AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22566

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22566.t1 MTR_5g011540 97.065 511 15 0 1 511 1 511 0.0 1011
MS.gene22566.t1 MTR_6g043810 39.286 476 275 5 36 497 16 491 7.79e-104 320
MS.gene22566.t1 MTR_6g043810 39.286 476 275 5 36 497 26 501 1.08e-103 320
MS.gene22566.t1 MTR_5g067460 37.204 465 277 5 44 502 56 511 9.56e-100 311
MS.gene22566.t1 MTR_3g111020 37.372 487 284 6 13 486 15 493 3.35e-99 310
MS.gene22566.t1 MTR_5g010830 37.179 468 287 4 20 485 44 506 9.74e-98 306
MS.gene22566.t1 MTR_1g101500 37.778 495 291 7 25 506 39 529 3.32e-97 304
MS.gene22566.t1 MTR_0039s0080 35.529 501 315 6 13 510 9 504 3.71e-96 301
MS.gene22566.t1 MTR_4g027920 32.829 463 308 2 41 501 154 615 1.28e-88 284
MS.gene22566.t1 MTR_6g088805 34.664 476 299 4 18 493 10 473 3.15e-88 280
MS.gene22566.t1 MTR_8g102430 36.343 443 261 4 43 485 23 444 1.61e-87 276
MS.gene22566.t1 MTR_2g435930 31.772 491 303 4 28 497 4 483 3.01e-82 265
MS.gene22566.t1 MTR_6g081410 33.475 469 309 2 27 493 9 476 8.37e-74 241
MS.gene22566.t1 MTR_1g108810 32.391 460 305 3 22 478 12 468 6.42e-73 239
MS.gene22566.t1 MTR_6g081810 32.692 468 280 4 21 482 1 439 3.75e-69 229
MS.gene22566.t1 MTR_8g106670 32.071 449 298 5 38 483 7 451 1.44e-67 225
MS.gene22566.t1 MTR_6g081780 31.702 470 318 2 27 494 9 477 1.78e-67 225
MS.gene22566.t1 MTR_6g004220 32.391 460 298 5 30 483 11 463 3.41e-66 221
MS.gene22566.t1 MTR_1g108840 30.189 477 325 3 9 483 10 480 2.12e-64 217
MS.gene22566.t1 MTR_6g081300 31.965 463 302 6 43 498 10 466 4.11e-64 216
MS.gene22566.t1 MTR_6g004220 32.088 455 296 5 30 478 18 465 6.91e-64 216
MS.gene22566.t1 MTR_6g066380 32.719 434 289 2 51 482 35 467 2.24e-63 214
MS.gene22566.t1 MTR_2g078930 30.285 492 317 6 17 495 10 488 3.29e-63 214
MS.gene22566.t1 MTR_7g082810 29.607 483 312 7 30 501 7 472 1.46e-60 207
MS.gene22566.t1 MTR_2g078960 32.127 442 295 3 38 477 28 466 2.10e-59 204
MS.gene22566.t1 MTR_6g081400 30.201 447 304 5 41 483 13 455 1.30e-58 201
MS.gene22566.t1 MTR_2g079020 29.828 466 304 6 38 495 32 482 9.48e-58 200
MS.gene22566.t1 MTR_2g078970 30.435 460 309 4 38 495 26 476 3.30e-56 195
MS.gene22566.t1 MTR_6g081310 31.429 455 286 8 68 502 21 469 3.63e-56 195
MS.gene22566.t1 MTR_6g081390 29.047 451 304 7 41 483 10 452 1.84e-55 192
MS.gene22566.t1 MTR_2g022980 28.425 489 329 5 12 483 3 487 9.30e-55 191
MS.gene22566.t1 MTR_6g081240 30.000 440 299 6 43 478 10 444 1.57e-53 187
MS.gene22566.t1 MTR_2g088400 30.248 443 301 4 44 481 53 492 1.24e-52 186
MS.gene22566.t1 MTR_7g082800 30.923 401 261 4 102 497 1 390 9.66e-52 181
MS.gene22566.t1 MTR_4g048000 29.638 442 306 3 44 483 65 503 5.00e-51 182
MS.gene22566.t1 MTR_6g004220 32.353 374 240 5 30 397 18 384 1.02e-48 174
MS.gene22566.t1 MTR_1g109060 29.754 447 301 6 43 483 24 463 1.07e-48 175
MS.gene22566.t1 MTR_1g108990 30.180 444 303 4 43 483 25 464 1.28e-48 174
MS.gene22566.t1 MTR_2g088400 30.049 406 279 3 44 447 53 455 2.66e-48 173
MS.gene22566.t1 MTR_1g021740 27.430 463 328 4 25 483 15 473 1.46e-47 172
MS.gene22566.t1 MTR_1g109060 29.792 433 292 5 43 470 24 449 2.82e-47 171
MS.gene22566.t1 MTR_5g033100 26.639 488 334 7 12 483 15 494 2.85e-43 160
MS.gene22566.t1 MTR_8g069470 28.381 451 312 6 37 483 45 488 7.68e-42 157
MS.gene22566.t1 MTR_5g090290 27.549 461 324 5 40 498 43 495 8.25e-39 149
MS.gene22566.t1 MTR_8g063590 26.292 445 324 3 40 482 50 492 9.09e-39 148
MS.gene22566.t1 MTR_5g032720 26.852 432 313 2 54 484 47 476 2.44e-38 147
MS.gene22566.t1 MTR_1g100180 26.439 469 335 5 38 502 39 501 9.05e-38 145
MS.gene22566.t1 MTR_6g004220 32.886 298 187 5 30 321 18 308 3.05e-37 140
MS.gene22566.t1 MTR_3g099720 26.033 484 350 4 8 489 8 485 1.17e-36 142
MS.gene22566.t1 MTR_7g087400 27.115 461 313 6 33 483 20 467 1.67e-36 141
MS.gene22566.t1 MTR_6g047610 27.406 478 316 10 31 493 20 481 2.03e-36 141
MS.gene22566.t1 MTR_5g032750 26.566 463 334 3 26 484 16 476 7.07e-36 139
MS.gene22566.t1 MTR_7g087410 26.105 475 321 7 43 504 31 488 3.62e-34 135
