA+AGG - chr2.2:47355951-47355970 None:intergenic 35.0%
GCAGTTTCCCTTTGAATATT+TGG + chr2.2:47355391-47355410 MS.gene22519:intron 35.0%
GCTCTACTATATAAGAGTTG+GGG + chr2.2:47352328-47352347 MS.gene22519:intron 35.0%
GCTTTCTGCTGATGAAAATT+TGG + chr2.2:47353678-47353697 MS.gene22519:CDS 35.0%
GGACATGCATTATTATATGC+AGG - chr2.2:47354612-47354631 None:intergenic 35.0%
TAATTATATTGGACCGGGTT+TGG - chr2.2:47356457-47356476 None:intergenic 35.0%
TAGAAACCCTATTCCAAAAC+AGG + chr2.2:47356213-47356232 MS.gene22519:intron 35.0%
TAGACCAATATCTCAAGTCA+AGG - chr2.2:47355211-47355230 None:intergenic 35.0%
TAGTGGAAAAATCTCACCAA+GGG + chr2.2:47354178-47354197 MS.gene22519:intron 35.0%
TCAAAATACAGAAAAGCTGC+AGG - chr2.2:47353097-47353116 None:intergenic 35.0%
TCCTAATGTCAAACATCCAA+AGG + chr2.2:47357426-47357445 MS.gene22519:CDS 35.0%
TCTTCTTGAAGATTGAGGTT+TGG + chr2.2:47353304-47353323 MS.gene22519:intron 35.0%
TGACATTAGGAGGTAAGAAA+GGG - chr2.2:47357417-47357436 None:intergenic 35.0%
TGACCTCATAAAAACTGACT+CGG + chr2.2:47356012-47356031 MS.gene22519:intron 35.0%
TGCTAGAAGCCTTTCTATAT+TGG - chr2.2:47352607-47352626 None:intergenic 35.0%
TGGTTAGCAAATTCAACAGT+TGG - chr2.2:47355764-47355783 None:intergenic 35.0%
TTGAAAAACCGTCACAACTA+CGG - chr2.2:47354152-47354171 None:intergenic 35.0%
TTGACATTAGGAGGTAAGAA+AGG - chr2.2:47357418-47357437 None:intergenic 35.0%
TTGCTTAATTGAAGAGAGCT+TGG - chr2.2:47353218-47353237 None:intergenic 35.0%
TTGTGTTGAAGCTGTTATGA+TGG + chr2.2:47352167-47352186 MS.gene22519:CDS 35.0%
TTTGGATGTTTGACATTAGG+AGG - chr2.2:47357427-47357446 None:intergenic 35.0%
TTTGGTAAAGCATGTTTGAC+CGG + chr2.2:47353322-47353341 MS.gene22519:intron 35.0%
! AAAACAGGTTTTGCCTAACA+TGG + chr2.2:47356228-47356247 MS.gene22519:intron 35.0%
! AGATTTTTATGGGCTTTACG+TGG + chr2.2:47356601-47356620 MS.gene22519:intron 35.0%
! AGGTTGAGCAAATTGCTATT+GGG + chr2.2:47356560-47356579 MS.gene22519:intron 35.0%
! AGTCAGTTTTTATGAGGTCA+AGG - chr2.2:47356012-47356031 None:intergenic 35.0%
! ATAGAGTGATTGAAGAGCAT+AGG - chr2.2:47356362-47356381 None:intergenic 35.0%
! ATAGTGGAAAAATCTCACCA+AGG + chr2.2:47354177-47354196 MS.gene22519:intron 35.0%
! ATGTTAGGCAAAACCTGTTT+TGG - chr2.2:47356229-47356248 None:intergenic 35.0%
! CGTAACTTGTGTAATCTCTT+GGG - chr2.2:47356651-47356670 None:intergenic 35.0%
! GATTCAACCGATTCAAGTTT+CGG - chr2.2:47356166-47356185 None:intergenic 35.0%
! TAACCGAGTCAGTTTTTATG+AGG - chr2.2:47356018-47356037 None:intergenic 35.0%
! TAGAGTGATTGAAGAGCATA+GGG - chr2.2:47356361-47356380 None:intergenic 35.0%
! TCGTAACTTGTGTAATCTCT+TGG - chr2.2:47356652-47356671 None:intergenic 35.0%
! TCTTTGAAGAGAGTGATCTT+TGG - chr2.2:47352006-47352025 None:intergenic 35.0%
! TGCTATTATTGATTGCGTAC+TGG + chr2.2:47353883-47353902 MS.gene22519:intron 35.0%
! TGTGTATTTTGCAGACATAC+GGG + chr2.2:47357699-47357718 MS.gene22519:intron 35.0%
! TGTTAACGAGCGGTAATTTT+GGG - chr2.2:47355838-47355857 None:intergenic 35.0%
! TTAGGGTGGAACTTTTAGAT+AGG - chr2.2:47355494-47355513 None:intergenic 35.0%
! TTGGTAACAAAAAAGAGCCA+AGG - chr2.2:47353199-47353218 None:intergenic 35.0%
!! AAAGGCGCTACTTTGAAAAA+TGG + chr2.2:47352445-47352464 MS.gene22519:intron 35.0%
!! AAGGAGTGTGTTTTTGATGT+TGG - chr2.2:47355993-47356012 None:intergenic 35.0%
!! ATTAGGTTGGATTATAGGGT+TGG + chr2.2:47356910-47356929 MS.gene22519:intron 35.0%
!! CAAAGAAACCAAAGGTATTG+TGG + chr2.2:47356312-47356331 MS.gene22519:intron 35.0%
!! GGAATAGGGTTTCTAAAACT+CGG - chr2.2:47356208-47356227 None:intergenic 35.0%
