Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23102.t1 | RHN49106.1 | 96.7 | 307 | 10 | 0 | 42 | 348 | 108 | 414 | 6.20E-179 | 636.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23102.t1 | Q9SFF6 | 70.1 | 308 | 92 | 0 | 42 | 349 | 108 | 415 | 4.3e-136 | 485.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23102.t1 | A0A396H778 | 96.7 | 307 | 10 | 0 | 42 | 348 | 108 | 414 | 4.5e-179 | 636.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049865 | MS.gene23102 | 0.815245 | 1.02E-51 | -1.69E-46 |
| MS.gene050825 | MS.gene23102 | 0.924785 | 4.42E-90 | -1.69E-46 |
| MS.gene05087 | MS.gene23102 | 0.80512 | 1.56E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene23102 | 0.802532 | 5.36E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene23102 | 0.802445 | 5.59E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTTAGTTAAATTATTCTT+TGG | + | 50582:834-853 | MS.gene23102:intron | 15.0% |
| !! | AAAATCCTCTTAACAAAAAT+TGG | - | 50582:769-788 | None:intergenic | 20.0% |
| !! | ACAAGAATTTATGAATAATC+CGG | - | 50582:2477-2496 | None:intergenic | 20.0% |
| !! | TAGAGACTAAAAATTATTTG+TGG | + | 50582:2687-2706 | MS.gene23102:intron | 20.0% |
| !! | TGTATGTCAATGATAATAAT+AGG | - | 50582:797-816 | None:intergenic | 20.0% |
| !!! | AAATCTCTTTTCTAATGAAT+GGG | + | 50582:1164-1183 | MS.gene23102:intron | 20.0% |
| !!! | AATTATTCTTTGGAAATTTG+TGG | + | 50582:844-863 | MS.gene23102:intron | 20.0% |
| !!! | GTTATGTGTTATAATTTTTG+TGG | + | 50582:614-633 | MS.gene23102:intron | 20.0% |
| !!! | TGCTAATGATTTTTTTTTTC+AGG | + | 50582:1395-1414 | MS.gene23102:intron | 20.0% |
| !!! | TTTTTCCAATTTTTGTTAAG+AGG | + | 50582:761-780 | MS.gene23102:intron | 20.0% |
| ! | AAAAAAATCATTAGCATCCA+TGG | - | 50582:1391-1410 | None:intergenic | 25.0% |
| ! | AAAATTACGACATTCCAATA+TGG | - | 50582:1350-1369 | None:intergenic | 25.0% |
| ! | AATTGAAGAATTAATGTCGA+AGG | + | 50582:1299-1318 | MS.gene23102:CDS | 25.0% |
| ! | AATTTAGAGGACAGAAAATA+TGG | + | 50582:1268-1287 | MS.gene23102:CDS | 25.0% |
| ! | ACAATTATATCCAAGTTTAC+AGG | - | 50582:1591-1610 | None:intergenic | 25.0% |
| ! | ATCAAAAAACCAATTTCCAA+CGG | - | 50582:2859-2878 | None:intergenic | 25.0% |
| ! | ATTGAAGAATTAATGTCGAA+GGG | + | 50582:1300-1319 | MS.gene23102:CDS | 25.0% |
| ! | CTGAGAACAATAAAAAGAAA+GGG | - | 50582:2783-2802 | None:intergenic | 25.0% |
| ! | TCTGAGAACAATAAAAAGAA+AGG | - | 50582:2784-2803 | None:intergenic | 25.0% |
