Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22970.t1 | XP_003625923.1 | 97.4 | 308 | 2 | 3 | 1 | 307 | 1 | 303 | 9.00E-159 | 569.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22970.t1 | Q8LEA8 | 46.4 | 338 | 145 | 7 | 1 | 308 | 5 | 336 | 1.1e-80 | 301.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22970.t1 | G7KRX0 | 97.4 | 308 | 2 | 3 | 1 | 307 | 1 | 303 | 6.5e-159 | 569.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052641 | MS.gene22970 | 0.841557 | 4.42E-58 | -1.69E-46 |
| MS.gene055505 | MS.gene22970 | 0.836753 | 7.78E-57 | -1.69E-46 |
| MS.gene057199 | MS.gene22970 | 0.820578 | 6.37E-53 | -1.69E-46 |
| MS.gene057668 | MS.gene22970 | 0.86421 | 1.43E-64 | -1.69E-46 |
| MS.gene059807 | MS.gene22970 | 0.818759 | 1.66E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22970.t1 | MTR_7g108820 | 96.117 | 309 | 6 | 3 | 1 | 308 | 1 | 304 | 0.0 | 611 |
| MS.gene22970.t1 | MTR_8g058520 | 96.117 | 309 | 6 | 3 | 1 | 308 | 1 | 304 | 0.0 | 611 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22970.t1 | AT4G02440 | 47.041 | 338 | 143 | 6 | 1 | 308 | 5 | 336 | 5.74e-105 | 311 |
Find 58 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGATAATGGTCATGTTTC+TGG | 0.130245 | 7.3:+6192697 | MS.gene22970:CDS |
| CAAATGAATGTTCTTCTTAT+TGG | 0.137353 | 7.3:+6192170 | MS.gene22970:CDS |
| AGGGCTTATGTTTGTGATAA+TGG | 0.254503 | 7.3:+6192685 | MS.gene22970:CDS |
| CACATTTAGCTACAGGAAAA+TGG | 0.257698 | 7.3:+6192362 | MS.gene22970:CDS |
| ACCTTTCTCTTCTTAGCTTC+TGG | 0.278200 | 7.3:-6192322 | None:intergenic |
| GTTGTTCTTGTCCCTGTTGA+AGG | 0.305088 | 7.3:-6192249 | None:intergenic |
| TGTTGGTGTTGTTGTTCATC+TGG | 0.306138 | 7.3:-6192085 | None:intergenic |
| GCTAAGAAGAGAAAGGTTAA+TGG | 0.338615 | 7.3:+6192328 | MS.gene22970:CDS |
| TAAATTGACTCATGTCAAAT+TGG | 0.359133 | 7.3:+6193476 | MS.gene22970:CDS |
| GTTTATGAAGAGAAAGATCT+TGG | 0.359162 | 7.3:-6192003 | None:intergenic |
| GTTGTTGATGATGATGTAAT+AGG | 0.379805 | 7.3:-6192109 | None:intergenic |
| TTTGTTCTTGTAATCATACT+TGG | 0.383121 | 7.3:+6192596 | MS.gene22970:CDS |
| TAATCGGAAGAAGATTGATT+TGG | 0.384060 | 7.3:+6192564 | MS.gene22970:CDS |
| ATGATGGTGAACCTGTTGTT+AGG | 0.390801 | 7.3:+6192665 | MS.gene22970:CDS |
| TGAAGCTCATCACCTTCAAC+AGG | 0.395859 | 7.3:+6192237 | MS.gene22970:CDS |
| ATGGTCATGTTTCTGGTGCT+TGG | 0.396836 | 7.3:+6192704 | MS.gene22970:CDS |
| TTGAAGAAGACCCTCGTGAT+TGG | 0.397252 | 7.3:+6191873 | MS.gene22970:CDS |
| GTCGGTGCAAACAGTTATAC+TGG | 0.405791 | 7.3:+6193417 | MS.gene22970:intron |
| TTGGCCAGGTTGTGTTCATT+TGG | 0.410463 | 7.3:+6192456 | MS.gene22970:CDS |