!! GGAGATTAGGTTGGATTATA+GGG + chr2.2:47356906-47356925 MS.gene22519:intron 35.0%
!! GGATTTGATTTGTATCCATC+GGG + chr2.2:47353055-47353074 MS.gene22519:intron 35.0%
!! TATGAAGGATCGGTATTGAT+CGG - chr2.2:47355936-47355955 None:intergenic 35.0%
!! TGGAGATTAGGTTGGATTAT+AGG + chr2.2:47356905-47356924 MS.gene22519:intron 35.0%
!! TTCGTTTTTAGATGTGCTTG+CGG + chr2.2:47352771-47352790 MS.gene22519:intron 35.0%
!!! CGGTTTTTCAAGTATCATAG+TGG + chr2.2:47354161-47354180 MS.gene22519:intron 35.0%
!!! GCAAAACCTGTTTTGGAATA+GGG - chr2.2:47356222-47356241 None:intergenic 35.0%
!!! TGCCTAACATGGTTTTGAAA+TGG + chr2.2:47356239-47356258 MS.gene22519:intron 35.0%
!!! TGTCATTGTTTTTGACCAAG+AGG - chr2.2:47355337-47355356 None:intergenic 35.0%
AAACAGCTAGGCGAACTAAA+AGG + chr2.2:47352427-47352446 MS.gene22519:intron 40.0%
AAAGGTGAATTCTAGCCACT+AGG - chr2.2:47354546-47354565 None:intergenic 40.0%
AATTGTTGCTCTGCATACAC+CGG - chr2.2:47356847-47356866 None:intergenic 40.0%
ACGATCTATCTTCATGGTGT+AGG + chr2.2:47357506-47357525 MS.gene22519:intron 40.0%
ACTCGATATTGGAGAGTTTG+TGG + chr2.2:47356797-47356816 MS.gene22519:intron 40.0%
AGAATTTCGAGAGTAGCTGT+GGG - chr2.2:47357742-47357761 None:intergenic 40.0%
AGAGTAGGACATAACTGATG+TGG + chr2.2:47354802-47354821 MS.gene22519:intron 40.0%
AGCCCATAAAAATCTAACCC+CGG - chr2.2:47356596-47356615 None:intergenic 40.0%
AGTTGGAACCATGTTTCCAA+TGG - chr2.2:47355747-47355766 None:intergenic 40.0%
ATACGGGCCAATTATATCTG+CGG + chr2.2:47357715-47357734 MS.gene22519:CDS 40.0%
ATTAGTTGCGGATGAAGAAC+GGG - chr2.2:47355873-47355892 None:intergenic 40.0%
CAAGTTGTACTCTCTCAAAG+TGG + chr2.2:47352255-47352274 MS.gene22519:intron 40.0%
CCAAATTCGTGACAATCACA+AGG + chr2.2:47357617-47357636 MS.gene22519:CDS 40.0%
CCACATTCCGAAACTTGAAT+CGG + chr2.2:47356156-47356175 MS.gene22519:intron 40.0%
CCTTGTGATTGTCACGAATT+TGG - chr2.2:47357620-47357639 None:intergenic 40.0%
CTCATTAGCTACATCGATGA+TGG - chr2.2:47356077-47356096 None:intergenic 40.0%
GAATCAGGTATGCTAGGATT+AGG + chr2.2:47353537-47353556 MS.gene22519:intron 40.0%
GAGTTTCTTTGATGGAGAAC+GGG + chr2.2:47357037-47357056 MS.gene22519:intron 40.0%
GCATTATTATATGCAGGTGC+CGG - chr2.2:47354606-47354625 None:intergenic 40.0%
GGTCCAACAAGATCAATAAC+CGG - chr2.2:47356421-47356440 None:intergenic 40.0%
GGTGTCAGTACATTGATGAA+CGG + chr2.2:47356967-47356986 MS.gene22519:intron 40.0%
GGTTAGAGAATTGGGATTAG+CGG + chr2.2:47356882-47356901 MS.gene22519:intron 40.0%
GGTTATTGATCTTGTTGGAC+CGG + chr2.2:47356420-47356439 MS.gene22519:intron 40.0%
TACACCAACCATTGGAAACA+TGG + chr2.2:47355736-47355755 MS.gene22519:intron 40.0%
TACGAGAATGTTCTACCGAA+CGG + chr2.2:47356667-47356686 MS.gene22519:intron 40.0%
TCCATCTTTAAACTTCCTGG+TGG + chr2.2:47353498-47353517 MS.gene22519:CDS 40.0%
TGAAAATTTGGCAGAATGGG+AGG + chr2.2:47353690-47353709 MS.gene22519:CDS 40.0%
TGAAGAGAGTGATCTTTGGA+AGG - chr2.2:47352002-47352021 None:intergenic 40.0%
TGAAGGTAAGTGTTAACGAG+CGG - chr2.2:47355848-47355867 None:intergenic 40.0%
TTAGGTGATTTAGTCATGCG+TGG + chr2.2:47352896-47352915 MS.gene22519:intron 40.0%
TTCATCTCTACACCAACCAT+TGG + chr2.2:47355728-47355747 MS.gene22519:intron 40.0%
TTCGTGGATTTCGTATCATG+CGG + chr2.2:47356282-47356301 MS.gene22519:intron 40.0%
TTGTCACGAATTTGGCACAA+CGG - chr2.2:47357612-47357631 None:intergenic 40.0%
TTGTGGTTGGAACTCGATAT+TGG + chr2.2:47356786-47356805 MS.gene22519:intron 40.0%
! AGATGAATAAGTGGAGTGTC+CGG + chr2.2:47354570-47354589 MS.gene22519:intron 40.0%