| !! | AAAAAACACCATTCATTTTG+TGG | + | 50582:871-890 | MS.gene23102:intron | 25.0% |
| !! | AATCTTTTCCTCTTCTATTT+CGG | + | 50582:2634-2653 | MS.gene23102:intron | 25.0% |
| !! | ATACAAGTTTTCTAACAGAA+AGG | - | 50582:1766-1785 | None:intergenic | 25.0% |
| !! | GAAATCTCTTTTCTAATGAA+TGG | + | 50582:1163-1182 | MS.gene23102:intron | 25.0% |
| !! | TGTTTGAAAACTTTTCTTCA+GGG | + | 50582:414-433 | MS.gene23102:intron | 25.0% |
| !!! | ATGTTCAAGTATTTTGATCA+TGG | + | 50582:304-323 | MS.gene23102:intron | 25.0% |
| !!! | TGTTCAAGTATTTTGATCAT+GGG | + | 50582:305-324 | MS.gene23102:intron | 25.0% |
| !!! | TTGTTTTTCCATGTATTTTG+AGG | - | 50582:500-519 | None:intergenic | 25.0% |
| !!! | TTTATTAGTCTTTGCTAGTA+TGG | + | 50582:1138-1157 | MS.gene23102:intron | 25.0% |
| AACAATAAAAAGAAAGGGAG+AGG | - | 50582:2778-2797 | None:intergenic | 30.0% | |
| AATAAAGCTGAAGAAAATCC+TGG | + | 50582:544-563 | MS.gene23102:CDS | 30.0% | |
| AATCAGAAAATTACCGAAGT+TGG | - | 50582:1870-1889 | None:intergenic | 30.0% | |
| ATCACTCAAACATTTCACTT+TGG | - | 50582:1502-1521 | None:intergenic | 30.0% | |
| ATCAGAAAATTACCGAAGTT+GGG | - | 50582:1869-1888 | None:intergenic | 30.0% | |
| ATGTAGAACTGATATATCTG+GGG | + | 50582:1625-1644 | MS.gene23102:intron | 30.0% | |
| CAAATGCTAAATGACATCAA+AGG | + | 50582:2431-2450 | MS.gene23102:CDS | 30.0% | |
| CATGTAGAACTGATATATCT+GGG | + | 50582:1624-1643 | MS.gene23102:intron | 30.0% | |
| GTATGAATTCACAAGTCAAT+TGG | - | 50582:1226-1245 | None:intergenic | 30.0% | |
| TATTCAATCATAGATGTCCA+TGG | + | 50582:1371-1390 | MS.gene23102:intron | 30.0% | |
| TCATGTAGAACTGATATATC+TGG | + | 50582:1623-1642 | MS.gene23102:intron | 30.0% | |
| ! | AAATAGTTGGCTCATTCAAT+TGG | + | 50582:277-296 | MS.gene23102:CDS | 30.0% |
| ! | ACATGATCGATCAAATTTTG+AGG | - | 50582:1976-1995 | None:intergenic | 30.0% |
| ! | CATTTCACTTTGGTAGATTT+TGG | - | 50582:1492-1511 | None:intergenic | 30.0% |
| ! | CTGAAGAAAAGTTTTCAAAC+AGG | - | 50582:415-434 | None:intergenic | 30.0% |
| ! | CTGTTTGAAAACTTTTCTTC+AGG | + | 50582:413-432 | MS.gene23102:intron | 30.0% |
| ! | GCAAATGTACATTTTTCTTG+TGG | + | 50582:1060-1079 | MS.gene23102:intron | 30.0% |
| !! | ACTGTACTATTTTAGAAGCA+CGG | - | 50582:2589-2608 | None:intergenic | 30.0% |
| !! | AGAGAGTGTCAAAATTACTT+TGG | - | 50582:2317-2336 | None:intergenic | 30.0% |
| !! | ATTGACGTCTTTGAAATTGT+AGG | + | 50582:1800-1819 | MS.gene23102:intron | 30.0% |
| !! | TAGATTTTGGAAACAAGCTT+TGG | - | 50582:1479-1498 | None:intergenic | 30.0% |