MS.gene22566.t1 MTR_6g027200 29.688 448 299 8 43 483 36 474 3.05e-33 132
MS.gene22566.t1 MTR_6g027190 28.000 450 304 8 43 483 24 462 3.54e-33 132
MS.gene22566.t1 MTR_6g047590 27.119 472 317 8 31 489 20 477 5.02e-33 131
MS.gene22566.t1 MTR_3g099700 27.202 511 339 11 9 501 7 502 6.57e-33 131
MS.gene22566.t1 MTR_7g087430 25.899 417 284 5 102 509 1 401 1.90e-31 125
MS.gene22566.t1 MTR_6g047640 26.875 480 326 8 26 494 18 483 5.87e-31 125
MS.gene22566.t1 MTR_7g087370 24.949 489 311 8 28 506 15 457 6.54e-31 125
MS.gene22566.t1 MTR_6g047640 26.250 480 310 10 26 494 18 464 8.75e-31 125
MS.gene22566.t1 MTR_2g078990 28.296 311 212 4 187 495 4 305 3.69e-29 117
MS.gene22566.t1 MTR_5g087930 25.740 439 293 9 68 498 51 464 7.30e-29 119
MS.gene22566.t1 MTR_7g087410 25.610 410 281 6 105 504 4 399 9.72e-28 115
MS.gene22566.t1 MTR_2g079030 30.846 201 127 2 283 477 319 513 2.76e-24 106
MS.gene22566.t1 MTR_5g090280 23.474 426 277 10 102 493 1 411 7.40e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22566.t1 AT4G22790 58.664 479 196 2 16 493 3 480 0.0 563
MS.gene22566.t1 AT1G71870 37.895 475 278 5 35 492 15 489 3.57e-99 308
MS.gene22566.t1 AT4G29140 34.731 501 292 8 24 500 34 523 7.58e-95 298
MS.gene22566.t1 AT1G58340 39.520 458 266 3 43 495 57 508 2.50e-93 294
MS.gene22566.t1 AT5G19700 37.310 461 284 3 36 494 28 485 4.97e-93 293
MS.gene22566.t1 AT5G52050 31.703 511 332 6 11 510 1 505 2.62e-90 285
MS.gene22566.t1 AT4G23030 36.952 479 291 5 30 502 15 488 1.21e-83 268
MS.gene22566.t1 AT2G38510 31.712 473 318 4 41 511 3 472 5.15e-83 266
MS.gene22566.t1 AT5G49130 33.970 471 298 2 35 492 17 487 5.73e-83 266
MS.gene22566.t1 AT2G04040 33.184 446 291 3 41 483 24 465 6.84e-68 226
MS.gene22566.t1 AT1G66760 30.398 477 325 3 18 491 2 474 1.16e-67 226
MS.gene22566.t1 AT5G52450 31.906 467 312 4 38 501 20 483 2.54e-65 219
MS.gene22566.t1 AT1G66760 30.388 464 316 3 18 478 2 461 6.08e-65 218
MS.gene22566.t1 AT2G04080 30.454 463 315 3 24 483 7 465 3.86e-63 213
MS.gene22566.t1 AT2G34360 29.622 476 315 8 33 501 16 478 1.37e-62 212
MS.gene22566.t1 AT1G71140 30.131 458 312 4 29 483 12 464 1.88e-61 209
MS.gene22566.t1 AT2G04070 30.670 463 314 3 24 483 7 465 2.01e-61 209
MS.gene22566.t1 AT2G04080 30.108 465 318 3 24 485 7 467 3.95e-61 208
MS.gene22566.t1 AT1G15160 30.543 442 290 4 68 502 55 486 5.31e-61 208
MS.gene22566.t1 AT1G64820 31.635 471 301 6 33 492 18 478 6.09e-61 208
MS.gene22566.t1 AT2G04100 30.562 445 304 2 41 483 27 468 7.37e-61 207
MS.gene22566.t1 AT1G15150 30.064 469 311 4 41 502 28 486 1.26e-60 207
MS.gene22566.t1 AT1G66780 32.791 430 277 4 68 494 59 479 5.95e-60 205
MS.gene22566.t1 AT1G73700 30.335 478 317 7 24 494 7 475 2.34e-59 203
MS.gene22566.t1 AT1G15170 31.991 447 289 4 44 483 34 472 4.02e-59 203
MS.gene22566.t1 AT2G04050 31.303 476 303 5 21 483 1 465 6.43e-59 202
MS.gene22566.t1 AT2G04100 30.000 440 303 2 41 478 27 463 2.77e-58 200
MS.gene22566.t1 AT2G04090 29.213 445 310 2 41 483 27 468 2.75e-57 198
MS.gene22566.t1 AT1G15180 31.707 451 293 4 40 483 31 473 5.68e-55 192
MS.gene22566.t1 AT2G34360 28.361 476 279 9 33 501 16 436 8.41e-55 190
MS.gene22566.t1 AT3G23550 30.612 441 299 5 43 480 30 466 1.33e-51 182
MS.gene22566.t1 AT1G66760 29.798 396 271 3 18 410 2 393 7.90e-51 178
MS.gene22566.t1 AT1G61890 28.228 457 311 6 44 493 47 493 1.03e-50 181
MS.gene22566.t1 AT1G11670 28.188 447 306 5 44 483 50 488 1.47e-50 181
MS.gene22566.t1 AT1G61890 28.054 442 303 5 44 478 47 480 1.50e-48 175
MS.gene22566.t1 AT1G15170 30.726 358 233 4 133 483 4 353 5.01e-47 167
MS.gene22566.t1 AT1G47530 27.872 470 326 4 19 483 11 472 1.55e-46 169
MS.gene22566.t1 AT3G26590 27.766 479 325 8 33 501 28 495 1.44e-45 167
MS.gene22566.t1 AT1G61890 28.842 423 292 5 44 462 47 464 1.49e-45 166
MS.gene22566.t1 AT3G21690 29.322 457 315 4 44 495 52 505 1.66e-45 167
MS.gene22566.t1 AT3G23560 29.186 442 308 3 38 477 33 471 1.90e-45 166
MS.gene22566.t1 AT1G15150 28.912 377 251 4 133 502 4 370 5.06e-45 162