| CTAAGAAGAGAAAGGTTAAT+GGG | 0.420309 | 7.3:+6192329 | MS.gene22970:CDS |
| TGTTCTTCCAACAGAAATCA+TGG | 0.422948 | 7.3:-6191937 | None:intergenic |
| CTCTCATCCATGATTTCTGT+TGG | 0.424893 | 7.3:+6191930 | MS.gene22970:CDS |
| ATTGTTTATACGTTTGTGAT+TGG | 0.426128 | 7.3:+6192437 | MS.gene22970:CDS |
| ATTTCAAGAAGACACGTGTT+TGG | 0.435090 | 7.3:+6192521 | MS.gene22970:CDS |
| TTGAGTTCACATTTAGCTAC+AGG | 0.438504 | 7.3:+6192355 | MS.gene22970:CDS |
| GAAGAAAGAAGAAGTTCAGA+AGG | 0.446221 | 7.3:-6191977 | None:intergenic |
| TTGTTCTTGTAATCATACTT+GGG | 0.459848 | 7.3:+6192597 | MS.gene22970:CDS |
| AAACTACCCTTCTGTTGTCC+TGG | 0.461163 | 7.3:+6192022 | MS.gene22970:CDS |
| CTGTGAATGATATTAGTAAT+CGG | 0.469652 | 7.3:+6192548 | MS.gene22970:CDS |
| TGAAGAAGACCCTCGTGATT+GGG | 0.483756 | 7.3:+6191874 | MS.gene22970:CDS |
| GAAGAACATTCATTTGTTTG+AGG | 0.484296 | 7.3:-6192163 | None:intergenic |
| TTTCTCTTCTTAGCTTCTGG+TGG | 0.489673 | 7.3:-6192319 | None:intergenic |
| GAACATTCATTTGTTTGAGG+TGG | 0.490824 | 7.3:-6192160 | None:intergenic |
| GTTGGTGTTGTTGTTCATCT+GGG | 0.491428 | 7.3:-6192084 | None:intergenic |
| CAAACATAAGCCCTAACAAC+AGG | 0.496612 | 7.3:-6192676 | None:intergenic |
| ATGATGATGTAATAGGTTGT+TGG | 0.497159 | 7.3:-6192102 | None:intergenic |
| GTCAATTTAGCACAACCACT+TGG | 0.498310 | 7.3:-6193462 | None:intergenic |
| AACGAGGAAGAGATTAGAAC+TGG | 0.503126 | 7.3:+6192283 | MS.gene22970:CDS |
| TGTCCTGGTCCTCTTCATGC+TGG | 0.523403 | 7.3:+6192037 | MS.gene22970:CDS |
| TTTATGAAGAGAAAGATCTT+GGG | 0.527438 | 7.3:-6192002 | None:intergenic |
| GCAAACAGTTATACTGGAAG+AGG | 0.530712 | 7.3:+6193423 | MS.gene22970:intron |
| ACCAGAAGCTAAGAAGAGAA+AGG | 0.540167 | 7.3:+6192321 | MS.gene22970:CDS |
| GGATTTGGTTATCATGATGA+TGG | 0.549376 | 7.3:+6192649 | MS.gene22970:CDS |
| AGTTCTAATCTCTTCCTCGT+TGG | 0.559801 | 7.3:-6192281 | None:intergenic |
| AAGAGGACCAGGACAACAGA+AGG | 0.566286 | 7.3:-6192029 | None:intergenic |
| TGATGGTGAACCTGTTGTTA+GGG | 0.575949 | 7.3:+6192666 | MS.gene22970:CDS |
| GAAAGACGAGCCCAATCACG+AGG | 0.597495 | 7.3:-6191884 | None:intergenic |
| ATACCAGCATGAAGAGGACC+AGG | 0.606219 | 7.3:-6192040 | None:intergenic |
| AAGAGAATACCAGCATGAAG+AGG | 0.613643 | 7.3:-6192046 | None:intergenic |
| TCTTCCAAATGAACACAACC+TGG | 0.613786 | 7.3:-6192460 | None:intergenic |
| TGGACTCTTAGTAGAGAACA+AGG | 0.622079 | 7.3:+6192382 | MS.gene22970:CDS |
| TTATACGTTTGTGATTGGCC+AGG | 0.624893 | 7.3:+6192442 | MS.gene22970:CDS |
| TGAGGTGGAAGAGATGATGA+AGG | 0.629257 | 7.3:-6192145 | None:intergenic |
