AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050825


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050825.t1 MTR_7g110900 92.308 455 21 3 1 455 1 441 0.0 862
MS.gene050825.t1 MTR_7g110900 92.056 428 20 3 1 428 1 414 0.0 811
MS.gene050825.t1 MTR_1g085620 79.412 374 77 0 55 428 29 402 0.0 651
MS.gene050825.t1 MTR_7g111280 71.117 367 106 0 63 429 53 419 0.0 585
MS.gene050825.t1 MTR_4g124320 70.380 368 109 0 62 429 54 421 0.0 565
MS.gene050825.t1 MTR_1g085070 69.149 376 100 2 54 428 41 401 0.0 564
MS.gene050825.t1 MTR_1g085620 81.481 297 55 0 132 428 1 297 0.0 533
MS.gene050825.t1 MTR_8g072010 50.269 372 183 1 59 428 20 391 4.97e-149 430
MS.gene050825.t1 MTR_1g101000 54.032 372 166 3 61 427 34 405 1.16e-145 423
MS.gene050825.t1 MTR_1g101000 54.032 372 166 3 61 427 34 405 1.22e-145 422
MS.gene050825.t1 MTR_1g101020 53.226 372 169 3 61 427 34 405 6.67e-144 417
MS.gene050825.t1 MTR_8g072000 49.051 369 186 1 62 428 24 392 1.44e-143 416
MS.gene050825.t1 MTR_8g072000 48.919 370 187 1 62 429 55 424 3.61e-143 416
MS.gene050825.t1 MTR_4g124320 69.259 270 78 2 62 331 54 318 9.68e-141 406
MS.gene050825.t1 MTR_7g060760 50.820 366 174 2 65 428 56 417 3.53e-140 408
MS.gene050825.t1 MTR_5g042650 48.767 365 181 2 65 427 28 388 2.80e-135 395
MS.gene050825.t1 MTR_1g101000 52.601 346 158 4 61 400 34 379 1.28e-128 378
MS.gene050825.t1 MTR_7g006750 53.191 94 44 0 205 298 467 560 2.87e-26 112
MS.gene050825.t1 MTR_1g036590 58.537 82 34 0 246 327 270 351 5.33e-25 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050825.t1 AT3G62060 70.000 390 116 1 59 447 48 437 0.0 593
MS.gene050825.t1 AT3G05910 72.678 366 99 1 63 428 50 414 0.0 590
MS.gene050825.t1 AT3G62060 72.237 371 102 1 59 428 48 418 0.0 588
MS.gene050825.t1 AT2G46930 71.196 368 106 0 62 429 49 416 0.0 588
MS.gene050825.t1 AT1G57590 71.154 364 105 0 65 428 79 442 0.0 583
MS.gene050825.t1 AT5G26670 67.857 392 124 1 39 428 24 415 0.0 578
MS.gene050825.t1 AT5G26670 69.360 297 91 0 132 428 1 297 3.51e-161 457
MS.gene050825.t1 AT5G26670 69.360 297 91 0 132 428 1 297 3.51e-161 457
MS.gene050825.t1 AT5G26670 69.360 297 91 0 132 428 1 297 3.51e-161 457
MS.gene050825.t1 AT4G19420 55.586 367 161 1 64 428 23 389 1.94e-159 456
MS.gene050825.t1 AT4G19420 55.586 367 161 1 64 428 23 389 1.94e-159 456
MS.gene050825.t1 AT1G09550 58.721 344 141 1 64 407 40 382 1.32e-153 441
MS.gene050825.t1 AT4G19420 50.746 402 161 2 64 428 23 424 2.90e-152 439
MS.gene050825.t1 AT5G23870 53.533 368 165 4 66 427 35 402 4.03e-147 426
MS.gene050825.t1 AT5G23870 53.533 368 165 4 66 427 35 402 4.03e-147 426
MS.gene050825.t1 AT5G23870 53.533 368 165 4 66 427 35 402 4.81e-147 426
MS.gene050825.t1 AT3G05910 75.194 258 63 1 63 320 50 306 6.78e-147 421
MS.gene050825.t1 AT5G23870 53.533 368 165 4 66 427 35 402 9.08e-147 426
MS.gene050825.t1 AT3G09410 48.711 388 194 2 47 429 40 427 8.59e-143 415
MS.gene050825.t1 AT5G45280 48.476 361 183 2 66 423 24 384 1.97e-136 398
MS.gene050825.t1 AT4G19410 48.199 361 184 2 66 423 24 384 5.48e-136 397
MS.gene050825.t1 AT3G09405 46.615 384 200 2 43 423 28 409 2.89e-131 385
MS.gene050825.t1 AT4G19410 48.547 344 175 1 66 407 24 367 1.79e-130 387
MS.gene050825.t1 AT3G09410 48.580 352 176 2 47 393 40 391 1.14e-126 373
MS.gene050825.t1 AT5G45280 50.877 285 138 1 66 348 24 308 1.28e-111 333
MS.gene050825.t1 AT3G09405 45.215 303 161 2 124 423 2 302 5.08e-101 304
MS.gene050825.t1 AT4G19420 58.744 223 90 1 62 282 21 243 2.07e-93 285

Find 106 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTCACTTTGGTAGATTT+TGG 0.102250 7.4:-5160009 None:intergenic
TACTTTGGAGGATCTGAATT+TGG 0.129041 7.4:-5160819 None:intergenic
TTGCGATTGCCGTTGGAAAT+TGG 0.247498 7.4:+5161367 MS.gene050825:CDS
TGGAGGTGTAGTTAGCTTAC+AGG 0.258857 7.4:+5160190 MS.gene050825:CDS
TCATGTAGAACTGATATATC+TGG 0.286074 7.4:+5160143 MS.gene050825:intron
AATGCGGGGCTAGACTTTCT+TGG 0.319923 7.4:-5160735 None:intergenic
AATTTAGAGGACAGAAAATA+TGG 0.324688 7.4:+5159788 MS.gene050825:CDS
CTCACTTGAAGACCAGATTA+TGG 0.340475 7.4:-5161449 None:intergenic
GCTGCACAGCTTCAATTTAG+AGG 0.354360 7.4:+5159775 MS.gene050825:CDS
AATCAGAAAATTACCGAAGT+TGG 0.357974 7.4:-5160387 None:intergenic
ACTTTGGAGGATCTGAATTT+GGG 0.360290 7.4:-5160818 None:intergenic
ATCCCACTCACTCTCATTCA+TGG 0.363631 7.4:+5158340 MS.gene050825:CDS
CACACATTGAGGAATCTCTT+TGG 0.368358 7.4:+5160170 MS.gene050825:CDS
TACCACTTCCATCCCGGATC+TGG 0.372412 7.4:+5158766 MS.gene050825:CDS
ATAATGTTTGTCAGTATGTT+TGG 0.373579 7.4:+5158726 MS.gene050825:intron
TTCCATCCCGGATCTGGATC+TGG 0.382531 7.4:+5158772 MS.gene050825:CDS
TCTCTCACCTCGGGATATCT+TGG 0.388144 7.4:+5158240 MS.gene050825:CDS
TCATGAGAGGTTGAGGCAGC+AGG 0.395767 7.4:-5158318 None:intergenic
ACAAGAATTTATGAATAATC+CGG 0.416697 7.4:-5160994 None:intergenic
TGACAATACCTGCCATAATC+TGG 0.417076 7.4:+5161437 MS.gene050825:CDS
CAGCAGATCCTCATGGATCT+TGG 0.417631 7.4:+5160758 MS.gene050825:CDS
TTTCCAACGGCAATCGCAAT+TGG 0.423077 7.4:-5161363 None:intergenic
TCATGCATACCATGTTGTTA+AGG 0.424811 7.4:-5161073 None:intergenic
TGGATGCTCTGCGGGTGGTC+TGG 0.427319 7.4:+5159948 MS.gene050825:CDS
TCCAATATGGAAAACCTTGT+TGG 0.438519 7.4:-5159854 None:intergenic
ATCAGAAAATTACCGAAGTT+GGG 0.457711 7.4:-5160386 None:intergenic
CGATGTCGTTTCAGTTCCAT+TGG 0.458197 7.4:+5158267 MS.gene050825:CDS
AAATAGTTGGCTCATTCAAT+TGG 0.461267 7.4:+5158798 MS.gene050825:CDS
