Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050825.t1 | RHN49106.1 | 92.5 | 455 | 20 | 3 | 1 | 455 | 1 | 441 | 1.70E-245 | 858.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050825.t1 | Q9SFF6 | 72.7 | 366 | 99 | 1 | 63 | 428 | 50 | 414 | 3.6e-167 | 589.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050825.t1 | A0A396H778 | 92.5 | 455 | 20 | 3 | 1 | 455 | 1 | 441 | 1.2e-245 | 858.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050825 | MS.gene07116 | 0.837312 | 5.60E-57 | -1.69E-46 |
MS.gene050825 | MS.gene071614 | 0.818176 | 2.25E-52 | -1.69E-46 |
MS.gene050825 | MS.gene071900 | 0.808138 | 3.59E-50 | -1.69E-46 |
MS.gene050825 | MS.gene071901 | 0.814784 | 1.29E-51 | -1.69E-46 |
MS.gene050825 | MS.gene072631 | 0.910007 | 3.03E-82 | -1.69E-46 |
MS.gene050825 | MS.gene23102 | 0.924785 | 4.42E-90 | -1.69E-46 |
MS.gene050825 | MS.gene28622 | 0.92759 | 9.51E-92 | -1.69E-46 |
MS.gene050825 | MS.gene39698 | -0.801183 | 1.02E-48 | -1.69E-46 |
MS.gene050825 | MS.gene39835 | 0.811828 | 5.76E-51 | -1.69E-46 |
MS.gene050825 | MS.gene71891 | 0.801396 | 9.18E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene050825 | MS.gene22940 | PPI |
MS.gene050825 | MS.gene050805 | PPI |
MS.gene050825 | MS.gene050806 | PPI |
MS.gene21087 | MS.gene050825 | PPI |
MS.gene23104 | MS.gene050825 | PPI |
MS.gene005379 | MS.gene050825 | PPI |
MS.gene072607 | MS.gene050825 | PPI |
MS.gene20959 | MS.gene050825 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050825.t1 | MTR_7g110900 | 92.308 | 455 | 21 | 3 | 1 | 455 | 1 | 441 | 0.0 | 862 |
MS.gene050825.t1 | MTR_7g110900 | 92.056 | 428 | 20 | 3 | 1 | 428 | 1 | 414 | 0.0 | 811 |
MS.gene050825.t1 | MTR_1g085620 | 79.412 | 374 | 77 | 0 | 55 | 428 | 29 | 402 | 0.0 | 651 |
MS.gene050825.t1 | MTR_7g111280 | 71.117 | 367 | 106 | 0 | 63 | 429 | 53 | 419 | 0.0 | 585 |
MS.gene050825.t1 | MTR_4g124320 | 70.380 | 368 | 109 | 0 | 62 | 429 | 54 | 421 | 0.0 | 565 |
MS.gene050825.t1 | MTR_1g085070 | 69.149 | 376 | 100 | 2 | 54 | 428 | 41 | 401 | 0.0 | 564 |
MS.gene050825.t1 | MTR_1g085620 | 81.481 | 297 | 55 | 0 | 132 | 428 | 1 | 297 | 0.0 | 533 |
MS.gene050825.t1 | MTR_8g072010 | 50.269 | 372 | 183 | 1 | 59 | 428 | 20 | 391 | 4.97e-149 | 430 |
MS.gene050825.t1 | MTR_1g101000 | 54.032 | 372 | 166 | 3 | 61 | 427 | 34 | 405 | 1.16e-145 | 423 |
MS.gene050825.t1 | MTR_1g101000 | 54.032 | 372 | 166 | 3 | 61 | 427 | 34 | 405 | 1.22e-145 | 422 |
MS.gene050825.t1 | MTR_1g101020 | 53.226 | 372 | 169 | 3 | 61 | 427 | 34 | 405 | 6.67e-144 | 417 |
MS.gene050825.t1 | MTR_8g072000 | 49.051 | 369 | 186 | 1 | 62 | 428 | 24 | 392 | 1.44e-143 | 416 |
MS.gene050825.t1 | MTR_8g072000 | 48.919 | 370 | 187 | 1 | 62 | 429 | 55 | 424 | 3.61e-143 | 416 |