MS.gene22566.t1 AT4G21910 26.697 442 318 4 44 483 55 492 7.58e-44 162
MS.gene22566.t1 AT4G21910 26.697 442 318 4 44 483 55 492 7.58e-44 162
MS.gene22566.t1 AT1G12950 28.330 473 305 12 43 498 62 517 2.75e-43 161
MS.gene22566.t1 AT4G21910 27.088 443 315 5 44 483 57 494 8.96e-43 159
MS.gene22566.t1 AT4G21910 27.088 443 315 5 44 483 57 494 8.96e-43 159
MS.gene22566.t1 AT5G38030 27.079 469 329 5 24 483 18 482 2.26e-41 155
MS.gene22566.t1 AT3G26590 28.321 399 275 4 105 501 4 393 6.47e-41 152
MS.gene22566.t1 AT4G00350 24.440 491 341 5 11 483 46 524 2.25e-40 153
MS.gene22566.t1 AT4G21903 26.812 414 297 4 72 483 81 490 1.06e-39 150
MS.gene22566.t1 AT5G10420 28.540 452 305 6 54 499 48 487 1.55e-39 150
MS.gene22566.t1 AT5G44050 28.918 453 307 7 46 493 46 488 6.74e-39 148
MS.gene22566.t1 AT1G23300 26.793 474 323 8 51 510 51 514 3.54e-38 147
MS.gene22566.t1 AT4G21903 26.506 415 299 4 72 484 81 491 4.98e-38 146
MS.gene22566.t1 AT3G23560 30.058 346 237 3 38 381 33 375 3.54e-37 142
MS.gene22566.t1 AT4G21903 27.034 381 273 3 105 483 4 381 5.50e-37 141
MS.gene22566.t1 AT3G59030 25.629 437 313 6 68 501 75 502 1.41e-36 142
MS.gene22566.t1 AT5G65380 27.273 462 323 6 28 483 21 475 4.85e-36 140
MS.gene22566.t1 AT1G47530 27.604 384 266 3 105 483 4 380 1.63e-35 137
MS.gene22566.t1 AT4G25640 25.630 476 331 5 21 481 1 468 2.47e-34 135
MS.gene22566.t1 AT4G25640 25.630 476 331 5 21 481 1 468 3.20e-34 135
MS.gene22566.t1 AT1G33100 27.556 450 312 6 41 482 26 469 1.01e-33 134
MS.gene22566.t1 AT1G33110 28.959 442 292 6 51 482 43 472 4.87e-33 132
MS.gene22566.t1 AT1G33090 27.434 452 310 5 41 482 29 472 5.97e-33 131
MS.gene22566.t1 AT1G66760 27.893 337 236 3 145 478 1 333 2.27e-32 127
MS.gene22566.t1 AT4G25640 25.450 444 308 5 21 449 1 436 3.41e-31 126
MS.gene22566.t1 AT3G03620 26.190 462 323 7 28 481 21 472 6.88e-31 125
MS.gene22566.t1 AT3G03620 26.190 462 323 7 28 481 21 472 6.88e-31 125
MS.gene22566.t1 AT5G17700 25.263 475 324 9 30 492 20 475 7.55e-31 125
MS.gene22566.t1 AT5G17700 25.263 475 324 9 30 492 20 475 7.55e-31 125
MS.gene22566.t1 AT1G15180 29.779 272 176 4 133 397 4 267 8.93e-30 121
MS.gene22566.t1 AT1G33080 26.126 444 310 6 51 486 43 476 8.22e-29 119
MS.gene22566.t1 AT1G33080 25.909 440 308 6 51 482 43 472 3.55e-28 117
MS.gene22566.t1 AT3G59030 25.740 338 244 5 68 402 75 408 2.39e-23 102
MS.gene22566.t1 AT1G33110 29.834 362 232 6 51 402 43 392 4.48e-23 101
MS.gene22566.t1 AT5G17700 25.455 385 261 8 30 402 20 390 6.95e-21 95.1

Find 121 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGCTGCAAGGGGAATTT+GGG 0.166621 5.2:+4241311 MS.gene22566:CDS
CTCTTCTTTGGACTTCTTAC+TGG 0.194547 5.2:+4241561 MS.gene22566:CDS
GGCCTTGTTGGACTCTTCTT+TGG 0.195245 5.2:+4241549 MS.gene22566:CDS
TTCACTTTCGCTAACGTTAC+TGG 0.209280 5.2:+4240472 MS.gene22566:CDS
TGGTGGCTGCAAGGGGAATT+TGG 0.224291 5.2:+4241310 MS.gene22566:CDS
TCTTATTGTTGTTGTTCTTC+TGG 0.235360 5.2:+4240906 MS.gene22566:CDS
AGCTTAGCCGGTGGCGCGCT+CGG 0.247230 5.2:+4240448 MS.gene22566:CDS
ATGTCATCAACATGCAAATT+AGG 0.269692 5.2:+4240211 MS.gene22566:CDS
GAAATTCTAGTCTTGCTTAC+TGG 0.273403 5.2:+4241075 MS.gene22566:CDS
CTCTAGAATTAAAACATAAA+TGG 0.277546 5.2:-4240929 None:intergenic
CTTCCTACCATGTTTAGTTC+TGG 0.293099 5.2:+4240793 MS.gene22566:CDS
TGAAGCCACATGAAAGTAAT+AGG 0.326554 5.2:-4240625 None:intergenic
CATGATAGGGGCACTATAAA+TGG 0.328539 5.2:+4241348 MS.gene22566:CDS
AAGCTTCGTCTTGGCCTTGT+TGG 0.336381 5.2:+4241537 MS.gene22566:CDS
CAAGAAATTTCCACTGTTGC+TGG 0.340485 5.2:+4240682 MS.gene22566:CDS
TTTGAGAGTAGTATGTTAAC+AGG 0.351355 5.2:-4240838 None:intergenic
CCATGAGCCTGTCCACAAAT+AGG 0.351874 5.2:-4240532 None:intergenic
CACAGGGAACTTCTTTAACT+TGG 0.357675 5.2:-4241677 None:intergenic
GCTTAGCCGGTGGCGCGCTC+GGG 0.363500 5.2:+4240449 MS.gene22566:CDS
AGAGTATTATGGATTGGATT+AGG 0.376619 5.2:+4240995 MS.gene22566:CDS
TGCTGTTGTGATTGCTGTCT+TGG 0.380543 5.2:-4240401 None:intergenic
CAGTGGAAATTTCTTGTTGT+TGG 0.381992 5.2:-4240675 None:intergenic
TTTCTCAGTGATGCTGTCAT+TGG 0.384106 5.2:+4241164 MS.gene22566:CDS