CATGAGGATCTGCTGAATGC+GGG 0.468931 7.4:-5160750 None:intergenic
TTGCTCAATAATCCAGTGAA+TGG 0.470456 7.4:-5159043 None:intergenic
CATGTAGAACTGATATATCT+GGG 0.473034 7.4:+5160144 MS.gene050825:intron
GTGAAATGTTTGAGTGATGC+TGG 0.478196 7.4:+5160024 MS.gene050825:CDS
CAGCCAATTGCGATTGCCGT+TGG 0.487578 7.4:+5161360 MS.gene050825:intron
CTGGATCTGGTGCAAATAGT+TGG 0.489001 7.4:+5158785 MS.gene050825:CDS
AGGTTGAGGCAGCAGGGGAG+AGG 0.498501 7.4:-5158311 None:intergenic
TCAAAGTGAGGTACTGTGAT+GGG 0.499780 7.4:+5159198 MS.gene050825:CDS
TGCTATATTCCCGCTCTACA+AGG 0.500855 7.4:+5162930 MS.gene050825:CDS
TGTTTGGATGGAACTTTACC+TGG 0.506783 7.4:+5158742 MS.gene050825:CDS
CCTGGTTACCACTTCCATCC+CGG 0.507770 7.4:+5158760 MS.gene050825:CDS
AGTGGGATCATGAGAGGTTG+AGG 0.515339 7.4:-5158325 None:intergenic
GAGTGTCAAAATTACTTTGG+AGG 0.515481 7.4:-5160831 None:intergenic
ATCACTCAAACATTTCACTT+TGG 0.516658 7.4:-5160019 None:intergenic
ATTCATGGAGCTGATTCAAA+AGG 0.519185 7.4:+5158355 MS.gene050825:CDS
ATTATGGCAGGTATTGTCAC+AGG 0.520288 7.4:-5161433 None:intergenic
ATTTGCACCAGATCCAGATC+CGG 0.521168 7.4:-5158779 None:intergenic
TCTAAAGACACAACTTCTGA+TGG 0.522097 7.4:-5158975 None:intergenic
GGAGCTGATTCAAAAGGAGC+AGG 0.529067 7.4:+5158361 MS.gene050825:CDS
AAAAGTCAACCTTGTAGAGC+GGG 0.529390 7.4:-5162939 None:intergenic
AATAAAGCTGAAGAAAATCC+TGG 0.530795 7.4:+5159064 MS.gene050825:CDS
CCGGGATGGAAGTGGTAACC+AGG 0.532137 7.4:-5158760 None:intergenic
CATGAGAGGTTGAGGCAGCA+GGG 0.533233 7.4:-5158317 None:intergenic
TAGTTGGCTCATTCAATTGG+AGG 0.533513 7.4:+5158801 MS.gene050825:CDS
ATCCAGATCCGGGATGGAAG+TGG 0.540621 7.4:-5158768 None:intergenic
GTTCTGAGAAATGAGAAGAA+TGG 0.547125 7.4:+5158135 None:intergenic
ACGCGGTTCCTCAAAATACA+TGG 0.548149 7.4:+5159009 MS.gene050825:CDS
CTTGAAGACCAGATTATGGC+AGG 0.552753 7.4:-5161445 None:intergenic
ACATTGAGGAATCTCTTTGG+AGG 0.553002 7.4:+5160173 MS.gene050825:CDS
TTTGCACCAGATCCAGATCC+GGG 0.553031 7.4:-5158778 None:intergenic
TGTGATGGGGCGTCTTTCAG+TGG 0.553061 7.4:+5159212 MS.gene050825:CDS
ATGAGAGGTTGAGGCAGCAG+GGG 0.553504 7.4:-5158316 None:intergenic
TGCATACCATGTTGTTAAGG+AGG 0.557052 7.4:-5161070 None:intergenic
GACACAGAATCTCTCACCTC+GGG 0.557126 7.4:+5158231 MS.gene050825:CDS
GCATACCATGTTGTTAAGGA+GGG 0.557350 7.4:-5161069 None:intergenic
CACCAGATCCAGATCCGGGA+TGG 0.559180 7.4:-5158774 None:intergenic
TGTTTGTCAGTATGTTTGGA+TGG 0.563064 7.4:+5158730 MS.gene050825:intron
AAATTACCGAAGTTGGGTCC+AGG 0.563109 7.4:-5160380 None:intergenic
CCGCATTCAGCAGATCCTCA+TGG 0.567304 7.4:+5160751 MS.gene050825:CDS
CAGTGTTGGTAAATCTGCCA+TGG 0.575081 7.4:+5162780 MS.gene050825:intron
TAAAAGTCAACCTTGTAGAG+CGG 0.575730 7.4:-5162940 None:intergenic
TGCAGCTTATGATGCATGGC+AGG 0.576179 7.4:+5160540 MS.gene050825:CDS
ATGTATCTTGTCTCTCCGAT+TGG 0.579548 7.4:-5161028 None:intergenic
ATTGAAGAATTAATGTCGAA+GGG 0.581479 7.4:+5159820 MS.gene050825:CDS
TAACCACCTGGACCCAACTT+CGG 0.583326 7.4:+5160374 MS.gene050825:CDS
CTCTCCCCTCCTTAACAACA+TGG 0.586154 7.4:+5161064 MS.gene050825:CDS
AATTGAAGAATTAATGTCGA+AGG 0.586251 7.4:+5159819 MS.gene050825:CDS
GCTCCATGAATGAGAGTGAG+TGG 0.593083 7.4:-5158343 None:intergenic
TTATCTGGATGCTCTGCGGG+TGG 0.594030 7.4:+5159943 MS.gene050825:CDS
CCATGAGGATCTGCTGAATG+CGG 0.598787 7.4:-5160751 None:intergenic
GTCAAAGTGAGGTACTGTGA+TGG 0.606987 7.4:+5159197 MS.gene050825:CDS
TGAATGCAGCTTATGATGCA+TGG 0.609693 7.4:+5160536 MS.gene050825:CDS
TGTAGAGCGGGAATATAGCA+TGG 0.614931 7.4:-5162927 None:intergenic
CGGGAATATAGCATGGAGGT+AGG 0.623170 7.4:-5162920 None:intergenic
CATACCATGTTGTTAAGGAG+GGG 0.624484 7.4:-5161068 None:intergenic
CTCCATGAATGAGAGTGAGT+GGG 0.626990 7.4:-5158342 None:intergenic
ATGAGGATCTGCTGAATGCG+GGG 0.632595 7.4:-5160749 None:intergenic
GGGAATGAAGAACGCCAACA+AGG 0.633094 7.4:+5159840 MS.gene050825:CDS
AGAGTGAGTGGGATCATGAG+AGG 0.634312 7.4:-5158331 None:intergenic
AATCGGAGAGACAAGATACA+TGG 0.638574 7.4:+5161030 MS.gene050825:CDS
GAACGTATATCATCTGCCAA+TGG 0.639888 7.4:-5158283 None:intergenic
ATGTAGAACTGATATATCTG+GGG 0.646188 7.4:+5160145 MS.gene050825:intron
CAAAGTGAGGTACTGTGATG+GGG 0.646787 7.4:+5159199 MS.gene050825:CDS
CAAATGCTAAATGACATCAA+AGG 0.647217 7.4:+5160951 MS.gene050825:CDS
AGACACAGAATCTCTCACCT+CGG 0.647432 7.4:+5158230 MS.gene050825:CDS
TGTAGAACTGATATATCTGG+GGG 0.648311 7.4:+5160146 MS.gene050825:intron
GCTGCATTCAGCAGAAACAG+TGG 0.652873 7.4:-5160523 None:intergenic
TTATGGCAGGTATTGTCACA+GGG 0.675845 7.4:-5161432 None:intergenic
CAATTATTCCAAGATCCATG+AGG 0.680551 7.4:-5160766 None:intergenic
TTACCGAAGTTGGGTCCAGG+TGG 0.682863 7.4:-5160377 None:intergenic
CAGTGGAGACAGTCAAAACG+AGG 0.693681 7.4:+5159229 MS.gene050825:CDS
ACTGGAACAGAGTCAAAGTG+AGG 0.697951 7.4:+5159186 MS.gene050825:CDS
TGGTAGACTCTCAATCCACA+AGG 0.698984 7.4:+5162800 MS.gene050825:CDS
GATCTCGTGAGATCTAACTG+AGG 0.728818 7.4:-5158203 None:intergenic
TATGGCAGGTATTGTCACAG+GGG 0.750427 7.4:-5161431 None:intergenic
TGTGGATTGAGAGTCTACCA+TGG 0.760817 7.4:-5162797 None:intergenic
GTAGAACTGATATATCTGGG+GGG 0.773485 7.4:+5160147 MS.gene050825:intron
AGAGCGGGAATATAGCATGG+AGG 0.786321 7.4:-5162924 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTAATAAAATGATAGAT+TGG + chr7.4:5161775-5161794 MS.gene050825:intron 15.0%
!! TACTTAGTTAAATTATTCTT+TGG + chr7.4:5159354-5159373 MS.gene050825:intron 15.0%
!! TTGCTTTAATAAAATTTCTT+TGG + chr7.4:5161622-5161641 MS.gene050825:intron 15.0%