MS.gene050825.t1 | MTR_4g124320 | 69.259 | 270 | 78 | 2 | 62 | 331 | 54 | 318 | 9.68e-141 | 406 |
MS.gene050825.t1 | MTR_7g060760 | 50.820 | 366 | 174 | 2 | 65 | 428 | 56 | 417 | 3.53e-140 | 408 |
MS.gene050825.t1 | MTR_5g042650 | 48.767 | 365 | 181 | 2 | 65 | 427 | 28 | 388 | 2.80e-135 | 395 |
MS.gene050825.t1 | MTR_1g101000 | 52.601 | 346 | 158 | 4 | 61 | 400 | 34 | 379 | 1.28e-128 | 378 |
MS.gene050825.t1 | MTR_7g006750 | 53.191 | 94 | 44 | 0 | 205 | 298 | 467 | 560 | 2.87e-26 | 112 |
MS.gene050825.t1 | MTR_1g036590 | 58.537 | 82 | 34 | 0 | 246 | 327 | 270 | 351 | 5.33e-25 | 107 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050825.t1 | AT3G62060 | 70.000 | 390 | 116 | 1 | 59 | 447 | 48 | 437 | 0.0 | 593 |
MS.gene050825.t1 | AT3G05910 | 72.678 | 366 | 99 | 1 | 63 | 428 | 50 | 414 | 0.0 | 590 |
MS.gene050825.t1 | AT3G62060 | 72.237 | 371 | 102 | 1 | 59 | 428 | 48 | 418 | 0.0 | 588 |
MS.gene050825.t1 | AT2G46930 | 71.196 | 368 | 106 | 0 | 62 | 429 | 49 | 416 | 0.0 | 588 |
MS.gene050825.t1 | AT1G57590 | 71.154 | 364 | 105 | 0 | 65 | 428 | 79 | 442 | 0.0 | 583 |
MS.gene050825.t1 | AT5G26670 | 67.857 | 392 | 124 | 1 | 39 | 428 | 24 | 415 | 0.0 | 578 |
MS.gene050825.t1 | AT5G26670 | 69.360 | 297 | 91 | 0 | 132 | 428 | 1 | 297 | 3.51e-161 | 457 |
MS.gene050825.t1 | AT5G26670 | 69.360 | 297 | 91 | 0 | 132 | 428 | 1 | 297 | 3.51e-161 | 457 |
MS.gene050825.t1 | AT5G26670 | 69.360 | 297 | 91 | 0 | 132 | 428 | 1 | 297 | 3.51e-161 | 457 |
MS.gene050825.t1 | AT4G19420 | 55.586 | 367 | 161 | 1 | 64 | 428 | 23 | 389 | 1.94e-159 | 456 |
MS.gene050825.t1 | AT4G19420 | 55.586 | 367 | 161 | 1 | 64 | 428 | 23 | 389 | 1.94e-159 | 456 |
MS.gene050825.t1 | AT1G09550 | 58.721 | 344 | 141 | 1 | 64 | 407 | 40 | 382 | 1.32e-153 | 441 |
MS.gene050825.t1 | AT4G19420 | 50.746 | 402 | 161 | 2 | 64 | 428 | 23 | 424 | 2.90e-152 | 439 |
MS.gene050825.t1 | AT5G23870 | 53.533 | 368 | 165 | 4 | 66 | 427 | 35 | 402 | 4.03e-147 | 426 |
MS.gene050825.t1 | AT5G23870 | 53.533 | 368 | 165 | 4 | 66 | 427 | 35 | 402 | 4.03e-147 | 426 |
MS.gene050825.t1 | AT5G23870 | 53.533 | 368 | 165 | 4 | 66 | 427 | 35 | 402 | 4.81e-147 | 426 |
MS.gene050825.t1 | AT3G05910 | 75.194 | 258 | 63 | 1 | 63 | 320 | 50 | 306 | 6.78e-147 | 421 |
MS.gene050825.t1 | AT5G23870 | 53.533 | 368 | 165 | 4 | 66 | 427 | 35 | 402 | 9.08e-147 | 426 |
MS.gene050825.t1 | AT3G09410 | 48.711 | 388 | 194 | 2 | 47 | 429 | 40 | 427 | 8.59e-143 | 415 |
MS.gene050825.t1 | AT5G45280 | 48.476 | 361 | 183 | 2 | 66 | 423 | 24 | 384 | 1.97e-136 | 398 |
MS.gene050825.t1 | AT4G19410 | 48.199 | 361 | 184 | 2 | 66 | 423 | 24 | 384 | 5.48e-136 | 397 |