| TTGTTCATCTGGGAAATCAG+CGG | 0.640290 | 7.3:-6192074 | None:intergenic |
| AGAGGACCAGGACAACAGAA+GGG | 0.650940 | 7.3:-6192028 | None:intergenic |
| GAAGCTCATCACCTTCAACA+GGG | 0.703741 | 7.3:+6192238 | MS.gene22970:CDS |
| ACAACAAGAACAGACCAACG+AGG | 0.731842 | 7.3:+6192267 | MS.gene22970:CDS |
| AAAGACGAGCCCAATCACGA+GGG | 0.734594 | 7.3:-6191883 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAATAAAAATAATCA+AGG | - | chr7.3:6193006-6193025 | None:intergenic | 10.0% |
| !!! | ATATAATTCTGAAGATTTTA+TGG | + | chr7.3:6191846-6191865 | MS.gene22970:CDS | 15.0% |
| !! | ATTATTTATTCCTGCAATAT+GGG | + | chr7.3:6192824-6192843 | MS.gene22970:intron | 20.0% |
| !! | TCATAACTTTAAGTCATTAT+AGG | - | chr7.3:6193257-6193276 | None:intergenic | 20.0% |
| ! | ATTGTTTATACGTTTGTGAT+TGG | + | chr7.3:6192437-6192456 | MS.gene22970:CDS | 25.0% |
| ! | CAAATGAATGTTCTTCTTAT+TGG | + | chr7.3:6192170-6192189 | MS.gene22970:CDS | 25.0% |
| ! | CATTATTTATTCCTGCAATA+TGG | + | chr7.3:6192823-6192842 | MS.gene22970:intron | 25.0% |
| ! | CTGTGAATGATATTAGTAAT+CGG | + | chr7.3:6192548-6192567 | MS.gene22970:CDS | 25.0% |
| ! | TTGTTCTTGTAATCATACTT+GGG | + | chr7.3:6192597-6192616 | MS.gene22970:CDS | 25.0% |
| ! | TTTATGAAGAGAAAGATCTT+GGG | - | chr7.3:6192005-6192024 | None:intergenic | 25.0% |
| ! | TTTGTTCTTGTAATCATACT+TGG | + | chr7.3:6192596-6192615 | MS.gene22970:CDS | 25.0% |
| !! | TAAATTGACTCATGTCAAAT+TGG | + | chr7.3:6193476-6193495 | MS.gene22970:CDS | 25.0% |
| !! | TGACTAATGTTGTTATTCTT+GGG | + | chr7.3:6193076-6193095 | MS.gene22970:intron | 25.0% |
| !!! | AATTCTGAAGATTTTATGGA+AGG | + | chr7.3:6191850-6191869 | MS.gene22970:CDS | 25.0% |
| AAGAATGATCAAACGTACAT+AGG | - | chr7.3:6192739-6192758 | None:intergenic | 30.0% | |
| CAAGACATTAAGTTAAGATG+TGG | - | chr7.3:6193162-6193181 | None:intergenic | 30.0% | |
| CATTGGAGAGTAGTATTTAT+TGG | + | chr7.3:6192858-6192877 | MS.gene22970:intron | 30.0% | |
| CTAAGAAGAGAAAGGTTAAT+GGG | + | chr7.3:6192329-6192348 | MS.gene22970:CDS | 30.0% | |
| GAAGAACATTCATTTGTTTG+AGG | - | chr7.3:6192166-6192185 | None:intergenic | 30.0% | |
| GTTTATGAAGAGAAAGATCT+TGG | - | chr7.3:6192006-6192025 | None:intergenic | 30.0% | |
| TAAGTCATTATAGGAGCTAA+GGG | - | chr7.3:6193248-6193267 | None:intergenic | 30.0% | |
| TAATCGGAAGAAGATTGATT+TGG | + | chr7.3:6192564-6192583 | MS.gene22970:CDS | 30.0% | |
| TATGGGAAGAAATATCTCAT+TGG | + | chr7.3:6192841-6192860 | MS.gene22970:intron | 30.0% | |
| TGACTTAAAGTTATGAAGCA+CGG | + | chr7.3:6193261-6193280 | MS.gene22970:intron | 30.0% | |