!! TTGTTATAGAAAAACATTAT+TGG + chr7.4:5161554-5161573 MS.gene050825:intron 15.0%
!!! ATAAAAGTATAATATCTTCA+AGG - chr7.4:5161681-5161700 None:intergenic 15.0%
!!! TAAAAGTATAATATCTTCAA+GGG - chr7.4:5161680-5161699 None:intergenic 15.0%
!! AAAATCCTCTTAACAAAAAT+TGG - chr7.4:5159289-5159308 None:intergenic 20.0%
!! AAGAATGATAAATTCACAAA+TGG - chr7.4:5161532-5161551 None:intergenic 20.0%
!! ACAAGAATTTATGAATAATC+CGG - chr7.4:5160997-5161016 None:intergenic 20.0%
!! TAAATTCATCATTACAAAAC+TGG + chr7.4:5162580-5162599 MS.gene050825:intron 20.0%
!! TAGAGACTAAAAATTATTTG+TGG + chr7.4:5161207-5161226 MS.gene050825:intron 20.0%
!! TCAATCTATCAAATATGATT+TGG + chr7.4:5162008-5162027 MS.gene050825:intron 20.0%
!! TGTATGTCAATGATAATAAT+AGG - chr7.4:5159317-5159336 None:intergenic 20.0%
!!! AAATCTCTTTTCTAATGAAT+GGG + chr7.4:5159684-5159703 MS.gene050825:intron 20.0%
!!! AATTATTCTTTGGAAATTTG+TGG + chr7.4:5159364-5159383 MS.gene050825:intron 20.0%
!!! CATATCATCATAAGTTTTTT+TGG - chr7.4:5158504-5158523 None:intergenic 20.0%
!!! CATTTTATTAACTTGAAAAG+TGG - chr7.4:5161769-5161788 None:intergenic 20.0%
!!! GTTATGTGTTATAATTTTTG+TGG + chr7.4:5159134-5159153 MS.gene050825:intron 20.0%
!!! TGCTAATGATTTTTTTTTTC+AGG + chr7.4:5159915-5159934 MS.gene050825:intron 20.0%
!!! TTTTTCCAATTTTTGTTAAG+AGG + chr7.4:5159281-5159300 MS.gene050825:intron 20.0%
! AAAAAAATCATTAGCATCCA+TGG - chr7.4:5159911-5159930 None:intergenic 25.0%
! AAAATTACGACATTCCAATA+TGG - chr7.4:5159870-5159889 None:intergenic 25.0%
! AATTGAAGAATTAATGTCGA+AGG + chr7.4:5159819-5159838 MS.gene050825:CDS 25.0%
! AATTTAGAGGACAGAAAATA+TGG + chr7.4:5159788-5159807 MS.gene050825:CDS 25.0%
! ACAATTATATCCAAGTTTAC+AGG - chr7.4:5160111-5160130 None:intergenic 25.0%
! ATAATGTTTGTCAGTATGTT+TGG + chr7.4:5158726-5158745 MS.gene050825:intron 25.0%
! ATCAAAAAACCAATTTCCAA+CGG - chr7.4:5161379-5161398 None:intergenic 25.0%
! ATTGAAGAATTAATGTCGAA+GGG + chr7.4:5159820-5159839 MS.gene050825:CDS 25.0%
! CTGAGAACAATAAAAAGAAA+GGG - chr7.4:5161303-5161322 None:intergenic 25.0%
! CTTAAAATCAACCCAATATT+CGG + chr7.4:5162181-5162200 MS.gene050825:intron 25.0%
! GGTCTATTATATTCACTTAT+AGG + chr7.4:5161599-5161618 MS.gene050825:intron 25.0%
! TCTGAGAACAATAAAAAGAA+AGG - chr7.4:5161304-5161323 None:intergenic 25.0%
! TGAATTAGAGAAAAGAAAGA+AGG - chr7.4:5162725-5162744 None:intergenic 25.0%
! TGGAATGATTACATTTGAAA+TGG + chr7.4:5161958-5161977 MS.gene050825:intron 25.0%
! TTAAAATCAACCCAATATTC+GGG + chr7.4:5162182-5162201 MS.gene050825:intron 25.0%
! TTTGAGTCATTACAATTCAT+TGG + chr7.4:5161911-5161930 MS.gene050825:intron 25.0%
!! AAAAAACACCATTCATTTTG+TGG + chr7.4:5159391-5159410 MS.gene050825:intron 25.0%
!! AATCTTTTCCTCTTCTATTT+CGG + chr7.4:5161154-5161173 MS.gene050825:intron 25.0%
!! ATACAAGTTTTCTAACAGAA+AGG - chr7.4:5160286-5160305 None:intergenic 25.0%
!! ATCCAATTATAATTTTCCCA+AGG + chr7.4:5161699-5161718 MS.gene050825:intron 25.0%
!! GAAATCTCTTTTCTAATGAA+TGG + chr7.4:5159683-5159702 MS.gene050825:intron 25.0%
!! TAGAAAAACATTATTGGCTA+AGG + chr7.4:5161560-5161579 MS.gene050825:intron 25.0%
!! TGTTTGAAAACTTTTCTTCA+GGG + chr7.4:5158935-5158954 MS.gene050825:intron 25.0%
!!! ATCAGTAGCTTATTTTCATA+AGG + chr7.4:5158537-5158556 MS.gene050825:intron 25.0%
!!! ATGTTCAAGTATTTTGATCA+TGG + chr7.4:5158825-5158844 MS.gene050825:intron 25.0%
!!! CTTTTGTTTATATTTGAGTC+CGG + chr7.4:5162031-5162050 MS.gene050825:intron 25.0%
!!! GGGTTGATTTTAAGATTTAA+GGG - chr7.4:5162175-5162194 None:intergenic 25.0%
!!! TAAGAATTTTAGTTCCATCA+TGG - chr7.4:5162874-5162893 None:intergenic 25.0%
!!! TGGGTTGATTTTAAGATTTA+AGG - chr7.4:5162176-5162195 None:intergenic 25.0%
!!! TGTTCAAGTATTTTGATCAT+GGG + chr7.4:5158826-5158845 MS.gene050825:intron 25.0%
!!! TTGTTTTTCCATGTATTTTG+AGG - chr7.4:5159020-5159039 None:intergenic 25.0%
!!! TTTATTAGTCTTTGCTAGTA+TGG + chr7.4:5159658-5159677 MS.gene050825:intron 25.0%
AACAATAAAAAGAAAGGGAG+AGG - chr7.4:5161298-5161317 None:intergenic 30.0%
AAGAAAGAAGGTGAAATTTC+TGG - chr7.4:5162713-5162732 None:intergenic 30.0%
AAGTGGTGCAATTAAAAAGA+AGG - chr7.4:5161752-5161771 None:intergenic 30.0%
AATAAAGCTGAAGAAAATCC+TGG + chr7.4:5159064-5159083 MS.gene050825:CDS 30.0%
AATCAGAAAATTACCGAAGT+TGG - chr7.4:5160390-5160409 None:intergenic 30.0%
ATCACTCAAACATTTCACTT+TGG - chr7.4:5160022-5160041 None:intergenic 30.0%
ATCAGAAAATTACCGAAGTT+GGG - chr7.4:5160389-5160408 None:intergenic 30.0%
ATGTAGAACTGATATATCTG+GGG + chr7.4:5160145-5160164 MS.gene050825:intron 30.0%
ATGTTGGATTGTATTGGAAT+AGG + chr7.4:5162311-5162330 MS.gene050825:intron 30.0%
ATTCCAAAAATACCCTTTCA+CGG - chr7.4:5161944-5161963 None:intergenic 30.0%
CAAAGTTATTGTCTTTCGTA+CGG + chr7.4:5161473-5161492 MS.gene050825:intron 30.0%
CAAATGCTAAATGACATCAA+AGG + chr7.4:5160951-5160970 MS.gene050825:CDS 30.0%
CATGTAGAACTGATATATCT+GGG + chr7.4:5160144-5160163 MS.gene050825:intron 30.0%
CCTAATATCACAACTTAAGA+TGG - chr7.4:5162559-5162578 None:intergenic 30.0%
GAGTCAATCTAGATTTCATA+AGG + chr7.4:5161812-5161831 MS.gene050825:intron 30.0%
GTATGAATTCACAAGTCAAT+TGG - chr7.4:5159746-5159765 None:intergenic 30.0%
GTCCTTGGGAAAATTATAAT+TGG - chr7.4:5161704-5161723 None:intergenic 30.0%
TAACTATCCAGTGTTCTATA+AGG - chr7.4:5162445-5162464 None:intergenic 30.0%
TAAGGGATCATGATACAATA+GGG - chr7.4:5162158-5162177 None:intergenic 30.0%
TATTCAATCATAGATGTCCA+TGG + chr7.4:5159891-5159910 MS.gene050825:intron 30.0%