GCTAAATTCATCAACATCAT+TGG 0.390023 5.2:-4240370 None:intergenic
GAGGGGTTTCCATGGCTGTT+TGG 0.394339 5.2:+4240875 MS.gene22566:CDS
ATTAGGCTAATCAAGCTATC+TGG 0.398009 5.2:+4241012 MS.gene22566:CDS
GGCAACTCTTCAGCCATGAT+AGG 0.398212 5.2:+4241334 MS.gene22566:CDS
GTGGCTGCAAGGGGAATTTG+GGG 0.399284 5.2:+4241312 MS.gene22566:CDS
ACTGGCTTCTCTGTCTTGAA+TGG 0.406137 5.2:+4240490 MS.gene22566:CDS
TCAGAGGAGCTAAGAATTCA+AGG 0.406276 5.2:+4240334 MS.gene22566:CDS
GACAATTGTACTGTTGCTAT+TGG 0.410125 5.2:+4240594 MS.gene22566:CDS
CGCAGGTTGCACCGGCAGCT+TGG 0.414906 5.2:+4241284 MS.gene22566:CDS
GCTTGGTGATGGTGGCTGCA+AGG 0.424849 5.2:+4241301 MS.gene22566:CDS
CGCAAACGCCAAGCAAGCAT+TGG 0.427319 5.2:+4241104 MS.gene22566:CDS
CGCCAAGCTCGTTTGAGACA+CGG 0.430905 5.2:-4241203 None:intergenic
TGGGTTTGTAATGGTGGAGG+AGG 0.431977 5.2:-4240277 None:intergenic
CTTGGTGATGGTGGCTGCAA+GGG 0.432045 5.2:+4241302 MS.gene22566:CDS
TATTATTAGTATTCATTGCT+AGG 0.432752 5.2:+4241604 MS.gene22566:CDS
AGGGACAGCTCGACCTTGGT+TGG 0.445218 5.2:+4241449 MS.gene22566:CDS
TGGTACTTCTGCGTCATCAC+AGG 0.449230 5.2:-4241694 None:intergenic
GCGCGTGTGTCTCTAGGAAT+AGG 0.451272 5.2:+4241255 MS.gene22566:CDS
TTTGCCTTCAAGCTTCGTCT+TGG 0.451622 5.2:+4241528 MS.gene22566:CDS
CATTTATAGTGCCCCTATCA+TGG 0.457544 5.2:-4241347 None:intergenic
ACCGGTACGCTCGGTCGGCT+TGG 0.459703 5.2:-4241230 None:intergenic
TAAAACTCCCAATGCTTGCT+TGG 0.462126 5.2:-4241112 None:intergenic
TCTAGAGAATCGAAAGGTAT+TGG 0.462933 5.2:+4240945 MS.gene22566:CDS
ACTTGCTAATATTTGTGCCT+TGG 0.463290 5.2:-4241649 None:intergenic
CGGTCAGCGCGTGTGTCTCT+AGG 0.465994 5.2:+4241249 MS.gene22566:CDS
TCTGAAAGCAGCGTCTTCGC+TGG 0.467091 5.2:-4240316 None:intergenic
TTGGGTATGTATGCAAATCT+AGG 0.477841 5.2:+4241468 MS.gene22566:CDS
CGTGGAAAGAAGGAGGATGG+TGG 0.478669 5.2:+4240968 MS.gene22566:CDS
ATGGTGGGATCAGAGTATTA+TGG 0.479182 5.2:+4240984 MS.gene22566:CDS
CTAGGTGAGCTCAGCTTAGC+CGG 0.481845 5.2:+4240436 MS.gene22566:CDS
GCAACTCTTCAGCCATGATA+GGG 0.483823 5.2:+4241335 MS.gene22566:CDS
AGTGACATAACAAACAAATC+AGG 0.486224 5.2:-4240727 None:intergenic
GAATGGTCTCTGTGGTGCCA+TGG 0.486890 5.2:+4240507 MS.gene22566:CDS
TTGTTGTCTCAACACATGTA+TGG 0.488430 5.2:+4241038 MS.gene22566:CDS
GGGACAGCTCGACCTTGGTT+GGG 0.495004 5.2:+4241450 MS.gene22566:CDS
GGGATCAGAGTATTATGGAT+TGG 0.495416 5.2:+4240989 MS.gene22566:CDS
ACCCGTGTCTCAAACGAGCT+TGG 0.500843 5.2:+4241201 MS.gene22566:CDS
CCTATTTGTGGACAGGCTCA+TGG 0.501376 5.2:+4240532 MS.gene22566:CDS
TATTCATTGCTAGGATAAAG+TGG 0.503924 5.2:+4241613 MS.gene22566:CDS
AAGGCCAAGACGAAGCTTGA+AGG 0.508427 5.2:-4241532 None:intergenic
GGGTCTAAGAGGGGTTTCCA+TGG 0.510224 5.2:+4240867 MS.gene22566:CDS
GCCAAGCTCGTTTGAGACAC+GGG 0.510977 5.2:-4241202 None:intergenic
AGTGAACCCGAGCGCGCCAC+CGG 0.515331 5.2:-4240455 None:intergenic
AAGGTATTGGCGTGGAAAGA+AGG 0.518806 5.2:+4240958 MS.gene22566:CDS
GCAAACGCCAAGCAAGCATT+GGG 0.519010 5.2:+4241105 MS.gene22566:CDS
AGCCACCATCACCAAGCTGC+CGG 0.520002 5.2:-4241295 None:intergenic
CACGCGCTGACCGGTACGCT+CGG 0.520838 5.2:-4241239 None:intergenic
CATGGAACCTATTTGTGGAC+AGG 0.523239 5.2:+4240525 MS.gene22566:CDS
TTGCACCGGCAGCTTGGTGA+TGG 0.528564 5.2:+4241290 MS.gene22566:CDS
GTGGAGGAGGTGACATTGGT+TGG 0.531112 5.2:-4240264 None:intergenic
TTCGAGGGACAGCTCGACCT+TGG 0.533695 5.2:+4241445 MS.gene22566:CDS
CACCGGCAGCTTGGTGATGG+TGG 0.540745 5.2:+4241293 MS.gene22566:CDS
CTAGAGACACACGCGCTGAC+CGG 0.547309 5.2:-4241248 None:intergenic
AGCGAAGACGCTGCTTTCAG+AGG 0.548362 5.2:+4240318 MS.gene22566:CDS
TGATGTTGATGAATTTAGCT+TGG 0.549712 5.2:+4240374 MS.gene22566:CDS
GTTTGTGGAGGCATAGTTCG+AGG 0.549958 5.2:+4241429 MS.gene22566:CDS
ATGCCTCCACAAACTGCCAA+TGG 0.550253 5.2:-4241420 None:intergenic
ATCAGTTATCCAAACAGCCA+TGG 0.552397 5.2:-4240884 None:intergenic
TGGCGTGGAAAGAAGGAGGA+TGG 0.552982 5.2:+4240965 MS.gene22566:CDS
AATGGTGGAGGAGGTGACAT+TGG 0.553401 5.2:-4240268 None:intergenic
AATGTTGTTGATGGCTCTAG+TGG 0.559949 5.2:+4241383 MS.gene22566:CDS
GTATGTATGCAAATCTAGGC+GGG 0.568375 5.2:+4241472 MS.gene22566:CDS