| !! | TGCTTCTAAAATAGTACAGT+TGG | + | 50582:2589-2608 | MS.gene23102:intron | 30.0% |
| !!! | TTTTTTCAGGCTCTTTTATC+TGG | + | 50582:1408-1427 | MS.gene23102:intron | 30.0% |
| AAAAAGTTGTCTTAACCACC+TGG | + | 50582:1842-1861 | MS.gene23102:CDS | 35.0% | |
| AGAGGTAAAACTATGGTTGT+TGG | + | 50582:936-955 | MS.gene23102:intron | 35.0% | |
| CAATTATTCCAAGATCCATG+AGG | - | 50582:2249-2268 | None:intergenic | 35.0% | |
| CCTCTTCTATTTCGGAAAAT+TGG | + | 50582:2642-2661 | MS.gene23102:intron | 35.0% | |
| GAAAAACAACTACCATTCAC+TGG | + | 50582:511-530 | MS.gene23102:CDS | 35.0% | |
| GAATCATGCCACAAAATGAA+TGG | - | 50582:882-901 | None:intergenic | 35.0% | |
| GAGTGTCAAAATTACTTTGG+AGG | - | 50582:2314-2333 | None:intergenic | 35.0% | |
| GCAGATTTCAGTACACATAT+GGG | - | 50582:592-611 | None:intergenic | 35.0% | |
| GGAAATACTGAGAGAGATAA+TGG | + | 50582:2663-2682 | MS.gene23102:intron | 35.0% | |
| GTTGGATTACTCTATTATCC+TGG | + | 50582:954-973 | MS.gene23102:intron | 35.0% | |
| GTTGGTTAAACTAGAAGCTA+TGG | - | 50582:2146-2165 | None:intergenic | 35.0% | |
| TATATACCACAAACACCAGT+TGG | - | 50582:2164-2183 | None:intergenic | 35.0% | |
| TCATGCATACCATGTTGTTA+AGG | - | 50582:2556-2575 | None:intergenic | 35.0% | |
| TCCAATATGGAAAACCTTGT+TGG | - | 50582:1337-1356 | None:intergenic | 35.0% | |
| TCTAAAGACACAACTTCTGA+TGG | - | 50582:457-476 | None:intergenic | 35.0% | |
| TGTAGAACTGATATATCTGG+GGG | + | 50582:1626-1645 | MS.gene23102:intron | 35.0% | |
| TTAGAAAAACTTACTCGACG+CGG | + | 50582:472-491 | MS.gene23102:CDS | 35.0% | |
| TTGCTCAATAATCCAGTGAA+TGG | - | 50582:526-545 | None:intergenic | 35.0% | |
| ! | ACTTTGGAGGATCTGAATTT+GGG | - | 50582:2301-2320 | None:intergenic | 35.0% |
| ! | AGGTGGTTAAGACAACTTTT+TGG | - | 50582:1843-1862 | None:intergenic | 35.0% |
| ! | ATGTACATTTTTCTTGTGGC+AGG | + | 50582:1064-1083 | MS.gene23102:intron | 35.0% |
| ! | CAAACATGATTTGTATGACC+AGG | - | 50582:975-994 | None:intergenic | 35.0% |
| ! | CCAATTTTCCGAAATAGAAG+AGG | - | 50582:2645-2664 | None:intergenic | 35.0% |
| ! | TACTTTGGAGGATCTGAATT+TGG | - | 50582:2302-2321 | None:intergenic | 35.0% |
| ! | TTGAAAACTTTTCTTCAGGG+AGG | + | 50582:417-436 | MS.gene23102:intron | 35.0% |
| ! | TTTTCAACGACTTCTCAATC+CGG | + | 50582:2455-2474 | MS.gene23102:CDS | 35.0% |
| !! | ATTAGTCTTTGCTAGTATGG+AGG | + | 50582:1141-1160 | MS.gene23102:intron | 35.0% |
| !! | TAGCTTCTAGTTTAACCAAC+TGG | + | 50582:2146-2165 | MS.gene23102:intron | 35.0% |