TCATGTAGAACTGATATATC+TGG + chr7.4:5160143-5160162 MS.gene050825:intron 30.0%
TGACTCAAATGATCGATAAA+AGG - chr7.4:5161900-5161919 None:intergenic 30.0%
TTAAGGGATCATGATACAAT+AGG - chr7.4:5162159-5162178 None:intergenic 30.0%
TTCTTAAAATGAGACGATGT+AGG - chr7.4:5162688-5162707 None:intergenic 30.0%
TTTCATGTCTTCACTATTCA+TGG + chr7.4:5158643-5158662 MS.gene050825:intron 30.0%
! AAATAGTTGGCTCATTCAAT+TGG + chr7.4:5158798-5158817 MS.gene050825:CDS 30.0%
! ACATGATCGATCAAATTTTG+AGG - chr7.4:5160496-5160515 None:intergenic 30.0%
! ACCTAGTATTTTGTCTCAAA+TGG + chr7.4:5158675-5158694 MS.gene050825:intron 30.0%
! CATTTCACTTTGGTAGATTT+TGG - chr7.4:5160012-5160031 None:intergenic 30.0%
! CCATCTTAAGTTGTGATATT+AGG + chr7.4:5162556-5162575 MS.gene050825:intron 30.0%
! CTGAAGAAAAGTTTTCAAAC+AGG - chr7.4:5158936-5158955 None:intergenic 30.0%
! CTGTTTGAAAACTTTTCTTC+AGG + chr7.4:5158934-5158953 MS.gene050825:intron 30.0%
! GCAAATGTACATTTTTCTTG+TGG + chr7.4:5159580-5159599 MS.gene050825:intron 30.0%
! TAATGCAGACTCAGTAATTT+TGG - chr7.4:5161657-5161676 None:intergenic 30.0%
! TCCATTTGAGACAAAATACT+AGG - chr7.4:5158679-5158698 None:intergenic 30.0%
!! AATTTGTTGAGTGACTTGAA+TGG + chr7.4:5162391-5162410 MS.gene050825:intron 30.0%
!! ACTGTACTATTTTAGAAGCA+CGG - chr7.4:5161109-5161128 None:intergenic 30.0%
!! AGAGAGTGTCAAAATTACTT+TGG - chr7.4:5160837-5160856 None:intergenic 30.0%
!! ATTGACGTCTTTGAAATTGT+AGG + chr7.4:5160320-5160339 MS.gene050825:intron 30.0%
!! TAGATTTTGGAAACAAGCTT+TGG - chr7.4:5159999-5160018 None:intergenic 30.0%
!! TAGCTTATTTTCATAAGGTC+TGG + chr7.4:5158542-5158561 MS.gene050825:intron 30.0%
!! TGCTTCTAAAATAGTACAGT+TGG + chr7.4:5161109-5161128 MS.gene050825:intron 30.0%
!!! TTTTTTCAGGCTCTTTTATC+TGG + chr7.4:5159928-5159947 MS.gene050825:intron 30.0%
AAAAAGTTGTCTTAACCACC+TGG + chr7.4:5160362-5160381 MS.gene050825:CDS 35.0%
AAGGGATCATGATACAATAG+GGG - chr7.4:5162157-5162176 None:intergenic 35.0%
ACGTCCATCAGTAATTGATT+TGG + chr7.4:5162359-5162378 MS.gene050825:intron 35.0%
AGAGGTAAAACTATGGTTGT+TGG + chr7.4:5159456-5159475 MS.gene050825:intron 35.0%
AGTTAAAGAGGTCATGTGTT+TGG + chr7.4:5162284-5162303 MS.gene050825:intron 35.0%
AGTTCATCCTTATAGAACAC+TGG + chr7.4:5162435-5162454 MS.gene050825:intron 35.0%
ATAGACCCAAAGAGTTGTAA+TGG - chr7.4:5161586-5161605 None:intergenic 35.0%
ATTGCGAAGATGGGAAATAA+TGG - chr7.4:5162850-5162869 None:intergenic 35.0%
CAATTATTCCAAGATCCATG+AGG - chr7.4:5160769-5160788 None:intergenic 35.0%
CACACCAAATCAATTACTGA+TGG - chr7.4:5162366-5162385 None:intergenic 35.0%
CCTCTTCTATTTCGGAAAAT+TGG + chr7.4:5161162-5161181 MS.gene050825:intron 35.0%
GAAAAACAACTACCATTCAC+TGG + chr7.4:5159031-5159050 MS.gene050825:CDS 35.0%
GAATCATGCCACAAAATGAA+TGG - chr7.4:5159402-5159421 None:intergenic 35.0%
GAGTGTCAAAATTACTTTGG+AGG - chr7.4:5160834-5160853 None:intergenic 35.0%
GCAGATTTCAGTACACATAT+GGG - chr7.4:5159112-5159131 None:intergenic 35.0%
GGAAATACTGAGAGAGATAA+TGG + chr7.4:5161183-5161202 MS.gene050825:intron 35.0%
GGTTTCATGTTGGATTGTAT+TGG + chr7.4:5162305-5162324 MS.gene050825:intron 35.0%
GTATCATGTTGAATGGCATT+GGG + chr7.4:5162483-5162502 MS.gene050825:intron 35.0%
GTGTTTGGTATCATGTTGAA+TGG + chr7.4:5162476-5162495 MS.gene050825:intron 35.0%
GTTGGATTACTCTATTATCC+TGG + chr7.4:5159474-5159493 MS.gene050825:intron 35.0%
GTTGGTTAAACTAGAAGCTA+TGG - chr7.4:5160666-5160685 None:intergenic 35.0%
TAAGGCCATTACAACTCTTT+GGG + chr7.4:5161578-5161597 MS.gene050825:intron 35.0%
TAAGGTAAATGTCAACCTTG+TGG - chr7.4:5162818-5162837 None:intergenic 35.0%
TAGGAATATCATCACTGCAA+AGG - chr7.4:5162904-5162923 None:intergenic 35.0%
TATATACCACAAACACCAGT+TGG - chr7.4:5160684-5160703 None:intergenic 35.0%
TCATGCATACCATGTTGTTA+AGG - chr7.4:5161076-5161095 None:intergenic 35.0%
TCCAATATGGAAAACCTTGT+TGG - chr7.4:5159857-5159876 None:intergenic 35.0%
TCTAAAGACACAACTTCTGA+TGG - chr7.4:5158978-5158997 None:intergenic 35.0%
TGTAGAACTGATATATCTGG+GGG + chr7.4:5160146-5160165 MS.gene050825:intron 35.0%
TGTTTGTCAGTATGTTTGGA+TGG + chr7.4:5158730-5158749 MS.gene050825:intron 35.0%
TTGCTCAATAATCCAGTGAA+TGG - chr7.4:5159046-5159065 None:intergenic 35.0%
TTTAGAAAAACTACTCGACG+CGG + chr7.4:5158992-5159011 MS.gene050825:CDS 35.0%
! AAATAATGGAAGGAAGGGTA+AGG - chr7.4:5162836-5162855 None:intergenic 35.0%
! AAATCAATTACTGATGGACG+TGG - chr7.4:5162360-5162379 None:intergenic 35.0%
! ACTTTGGAGGATCTGAATTT+GGG - chr7.4:5160821-5160840 None:intergenic 35.0%
! AGGTGGTTAAGACAACTTTT+TGG - chr7.4:5160363-5160382 None:intergenic 35.0%
! ATGGGAAATAATGGAAGGAA+GGG - chr7.4:5162841-5162860 None:intergenic 35.0%
! ATGTACATTTTTCTTGTGGC+AGG + chr7.4:5159584-5159603 MS.gene050825:intron 35.0%
! ATTCATGGAGCTGATTCAAA+AGG + chr7.4:5158355-5158374 MS.gene050825:CDS 35.0%
! ATTTTCGTGCTTTACAGTGT+TGG + chr7.4:5162766-5162785 MS.gene050825:intron 35.0%
! CAAACATGATTTGTATGACC+AGG - chr7.4:5159495-5159514 None:intergenic 35.0%
! CCAATTTTCCGAAATAGAAG+AGG - chr7.4:5161165-5161184 None:intergenic 35.0%
! TACTTTGGAGGATCTGAATT+TGG - chr7.4:5160822-5160841 None:intergenic 35.0%
! TCATGTGTTTGGTTTCATGT+TGG + chr7.4:5162295-5162314 MS.gene050825:intron 35.0%
! TTGAAAACTTTTCTTCAGGG+AGG + chr7.4:5158938-5158957 MS.gene050825:intron 35.0%
! TTTTCAACGACTTCTCAATC+CGG + chr7.4:5160975-5160994 MS.gene050825:CDS 35.0%
!! ATTAGTCTTTGCTAGTATGG+AGG + chr7.4:5159661-5159680 MS.gene050825:intron 35.0%