CGCTGACCGGTACGCTCGGT+CGG 0.568556 5.2:-4241235 None:intergenic
CTTGCTTGGCGTTTGCGAGG+TGG 0.568986 5.2:-4241098 None:intergenic
GGTGCCATGGAACCTATTTG+TGG 0.570180 5.2:+4240520 MS.gene22566:CDS
GTGGAAAGAAGGAGGATGGT+GGG 0.570875 5.2:+4240969 MS.gene22566:CDS
CTGTCCACAAATAGGTTCCA+TGG 0.574641 5.2:-4240524 None:intergenic
CAATTCCTATTACTTTCATG+TGG 0.579908 5.2:+4240620 MS.gene22566:CDS
ACCAAGCCGACCGAGCGTAC+CGG 0.581822 5.2:+4241229 MS.gene22566:CDS
GGAAACCCCTCTTAGACCCA+TGG 0.585351 5.2:-4240863 None:intergenic
TTTCCATTGGCAGTTTGTGG+AGG 0.586502 5.2:+4241417 MS.gene22566:CDS
TGGCTGCAAGGGGAATTTGG+GGG 0.591531 5.2:+4241313 MS.gene22566:CDS
AACATAAGTACCAGCAACAG+TGG 0.598946 5.2:-4240692 None:intergenic
GTGGGTGGAAGAAGCTGCCA+AGG 0.602858 5.2:+4241632 MS.gene22566:CDS
TTGGTGATGGTGGCTGCAAG+GGG 0.610161 5.2:+4241303 MS.gene22566:CDS
ATGCTTGCTTGGCGTTTGCG+AGG 0.612886 5.2:-4241101 None:intergenic
ACACCAGAACTAAACATGGT+AGG 0.622764 5.2:-4240796 None:intergenic
TTTAATTCTAGAGAATCGAA+AGG 0.625448 5.2:+4240939 MS.gene22566:CDS
GGTACTTCTGCGTCATCACA+GGG 0.629425 5.2:-4241693 None:intergenic
GTATTGGCGTGGAAAGAAGG+AGG 0.632332 5.2:+4240961 MS.gene22566:CDS
ATTCATTGCTAGGATAAAGT+GGG 0.633439 5.2:+4241614 MS.gene22566:CDS
CAACTCTTCAGCCATGATAG+GGG 0.633765 5.2:+4241336 MS.gene22566:CDS
GGTGAGCTCAGCTTAGCCGG+TGG 0.638224 5.2:+4240439 MS.gene22566:CDS
TTTGTGGAGGCATAGTTCGA+GGG 0.638241 5.2:+4241430 MS.gene22566:CDS
GACACGGGTGGAAACACAAG+TGG 0.646609 5.2:-4241187 None:intergenic
TGCTACACCAGAACTAAACA+TGG 0.651792 5.2:-4240800 None:intergenic
GTCCAAAGAAGAGTCCAACA+AGG 0.652628 5.2:-4241551 None:intergenic
CATTGCTAGGATAAAGTGGG+TGG 0.653404 5.2:+4241617 MS.gene22566:CDS
TCTGTCTTGAATGGTCTCTG+TGG 0.655881 5.2:+4240499 MS.gene22566:CDS
AGAATCGAAAGGTATTGGCG+TGG 0.660271 5.2:+4240950 MS.gene22566:CDS
TCAACACATGTATGGAGTGG+TGG 0.666907 5.2:+4241046 MS.gene22566:CDS
TCATGAGAAGTGTCTTGTGA+AGG 0.670945 5.2:-4240573 None:intergenic
ATAGTCAAAGTTCAACACAA+TGG 0.680940 5.2:-4241136 None:intergenic
GTCTCAACACATGTATGGAG+TGG 0.690627 5.2:+4241043 MS.gene22566:CDS
AAGCTCGTTTGAGACACGGG+TGG 0.702539 5.2:-4241199 None:intergenic
GGTATGTATGCAAATCTAGG+CGG 0.704766 5.2:+4241471 MS.gene22566:CDS
TGACGCAGAAGTACCAACTG+AGG 0.735542 5.2:+4241701 MS.gene22566:CDS
TTTGCATACATACCCAACCA+AGG 0.735927 5.2:-4241462 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTAGTATTCATTGCT+AGG + chr5.2:4241604-4241623 MS.gene22566:CDS 20.0%
!!! CTCTAGAATTAAAACATAAA+TGG - chr5.2:4240932-4240951 None:intergenic 20.0%
!!! GACAAAATTTTGATTCATTT+TGG + chr5.2:4240652-4240671 MS.gene22566:CDS 20.0%
! AAAAAAGACAATGTTGTTGA+TGG + chr5.2:4241374-4241393 MS.gene22566:CDS 25.0%
!! TTTAATTCTAGAGAATCGAA+AGG + chr5.2:4240939-4240958 MS.gene22566:CDS 25.0%
AGTGACATAACAAACAAATC+AGG - chr5.2:4240730-4240749 None:intergenic 30.0%
ATACTACTCTCAAAAACCAT+GGG + chr5.2:4240847-4240866 MS.gene22566:CDS 30.0%
ATAGTCAAAGTTCAACACAA+TGG - chr5.2:4241139-4241158 None:intergenic 30.0%
ATGTCATCAACATGCAAATT+AGG + chr5.2:4240211-4240230 MS.gene22566:CDS 30.0%
ATTCATTGCTAGGATAAAGT+GGG + chr5.2:4241614-4241633 MS.gene22566:CDS 30.0%
CAATTCCTATTACTTTCATG+TGG + chr5.2:4240620-4240639 MS.gene22566:CDS 30.0%
GCTAAATTCATCAACATCAT+TGG - chr5.2:4240373-4240392 None:intergenic 30.0%
TATTCATTGCTAGGATAAAG+TGG + chr5.2:4241613-4241632 MS.gene22566:CDS 30.0%
TTTGAGAGTAGTATGTTAAC+AGG - chr5.2:4240841-4240860 None:intergenic 30.0%
! TCTTATTGTTGTTGTTCTTC+TGG + chr5.2:4240906-4240925 MS.gene22566:CDS 30.0%
! TGATGTTGATGAATTTAGCT+TGG + chr5.2:4240374-4240393 MS.gene22566:CDS 30.0%
!! AGAGTATTATGGATTGGATT+AGG + chr5.2:4240995-4241014 MS.gene22566:CDS 30.0%
!! GGAGTTGTTTAATTTTCCAT+TGG + chr5.2:4241404-4241423 MS.gene22566:CDS 30.0%
!!! ACATTGGTTGGTTAGTTTTA+TGG - chr5.2:4240255-4240274 None:intergenic 30.0%
!!! TAGTTTTATGGTTTGAGCTA+AGG - chr5.2:4240243-4240262 None:intergenic 30.0%
!!! TCACATTTTTGGGTTTGTAA+TGG - chr5.2:4240289-4240308 None:intergenic 30.0%
ATTAGGCTAATCAAGCTATC+TGG + chr5.2:4241012-4241031 MS.gene22566:CDS 35.0%