| !! | TTGTTTTGCTCATTGCCAAT+CGG | + | 50582:2493-2512 | MS.gene23102:CDS | 35.0% |
| !!! | AGTATTTTGATCATGGGTCT+CGG | + | 50582:311-330 | MS.gene23102:intron | 35.0% |
| !!! | TGCGCACAGATTTTTTTAAC+TGG | + | 50582:648-667 | MS.gene23102:intron | 35.0% |
| AAGTTTACAGGCAATGATGC+AGG | - | 50582:1579-1598 | None:intergenic | 40.0% | |
| AATCGGAGAGACAAGATACA+TGG | + | 50582:2510-2529 | MS.gene23102:CDS | 40.0% | |
| ACATTGAGGAATCTCTTTGG+AGG | + | 50582:1653-1672 | MS.gene23102:CDS | 40.0% | |
| AGGGTAAAAGGGAAAAAACC+AGG | - | 50582:565-584 | None:intergenic | 40.0% | |
| ATATGGGTGGAAGGGTAAAA+GGG | - | 50582:576-595 | None:intergenic | 40.0% | |
| ATGTATCTTGTCTCTCCGAT+TGG | - | 50582:2511-2530 | None:intergenic | 40.0% | |
| ATGTTTGGATGGAACTTACC+TGG | + | 50582:221-240 | MS.gene23102:CDS | 40.0% | |
| CACACATTGAGGAATCTCTT+TGG | + | 50582:1650-1669 | MS.gene23102:CDS | 40.0% | |
| CATACCATGTTGTTAAGGAG+GGG | - | 50582:2551-2570 | None:intergenic | 40.0% | |
| CGCAGATTTCAGTACACATA+TGG | - | 50582:593-612 | None:intergenic | 40.0% | |
| GAGAGCTTTCATCATAGCAA+AGG | - | 50582:2718-2737 | None:intergenic | 40.0% | |
| GATTTCAGTACACATATGGG+TGG | - | 50582:589-608 | None:intergenic | 40.0% | |
| GCAATGAAATCTTCTGTCAG+TGG | + | 50582:1735-1754 | MS.gene23102:intron | 40.0% | |
| GCATACCATGTTGTTAAGGA+GGG | - | 50582:2552-2571 | None:intergenic | 40.0% | |
| GTAGAACTGATATATCTGGG+GGG | + | 50582:1627-1646 | MS.gene23102:intron | 40.0% | |
| GTGAAATGTTTGAGTGATGC+TGG | + | 50582:1504-1523 | MS.gene23102:CDS | 40.0% | |
| GTTTAACCAACTGGTGTTTG+TGG | + | 50582:2155-2174 | MS.gene23102:intron | 40.0% | |
| TGAATGCAGCTTATGATGCA+TGG | + | 50582:2016-2035 | MS.gene23102:CDS | 40.0% | |
| TGACAATACCTGCCATAATC+TGG | + | 50582:2917-2936 | MS.gene23102:CDS | 40.0% | |
| TGCATACCATGTTGTTAAGG+AGG | - | 50582:2553-2572 | None:intergenic | 40.0% | |
| TGCATCATTGCCTGTAAACT+TGG | + | 50582:1578-1597 | MS.gene23102:intron | 40.0% | |
| TGTGAATTCATACCCCTTTC+AGG | + | 50582:1233-1252 | MS.gene23102:intron | 40.0% | |
| ! | AAAACTTTTCTTCAGGGAGG+AGG | + | 50582:420-439 | MS.gene23102:intron | 40.0% |
| ! | ATTATGGCAGGTATTGTCAC+AGG | - | 50582:2916-2935 | None:intergenic | 40.0% |
| ! | GCCAACAAGGTTTTCCATAT+TGG | + | 50582:1333-1352 | MS.gene23102:intron | 40.0% |
| ! | TAGTTGGCTCATTCAATTGG+AGG | + | 50582:280-299 | MS.gene23102:CDS | 40.0% |
| ! | TCTTTTATCTGGATGCTCTG+CGG | + | 50582:1419-1438 | MS.gene23102:CDS | 40.0% |