!! TAGCTTCTAGTTTAACCAAC+TGG + chr7.4:5160666-5160685 MS.gene050825:intron 35.0%
!! TCAGTAATTGATTTGGTGTG+TGG + chr7.4:5162366-5162385 MS.gene050825:intron 35.0%
!! TTGTTTTGCTCATTGCCAAT+CGG + chr7.4:5161013-5161032 MS.gene050825:CDS 35.0%
!!! AGTATTTTGATCATGGGTCT+CGG + chr7.4:5158832-5158851 MS.gene050825:intron 35.0%
!!! TGCGCACAGATTTTTTTAAC+TGG + chr7.4:5159168-5159187 MS.gene050825:intron 35.0%
AAATGAGACGATGTAGGCAT+TGG - chr7.4:5162682-5162701 None:intergenic 40.0%
AAGTTTACAGGCAATGATGC+AGG - chr7.4:5160099-5160118 None:intergenic 40.0%
AATCGGAGAGACAAGATACA+TGG + chr7.4:5161030-5161049 MS.gene050825:CDS 40.0%
ACATTGAGGAATCTCTTTGG+AGG + chr7.4:5160173-5160192 MS.gene050825:CDS 40.0%
AGGGATCATGATACAATAGG+GGG - chr7.4:5162156-5162175 None:intergenic 40.0%
AGGGTAAAAGGGAAAAAACC+AGG - chr7.4:5159085-5159104 None:intergenic 40.0%
AGGTTGAAGTTGAACTACTG+TGG + chr7.4:5162079-5162098 MS.gene050825:intron 40.0%
AGTTTCACGTAAAGTAGACG+AGG - chr7.4:5162649-5162668 None:intergenic 40.0%
ATATGGGTGGAAGGGTAAAA+GGG - chr7.4:5159096-5159115 None:intergenic 40.0%
ATGTATCTTGTCTCTCCGAT+TGG - chr7.4:5161031-5161050 None:intergenic 40.0%
ATTGGTAGAACTCCGTGAAA+GGG + chr7.4:5161929-5161948 MS.gene050825:intron 40.0%
CACACATTGAGGAATCTCTT+TGG + chr7.4:5160170-5160189 MS.gene050825:CDS 40.0%
CACTGGATAGTTAAGAGAGT+TGG + chr7.4:5162452-5162471 MS.gene050825:intron 40.0%
CATACCATGTTGTTAAGGAG+GGG - chr7.4:5161071-5161090 None:intergenic 40.0%
CATCATGGAATTGCGAAGAT+GGG - chr7.4:5162859-5162878 None:intergenic 40.0%
CGCAGATTTCAGTACACATA+TGG - chr7.4:5159113-5159132 None:intergenic 40.0%
CGTCTACTTTACGTGAAACT+TGG + chr7.4:5162649-5162668 MS.gene050825:intron 40.0%
CTAAGGCCATTACAACTCTT+TGG + chr7.4:5161577-5161596 MS.gene050825:intron 40.0%
CTCACTTGAAGACCAGATTA+TGG - chr7.4:5161452-5161471 None:intergenic 40.0%
GAAAACACAAGTACTCTCTC+CGG - chr7.4:5162053-5162072 None:intergenic 40.0%
GAAACAGCGGATAGTTAAAG+AGG + chr7.4:5162272-5162291 MS.gene050825:intron 40.0%
GAACGTATATCATCTGCCAA+TGG - chr7.4:5158286-5158305 None:intergenic 40.0%
GAATATCATCACTGCAAAGG+AGG - chr7.4:5162901-5162920 None:intergenic 40.0%
GAGAGCTTTCATCATAGCAA+AGG - chr7.4:5161238-5161257 None:intergenic 40.0%
GATTTCAGTACACATATGGG+TGG - chr7.4:5159109-5159128 None:intergenic 40.0%
GCAATGAAATCTTCTGTCAG+TGG + chr7.4:5160255-5160274 MS.gene050825:intron 40.0%
GCATACCATGTTGTTAAGGA+GGG - chr7.4:5161072-5161091 None:intergenic 40.0%
GGACAGAAATCATGAAACAG+CGG + chr7.4:5162259-5162278 MS.gene050825:intron 40.0%
GGTATCATGTTGAATGGCAT+TGG + chr7.4:5162482-5162501 MS.gene050825:intron 40.0%
GTAGAACTGATATATCTGGG+GGG + chr7.4:5160147-5160166 MS.gene050825:intron 40.0%
GTGAAATGTTTGAGTGATGC+TGG + chr7.4:5160024-5160043 MS.gene050825:CDS 40.0%
GTTGAGTGACTTGAATGGAT+AGG + chr7.4:5162396-5162415 MS.gene050825:intron 40.0%
GTTTAACCAACTGGTGTTTG+TGG + chr7.4:5160675-5160694 MS.gene050825:intron 40.0%
TGAATGCAGCTTATGATGCA+TGG + chr7.4:5160536-5160555 MS.gene050825:CDS 40.0%
TGACAATACCTGCCATAATC+TGG + chr7.4:5161437-5161456 MS.gene050825:CDS 40.0%
TGCATACCATGTTGTTAAGG+AGG - chr7.4:5161073-5161092 None:intergenic 40.0%
TGCATCATTGCCTGTAAACT+TGG + chr7.4:5160098-5160117 MS.gene050825:intron 40.0%
TGTCTTCACTATTCATGGTG+TGG + chr7.4:5158648-5158667 MS.gene050825:intron 40.0%
TGTGAATTCATACCCCTTTC+AGG + chr7.4:5159753-5159772 MS.gene050825:intron 40.0%
TGTTTGGATGGAACTTTACC+TGG + chr7.4:5158742-5158761 MS.gene050825:CDS 40.0%
! AAAACTTTTCTTCAGGGAGG+AGG + chr7.4:5158941-5158960 MS.gene050825:intron 40.0%
! ATGTTGAATGGCATTGGGTT+TGG + chr7.4:5162488-5162507 MS.gene050825:intron 40.0%
! ATTATGGCAGGTATTGTCAC+AGG - chr7.4:5161436-5161455 None:intergenic 40.0%
! CGAAGATGGGAAATAATGGA+AGG - chr7.4:5162846-5162865 None:intergenic 40.0%
! GATGGGAAATAATGGAAGGA+AGG - chr7.4:5162842-5162861 None:intergenic 40.0%
! GCCAACAAGGTTTTCCATAT+TGG + chr7.4:5159853-5159872 MS.gene050825:intron 40.0%
! TAGTTGGCTCATTCAATTGG+AGG + chr7.4:5158801-5158820 MS.gene050825:CDS 40.0%
! TCTTTTATCTGGATGCTCTG+CGG + chr7.4:5159939-5159958 MS.gene050825:CDS 40.0%
! TGAATGGGCTCTTCTTAAGA+AGG + chr7.4:5159699-5159718 MS.gene050825:intron 40.0%
! TGTTGAATGGCATTGGGTTT+GGG + chr7.4:5162489-5162508 MS.gene050825:intron 40.0%
! TTATGGCAGGTATTGTCACA+GGG - chr7.4:5161435-5161454 None:intergenic 40.0%
! TTTGTTTCCTCGAAGTGCTA+TGG + chr7.4:5160632-5160651 MS.gene050825:intron 40.0%
! TTTTTCTTGTGGCAGGAAGA+AGG + chr7.4:5159591-5159610 MS.gene050825:intron 40.0%
!! GTTAAGAGAGTTGGTGTGTT+TGG + chr7.4:5162461-5162480 MS.gene050825:intron 40.0%
!! TCAAAGTGAGGTACTGTGAT+GGG + chr7.4:5159198-5159217 MS.gene050825:CDS 40.0%
!!! ACTCCGTGAAAGGGTATTTT+TGG + chr7.4:5161938-5161957 MS.gene050825:intron 40.0%
!!! GAGAGAGTACTTGTGTTTTC+GGG + chr7.4:5162053-5162072 MS.gene050825:intron 40.0%
!!! GGAGAGAGTACTTGTGTTTT+CGG + chr7.4:5162052-5162071 MS.gene050825:intron 40.0%
AAATTACCGAAGTTGGGTCC+AGG - chr7.4:5160383-5160402 None:intergenic 45.0%
ACGAGGTCAGTGAGATAGTA+TGG + chr7.4:5159246-5159265 MS.gene050825:intron 45.0%
ACGCGGTTCCTCAAAATACA+TGG + chr7.4:5159009-5159028 MS.gene050825:CDS 45.0%
ACGTGGATGGATGTATTCAG+AGG - chr7.4:5162343-5162362 None:intergenic 45.0%
ACTGGAACAGAGTCAAAGTG+AGG + chr7.4:5159186-5159205 MS.gene050825:CDS 45.0%
AGACACAGAATCTCTCACCT+CGG + chr7.4:5158230-5158249 MS.gene050825:CDS 45.0%
ATCCATACCATAGCACTTCG+AGG - chr7.4:5160642-5160661 None:intergenic 45.0%