CATACTACTCTCAAAAACCA+TGG + chr5.2:4240846-4240865 MS.gene22566:CDS 35.0%
GACAATTGTACTGTTGCTAT+TGG + chr5.2:4240594-4240613 MS.gene22566:CDS 35.0%
TGAAGCCACATGAAAGTAAT+AGG - chr5.2:4240628-4240647 None:intergenic 35.0%
TTGGGTATGTATGCAAATCT+AGG + chr5.2:4241468-4241487 MS.gene22566:CDS 35.0%
TTGTTGTCTCAACACATGTA+TGG + chr5.2:4241038-4241057 MS.gene22566:CDS 35.0%
! AATTTTCCATTGGCAGTTTG+TGG + chr5.2:4241414-4241433 MS.gene22566:CDS 35.0%
! ACTTGCTAATATTTGTGCCT+TGG - chr5.2:4241652-4241671 None:intergenic 35.0%
! AGAGCTCAAGTAAGCTTTTA+AGG - chr5.2:4240761-4240780 None:intergenic 35.0%
! AGCAATCACAACAGCATTTT+TGG + chr5.2:4240408-4240427 MS.gene22566:CDS 35.0%
! CAGTGGAAATTTCTTGTTGT+TGG - chr5.2:4240678-4240697 None:intergenic 35.0%
! GAGCTCAAGTAAGCTTTTAA+GGG - chr5.2:4240760-4240779 None:intergenic 35.0%
! GCAATCACAACAGCATTTTT+GGG + chr5.2:4240409-4240428 MS.gene22566:CDS 35.0%
! TCTAGAGAATCGAAAGGTAT+TGG + chr5.2:4240945-4240964 MS.gene22566:CDS 35.0%
! TGGATTTGCGTCACATTTTT+GGG - chr5.2:4240299-4240318 None:intergenic 35.0%
!! GAAATTCTAGTCTTGCTTAC+TGG + chr5.2:4241075-4241094 MS.gene22566:CDS 35.0%
!!! CATTTTTGGGTTTGTAATGG+TGG - chr5.2:4240286-4240305 None:intergenic 35.0%
AAAAACCATGGGTCTAAGAG+GGG + chr5.2:4240858-4240877 MS.gene22566:CDS 40.0%
AACATAAGTACCAGCAACAG+TGG - chr5.2:4240695-4240714 None:intergenic 40.0%
AAGGCAAAAACAACACCAAG+GGG - chr5.2:4241516-4241535 None:intergenic 40.0%
ACACCAGAACTAAACATGGT+AGG - chr5.2:4240799-4240818 None:intergenic 40.0%
ATCAGTTATCCAAACAGCCA+TGG - chr5.2:4240887-4240906 None:intergenic 40.0%
CAAAAACCATGGGTCTAAGA+GGG + chr5.2:4240857-4240876 MS.gene22566:CDS 40.0%
CAAGAAATTTCCACTGTTGC+TGG + chr5.2:4240682-4240701 MS.gene22566:CDS 40.0%
CACAGGGAACTTCTTTAACT+TGG - chr5.2:4241680-4241699 None:intergenic 40.0%
CATTTATAGTGCCCCTATCA+TGG - chr5.2:4241350-4241369 None:intergenic 40.0%
CTCTTCTTTGGACTTCTTAC+TGG + chr5.2:4241561-4241580 MS.gene22566:CDS 40.0%
GAAGGCAAAAACAACACCAA+GGG - chr5.2:4241517-4241536 None:intergenic 40.0%
GGTATGTATGCAAATCTAGG+CGG + chr5.2:4241471-4241490 MS.gene22566:CDS 40.0%
GTATGTATGCAAATCTAGGC+GGG + chr5.2:4241472-4241491 MS.gene22566:CDS 40.0%
TAAAACTCCCAATGCTTGCT+TGG - chr5.2:4241115-4241134 None:intergenic 40.0%
TCAAAAACCATGGGTCTAAG+AGG + chr5.2:4240856-4240875 MS.gene22566:CDS 40.0%
TCAGAGGAGCTAAGAATTCA+AGG + chr5.2:4240334-4240353 MS.gene22566:CDS 40.0%
TGAAGGCAAAAACAACACCA+AGG - chr5.2:4241518-4241537 None:intergenic 40.0%
TGCTACACCAGAACTAAACA+TGG - chr5.2:4240803-4240822 None:intergenic 40.0%
TTCACTTTCGCTAACGTTAC+TGG + chr5.2:4240472-4240491 MS.gene22566:CDS 40.0%
TTTCTCAGTGATGCTGTCAT+TGG + chr5.2:4241164-4241183 MS.gene22566:CDS 40.0%
TTTGCATACATACCCAACCA+AGG - chr5.2:4241465-4241484 None:intergenic 40.0%
! ATGGTGGGATCAGAGTATTA+TGG + chr5.2:4240984-4241003 MS.gene22566:CDS 40.0%
! CTGGATTTGCGTCACATTTT+TGG - chr5.2:4240300-4240319 None:intergenic 40.0%
! CTTCCTACCATGTTTAGTTC+TGG + chr5.2:4240793-4240812 MS.gene22566:CDS 40.0%
! GGGATCAGAGTATTATGGAT+TGG + chr5.2:4240989-4241008 MS.gene22566:CDS 40.0%
!! AATGTTGTTGATGGCTCTAG+TGG + chr5.2:4241383-4241402 MS.gene22566:CDS 40.0%
!! CATGATAGGGGCACTATAAA+TGG + chr5.2:4241348-4241367 MS.gene22566:CDS 40.0%
!! CTAGGAATAGGTTTTATCGC+AGG + chr5.2:4241267-4241286 MS.gene22566:CDS 40.0%
!! TCATGAGAAGTGTCTTGTGA+AGG - chr5.2:4240576-4240595 None:intergenic 40.0%
!!! TCTAGGCGGGTTTTATTTTC+TGG + chr5.2:4241485-4241504 MS.gene22566:CDS 40.0%
!!! TTTTGGGTTTGTAATGGTGG+AGG - chr5.2:4240283-4240302 None:intergenic 40.0%
CAACTCTTCAGCCATGATAG+GGG + chr5.2:4241336-4241355 MS.gene22566:CDS 45.0%
CATGGAACCTATTTGTGGAC+AGG + chr5.2:4240525-4240544 MS.gene22566:CDS 45.0%
CATTGCTAGGATAAAGTGGG+TGG + chr5.2:4241617-4241636 MS.gene22566:CDS 45.0%
CTGTCCACAAATAGGTTCCA+TGG - chr5.2:4240527-4240546 None:intergenic 45.0%
GCAACTCTTCAGCCATGATA+GGG + chr5.2:4241335-4241354 MS.gene22566:CDS 45.0%
GTCCAAAGAAGAGTCCAACA+AGG - chr5.2:4241554-4241573 None:intergenic 45.0%
GTCTCAACACATGTATGGAG+TGG + chr5.2:4241043-4241062 MS.gene22566:CDS 45.0%