| ! | TGAATGGGCTCTTCTTAAGA+AGG | + | 50582:1179-1198 | MS.gene23102:intron | 40.0% |
| ! | TTATGGCAGGTATTGTCACA+GGG | - | 50582:2915-2934 | None:intergenic | 40.0% |
| ! | TTTGTTTCCTCGAAGTGCTA+TGG | + | 50582:2112-2131 | MS.gene23102:intron | 40.0% |
| ! | TTTTTCTTGTGGCAGGAAGA+AGG | + | 50582:1071-1090 | MS.gene23102:intron | 40.0% |
| !! | TCAAAGTGAGGTACTGTGAT+GGG | + | 50582:678-697 | MS.gene23102:CDS | 40.0% |
| AAATTACCGAAGTTGGGTCC+AGG | - | 50582:1863-1882 | None:intergenic | 45.0% | |
| ACGAGGTCAGTGAGATAGTA+TGG | + | 50582:726-745 | MS.gene23102:intron | 45.0% | |
| ACGCGGTTCCTCAAAATACA+TGG | + | 50582:489-508 | MS.gene23102:CDS | 45.0% | |
| ACTGGAACAGAGTCAAAGTG+AGG | + | 50582:666-685 | MS.gene23102:CDS | 45.0% | |
| ATCCATACCATAGCACTTCG+AGG | - | 50582:2122-2141 | None:intergenic | 45.0% | |
| ATTTGCACCAGATCCAGATC+CGG | - | 50582:261-280 | None:intergenic | 45.0% | |
| CAGTACACATATGGGTGGAA+GGG | - | 50582:584-603 | None:intergenic | 45.0% | |
| CATATGGGTGGAAGGGTAAA+AGG | - | 50582:577-596 | None:intergenic | 45.0% | |
| CTGGATCTGGTGCAAATAGT+TGG | + | 50582:264-283 | MS.gene23102:CDS | 45.0% | |
| CTTGAAGACCAGATTATGGC+AGG | - | 50582:2928-2947 | None:intergenic | 45.0% | |
| GCTGCACAGCTTCAATTTAG+AGG | + | 50582:1255-1274 | MS.gene23102:CDS | 45.0% | |
| TCAGTACACATATGGGTGGA+AGG | - | 50582:585-604 | None:intergenic | 45.0% | |
| TTGCGATTGCCGTTGGAAAT+TGG | + | 50582:2847-2866 | MS.gene23102:CDS | 45.0% | |
| TTTCCAACGGCAATCGCAAT+TGG | - | 50582:2846-2865 | None:intergenic | 45.0% | |
| ! | CTTTTATCTGGATGCTCTGC+GGG | + | 50582:1420-1439 | MS.gene23102:CDS | 45.0% |
| ! | TATGGCAGGTATTGTCACAG+GGG | - | 50582:2914-2933 | None:intergenic | 45.0% |
| ! | TGGAGGTGTAGTTAGCTTAC+AGG | + | 50582:1670-1689 | MS.gene23102:CDS | 45.0% |
| ! | TTCCTCGAAGTGCTATGGTA+TGG | + | 50582:2117-2136 | MS.gene23102:intron | 45.0% |
| !! | CAAAGTGAGGTACTGTGATG+GGG | + | 50582:679-698 | MS.gene23102:CDS | 45.0% |
| !! | GTCAAAGTGAGGTACTGTGA+TGG | + | 50582:677-696 | MS.gene23102:CDS | 45.0% |
| AATGCGGGGCTAGACTTTCT+TGG | - | 50582:2218-2237 | None:intergenic | 50.0% | |
| ATGAGGATCTGCTGAATGCG+GGG | - | 50582:2232-2251 | None:intergenic | 50.0% | |
| CAGCAGATCCTCATGGATCT+TGG | + | 50582:2238-2257 | MS.gene23102:CDS | 50.0% | |
| CAGTGGAGACAGTCAAAACG+AGG | + | 50582:709-728 | MS.gene23102:CDS | 50.0% | |
| CATGAGGATCTGCTGAATGC+GGG | - | 50582:2233-2252 | None:intergenic | 50.0% | |