ATCCCACTCACTCTCATTCA+TGG + chr7.4:5158340-5158359 MS.gene050825:CDS 45.0%
ATTTGCACCAGATCCAGATC+CGG - chr7.4:5158782-5158801 None:intergenic 45.0%
CAGTACACATATGGGTGGAA+GGG - chr7.4:5159104-5159123 None:intergenic 45.0%
CATATGGGTGGAAGGGTAAA+AGG - chr7.4:5159097-5159116 None:intergenic 45.0%
CATTGGTAGAACTCCGTGAA+AGG + chr7.4:5161928-5161947 MS.gene050825:intron 45.0%
CCATCATGGAATTGCGAAGA+TGG - chr7.4:5162860-5162879 None:intergenic 45.0%
CCATCTTCGCAATTCCATGA+TGG + chr7.4:5162857-5162876 MS.gene050825:intron 45.0%
CTCCATGAATGAGAGTGAGT+GGG - chr7.4:5158345-5158364 None:intergenic 45.0%
CTGGATCTGGTGCAAATAGT+TGG + chr7.4:5158785-5158804 MS.gene050825:CDS 45.0%
CTTGAAGACCAGATTATGGC+AGG - chr7.4:5161448-5161467 None:intergenic 45.0%
GAACTTCTGGCCCGAATATT+GGG - chr7.4:5162195-5162214 None:intergenic 45.0%
GATCTCGTGAGATCTAACTG+AGG - chr7.4:5158206-5158225 None:intergenic 45.0%
GCTATATTCCCGCTCTACAA+GGG + chr7.4:5162931-5162950 MS.gene050825:CDS 45.0%
GCTGCACAGCTTCAATTTAG+AGG + chr7.4:5159775-5159794 MS.gene050825:CDS 45.0%
TCAGTACACATATGGGTGGA+AGG - chr7.4:5159105-5159124 None:intergenic 45.0%
TGCTATATTCCCGCTCTACA+AGG + chr7.4:5162930-5162949 MS.gene050825:CDS 45.0%
TGGGGTCTGGATAATTTGGT+GGG + chr7.4:5162508-5162527 MS.gene050825:intron 45.0%
TGGTAGACTCTCAATCCACA+AGG + chr7.4:5162800-5162819 MS.gene050825:CDS 45.0%
TGTAGAGCGGGAATATAGCA+TGG - chr7.4:5162930-5162949 None:intergenic 45.0%
TTGCGATTGCCGTTGGAAAT+TGG + chr7.4:5161367-5161386 MS.gene050825:CDS 45.0%
TTGGGGTCTGGATAATTTGG+TGG + chr7.4:5162507-5162526 MS.gene050825:intron 45.0%
TTTCCAACGGCAATCGCAAT+TGG - chr7.4:5161366-5161385 None:intergenic 45.0%
TTTCCTTTCCAACACCACGT+AGG + chr7.4:5162230-5162249 MS.gene050825:intron 45.0%
! CAATTACTGATGGACGTGGA+TGG - chr7.4:5162356-5162375 None:intergenic 45.0%
! CGATGTCGTTTCAGTTCCAT+TGG + chr7.4:5158267-5158286 MS.gene050825:CDS 45.0%
! CTTTTATCTGGATGCTCTGC+GGG + chr7.4:5159940-5159959 MS.gene050825:CDS 45.0%
! GGTTTGGGGTCTGGATAATT+TGG + chr7.4:5162504-5162523 MS.gene050825:intron 45.0%
! GTTGAATGGCATTGGGTTTG+GGG + chr7.4:5162490-5162509 MS.gene050825:intron 45.0%
! TATGGCAGGTATTGTCACAG+GGG - chr7.4:5161434-5161453 None:intergenic 45.0%
! TCGTTTTCCAAGATATCCCG+AGG - chr7.4:5158250-5158269 None:intergenic 45.0%
! TGGAGGTGTAGTTAGCTTAC+AGG + chr7.4:5160190-5160209 MS.gene050825:CDS 45.0%
! TGTGGATTGAGAGTCTACCA+TGG - chr7.4:5162800-5162819 None:intergenic 45.0%
! TTCCTCGAAGTGCTATGGTA+TGG + chr7.4:5160637-5160656 MS.gene050825:intron 45.0%
!! AAGGAAAGCAGTGGACTACT+CGG - chr7.4:5162217-5162236 None:intergenic 45.0%
!! CAAAGTGAGGTACTGTGATG+GGG + chr7.4:5159199-5159218 MS.gene050825:CDS 45.0%
!! CAGTGTTGGTAAATCTGCCA+TGG + chr7.4:5162780-5162799 MS.gene050825:intron 45.0%
!! GTACTTGTGTTTTCGGGCTT+AGG + chr7.4:5162059-5162078 MS.gene050825:intron 45.0%
!! GTCAAAGTGAGGTACTGTGA+TGG + chr7.4:5159197-5159216 MS.gene050825:CDS 45.0%
!! TGTGTGTGTGCGCTTTGTTT+AGG + chr7.4:5158617-5158636 MS.gene050825:intron 45.0%
AATGCGGGGCTAGACTTTCT+TGG - chr7.4:5160738-5160757 None:intergenic 50.0%
ACCACCCTTCAGGCATAGAA+TGG - chr7.4:5161728-5161747 None:intergenic 50.0%
AGAGCGGGAATATAGCATGG+AGG - chr7.4:5162927-5162946 None:intergenic 50.0%
AGAGTGAGTGGGATCATGAG+AGG - chr7.4:5158334-5158353 None:intergenic 50.0%
AGGCATAGAATGGGGTCCTT+GGG - chr7.4:5161718-5161737 None:intergenic 50.0%
AGTGGGATCATGAGAGGTTG+AGG - chr7.4:5158328-5158347 None:intergenic 50.0%
ATGAGGATCTGCTGAATGCG+GGG - chr7.4:5160752-5160771 None:intergenic 50.0%
CACCCTTCAGGCATAGAATG+GGG - chr7.4:5161726-5161745 None:intergenic 50.0%
CAGCAGATCCTCATGGATCT+TGG + chr7.4:5160758-5160777 MS.gene050825:CDS 50.0%
CAGTGGAGACAGTCAAAACG+AGG + chr7.4:5159229-5159248 MS.gene050825:CDS 50.0%
CATGAGGATCTGCTGAATGC+GGG - chr7.4:5160753-5160772 None:intergenic 50.0%
CCAACACCACGTAGGTGATT+CGG + chr7.4:5162238-5162257 MS.gene050825:intron 50.0%
CCACCCTTCAGGCATAGAAT+GGG - chr7.4:5161727-5161746 None:intergenic 50.0%
CCATGAGGATCTGCTGAATG+CGG - chr7.4:5160754-5160773 None:intergenic 50.0%
CGGGAATATAGCATGGAGGT+AGG - chr7.4:5162923-5162942 None:intergenic 50.0%
CTCTCCCCTCCTTAACAACA+TGG + chr7.4:5161064-5161083 MS.gene050825:CDS 50.0%
GACACAGAATCTCTCACCTC+GGG + chr7.4:5158231-5158250 MS.gene050825:CDS 50.0%
GACCCCATTCTATGCCTGAA+GGG + chr7.4:5161721-5161740 MS.gene050825:intron 50.0%
GCTCCATGAATGAGAGTGAG+TGG - chr7.4:5158346-5158365 None:intergenic 50.0%
GCTGCATTCAGCAGAAACAG+TGG - chr7.4:5160526-5160545 None:intergenic 50.0%
GGAACTTCTGGCCCGAATAT+TGG - chr7.4:5162196-5162215 None:intergenic 50.0%
GGGAATGAAGAACGCCAACA+AGG + chr7.4:5159840-5159859 MS.gene050825:CDS 50.0%
GGTGGGGAGAGGTAAAACTA+TGG + chr7.4:5159449-5159468 MS.gene050825:intron 50.0%
TAACCACCTGGACCCAACTT+CGG + chr7.4:5160374-5160393 MS.gene050825:CDS 50.0%
TCTCTCACCTCGGGATATCT+TGG + chr7.4:5158240-5158259 MS.gene050825:CDS 50.0%
TGAAGCTGTGCAGCCTGAAA+GGG - chr7.4:5159769-5159788 None:intergenic 50.0%
TGCAGCTTATGATGCATGGC+AGG + chr7.4:5160540-5160559 MS.gene050825:CDS 50.0%
TTCTGTCCGAATCACCTACG+TGG - chr7.4:5162247-5162266 None:intergenic 50.0%
TTGAAGCTGTGCAGCCTGAA+AGG - chr7.4:5159770-5159789 None:intergenic 50.0%
TTTGCACCAGATCCAGATCC+GGG - chr7.4:5158781-5158800 None:intergenic 50.0%
! CTTTTCTTCAGGGAGGAGGA+TGG + chr7.4:5158945-5158964 MS.gene050825:intron 50.0%
! GGAGCTGATTCAAAAGGAGC+AGG + chr7.4:5158361-5158380 MS.gene050825:CDS 50.0%