TCAACACATGTATGGAGTGG+TGG + chr5.2:4241046-4241065 MS.gene22566:CDS 45.0%
TCTGTCTTGAATGGTCTCTG+TGG + chr5.2:4240499-4240518 MS.gene22566:CDS 45.0%
TGCTGTTGTGATTGCTGTCT+TGG - chr5.2:4240404-4240423 None:intergenic 45.0%
TTTCCATTGGCAGTTTGTGG+AGG + chr5.2:4241417-4241436 MS.gene22566:CDS 45.0%
TTTGCCTTCAAGCTTCGTCT+TGG + chr5.2:4241528-4241547 MS.gene22566:CDS 45.0%
! ACTGGCTTCTCTGTCTTGAA+TGG + chr5.2:4240490-4240509 MS.gene22566:CDS 45.0%
! TCATTTTCACGAGCCTCAGT+TGG - chr5.2:4241717-4241736 None:intergenic 45.0%
! TTTGTGGAGGCATAGTTCGA+GGG + chr5.2:4241430-4241449 MS.gene22566:CDS 45.0%
!! AAGGTATTGGCGTGGAAAGA+AGG + chr5.2:4240958-4240977 MS.gene22566:CDS 45.0%
!! AGAATCGAAAGGTATTGGCG+TGG + chr5.2:4240950-4240969 MS.gene22566:CDS 45.0%
!!! ACAGCATTTTTGGGTCGACT+AGG + chr5.2:4240418-4240437 MS.gene22566:CDS 45.0%
AAGGCCAAGACGAAGCTTGA+AGG - chr5.2:4241535-4241554 None:intergenic 50.0%
ATGCCTCCACAAACTGCCAA+TGG - chr5.2:4241423-4241442 None:intergenic 50.0%
CCATGAGCCTGTCCACAAAT+AGG - chr5.2:4240535-4240554 None:intergenic 50.0%
CCTATTTGTGGACAGGCTCA+TGG + chr5.2:4240532-4240551 MS.gene22566:CDS 50.0%
GCAAACGCCAAGCAAGCATT+GGG + chr5.2:4241105-4241124 MS.gene22566:CDS 50.0%
GGCAACTCTTCAGCCATGAT+AGG + chr5.2:4241334-4241353 MS.gene22566:CDS 50.0%
GGTACTTCTGCGTCATCACA+GGG - chr5.2:4241696-4241715 None:intergenic 50.0%
GTGGAAAGAAGGAGGATGGT+GGG + chr5.2:4240969-4240988 MS.gene22566:CDS 50.0%
TGGTACTTCTGCGTCATCAC+AGG - chr5.2:4241697-4241716 None:intergenic 50.0%
! AATGGTGGAGGAGGTGACAT+TGG - chr5.2:4240271-4240290 None:intergenic 50.0%
! GGTGCCATGGAACCTATTTG+TGG + chr5.2:4240520-4240539 MS.gene22566:CDS 50.0%
! GTATTGGCGTGGAAAGAAGG+AGG + chr5.2:4240961-4240980 MS.gene22566:CDS 50.0%
! GTTTGTGGAGGCATAGTTCG+AGG + chr5.2:4241429-4241448 MS.gene22566:CDS 50.0%
! TGGGTTTGTAATGGTGGAGG+AGG - chr5.2:4240280-4240299 None:intergenic 50.0%
!! AAGCTTCGTCTTGGCCTTGT+TGG + chr5.2:4241537-4241556 MS.gene22566:CDS 50.0%
!! GGCCTTGTTGGACTCTTCTT+TGG + chr5.2:4241549-4241568 MS.gene22566:CDS 50.0%
!! GGTTTTATCGCAGGTTGCAC+CGG + chr5.2:4241276-4241295 MS.gene22566:CDS 50.0%
!! TGACGCAGAAGTACCAACTG+AGG + chr5.2:4241701-4241720 MS.gene22566:CDS 50.0%
!!! TATTTTCTGGCTCTGCCCCT+TGG + chr5.2:4241498-4241517 MS.gene22566:CDS 50.0%
ACCCGTGTCTCAAACGAGCT+TGG + chr5.2:4241201-4241220 MS.gene22566:CDS 55.0%
ATGCTTGCTTGGCGTTTGCG+AGG - chr5.2:4241104-4241123 None:intergenic 55.0%
CGCAAACGCCAAGCAAGCAT+TGG + chr5.2:4241104-4241123 MS.gene22566:CDS 55.0%
CGTGGAAAGAAGGAGGATGG+TGG + chr5.2:4240968-4240987 MS.gene22566:CDS 55.0%
CTAGGTGAGCTCAGCTTAGC+CGG + chr5.2:4240436-4240455 MS.gene22566:CDS 55.0%
GACACGGGTGGAAACACAAG+TGG - chr5.2:4241190-4241209 None:intergenic 55.0%
GAGGGGTTTCCATGGCTGTT+TGG + chr5.2:4240875-4240894 MS.gene22566:CDS 55.0%
GGAAACCCCTCTTAGACCCA+TGG - chr5.2:4240866-4240885 None:intergenic 55.0%
GGGTCTAAGAGGGGTTTCCA+TGG + chr5.2:4240867-4240886 MS.gene22566:CDS 55.0%
GGTGGCTGCAAGGGGAATTT+GGG + chr5.2:4241311-4241330 MS.gene22566:CDS 55.0%
GTGGAGGAGGTGACATTGGT+TGG - chr5.2:4240267-4240286 None:intergenic 55.0%
GTGGCTGCAAGGGGAATTTG+GGG + chr5.2:4241312-4241331 MS.gene22566:CDS 55.0%
TCTGAAAGCAGCGTCTTCGC+TGG - chr5.2:4240319-4240338 None:intergenic 55.0%
TGGCGTGGAAAGAAGGAGGA+TGG + chr5.2:4240965-4240984 MS.gene22566:CDS 55.0%
TGGCTGCAAGGGGAATTTGG+GGG + chr5.2:4241313-4241332 MS.gene22566:CDS 55.0%
TGGTGGCTGCAAGGGGAATT+TGG + chr5.2:4241310-4241329 MS.gene22566:CDS 55.0%
! AAGCTCGTTTGAGACACGGG+TGG - chr5.2:4241202-4241221 None:intergenic 55.0%
! AGCGAAGACGCTGCTTTCAG+AGG + chr5.2:4240318-4240337 MS.gene22566:CDS 55.0%
! CGCCAAGCTCGTTTGAGACA+CGG - chr5.2:4241206-4241225 None:intergenic 55.0%
! GAATGGTCTCTGTGGTGCCA+TGG + chr5.2:4240507-4240526 MS.gene22566:CDS 55.0%
! GCCAAGCTCGTTTGAGACAC+GGG - chr5.2:4241205-4241224 None:intergenic 55.0%
! GCGCGTGTGTCTCTAGGAAT+AGG + chr5.2:4241255-4241274 MS.gene22566:CDS 55.0%
!! CTTGGTGATGGTGGCTGCAA+GGG + chr5.2:4241302-4241321 MS.gene22566:CDS 55.0%
!! TTGGTGATGGTGGCTGCAAG+GGG + chr5.2:4241303-4241322 MS.gene22566:CDS 55.0%