! ATTAGCTACATCGATGATGG+TGG - chr2.2:47356074-47356093 None:intergenic 40.0%
! CACTCATAGATGCATTGGTA+AGG + chr2.2:47352923-47352942 MS.gene22519:intron 40.0%
! CAGGTTGAGCAAATTGCTAT+TGG + chr2.2:47356559-47356578 MS.gene22519:intron 40.0%
! CATAGATGCATTGGTAAGGA+TGG + chr2.2:47352927-47352946 MS.gene22519:intron 40.0%
! GATGAAACGGAGATTAGTTG+CGG - chr2.2:47355885-47355904 None:intergenic 40.0%
! GATTAGTTGCGGATGAAGAA+CGG - chr2.2:47355874-47355893 None:intergenic 40.0%
! GGAAGGTACAAAGAAACCAA+AGG + chr2.2:47356304-47356323 MS.gene22519:intron 40.0%
! GGATGATGATGATGAGAAAG+TGG + chr2.2:47351923-47351942 MS.gene22519:CDS 40.0%
! GTGTTAACGAGCGGTAATTT+TGG - chr2.2:47355839-47355858 None:intergenic 40.0%
! TGCCGGGGTTAGATTTTTAT+GGG + chr2.2:47356591-47356610 MS.gene22519:intron 40.0%
! TGGGATTGTGATAACGAGAA+TGG - chr2.2:47355819-47355838 None:intergenic 40.0%
!! AAAACAGGTGTCACTCACAT+TGG + chr2.2:47354203-47354222 MS.gene22519:intron 40.0%
!! AAACAGGTGTCACTCACATT+GGG + chr2.2:47354204-47354223 MS.gene22519:intron 40.0%
!! ATGAAGGATCGGTATTGATC+GGG - chr2.2:47355935-47355954 None:intergenic 40.0%
!! GTCATAGAGAACTTTTAGGG+TGG - chr2.2:47355508-47355527 None:intergenic 40.0%
!! TACCGAACGGGTTTTTGAAA+CGG + chr2.2:47356680-47356699 MS.gene22519:intron 40.0%
!! TTATAGGGTTGGTGGAGATT+TGG + chr2.2:47356921-47356940 MS.gene22519:intron 40.0%
!! TTCCACCGGTTTACACAATT+GGG + chr2.2:47356395-47356414 MS.gene22519:intron 40.0%
!!! GGCAAAACCTGTTTTGGAAT+AGG - chr2.2:47356223-47356242 None:intergenic 40.0%
AAATGTCGCGGCTGTAATCA+TGG - chr2.2:47352478-47352497 None:intergenic 45.0%
AACACAAGTTCGCATTCCAC+GGG - chr2.2:47352154-47352173 None:intergenic 45.0%
ACACAGGACAAGCTTAGATC+AGG + chr2.2:47352808-47352827 MS.gene22519:intron 45.0%
ACGAGAATGTTCTACCGAAC+GGG + chr2.2:47356668-47356687 MS.gene22519:intron 45.0%
ACTTGCAAACTTGCGAGAGA+AGG - chr2.2:47354067-47354086 None:intergenic 45.0%
AGAATGGTTGCAGAGAGTTG+AGG - chr2.2:47355803-47355822 None:intergenic 45.0%
AGACTAAGAATGACGGCAAG+TGG - chr2.2:47353156-47353175 None:intergenic 45.0%
AGGTTGGATTATAGGGTTGG+TGG + chr2.2:47356913-47356932 MS.gene22519:intron 45.0%
ATCGCAGTTTAGGAGAAGAG+AGG + chr2.2:47355305-47355324 MS.gene22519:intron 45.0%
ATCTCACCAAGGGCAAAAAC+AGG + chr2.2:47354188-47354207 MS.gene22519:intron 45.0%
ATTAGCGGTGGAGATTAGGT+TGG + chr2.2:47356897-47356916 MS.gene22519:intron 45.0%
CAACACAAGTTCGCATTCCA+CGG - chr2.2:47352155-47352174 None:intergenic 45.0%
CACCTTGTGAGAGAGAGAAA+TGG - chr2.2:47354044-47354063 None:intergenic 45.0%
CAGCTTACGCTTCAATCCAT+CGG - chr2.2:47353650-47353669 None:intergenic 45.0%
CAGGCGGAAGAAGTTGAAAA+TGG + chr2.2:47356946-47356965 MS.gene22519:intron 45.0%
CAGTGATGAGATTACGAGGA+AGG + chr2.2:47356990-47357009 MS.gene22519:intron 45.0%
CCACGAATAAGCGTCTTCTT+CGG - chr2.2:47356269-47356288 None:intergenic 45.0%
CTACAGTAGTAGCTGTGATG+TGG - chr2.2:47352518-47352537 None:intergenic 45.0%
CTCCATTTCTCTCTCTCACA+AGG + chr2.2:47354039-47354058 MS.gene22519:intron 45.0%
GAAGAGAGGAAACTTCCTCT+TGG + chr2.2:47355319-47355338 MS.gene22519:intron 45.0%
GAATGGTTGCAGAGAGTTGA+GGG - chr2.2:47355802-47355821 None:intergenic 45.0%
GAGAATTTCGAGAGTAGCTG+TGG - chr2.2:47357743-47357762 None:intergenic 45.0%
GATGGGTGAAAACGGAACAA+GGG + chr2.2:47351902-47351921 MS.gene22519:CDS 45.0%
GATTCGTGTCACATTGTGGT+TGG + chr2.2:47356773-47356792 MS.gene22519:intron 45.0%
GCCACCAGGAAGTTTAAAGA+TGG - chr2.2:47353502-47353521 None:intergenic 45.0%
GGAACCATGTTTCCAATGGT+TGG - chr2.2:47355743-47355762 None:intergenic 45.0%