! GGTGTTGGAAAGGAAAGCAG+TGG - chr7.4:5162226-5162245 None:intergenic 50.0%
! TCACCTACGTGGTGTTGGAA+AGG - chr7.4:5162236-5162255 None:intergenic 50.0%
!! AAAAGAAGGCACCACCCTTC+AGG - chr7.4:5161738-5161757 None:intergenic 50.0%
!! AGTGGACTACTCGGAACTTC+TGG - chr7.4:5162208-5162227 None:intergenic 50.0%
ATCCAGATCCGGGATGGAAG+TGG - chr7.4:5158771-5158790 None:intergenic 55.0%
ATGAGAGGTTGAGGCAGCAG+GGG - chr7.4:5158319-5158338 None:intergenic 55.0%
ATTACCTCACGCAGCCTGCT+GGG + chr7.4:5159427-5159446 MS.gene050825:intron 55.0%
CAGCCAATTGCGATTGCCGT+TGG + chr7.4:5161360-5161379 MS.gene050825:intron 55.0%
CAGGCAATGATGCAGGCTAG+AGG - chr7.4:5160092-5160111 None:intergenic 55.0%
CAGGCATAGAATGGGGTCCT+TGG - chr7.4:5161719-5161738 None:intergenic 55.0%
CATGAGAGGTTGAGGCAGCA+GGG - chr7.4:5158320-5158339 None:intergenic 55.0%
CCCATTCTATGCCTGAAGGG+TGG + chr7.4:5161724-5161743 MS.gene050825:intron 55.0%
CCGAATCACCTACGTGGTGT+TGG - chr7.4:5162241-5162260 None:intergenic 55.0%
CCGCATTCAGCAGATCCTCA+TGG + chr7.4:5160751-5160770 MS.gene050825:CDS 55.0%
CCTGGTTACCACTTCCATCC+CGG + chr7.4:5158760-5158779 MS.gene050825:CDS 55.0%
GAAGCTGTGCAGCCTGAAAG+GGG - chr7.4:5159768-5159787 None:intergenic 55.0%
GGACCCCATTCTATGCCTGA+AGG + chr7.4:5161720-5161739 MS.gene050825:intron 55.0%
TACCACTTCCATCCCGGATC+TGG + chr7.4:5158766-5158785 MS.gene050825:CDS 55.0%
TATTACCTCACGCAGCCTGC+TGG + chr7.4:5159426-5159445 MS.gene050825:intron 55.0%
TCATGAGAGGTTGAGGCAGC+AGG - chr7.4:5158321-5158340 None:intergenic 55.0%
TTACCGAAGTTGGGTCCAGG+TGG - chr7.4:5160380-5160399 None:intergenic 55.0%
TTATCTGGATGCTCTGCGGG+TGG + chr7.4:5159943-5159962 MS.gene050825:CDS 55.0%
TTCCATCCCGGATCTGGATC+TGG + chr7.4:5158772-5158791 MS.gene050825:CDS 55.0%
! ATGGCATTGGGTTTGGGGTC+TGG + chr7.4:5162495-5162514 MS.gene050825:intron 55.0%
! TATCTGGGGGGCACACATTG+AGG + chr7.4:5160159-5160178 MS.gene050825:CDS 55.0%
! TGTGATGGGGCGTCTTTCAG+TGG + chr7.4:5159212-5159231 MS.gene050825:CDS 55.0%
CACCAGATCCAGATCCGGGA+TGG - chr7.4:5158777-5158796 None:intergenic 60.0%
CCGGGATGGAAGTGGTAACC+AGG - chr7.4:5158763-5158782 None:intergenic 60.0%
TTACCTCACGCAGCCTGCTG+GGG + chr7.4:5159428-5159447 MS.gene050825:intron 60.0%
AGGTTGAGGCAGCAGGGGAG+AGG - chr7.4:5158314-5158333 None:intergenic 65.0%
TGGATGCTCTGCGGGTGGTC+TGG + chr7.4:5159948-5159967 MS.gene050825:CDS 65.0%
TTACCTCTCCCCACCCCAGC+AGG - chr7.4:5159444-5159463 None:intergenic 65.0%
CTCACGCAGCCTGCTGGGGT+GGG + chr7.4:5159432-5159451 MS.gene050825:intron 70.0%
TCACGCAGCCTGCTGGGGTG+GGG + chr7.4:5159433-5159452 MS.gene050825:intron 70.0%
CAGCCTGCTGGGGTGGGGAG+AGG + chr7.4:5159438-5159457 MS.gene050825:intron 75.0%
CCACCCCAGCAGGCTGCGTG+AGG - chr7.4:5159434-5159453 None:intergenic 75.0%
CCTCACGCAGCCTGCTGGGG+TGG + chr7.4:5159431-5159450 MS.gene050825:intron 75.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 5158145 5162951 5158145 ID=MS.gene050825
chr7.4 mRNA 5158145 5162951 5158145 ID=MS.gene050825.t1;Parent=MS.gene050825
chr7.4 exon 5158145 5158382 5158145 ID=MS.gene050825.t1.exon1;Parent=MS.gene050825.t1
chr7.4 CDS 5158145 5158382 5158145 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5158740 5158822 5158740 ID=MS.gene050825.t1.exon2;Parent=MS.gene050825.t1
chr7.4 CDS 5158740 5158822 5158740 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5158956 5159085 5158956 ID=MS.gene050825.t1.exon3;Parent=MS.gene050825.t1
chr7.4 CDS 5158956 5159085 5158956 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5159177 5159250 5159177 ID=MS.gene050825.t1.exon4;Parent=MS.gene050825.t1
chr7.4 CDS 5159177 5159250 5159177 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5159775 5159861 5159775 ID=MS.gene050825.t1.exon5;Parent=MS.gene050825.t1
chr7.4 CDS 5159775 5159861 5159775 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5159937 5160061 5159937 ID=MS.gene050825.t1.exon6;Parent=MS.gene050825.t1
chr7.4 CDS 5159937 5160061 5159937 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5160151 5160211 5160151 ID=MS.gene050825.t1.exon7;Parent=MS.gene050825.t1
chr7.4 CDS 5160151 5160211 5160151 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5160342 5160395 5160342 ID=MS.gene050825.t1.exon8;Parent=MS.gene050825.t1
chr7.4 CDS 5160342 5160395 5160342 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5160484 5160561 5160484 ID=MS.gene050825.t1.exon9;Parent=MS.gene050825.t1
chr7.4 CDS 5160484 5160561 5160484 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5160733 5160838 5160733 ID=MS.gene050825.t1.exon10;Parent=MS.gene050825.t1
chr7.4 CDS 5160733 5160838 5160733 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5160940 5161085 5160940 ID=MS.gene050825.t1.exon11;Parent=MS.gene050825.t1
chr7.4 CDS 5160940 5161085 5160940 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5161363 5161466 5161363 ID=MS.gene050825.t1.exon12;Parent=MS.gene050825.t1
chr7.4 CDS 5161363 5161466 5161363 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5162783 5162821 5162783 ID=MS.gene050825.t1.exon13;Parent=MS.gene050825.t1
chr7.4 CDS 5162783 5162821 5162783 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
chr7.4 exon 5162910 5162951 5162910 ID=MS.gene050825.t1.exon14;Parent=MS.gene050825.t1
chr7.4 CDS 5162910 5162951 5162910 ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1
Gene Sequence

>MS.gene050825