| CCATGAGGATCTGCTGAATG+CGG | - | 50582:2234-2253 | None:intergenic | 50.0% | |
| CTCTCCCCTCCTTAACAACA+TGG | + | 50582:2544-2563 | MS.gene23102:CDS | 50.0% | |
| GCTGCATTCAGCAGAAACAG+TGG | - | 50582:2006-2025 | None:intergenic | 50.0% | |
| GGGAATGAAGAACGCCAACA+AGG | + | 50582:1320-1339 | MS.gene23102:CDS | 50.0% | |
| GGTGGGGAGAGGTAAAACTA+TGG | + | 50582:929-948 | MS.gene23102:intron | 50.0% | |
| TAACCACCTGGACCCAACTT+CGG | + | 50582:1854-1873 | MS.gene23102:CDS | 50.0% | |
| TGAAGCTGTGCAGCCTGAAA+GGG | - | 50582:1249-1268 | None:intergenic | 50.0% | |
| TGCAGCTTATGATGCATGGC+AGG | + | 50582:2020-2039 | MS.gene23102:CDS | 50.0% | |
| TTGAAGCTGTGCAGCCTGAA+AGG | - | 50582:1250-1269 | None:intergenic | 50.0% | |
| TTTGCACCAGATCCAGATCC+GGG | - | 50582:260-279 | None:intergenic | 50.0% | |
| ! | CTTTTCTTCAGGGAGGAGGA+TGG | + | 50582:424-443 | MS.gene23102:intron | 50.0% |
| ATCCAGATCCGGGATGGAAG+TGG | - | 50582:250-269 | None:intergenic | 55.0% | |
| ATTACCTCACGCAGCCTGCT+GGG | + | 50582:907-926 | MS.gene23102:intron | 55.0% | |
| CAGCCAATTGCGATTGCCGT+TGG | + | 50582:2840-2859 | MS.gene23102:intron | 55.0% | |
| CAGGCAATGATGCAGGCTAG+AGG | - | 50582:1572-1591 | None:intergenic | 55.0% | |
| CCGCATTCAGCAGATCCTCA+TGG | + | 50582:2231-2250 | MS.gene23102:CDS | 55.0% | |
| CCTGGTTACCACTTCCATCC+CGG | + | 50582:239-258 | MS.gene23102:CDS | 55.0% | |
| GAAGCTGTGCAGCCTGAAAG+GGG | - | 50582:1248-1267 | None:intergenic | 55.0% | |
| TACCACTTCCATCCCGGATC+TGG | + | 50582:245-264 | MS.gene23102:CDS | 55.0% | |
| TATTACCTCACGCAGCCTGC+TGG | + | 50582:906-925 | MS.gene23102:intron | 55.0% | |
| TTACCGAAGTTGGGTCCAGG+TGG | - | 50582:1860-1879 | None:intergenic | 55.0% | |
| TTATCTGGATGCTCTGCGGG+TGG | + | 50582:1423-1442 | MS.gene23102:CDS | 55.0% | |
| TTCCATCCCGGATCTGGATC+TGG | + | 50582:251-270 | MS.gene23102:CDS | 55.0% | |
| ! | TATCTGGGGGGCACACATTG+AGG | + | 50582:1639-1658 | MS.gene23102:CDS | 55.0% |
| ! | TGTGATGGGGCGTCTTTCAG+TGG | + | 50582:692-711 | MS.gene23102:CDS | 55.0% |
| CACCAGATCCAGATCCGGGA+TGG | - | 50582:256-275 | None:intergenic | 60.0% | |
| CCGGGATGGAAGTGGTAACC+AGG | - | 50582:242-261 | None:intergenic | 60.0% | |
| TTACCTCACGCAGCCTGCTG+GGG | + | 50582:908-927 | MS.gene23102:intron | 60.0% | |
| TGGATGCTCTGCGGGTGGTC+TGG | + | 50582:1428-1447 | MS.gene23102:CDS | 65.0% | |
| TTACCTCTCCCCACCCCAGC+AGG | - | 50582:924-943 | None:intergenic | 65.0% | |
| CTCACGCAGCCTGCTGGGGT+GGG | + | 50582:912-931 | MS.gene23102:intron | 70.0% | |