GGGAAGTCTTGAAGTCAAAC+AGG + chr2.2:47356540-47356559 MS.gene22519:intron 45.0%
GGTAAGGATGGCTTACTAGA+TGG + chr2.2:47352939-47352958 MS.gene22519:intron 45.0%
GTCCGTTTCAAAAACCCGTT+CGG - chr2.2:47356685-47356704 None:intergenic 45.0%
GTTAATAGCTATGATGCCCG+TGG + chr2.2:47352135-47352154 MS.gene22519:intron 45.0%
TAGATGTGCTTGCGGATGAA+TGG + chr2.2:47352779-47352798 MS.gene22519:intron 45.0%
TCCAGAAAGTCGAAGGTTCA+CGG + chr2.2:47357557-47357576 MS.gene22519:CDS 45.0%
TCGGAAAAGAACGATGGAGA+AGG - chr2.2:47353984-47354003 None:intergenic 45.0%
TCGTGGATTTCGTATCATGC+GGG + chr2.2:47356283-47356302 MS.gene22519:intron 45.0%
TGAGAGAGAGAAATGGAGAG+TGG - chr2.2:47354037-47354056 None:intergenic 45.0%
TGAGCATAACTCAGTTGCCA+GGG - chr2.2:47354633-47354652 None:intergenic 45.0%
TGGCAACTGAGTTATGCTCA+CGG + chr2.2:47354633-47354652 MS.gene22519:intron 45.0%
TGTGGGACCGCAGATATAAT+TGG - chr2.2:47357725-47357744 None:intergenic 45.0%
TTCCTTGGAAATGGGGAATC+CGG - chr2.2:47352362-47352381 None:intergenic 45.0%
! ATGAATAAGTGGAGTGTCCG+GGG + chr2.2:47354572-47354591 MS.gene22519:intron 45.0%
! CCGATTCAAGTTTCGGAATG+TGG - chr2.2:47356159-47356178 None:intergenic 45.0%
! GATGAATAAGTGGAGTGTCC+GGG + chr2.2:47354571-47354590 MS.gene22519:intron 45.0%
! GATGGGTATAGTTTGTGGGT+GGG + chr2.2:47356711-47356730 MS.gene22519:intron 45.0%
! GGGTGGAACTTTTAGATAGG+TGG - chr2.2:47355491-47355510 None:intergenic 45.0%
! GTGCCGGGGTTAGATTTTTA+TGG + chr2.2:47356590-47356609 MS.gene22519:intron 45.0%
! TAGAGAATTGGGATTAGCGG+TGG + chr2.2:47356885-47356904 MS.gene22519:intron 45.0%
! TGATGATTTGCAGCTTCCAC+CGG + chr2.2:47356381-47356400 MS.gene22519:intron 45.0%
! TGATGGGTGAAAACGGAACA+AGG + chr2.2:47351901-47351920 MS.gene22519:CDS 45.0%
! TGCAAGTCTGTTGAGTGTTG+AGG + chr2.2:47354080-47354099 MS.gene22519:intron 45.0%
! TTTAGGTGCCGTAGTTGTGA+CGG + chr2.2:47354141-47354160 MS.gene22519:intron 45.0%
!! CTGATTCACCTGGCCTTAAA+CGG - chr2.2:47353524-47353543 None:intergenic 45.0%
!! CTTCCACCGGTTTACACAAT+TGG + chr2.2:47356394-47356413 MS.gene22519:intron 45.0%
AACTTCCTGGTGGCCGTTTA+AGG + chr2.2:47353508-47353527 MS.gene22519:CDS 50.0%
AAGAGTTGGGGTTCGAACTC+CGG + chr2.2:47352340-47352359 MS.gene22519:intron 50.0%
AATCTCTTGGGTCTGCTGAC+TGG - chr2.2:47356639-47356658 None:intergenic 50.0%
ACCGGCCCAATTGTGTAAAC+CGG - chr2.2:47356403-47356422 None:intergenic 50.0%
ACCGTGAACCTTCGACTTTC+TGG - chr2.2:47357561-47357580 None:intergenic 50.0%
ACGCGAAGAAGAGGTAGCAA+GGG - chr2.2:47356108-47356127 None:intergenic 50.0%
ACGGCAGTGATGAGATTACG+AGG + chr2.2:47356986-47357005 MS.gene22519:intron 50.0%
AGAGAGTTGAGGGTGGTGTT+TGG - chr2.2:47355792-47355811 None:intergenic 50.0%
ATCTTGTTGGACCGGCTGAA+TGG + chr2.2:47356428-47356447 MS.gene22519:intron 50.0%
CCAGGTGAATCAGGTATGCT+AGG + chr2.2:47353531-47353550 MS.gene22519:intron 50.0%
CCGAAGAAGACGCTTATTCG+TGG + chr2.2:47356266-47356285 MS.gene22519:intron 50.0%
CCTAGCATACCTGATTCACC+TGG - chr2.2:47353534-47353553 None:intergenic 50.0%
CGGATGAAGAACGGGATTGA+AGG - chr2.2:47355865-47355884 None:intergenic 50.0%
CGTGAATCCAAGGAAACTCG+CGG - chr2.2:47356134-47356153 None:intergenic 50.0%
GAAGAAGAGGTAGCAAGGGA+CGG - chr2.2:47356104-47356123 None:intergenic 50.0%
GAATCCACCCACTGCCTTAT+GGG - chr2.2:47356758-47356777 None:intergenic 50.0%
GAATGTGGAGCGTGAATCCA+AGG - chr2.2:47356144-47356163 None:intergenic 50.0%
GAGGGTGGTGTTTGGTTAGA+TGG - chr2.2:47355784-47355803 None:intergenic 50.0%
GATTGAAGCGTAAGCTGGCA+AGG + chr2.2:47353653-47353672 MS.gene22519:CDS 50.0%