AGCCACCATCACCAAGCTGC+CGG - chr5.2:4241298-4241317 None:intergenic 60.0%
AGGGACAGCTCGACCTTGGT+TGG + chr5.2:4241449-4241468 MS.gene22566:CDS 60.0%
CTTGCTTGGCGTTTGCGAGG+TGG - chr5.2:4241101-4241120 None:intergenic 60.0%
GGGACAGCTCGACCTTGGTT+GGG + chr5.2:4241450-4241469 MS.gene22566:CDS 60.0%
GTGGGTGGAAGAAGCTGCCA+AGG + chr5.2:4241632-4241651 MS.gene22566:CDS 60.0%
TTCGAGGGACAGCTCGACCT+TGG + chr5.2:4241445-4241464 MS.gene22566:CDS 60.0%
! CTAGAGACACACGCGCTGAC+CGG - chr5.2:4241251-4241270 None:intergenic 60.0%
! TTGCACCGGCAGCTTGGTGA+TGG + chr5.2:4241290-4241309 MS.gene22566:CDS 60.0%
!! GCTTGGTGATGGTGGCTGCA+AGG + chr5.2:4241301-4241320 MS.gene22566:CDS 60.0%
ACCAAGCCGACCGAGCGTAC+CGG + chr5.2:4241229-4241248 MS.gene22566:CDS 65.0%
CGGTCAGCGCGTGTGTCTCT+AGG + chr5.2:4241249-4241268 MS.gene22566:CDS 65.0%
GGTGAGCTCAGCTTAGCCGG+TGG + chr5.2:4240439-4240458 MS.gene22566:CDS 65.0%
!! CACCGGCAGCTTGGTGATGG+TGG + chr5.2:4241293-4241312 MS.gene22566:CDS 65.0%
ACCGGTACGCTCGGTCGGCT+TGG - chr5.2:4241233-4241252 None:intergenic 70.0%
AGCTTAGCCGGTGGCGCGCT+CGG + chr5.2:4240448-4240467 MS.gene22566:CDS 70.0%
AGTGAACCCGAGCGCGCCAC+CGG - chr5.2:4240458-4240477 None:intergenic 70.0%
CGCTGACCGGTACGCTCGGT+CGG - chr5.2:4241238-4241257 None:intergenic 70.0%
! CACGCGCTGACCGGTACGCT+CGG - chr5.2:4241242-4241261 None:intergenic 70.0%
! CGCAGGTTGCACCGGCAGCT+TGG + chr5.2:4241284-4241303 MS.gene22566:CDS 70.0%
GCTTAGCCGGTGGCGCGCTC+GGG + chr5.2:4240449-4240468 MS.gene22566:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 4240211 4241746 4240211 ID=MS.gene22566
chr5.2 mRNA 4240211 4241746 4240211 ID=MS.gene22566.t1;Parent=MS.gene22566
chr5.2 exon 4240211 4241746 4240211 ID=MS.gene22566.t1.exon1;Parent=MS.gene22566.t1
chr5.2 CDS 4240211 4241746 4240211 ID=cds.MS.gene22566.t1;Parent=MS.gene22566.t1
Gene Sequence

>MS.gene22566

ATGTCATCAACATGCAAATTAGGAGAAAACCTTAGCTCAAACCATAAAACTAACCAACCAATGTCACCTCCTCCACCATTACAAACCCAAAAATGTGACGCAAATCCAGCGAAGACGCTGCTTTCAGAGGAGCTAAGAATTCAAGGAAGATTAGCTTTTCCAATGATGTTGATGAATTTAGCTTGGTTTGCCAAGACAGCAATCACAACAGCATTTTTGGGTCGACTAGGTGAGCTCAGCTTAGCCGGTGGCGCGCTCGGGTTCACTTTCGCTAACGTTACTGGCTTCTCTGTCTTGAATGGTCTCTGTGGTGCCATGGAACCTATTTGTGGACAGGCTCATGGAGCTAAAAACGTGAGACTCCTTCACAAGACACTTCTCATGACAATTGTACTGTTGCTATTGGTAACAATTCCTATTACTTTCATGTGGCTTCATATTGACAAAATTTTGATTCATTTTGGCCAACAACAAGAAATTTCCACTGTTGCTGGTACTTATGTTTACTATCTCATACCTGATTTGTTTGTTATGTCACTCTTGTGTCCCTTAAAAGCTTACTTGAGCTCTCAAAGCATCACTCTTCCTACCATGTTTAGTTCTGGTGTAGCACTTGCTTTTCATGTTCCTGTTAACATACTACTCTCAAAAACCATGGGTCTAAGAGGGGTTTCCATGGCTGTTTGGATAACTGATCTTATTGTTGTTGTTCTTCTGGCCATTTATGTTTTAATTCTAGAGAATCGAAAGGTATTGGCGTGGAAAGAAGGAGGATGGTGGGATCAGAGTATTATGGATTGGATTAGGCTAATCAAGCTATCTGGATCTTGTTGTCTCAACACATGTATGGAGTGGTGGTGCTATGAAATTCTAGTCTTGCTTACTGGCCACCTCGCAAACGCCAAGCAAGCATTGGGAGTTTTAGCCATTGTGTTGAACTTTGACTATTTACTTTTCTCAGTGATGCTGTCATTGGCCACTTGTGTTTCCACCCGTGTCTCAAACGAGCTTGGCGCAAACCAAGCCGACCGAGCGTACCGGTCAGCGCGTGTGTCTCTAGGAATAGGTTTTATCGCAGGTTGCACCGGCAGCTTGGTGATGGTGGCTGCAAGGGGAATTTGGGGGCAACTCTTCAGCCATGATAGGGGCACTATAAATGGAGTAAAAAAGACAATGTTGTTGATGGCTCTAGTGGAGTTGTTTAATTTTCCATTGGCAGTTTGTGGAGGCATAGTTCGAGGGACAGCTCGACCTTGGTTGGGTATGTATGCAAATCTAGGCGGGTTTTATTTTCTGGCTCTGCCCCTTGGTGTTGTTTTTGCCTTCAAGCTTCGTCTTGGCCTTGTTGGACTCTTCTTTGGACTTCTTACTGGTATTGTTGTTTGCTTGTCATTATTATTAGTATTCATTGCTAGGATAAAGTGGGTGGAAGAAGCTGCCAAGGCACAAATATTAGCAAGTAACGACCAAGTTAAAGAAGTTCCCTGTGATGACGCAGAAGTACCAACTGAGGCTCGTGAAAATGACAAAGTGTAA
Protein sequence

>MS.gene22566.t1

MSSTCKLGENLSSNHKTNQPMSPPPPLQTQKCDANPAKTLLSEELRIQGRLAFPMMLMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNVRLLHKTLLMTIVLLLLVTIPITFMWLHIDKILIHFGQQQEISTVAGTYVYYLIPDLFVMSLLCPLKAYLSSQSITLPTMFSSGVALAFHVPVNILLSKTMGLRGVSMAVWITDLIVVVLLAIYVLILENRKVLAWKEGGWWDQSIMDWIRLIKLSGSCCLNTCMEWWCYEILVLLTGHLANAKQALGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQADRAYRSARVSLGIGFIAGCTGSLVMVAARGIWGQLFSHDRGTINGVKKTMLLMALVELFNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLRLGLVGLFFGLLTGIVVCLSLLLVFIARIKWVEEAAKAQILASNDQVKEVPCDDAEVPTEARENDKV