| TCACGCAGCCTGCTGGGGTG+GGG | + | 50582:913-932 | MS.gene23102:intron | 70.0% | |
| CAGCCTGCTGGGGTGGGGAG+AGG | + | 50582:918-937 | MS.gene23102:intron | 75.0% | |
| CCACCCCAGCAGGCTGCGTG+AGG | - | 50582:914-933 | None:intergenic | 75.0% | |
| CCTCACGCAGCCTGCTGGGG+TGG | + | 50582:911-930 | MS.gene23102:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50582 | gene | 220 | 2950 | 220 | ID=MS.gene23102 |
| 50582 | mRNA | 220 | 2950 | 220 | ID=MS.gene23102.t1;Parent=MS.gene23102 |
| 50582 | exon | 220 | 301 | 220 | ID=MS.gene23102.t1.exon1;Parent=MS.gene23102.t1 |
| 50582 | CDS | 220 | 301 | 220 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| 50582 | exon | 435 | 565 | 435 | ID=MS.gene23102.t1.exon2;Parent=MS.gene23102.t1 |
| 50582 | CDS | 435 | 565 | 435 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| 50582 | exon | 657 | 730 | 657 | ID=MS.gene23102.t1.exon3;Parent=MS.gene23102.t1 |
| 50582 | CDS | 657 | 730 | 657 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| 50582 | exon | 1255 | 1341 | 1255 | ID=MS.gene23102.t1.exon4;Parent=MS.gene23102.t1 |
| 50582 | CDS | 1255 | 1341 | 1255 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| 50582 | exon | 1417 | 1541 | 1417 | ID=MS.gene23102.t1.exon5;Parent=MS.gene23102.t1 |
| 50582 | CDS | 1417 | 1541 | 1417 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| 50582 | exon | 1631 | 1691 | 1631 | ID=MS.gene23102.t1.exon6;Parent=MS.gene23102.t1 |
| 50582 | CDS | 1631 | 1691 | 1631 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| 50582 | exon | 1822 | 1875 | 1822 | ID=MS.gene23102.t1.exon7;Parent=MS.gene23102.t1 |
| 50582 | CDS | 1822 | 1875 | 1822 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| 50582 | exon | 1964 | 2041 | 1964 | ID=MS.gene23102.t1.exon8;Parent=MS.gene23102.t1 |
| 50582 | CDS | 1964 | 2041 | 1964 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| 50582 | exon | 2213 | 2318 | 2213 | ID=MS.gene23102.t1.exon9;Parent=MS.gene23102.t1 |
| 50582 | CDS | 2213 | 2318 | 2213 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| 50582 | exon | 2420 | 2565 | 2420 | ID=MS.gene23102.t1.exon10;Parent=MS.gene23102.t1 |
| 50582 | CDS | 2420 | 2565 | 2420 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| 50582 | exon | 2843 | 2950 | 2843 | ID=MS.gene23102.t1.exon11;Parent=MS.gene23102.t1 |
| 50582 | CDS | 2843 | 2950 | 2843 | ID=cds.MS.gene23102.t1;Parent=MS.gene23102.t1 |
| Gene Sequence |
| Protein sequence |