GCAACTGAGTTATGCTCACG+GGG + chr2.2:47354635-47354654 MS.gene22519:intron 50.0%
GGATTTCGTATCATGCGGGA+AGG + chr2.2:47356287-47356306 MS.gene22519:intron 50.0%
GGCAACTGAGTTATGCTCAC+GGG + chr2.2:47354634-47354653 MS.gene22519:intron 50.0%
GGGCCGGTTATTGATCTTGT+TGG + chr2.2:47356415-47356434 MS.gene22519:intron 50.0%
GTGAATCCAAGGAAACTCGC+GGG - chr2.2:47356133-47356152 None:intergenic 50.0%
GTGAGCATAACTCAGTTGCC+AGG - chr2.2:47354634-47354653 None:intergenic 50.0%
TACGGCTTCCAGAAAGTCGA+AGG + chr2.2:47357550-47357569 MS.gene22519:CDS 50.0%
TCTTGTTGGACCGGCTGAAT+GGG + chr2.2:47356429-47356448 MS.gene22519:intron 50.0%
TGTATCCATCGGGACTCACA+GGG + chr2.2:47353065-47353084 MS.gene22519:intron 50.0%
TGTGCTTGCGGATGAATGGT+TGG + chr2.2:47352783-47352802 MS.gene22519:intron 50.0%
TTGTATCCATCGGGACTCAC+AGG + chr2.2:47353064-47353083 MS.gene22519:intron 50.0%
TTTGCAGCCAGTTGCTTCTG+TGG + chr2.2:47356495-47356514 MS.gene22519:intron 50.0%
! ACCGGTTTACACAATTGGGC+CGG + chr2.2:47356399-47356418 MS.gene22519:intron 50.0%
! ATCTCTTGGGTCTGCTGACT+GGG - chr2.2:47356638-47356657 None:intergenic 50.0%
! CGGGGATGGGTATAGTTTGT+GGG + chr2.2:47356707-47356726 MS.gene22519:intron 50.0%
! CGTTTAAGGCCAGGTGAATC+AGG + chr2.2:47353522-47353541 MS.gene22519:CDS 50.0%
! GACTTTCTGGAAGCCGTACA+AGG - chr2.2:47357548-47357567 None:intergenic 50.0%
! GGATGAATGGTTGGTCACAC+AGG + chr2.2:47352792-47352811 MS.gene22519:intron 50.0%
! GGATGGGTATAGTTTGTGGG+TGG + chr2.2:47356710-47356729 MS.gene22519:intron 50.0%
! GGTGGATTCGTGTCACATTG+TGG + chr2.2:47356769-47356788 MS.gene22519:intron 50.0%
! TGGGATTAGCGGTGGAGATT+AGG + chr2.2:47356893-47356912 MS.gene22519:intron 50.0%
!! AGCTACATCGATGATGGTGG+TGG - chr2.2:47356071-47356090 None:intergenic 50.0%
!! ATTTAGGTGGGAGAGTGCCT+TGG + chr2.2:47357355-47357374 MS.gene22519:intron 50.0%
!! CGATGGATTGAAGCGTAAGC+TGG + chr2.2:47353648-47353667 MS.gene22519:CDS 50.0%
!!! CGGGTTTTTGAAACGGACTG+CGG + chr2.2:47356687-47356706 MS.gene22519:intron 50.0%
!!! GGGTTTTTGAAACGGACTGC+GGG + chr2.2:47356688-47356707 MS.gene22519:intron 50.0%
!!! GGTTTTTGAAACGGACTGCG+GGG + chr2.2:47356689-47356708 MS.gene22519:intron 50.0%
!!! GTGACACCTGTTTTTGCCCT+TGG - chr2.2:47354197-47354216 None:intergenic 50.0%
ATCGGGTGCAGGAGGATCTA+CGG - chr2.2:47355918-47355937 None:intergenic 55.0%
CACCTAAACCTCTGCGACCA+GGG - chr2.2:47354129-47354148 None:intergenic 55.0%
CAGGTCTCCACCACATTCCA+AGG - chr2.2:47357375-47357394 None:intergenic 55.0%
CGAATCCACCCACTGCCTTA+TGG - chr2.2:47356759-47356778 None:intergenic 55.0%
CGGTTGGGAGGTGGATGAAA+CGG - chr2.2:47355898-47355917 None:intergenic 55.0%
CTATTGGGCTTGAACGTGCC+GGG + chr2.2:47356575-47356594 MS.gene22519:intron 55.0%
CTCCGGATTCCCCATTTCCA+AGG + chr2.2:47352357-47352376 MS.gene22519:intron 55.0%
GACGCGAAGAAGAGGTAGCA+AGG - chr2.2:47356109-47356128 None:intergenic 55.0%
GCGGGGATGGGTATAGTTTG+TGG + chr2.2:47356706-47356725 MS.gene22519:intron 55.0%
GCTATTGGGCTTGAACGTGC+CGG + chr2.2:47356574-47356593 MS.gene22519:intron 55.0%
GGCCCAATTGTGTAAACCGG+TGG - chr2.2:47356400-47356419 None:intergenic 55.0%
GGCTGAATGGGATCCAAACC+CGG + chr2.2:47356441-47356460 MS.gene22519:intron 55.0%
GGGTTTGGATCCCATTCAGC+CGG - chr2.2:47356442-47356461 None:intergenic 55.0%
GGTTCCACAAGCCAAGGTAC+TGG + chr2.2:47356732-47356751 MS.gene22519:intron 55.0%
GTGCAGGAGGATCTACGGTT+GGG - chr2.2:47355913-47355932 None:intergenic 55.0%
TATTGGGCTTGAACGTGCCG+GGG + chr2.2:47356576-47356595 MS.gene22519:intron 55.0%