| TTAAGTCATTATAGGAGCTA+AGG | - | chr7.3:6193249-6193268 | None:intergenic | 30.0% | |
| TTCAATGTAATCACAAGTGT+CGG | + | chr7.3:6193339-6193358 | MS.gene22970:intron | 30.0% | |
| ! | ATGATGATGTAATAGGTTGT+TGG | - | chr7.3:6192105-6192124 | None:intergenic | 30.0% |
| ! | GTGACTAATGTTGTTATTCT+TGG | + | chr7.3:6193075-6193094 | MS.gene22970:intron | 30.0% |
| !! | GTTGTTGATGATGATGTAAT+AGG | - | chr7.3:6192112-6192131 | None:intergenic | 30.0% |
| !!! | AGAAAGTATAGACTTTTTCG+AGG | + | chr7.3:6192487-6192506 | MS.gene22970:CDS | 30.0% |
| AGGGCTTATGTTTGTGATAA+TGG | + | chr7.3:6192685-6192704 | MS.gene22970:CDS | 35.0% | |
| ATTTCAAGAAGACACGTGTT+TGG | + | chr7.3:6192521-6192540 | MS.gene22970:CDS | 35.0% | |
| CACATTTAGCTACAGGAAAA+TGG | + | chr7.3:6192362-6192381 | MS.gene22970:CDS | 35.0% | |
| GAACATTCATTTGTTTGAGG+TGG | - | chr7.3:6192163-6192182 | None:intergenic | 35.0% | |
| GAAGAAAGAAGAAGTTCAGA+AGG | - | chr7.3:6191980-6191999 | None:intergenic | 35.0% | |
| GATATTTCTTCCCATATTGC+AGG | - | chr7.3:6192837-6192856 | None:intergenic | 35.0% | |
| GCTAAGAAGAGAAAGGTTAA+TGG | + | chr7.3:6192328-6192347 | MS.gene22970:CDS | 35.0% | |
| TGTTCTTCCAACAGAAATCA+TGG | - | chr7.3:6191940-6191959 | None:intergenic | 35.0% | |
| TTGAGTTCACATTTAGCTAC+AGG | + | chr7.3:6192355-6192374 | MS.gene22970:CDS | 35.0% | |
| ! | ACGCCTTTAATCAAAAGTGT+CGG | + | chr7.3:6193399-6193418 | MS.gene22970:intron | 35.0% |
| ! | GATGAGAGAATTGAGTTTTG+TGG | - | chr7.3:6191918-6191937 | None:intergenic | 35.0% |
| ! | GGATTTGGTTATCATGATGA+TGG | + | chr7.3:6192649-6192668 | MS.gene22970:CDS | 35.0% |
| ! | TTGTTATTCTTGGGTCATAG+TGG | + | chr7.3:6193085-6193104 | MS.gene22970:intron | 35.0% |
| !! | GTCTTGTTTGTATAGAGATG+TGG | + | chr7.3:6193176-6193195 | MS.gene22970:intron | 35.0% |
| !! | TGTGATAATGGTCATGTTTC+TGG | + | chr7.3:6192697-6192716 | MS.gene22970:CDS | 35.0% |
| !! | TGTTTTAAGCGTTTTCCAAG+TGG | + | chr7.3:6193447-6193466 | MS.gene22970:CDS | 35.0% |
| !! | TTTTGTTTGAGGAGAGGATT+TGG | + | chr7.3:6192634-6192653 | MS.gene22970:CDS | 35.0% |
| !!! | TTCACTCTGCTTTTTGTTTG+AGG | + | chr7.3:6192623-6192642 | MS.gene22970:CDS | 35.0% |
| AACGAGGAAGAGATTAGAAC+TGG | + | chr7.3:6192283-6192302 | MS.gene22970:CDS | 40.0% | |
| AAGAGAATACCAGCATGAAG+AGG | - | chr7.3:6192049-6192068 | None:intergenic | 40.0% | |
| ACCAGAAGCTAAGAAGAGAA+AGG | + | chr7.3:6192321-6192340 | MS.gene22970:CDS | 40.0% | |
| ACCTTTCTCTTCTTAGCTTC+TGG | - | chr7.3:6192325-6192344 | None:intergenic | 40.0% | |
| CAAACATAAGCCCTAACAAC+AGG | - | chr7.3:6192679-6192698 | None:intergenic | 40.0% | |