ATGAGAAGAATGGATATTATTCTGATAATAACAATAGTAACGTTTTTCTTTGTTATCTCCTCAGTTAGATCTCACGAGATCACTCAGACACAGAATCTCTCACCTCGGGATATCTTGGAAAACGATGTCGTTTCAGTTCCATTGGCAGATGATATACGTTCATCATCCTCTCCCCTGCTGCCTCAACCTCTCATGATCCCACTCACTCTCATTCATGGAGCTGATTCAAAAGGAGCAGGTTTCTCTCTTACTCTCATTACTCAATATATGTAACATATTGAGACTCTGTTTCGATTCACTTATTTAAACTTTTATCGACTAACATAAGCACTTTTGAGATTGTTTGATAGAGATTACCAAAAAAACTTATGATGATATGTGCATAAATTGTTATCAGTAGCTTATTTTCATAAGGTCTGGATATATAGTAGTTAAAACTGACACAATACATATTACATAGTGTGTGTGTGTGTGTGTGTGTGCGCTTTGTTTAGGTTATTTCATGTCTTCACTATTCATGGTGTGGTAGAACCTAGTATTTTGTCTCAAATGGATATCACTGAGCTTTATGTTTTTGTTCAATAATGTTTGTCAGTATGTTTGGATGGAACTTTACCTGGTTACCACTTCCATCCCGGATCTGGATCTGGTGCAAATAGTTGGCTCATTCAATTGGAGGTATGTTCAAGTATTTTGATCATGGGTCTCGGTTACAATAGTTTCATCGTTTCACAATATCATAAATTTTGAAGACTTTATGAAACTACTATACTATTTTGTTATGTAAACCTGTTTGAAAACTTTTCTTCAGGGAGGAGGATGGTGTAATACCATCAGAAGTTGTGTCTTTAGAAAAACTACTCGACGCGGTTCCTCAAAATACATGGAAAAACAACTACCATTCACTGGATTATTGAGCAATAAAGCTGAAGAAAATCCTGGTTTTTTCCCTTTTACCCTTCCACCCATATGTGTACTGAAATCTGCGAGTTATGTGTTATAATTTTTGTGGACATCATCTCTTGCGCACAGATTTTTTTAACTGGAACAGAGTCAAAGTGAGGTACTGTGATGGGGCGTCTTTCAGTGGAGACAGTCAAAACGAGGTCAGTGAGATAGTATGGCAACACTTTTTATTTTTCCAATTTTTGTTAAGAGGATTTTTTTTTCCTATTATTATCATTGACATACATCATGTCGATTAGTAACTACTTAGTTAAATTATTCTTTGGAAATTTGTGGCTGCAAAAAACACCATTCATTTTGTGGCATGATTCAAAATATTACCTCACGCAGCCTGCTGGGGTGGGGAGAGGTAAAACTATGGTTGTTGGATTACTCTATTATCCTGGTCATACAAATCATGTTTGCATCGTATATGATCAACTTCTGCAGTACAATGATTCATAAATTTGAAAGTATATATACAGACATAGCAAATGTACATTTTTCTTGTGGCAGGAAGAAGGCATTAAAGCTTGACAAATATGAGATAAACATATCTATTAGTTTTTTTATTAGTCTTTGCTAGTATGGAGGAAATCTCTTTTCTAATGAATGGGCTCTTCTTAAGAAGGATTCTTTCTATATTTATGATTCCAATTGACTTGTGAATTCATACCCCTTTCAGGCTGCACAGCTTCAATTTAGAGGACAGAAAATATGGCTAGCTGCAATTGAAGAATTAATGTCGAAGGGAATGAAGAACGCCAACAAGGTTTTCCATATTGGAATGTCGTAATTTTTTATTCAATCATAGATGTCCATGGATGCTAATGATTTTTTTTTTCAGGCTCTTTTATCTGGATGCTCTGCGGGTGGTCTGGCATCTATACTACATTGCGATGAGTTCCAAAGCTTGTTTCCAAAATCTACCAAAGTGAAATGTTTGAGTGATGCTGGATTTTTTCTTGATGCGTAAGTAATATATTTTGTTTCATACGACCTCTAGCCTGCATCATTGCCTGTAAACTTGGATATAATTGTTTAACTGTTCAATCATGTAGAACTGATATATCTGGGGGGCACACATTGAGGAATCTCTTTGGAGGTGTAGTTAGCTTACAGGTAATATTTACTTTAATGTAATAGTCAAAGATTGTATAAGCTTGCAATGAAATCTTCTGTCAGTGGTTTTACCTTTCTGTTAGAAAACTTGTATAAATATGTAACTTGATTGACGTCTTTGAAATTGTAGGAAGTGCAAAAAAATCTACCAAAAAGTTGTCTTAACCACCTGGACCCAACTTCGGTAATTTTCTGATTCTTGACGTGATTCTATTCATAGCTTGAAATCGCTAGATTTGCAAATTTTAAGCATATAAACTCTATTTTTTCAGTGCTTCTTTCCTCAAAATTTGATCGATCATGTTCAGACTCCACTGTTTCTGCTGAATGCAGCTTATGATGCATGGCAGGTAATATTTATAAATACTCACTTTCTTGTAGTTTTCTGTTAATGATATATGCTATGCTTACTAACGTGTCTTTGTTTCCTCGAAGTGCTATGGTATGGATGCCATAGCTTCTAGTTTAACCAACTGGTGTTTGTGGTATATAGACTAATCTCTTGAAATTGTTTTATTTAGTTCCAAGAAAGTCTAGCCCCGCATTCAGCAGATCCTCATGGATCTTGGAATAATTGTAAATCAAATCATGCAAATTGTAATTCATCCCAAATTCAGATCCTCCAAAGTAATTTTGACACTCTCTACTAATGTGTAAACTATGCATAGCAATTGATGTATATCTATAAATATCTGAGTTACTTGCAATGCATTTCTTCTTTTAATCAGACTTCAGAAATCAAATGCTAAATGACATCAAAGGATTTTCAACGACTTCTCAATCCGGATTATTCATAAATTCTTGTTTTGCTCATTGCCAATCGGAGAGACAAGATACATGGTTTGCTGATGACTCTCCCCTCCTTAACAACATGGTATGCATGAATGAAGATTTCCGTGCTTCTAAAATAGTACAGTTGGAACAACATGTTTAATTTGTTTAAATCTTTTCCTCTTCTATTTCGGAAAATTGGAAATACTGAGAGAGATAATGGATAGAGACTAAAAATTATTTGTGGTAAAACCTTTGCTATGATGAAAGCTCTCAACGATTAGAACATAACAAGACTACTCAAGTTTCATTCCTCTCCCTTTCTTTTTATTGTTCTCAGAAAATAATCATCTGATGATGTAATATATTTTATAATGCAGCCAATTGCGATTGCCGTTGGAAATTGGTTTTTTGATCGTCAAGTTGTCAAAGCTATTGATTGTGCTTACCCCTGTGACAATACCTGCCATAATCTGGTCTTCAAGTGAGTCAAAGTTATTGTCTTTCGTACGGTAATTGTTATTCACAATTTGATCATTGTGATAGCCATTTGTGAATTTATCATTCTTAATTGTTATAGAAAAACATTATTGGCTAAGGCCATTACAACTCTTTGGGTCTATTATATTCACTTATAGGTTGCTTTAATAAAATTTCTTTGGATTGAAAATCCAAAATTACTGAGTCTGCATTACCCTTGAAGATATTATACTTTTATCCAATTATAATTTTCCCAAGGACCCCATTCTATGCCTGAAGGGTGGTGCCTTCTTTTTAATTGCACCACTTTTCAAGTTAATAAAATGATAGATTGGCATCTAAAAAATTAGAGTCAATCTAGATTTCATAAGGTAGCTGATTTGAGTTCTGAAACTTGCTCTTTTATTATTGTTATGATAAATTTCAATGATAGACCTTTTATCGATCATTTGAGTCATTACAATTCATTGGTAGAACTCCGTGAAAGGGTATTTTTGGAATGATTACATTTGAAATGGTGAAGTTAGTTGAAATTTGTTTATATTTCAATCTATCAAATATGATTTGGCTTTTGTTTATATTTGAGTCCGGAGAGAGTACTTGTGTTTTCGGGCTTAGGTTGAAGTTGAACTACTGTGGTATGTGTACTGAAAGCATGATGATTTAAATGTGAAATTTCAATGGCTTGCGCCCCCTATTGTATCATGATCCCTTAAATCTTAAAATCAACCCAATATTCGGGCCAGAAGTTCCGAGTAGTCCACTGCTTTCCTTTCCAACACCACGTAGGTGATTCGGACAGAAATCATGAAACAGCGGATAGTTAAAGAGGTCATGTGTTTGGTTTCATGTTGGATTGTATTGGAATAGGTTGTCTCCTCTGAATACATCCATCCACGTCCATCAGTAATTGATTTGGTGTGTGGATAATTTGTTGAGTGACTTGAATGGATAGGCTCAGATATCGTCTTAAGTTCATCCTTATAGAACACTGGATAGTTAAGAGAGTTGGTGTGTTTGGTATCATGTTGAATGGCATTGGGTTTGGGGTCTGGATAATTTGGTGGGTGACTCGAATAGATAGTCTCATATACCATCTTAAGTTGTGATATTAGGCTAAATTCATCATTACAAAACTGGCTTGTAAGATGAAAATTGTCATTCTTTATGAACTCTTTTCAGACCTCGTCTACTTTACGTGAAACTTGGACTTTTTCCAATGCCTACATCGTCTCATTTTAAGAATACCAGAAATTTCACCTTCTTTCTTTTCTCTAATTCACACTATGACACTGAGATTCATATTTTCGTGCTTTACAGTGTTGGTAAATCTGCCATGGTAGACTCTCAATCCACAAGGTTGACATTTACCTTACCCTTCCTTCCATTATTTCCCATCTTCGCAATTCCATGATGGAACTAAAATTCTTATATTCCTCCTTTGCAGTGATGATATTCCTACCTCCATGCTATATTCCCGCTCTACAAG

Protein sequence

>MS.gene050825.t1

MRRMDIILIITIVTFFFVISSVRSHEITQTQNLSPRDILENDVVSVPLADDIRSSSSPLLPQPLMIPLTLIHGADSKGAVCLDGTLPGYHFHPGSGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSKYMEKQLPFTGLLSNKAEENPDFFNWNRVKVRYCDGASFSGDSQNEAAQLQFRGQKIWLAAIEELMSKGMKNANKALLSGCSAGGLASILHCDEFQSLFPKSTKVKCLSDAGFFLDATDISGGHTLRNLFGGVVSLQEVQKNLPKSCLNHLDPTSCFFPQNLIDHVQTPLFLLNAAYDAWQFQESLAPHSADPHGSWNNCKSNHANCNSSQIQILQNFRNQMLNDIKGFSTTSQSGLFINSCFAHCQSERQDTWFADDSPLLNNMPIAIAVGNWFFDRQVVKAIDCAYPCDNTCHNLVFNVGKSAMVDSQSTSDDIPTSMLYSRST