TGCCTTATGGGCCAGTACCT+TGG - chr2.2:47356746-47356765 None:intergenic 55.0%
TGGTTGCAGAGAGTTGAGGG+TGG - chr2.2:47355799-47355818 None:intergenic 55.0%
TGTATAGTCCCTGGTCGCAG+AGG + chr2.2:47354118-47354137 MS.gene22519:intron 55.0%
TTAAGCCCTGTGAGTCCCGA+TGG - chr2.2:47353073-47353092 None:intergenic 55.0%
! GTACTGGCCCATAAGGCAGT+GGG + chr2.2:47356748-47356767 MS.gene22519:intron 55.0%
!! AGCCAAGGTACTGGCCCATA+AGG + chr2.2:47356741-47356760 MS.gene22519:intron 55.0%
!! GAGAGTGCCTTGGAATGTGG+TGG + chr2.2:47357365-47357384 MS.gene22519:CDS 55.0%
!! GATCGGTATTGATCGGGTGC+AGG - chr2.2:47355929-47355948 None:intergenic 55.0%
!! GGTTGGTGGAGATTTGGTGC+AGG + chr2.2:47356927-47356946 MS.gene22519:intron 55.0%
!! TGGGAGAGTGCCTTGGAATG+TGG + chr2.2:47357362-47357381 MS.gene22519:CDS 55.0%
!! TGGTGGAGATTTGGTGCAGG+CGG + chr2.2:47356930-47356949 MS.gene22519:intron 55.0%
!! TTGAAACGGACTGCGGGGAT+GGG + chr2.2:47356694-47356713 MS.gene22519:intron 55.0%
!! TTTGAAACGGACTGCGGGGA+TGG + chr2.2:47356693-47356712 MS.gene22519:intron 55.0%
AGTGTCCGGGGTTCGAACTC+CGG + chr2.2:47354584-47354603 MS.gene22519:intron 60.0%
CAGGAGGATCTACGGTTGGG+AGG - chr2.2:47355910-47355929 None:intergenic 60.0%
GAGGATCTACGGTTGGGAGG+TGG - chr2.2:47355907-47355926 None:intergenic 60.0%
GCACCTAAACCTCTGCGACC+AGG - chr2.2:47354130-47354149 None:intergenic 60.0%
GGCTTTACGTGGACCTCCGA+AGG + chr2.2:47356612-47356631 MS.gene22519:intron 60.0%
GGTGCAGGAGGATCTACGGT+TGG - chr2.2:47355914-47355933 None:intergenic 60.0%
GTCCCTGGTCGCAGAGGTTT+AGG + chr2.2:47354124-47354143 MS.gene22519:intron 60.0%
TACACCGGCCACGTGGCAAT+CGG - chr2.2:47356832-47356851 None:intergenic 60.0%
! TGGGCCAGTACCTTGGCTTG+TGG - chr2.2:47356739-47356758 None:intergenic 60.0%
! TGGGTGGGTTCCACAAGCCA+AGG + chr2.2:47356726-47356745 MS.gene22519:intron 60.0%
!! ATGGTGTGCCGATTGCCACG+TGG + chr2.2:47356821-47356840 MS.gene22519:intron 60.0%
!! CGGTATTGATCGGGTGCAGG+AGG - chr2.2:47355926-47355945 None:intergenic 60.0%
!! GGTACTGGCCCATAAGGCAG+TGG + chr2.2:47356747-47356766 MS.gene22519:intron 60.0%
CTCTGCATACACCGGCCACG+TGG - chr2.2:47356839-47356858 None:intergenic 65.0%
CTGGCCCATAAGGCAGTGGG+TGG + chr2.2:47356751-47356770 MS.gene22519:intron 65.0%
! CCTGGTGGCCGTTTAAGGCC+AGG + chr2.2:47353513-47353532 MS.gene22519:CDS 65.0%
! GGGTCTGCTGACTGGGCCTT+CGG - chr2.2:47356631-47356650 None:intergenic 65.0%
! TCTGCTGACTGGGCCTTCGG+AGG - chr2.2:47356628-47356647 None:intergenic 65.0%
!! AGGTGCCGGAGTTCGAACCC+CGG - chr2.2:47354592-47354611 None:intergenic 65.0%
!! CCTGGCCTTAAACGGCCACC+AGG - chr2.2:47353516-47353535 None:intergenic 65.0%
!! TGTGCCGATTGCCACGTGGC+CGG + chr2.2:47356825-47356844 MS.gene22519:intron 65.0%
GCGTCGCCCGCGAGTTTCCT+TGG + chr2.2:47356124-47356143 MS.gene22519:intron 70.0%
TCGCGGGCGACGCGAAGAAG+AGG - chr2.2:47356117-47356136 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 47351900 47357784 47351900 ID=MS.gene22519
chr2.2 mRNA 47351900 47357784 47351900 ID=MS.gene22519.t1;Parent=MS.gene22519
chr2.2 exon 47351900 47352036 47351900 ID=MS.gene22519.t1.exon1;Parent=MS.gene22519.t1
chr2.2 CDS 47351900 47352036 47351900 ID=cds.MS.gene22519.t1;Parent=MS.gene22519.t1
chr2.2 exon 47352143 47352188 47352143 ID=MS.gene22519.t1.exon2;Parent=MS.gene22519.t1
chr2.2 CDS 47352143 47352188 47352143 ID=cds.MS.gene22519.t1;Parent=MS.gene22519.t1
chr2.2 exon 47353450 47353543 47353450 ID=MS.gene22519.t1.exon3;Parent=MS.gene22519.t1
chr2.2 CDS 47353450 47353543 47353450 ID=cds.MS.gene22519.t1;Parent=MS.gene22519.t1