| CTAAGGGAATCATCCACAAT+AGG | - | chr7.3:6193232-6193251 | None:intergenic | 40.0% | |
| CTCTCATCCATGATTTCTGT+TGG | + | chr7.3:6191930-6191949 | MS.gene22970:CDS | 40.0% | |
| GCAAACAGTTATACTGGAAG+AGG | + | chr7.3:6193423-6193442 | MS.gene22970:intron | 40.0% | |
| GTCAATTTAGCACAACCACT+TGG | - | chr7.3:6193465-6193484 | None:intergenic | 40.0% | |
| TCTTCCAAATGAACACAACC+TGG | - | chr7.3:6192463-6192482 | None:intergenic | 40.0% | |
| TGGACTCTTAGTAGAGAACA+AGG | + | chr7.3:6192382-6192401 | MS.gene22970:CDS | 40.0% | |
| TTGTTACTGGTCACGCAAAA+TGG | - | chr7.3:6192967-6192986 | None:intergenic | 40.0% | |
| TTGTTCATCTGGGAAATCAG+CGG | - | chr7.3:6192077-6192096 | None:intergenic | 40.0% | |
| TTTACTTTCGTGATTGCCCA+AGG | - | chr7.3:6193132-6193151 | None:intergenic | 40.0% | |
| TTTCTCTTCTTAGCTTCTGG+TGG | - | chr7.3:6192322-6192341 | None:intergenic | 40.0% | |
| ! | ACAATGCCATGTGTTGTTAC+TGG | - | chr7.3:6192980-6192999 | None:intergenic | 40.0% |
| ! | AGTTCTAATCTCTTCCTCGT+TGG | - | chr7.3:6192284-6192303 | None:intergenic | 40.0% |
| ! | ATGATGGTGAACCTGTTGTT+AGG | + | chr7.3:6192665-6192684 | MS.gene22970:CDS | 40.0% |
| ! | CAAAGTGTTAGTGTTGTGTC+CGG | - | chr7.3:6193290-6193309 | None:intergenic | 40.0% |
| ! | TGATGGTGAACCTGTTGTTA+GGG | + | chr7.3:6192666-6192685 | MS.gene22970:CDS | 40.0% |
| ! | TTATACGTTTGTGATTGGCC+AGG | + | chr7.3:6192442-6192461 | MS.gene22970:CDS | 40.0% |
| !! | CTTTTGATTAAAGGCGTGTC+CGG | - | chr7.3:6193396-6193415 | None:intergenic | 40.0% |
| !! | GCACCGACACTTTTGATTAA+AGG | - | chr7.3:6193405-6193424 | None:intergenic | 40.0% |
| !! | GTTGGTGTTGTTGTTCATCT+GGG | - | chr7.3:6192087-6192106 | None:intergenic | 40.0% |
| !! | TGTTGGTGTTGTTGTTCATC+TGG | - | chr7.3:6192088-6192107 | None:intergenic | 40.0% |
| !!! | TCTGCTTTTTGTTTGAGGAG+AGG | + | chr7.3:6192628-6192647 | MS.gene22970:CDS | 40.0% |
| AAACTACCCTTCTGTTGTCC+TGG | + | chr7.3:6192022-6192041 | MS.gene22970:CDS | 45.0% | |
| AAGTTATGAAGCACGGACAC+CGG | + | chr7.3:6193268-6193287 | MS.gene22970:intron | 45.0% | |
| AAGTTGCTCTTGGCCTATTG+TGG | + | chr7.3:6193216-6193235 | MS.gene22970:intron | 45.0% | |
| ACAACAAGAACAGACCAACG+AGG | + | chr7.3:6192267-6192286 | MS.gene22970:CDS | 45.0% | |
| CTCACTTGTGAAGTTGCTCT+TGG | + | chr7.3:6193206-6193225 | MS.gene22970:intron | 45.0% | |
| GAAGCTCATCACCTTCAACA+GGG | + | chr7.3:6192238-6192257 | MS.gene22970:CDS | 45.0% | |
| GGTTTGCGAATCATTGCGTT+GGG | + | chr7.3:6193106-6193125 | MS.gene22970:intron | 45.0% | |
| GTCGGTGCAAACAGTTATAC+TGG | + | chr7.3:6193417-6193436 | MS.gene22970:intron | 45.0% | |
| GTTGTTCTTGTCCCTGTTGA+AGG | - | chr7.3:6192252-6192271 | None:intergenic | 45.0% | |
| TGAAGAAGACCCTCGTGATT+GGG | + | chr7.3:6191874-6191893 | MS.gene22970:CDS | 45.0% | |
| TGAAGCTCATCACCTTCAAC+AGG | + | chr7.3:6192237-6192256 | MS.gene22970:CDS | 45.0% | |
| TGAGGTGGAAGAGATGATGA+AGG | - | chr7.3:6192148-6192167 | None:intergenic | 45.0% | |
| TTGAAGAAGACCCTCGTGAT+TGG | + | chr7.3:6191873-6191892 | MS.gene22970:CDS | 45.0% | |
| TTGGCCAGGTTGTGTTCATT+TGG | + | chr7.3:6192456-6192475 | MS.gene22970:CDS | 45.0% | |
| ! | TGGTTTGCGAATCATTGCGT+TGG | + | chr7.3:6193105-6193124 | MS.gene22970:intron | 45.0% |
| !! | ATGGTCATGTTTCTGGTGCT+TGG | + | chr7.3:6192704-6192723 | MS.gene22970:CDS | 45.0% |
| AAAGACGAGCCCAATCACGA+GGG | - | chr7.3:6191886-6191905 | None:intergenic | 50.0% | |
| AAGAGGACCAGGACAACAGA+AGG | - | chr7.3:6192032-6192051 | None:intergenic | 50.0% | |
| AGAGGACCAGGACAACAGAA+GGG | - | chr7.3:6192031-6192050 | None:intergenic | 50.0% | |
| ATACCAGCATGAAGAGGACC+AGG | - | chr7.3:6192043-6192062 | None:intergenic | 50.0% | |
| GAATCATTGCGTTGGGCCTT+GGG | + | chr7.3:6193113-6193132 | MS.gene22970:intron | 50.0% | |
| GCGTGACCAGTAACAACACA+TGG | + | chr7.3:6192971-6192990 | MS.gene22970:intron | 50.0% | |
| CGAATCATTGCGTTGGGCCT+TGG | + | chr7.3:6193112-6193131 | MS.gene22970:intron | 55.0% | |
| GAAAGACGAGCCCAATCACG+AGG | - | chr7.3:6191887-6191906 | None:intergenic | 55.0% | |
| GACACCGACACAACAGGTGT+CGG | + | chr7.3:6193367-6193386 | MS.gene22970:intron | 55.0% | |
| GTGTCCGACACCTGTTGTGT+CGG | - | chr7.3:6193374-6193393 | None:intergenic | 55.0% | |
| TGTCCTGGTCCTCTTCATGC+TGG | + | chr7.3:6192037-6192056 | MS.gene22970:CDS | 55.0% | |
| ! | GACACCTGTTGTGTCGGTGT+CGG | - | chr7.3:6193368-6193387 | None:intergenic | 55.0% |
| !! | ACACAACAGGTGTCGGACAC+CGG | + | chr7.3:6193374-6193393 | MS.gene22970:intron | 55.0% |
| GTGTCCGACACCGACACAAC+AGG | + | chr7.3:6193361-6193380 | MS.gene22970:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 6191824 | 6193521 | 6191824 | ID=MS.gene22970 |
| chr7.3 | mRNA | 6191824 | 6193521 | 6191824 | ID=MS.gene22970.t1;Parent=MS.gene22970 |
| chr7.3 | exon | 6191824 | 6192740 | 6191824 | ID=MS.gene22970.t1.exon1;Parent=MS.gene22970.t1 |
| chr7.3 | CDS | 6191824 | 6192740 | 6191824 | ID=cds.MS.gene22970.t1;Parent=MS.gene22970.t1 |
| chr7.3 | exon | 6193431 | 6193521 | 6193431 | ID=MS.gene22970.t1.exon2;Parent=MS.gene22970.t1 |
| chr7.3 | CDS | 6193431 | 6193521 | 6193431 | ID=cds.MS.gene22970.t1;Parent=MS.gene22970.t1 |
| Gene Sequence |
| Protein sequence |