chr2.2 exon 47353644 47353711 47353644 ID=MS.gene22519.t1.exon4;Parent=MS.gene22519.t1
chr2.2 CDS 47353644 47353711 47353644 ID=cds.MS.gene22519.t1;Parent=MS.gene22519.t1
chr2.2 exon 47357361 47357447 47357361 ID=MS.gene22519.t1.exon5;Parent=MS.gene22519.t1
chr2.2 CDS 47357361 47357447 47357361 ID=cds.MS.gene22519.t1;Parent=MS.gene22519.t1
chr2.2 exon 47357528 47357638 47357528 ID=MS.gene22519.t1.exon6;Parent=MS.gene22519.t1
chr2.2 CDS 47357528 47357638 47357528 ID=cds.MS.gene22519.t1;Parent=MS.gene22519.t1
chr2.2 exon 47357713 47357784 47357713 ID=MS.gene22519.t1.exon7;Parent=MS.gene22519.t1
chr2.2 CDS 47357713 47357784 47357713 ID=cds.MS.gene22519.t1;Parent=MS.gene22519.t1
Gene Sequence

>MS.gene22519

ATGATGGGTGAAAACGGAACAAGGGATGATGATGATGAGAAAGTGGAAGTGAATATATATCCTCTGAATTCTTACTATTTTGGATCAAAAGATGCTATTCCTTCCAAAGATCACTCTCTTCAAAGATTCAAATCCAAGTTCGTTTTTTCTGTTATTTTCCTATTTTCGTGTATTAATTTAATTCTCTTTATTTTAAAAATGAATGAACTCATTTTATTTTTATTGTTGCATGTTTGTTAATAGCTATGATGCCCGTGGAATGCGAACTTGTGTTGAAGCTGTTATGATGGTTAGTCCTTTTTTTTTTTAAGACAAGTTGTACTCTCTTTTTTCTTTTTTTTTTTGGTAGAAAGGACAAGTTGTACTCTCTCAAAGTGGTCCATAATACAATAATCCTGAATTGTAATGTAAATGTAGTTCTGTTCGTAGCTCTACTATATAAGAGTTGGGGTTCGAACTCCGGATTCCCCATTTCCAAGGAATTAAAAGAATATACTTGTGTTTTTTATGATTTGGAAAAGACAAGTAAACAGCTAGGCGAACTAAAAGGCGCTACTTTGAAAAATGGTTTTCGACCATGATTACAGCCGCGACATTTAAGAATTTTAATGTTGACCACATCACAGCTACTACTGTAGCTGCATCAATTAACTGTAATTTGCTGCAATATCAATAATCACAATCACAAATTCACAATGTGTTTGCCAATATAGAAAGGCTTCTAGCAAACAAAGAAGTTTTTAGAATGTTTGCACTTGAGCAATTACAAAATATGCACGAGTGACCAAGATTAACATGAGAATGTAGTGTGAATACGAATGACTTTTATATAATTATACATGATCAACCTTAAGTCATTGCGTTTTTTATTTTCGTTTTTAGATGTGCTTGCGGATGAATGGTTGGTCACACAGGACAAGCTTAGATCAGGAATACAATTGTTAAGAAAGAAAATTAGGGTAGCTCTTGTCGTAGAAAAGACAGAAGAATATCTTCTTAGGTGATTTAGTCATGCGTGGAAAACACTCATAGATGCATTGGTAAGGATGGCTTACTAGATGGAGAATAGTTTGATTTTTAGAGGTAGAGGGAAAAAAAATCTGTTAAAAAAGCTTGAGTCATCAAATGGTTTATCTTTAAACTTAATTAACGTATGGATTTGATTTGTATCCATCGGGACTCACAGGGCTTAAACCTGCAGCTTTTCTGTATTTTGAAAGCATATATGTTCAAAAAGAACTGTTACACTGTTTCCACTTGCCGTCATTCTTAGTCTTTGCAAAAAGAACTATTAAACCTTGGCTCTTTTTTGTTACCAAGCTCTCTTCAATTAAGCAACTAGTAAATTTTTGAACTTCTAGTGTTCATTTTCACTATTTTCTTTCAGATGTAAACTTACAAATTTCTTCTTGAAGATTGAGGTTTGGTAAAGCATGTTTGACCGGAAAACTTAGCTTGAAGTTTTTTTTATTGATACTCTTTATCTTGTCTATTAGAATTCGGTTTTGCAGTATGATTCTGAAATGGTAATGTAACTGTTCTTGATTTAGGTTGAGTTGTTCAAACATCCACATTTGTTGCTGTTTCAAATAAAAAATTCCATCTTTAAACTTCCTGGTGGCCGTTTAAGGCCAGGTGAATCAGGTATGCTAGGATTAGGAATCTTTCAAACATTGACCGAGTTCGAAATGTTTGCAAATATTTTTACGAGTTTTTACTAGGGATTACATTTATTGATTTCTAGATACCGATGGATTGAAGCGTAAGCTGGCAAGGAAGCTTTCTGCTGATGAAAATTTGGCAGAATGGGAGGTATTAAATTAATCCTTTCTTTTTAAACTTAGAATCTGGTTCTGTTTTTTTATATTGATACTGTTTCTGATTTCGAATTTTGTTTGCATTTTAATTTGAACATTGTTTTAGTGATTGTAAAGTGGCTTGCATTTTATATTCTGATCAGATACTTGGTGTGCATTTTGCTAATGCTATTATTGATTGCGTACTGGTTTTTCATTTTACTATACTCAATGATGTTTGGAAGCCCAAAATTTTCTTACACCCATTGAACATCTTTTGTTTTTCCTTCTCCATCGTTCTTTTCCGATTACATCATCAACATATCGAATCTATCATACCACTCTCCATTTCTCTCTCTCACAAGGTGCCTTCTCTCGCAAGTTTGCAAGTCTGTTGAGTGTTGAGGCTATAGAATACTAGTTGTATAGTCCCTGGTCGCAGAGGTTTAGGTGCCGTAGTTGTGACGGTTTTTCAAGTATCATAGTGGAAAAATCTCACCAAGGGCAAAAACAGGTGTCACTCACATTGGGTGAACCAGTATTAAAGTTTGAATTCATTTCACGGATACCATCATCATATTTTGTTAATTCAAATACTAACACTTGAGAACATTATAAACTTAACGAAGTTTTTTTTTTCATCACCTTAATTATAGACTAATATTAAAATGGTTCACAATTCAAACTTTCCTTGTGATTTTTTCATTATCGTGCTAACAAATGTAAAGAATTTAAATTAACTATATTATTTTTTTACTATAAAATGCTATTAATTTATTTTTTTTCTCTAATTTTACCTATGAATTATACTATGTACGCTACTCACTTTTTTTTTTTAGTCAAGTATCCTAGTGGCTAGAATTCACCTTTTTCAAGATGAATAAGTGGAGTGTCCGGGGTTCGAACTCCGGCACCTGCATATAATAATGCATGTCCCTGGCAACTGAGTTATGCTCACGGGGACTACTCACTTTATTTAGAAATAGTGTACTCACTTTATTTCTATATACACTATTATGCAATCATGAAAATGAATAATCGATATTGAATAAAGATAATTTGTTAATTTTGATTCTGCTCATGTATATGGAAAAAAATCGGTTGAAAGAGTAGGACATAACTGATGTGGTCCACATGTTTTCTGACATATATTAGTCACTCTTAAACGACGATGCATACTTCATACCGATATCATACTAACAAAAAAAACTTGATACACTCATTTGTGTATATATCTATGGAAAAAGAGAGCTACGCTGAATGCTTGAATTATATGATATGATCAAGGCTGTACAAGACCTGATTCATCTGACCAAAAATTATGAAACGAGAAACAACACACTAGTAATTACAATGAATGAGGAAATAAAATAAATTGATTTTTGTTTTGAAGGAAAATAAAATAAATTGATGAATGCAATTACTAGGAAGATTTTTTTTTTTTTGAGGAAAAAATAACTAGGGAGATGTCGTTGCATTATGATGATGATTTGTGCCTTATTTATTTTATTTCCTTGACTTGAGATATTGGTCTAACATACTATTGTTTTTCTTAATATGACTAGAAAAGCTTTAACGACATTTAATTTAAAATAGATGAAGTGTAACAATCGCAGTTTAGGAGAAGAGAGGAAACTTCCTCTTGGTCAAAAACAATGACACTAATAGTAAGATTGTATTTGGTAAAAGAGCGACGCAGTTTCCCTTTGAATATTTGGTAATGTTGAATTCTATGCTACATTTTAAAATTATTTTTAGTATTATATACTTTACACAATTCTATGCATTTGATCCACCTATCTAAAAGTTCCACCCTAAAAGTTCTCTATGACCTTTTTCTTTATGAGGAATATGCTTGATGTACGTAACTACACTCCAAAAGATCAAAACCATAATTATTATCTCCATTTATTATATATATCCAAAATATGCATTCATTCATATGAGTATATCACAAACAGGTGTTTGCTATAATCCATTTCATTTCATTTTATTTCAATCCTTAATCATCATGACTAAATATGAGGTAGTTTTCATCTCTACACCAACCATTGGAAACATGGTTCCAACTGTTGAATTTGCTAACCATCTAACCAAACACCACCCTCAACTCTCTGCAACCATTCTCGTTATCACAATCCCAAAATTACCGCTCGTTAACACTTACCTTCAATCCCGTTCTTCATCCGCAACTAATCTCCGTTTCATCCACCTCCCAACCGTAGATCCTCCTGCACCCGATCAATACCGATCCTTCATAACTTACATCTCTCTCCTTATTCAGAAACACAAAACCAACATCAAAAACACACTCCTTGACCTCATAAAAACTGACTCGGTTAAACTCGCTGCTTTGTTCGTTGACATGTTCTCCACCACCATCATCGATGTAGCTAATGAGATCTCCGTCCCTTGCTACCTCTTCTTCGCGTCGCCCGCGAGTTTCCTTGGATTCACGCTCCACATTCCGAAACTTGAATCGGTTGAATCAGAAACTGAGTTTGAAATTCCGAGTTTTAGAAACCCTATTCCAAAACAGGTTTTGCCTAACATGGTTTTGAAATGGAAATCCGAAGAAGACGCTTATTCGTGGATTTCGTATCATGCGGGAAGGTACAAAGAAACCAAAGGTATTGTGGTAAATACGTTACAAGAGCTTGAACCCTATGCTCTTCAATCACTCTATGATGATTTGCAGCTTCCACCGGTTTACACAATTGGGCCGGTTATTGATCTTGTTGGACCGGCTGAATGGGATCCAAACCCGGTCCAATATAATTATATAATGGAGTGGCTCGATTTGCAGCCAGTTGCTTCTGTGGTTTTTTTATGTTTCGGTAGTTTGGGAAGTCTTGAAGTCAAACAGGTTGAGCAAATTGCTATTGGGCTTGAACGTGCCGGGGTTAGATTTTTATGGGCTTTACGTGGACCTCCGAAGGCCCAGTCAGCAGACCCAAGAGATTACACAAGTTACGAGAATGTTCTACCGAACGGGTTTTTGAAACGGACTGCGGGGATGGGTATAGTTTGTGGGTGGGTTCCACAAGCCAAGGTACTGGCCCATAAGGCAGTGGGTGGATTCGTGTCACATTGTGGTTGGAACTCGATATTGGAGAGTTTGTGGTATGGTGTGCCGATTGCCACGTGGCCGGTGTATGCAGAGCAACAATTGAACGCGTTTCAAATGGTTAGAGAATTGGGATTAGCGGTGGAGATTAGGTTGGATTATAGGGTTGGTGGAGATTTGGTGCAGGCGGAAGAAGTTGAAAATGGTGTCAGTACATTGATGAACGGCAGTGATGAGATTACGAGGAAGGTAAAAGAGATGAGAGAAAAGTGTAGAGTTTCTTTGATGGAGAACGGGTCGTCTTATACTAACCTTATGTCTCTGATTCAAGAGTTGACAAAATGATCGACCCATATTAGATATATTTTTTAGTCTAAAAAAATATATAAGATATATCAGTAGAATTTTGAATCTTGTAGGTTTAGGTTATATAGTTTTGGAATCAAAACTGGGTTGTGTAATGCTTCTATGCAAGCTGAGCAAGCCTATATTGTACTCTTTCTACATATGAATGAAATGATTTGTTCACTATAATTTTTATATAGTTTTTAAAATGCAGTTTTGACAGTGTATATGAAATGTAATTTACTTAATTTAGGTGGGAGAGTGCCTTGGAATGTGGTGGAGACCTGATTTTGAAACATTAATGTACCCTTTCTTACCTCCTAATGTCAAACATCCAAAGGTACATTTTTCAAAAGGCATTTTCTTAAGCAAGTTTTAATGTTAGATGTCATAGTTTCACGATCTATCTTCATGGTGTAGGAATGTACAAAACTTTTCCTTGTACGGCTTCCAGAAAGTCGAAGGTTCACGGTGCCAAAAAACATGAAGTTGCTATCAGTTCCGTTGTGCCAAATTCGTGACAATCACAAGGTATGAAGTATGAACAAATATGCTTGAGTTTGAGTTGATGACTGTGTTGACGCCTTAACATGTGTATTTTGCAGACATACGGGCCAATTATATCTGCGGTCCCACAGCTACTCTCGAAATTCTCTTTCAATATGATCGGAATTTAA
Protein sequence

>MS.gene22519.t1

MMGENGTRDDDDEKVEVNIYPLNSYYFGSKDAIPSKDHSLQRFKSNYDARGMRTCVEAVMMVELFKHPHLLLFQIKNSIFKLPGGRLRPGESDTDGLKRKLARKLSADENLAEWEVGECLGMWWRPDFETLMYPFLPPNVKHPKECTKLFLVRLPESRRFTVPKNMKLLSVPLCQIRDNHKTYGPIISAVPQLLSKFSFNMIGI