MS.gene050825.t1 | AT3G09405 | 46.615 | 384 | 200 | 2 | 43 | 423 | 28 | 409 | 2.89e-131 | 385 |
MS.gene050825.t1 | AT4G19410 | 48.547 | 344 | 175 | 1 | 66 | 407 | 24 | 367 | 1.79e-130 | 387 |
MS.gene050825.t1 | AT3G09410 | 48.580 | 352 | 176 | 2 | 47 | 393 | 40 | 391 | 1.14e-126 | 373 |
MS.gene050825.t1 | AT5G45280 | 50.877 | 285 | 138 | 1 | 66 | 348 | 24 | 308 | 1.28e-111 | 333 |
MS.gene050825.t1 | AT3G09405 | 45.215 | 303 | 161 | 2 | 124 | 423 | 2 | 302 | 5.08e-101 | 304 |
MS.gene050825.t1 | AT4G19420 | 58.744 | 223 | 90 | 1 | 62 | 282 | 21 | 243 | 2.07e-93 | 285 |
Find 106 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTTCACTTTGGTAGATTT+TGG | 0.102250 | 7.4:-5160009 | None:intergenic |
TACTTTGGAGGATCTGAATT+TGG | 0.129041 | 7.4:-5160819 | None:intergenic |
TTGCGATTGCCGTTGGAAAT+TGG | 0.247498 | 7.4:+5161367 | MS.gene050825:CDS |
TGGAGGTGTAGTTAGCTTAC+AGG | 0.258857 | 7.4:+5160190 | MS.gene050825:CDS |
TCATGTAGAACTGATATATC+TGG | 0.286074 | 7.4:+5160143 | MS.gene050825:intron |
AATGCGGGGCTAGACTTTCT+TGG | 0.319923 | 7.4:-5160735 | None:intergenic |
AATTTAGAGGACAGAAAATA+TGG | 0.324688 | 7.4:+5159788 | MS.gene050825:CDS |
CTCACTTGAAGACCAGATTA+TGG | 0.340475 | 7.4:-5161449 | None:intergenic |
GCTGCACAGCTTCAATTTAG+AGG | 0.354360 | 7.4:+5159775 | MS.gene050825:CDS |
AATCAGAAAATTACCGAAGT+TGG | 0.357974 | 7.4:-5160387 | None:intergenic |
ACTTTGGAGGATCTGAATTT+GGG | 0.360290 | 7.4:-5160818 | None:intergenic |
ATCCCACTCACTCTCATTCA+TGG | 0.363631 | 7.4:+5158340 | MS.gene050825:CDS |
CACACATTGAGGAATCTCTT+TGG | 0.368358 | 7.4:+5160170 | MS.gene050825:CDS |
TACCACTTCCATCCCGGATC+TGG | 0.372412 | 7.4:+5158766 | MS.gene050825:CDS |
ATAATGTTTGTCAGTATGTT+TGG | 0.373579 | 7.4:+5158726 | MS.gene050825:intron |
TTCCATCCCGGATCTGGATC+TGG | 0.382531 | 7.4:+5158772 | MS.gene050825:CDS |
TCTCTCACCTCGGGATATCT+TGG | 0.388144 | 7.4:+5158240 | MS.gene050825:CDS |
TCATGAGAGGTTGAGGCAGC+AGG | 0.395767 | 7.4:-5158318 | None:intergenic |
ACAAGAATTTATGAATAATC+CGG | 0.416697 | 7.4:-5160994 | None:intergenic |
TGACAATACCTGCCATAATC+TGG | 0.417076 | 7.4:+5161437 | MS.gene050825:CDS |
CAGCAGATCCTCATGGATCT+TGG | 0.417631 | 7.4:+5160758 | MS.gene050825:CDS |
TTTCCAACGGCAATCGCAAT+TGG | 0.423077 | 7.4:-5161363 | None:intergenic |
TCATGCATACCATGTTGTTA+AGG | 0.424811 | 7.4:-5161073 | None:intergenic |
TGGATGCTCTGCGGGTGGTC+TGG | 0.427319 | 7.4:+5159948 | MS.gene050825:CDS |
TCCAATATGGAAAACCTTGT+TGG | 0.438519 | 7.4:-5159854 | None:intergenic |
ATCAGAAAATTACCGAAGTT+GGG | 0.457711 | 7.4:-5160386 | None:intergenic |
CGATGTCGTTTCAGTTCCAT+TGG | 0.458197 | 7.4:+5158267 | MS.gene050825:CDS |
AAATAGTTGGCTCATTCAAT+TGG | 0.461267 | 7.4:+5158798 | MS.gene050825:CDS |
CATGAGGATCTGCTGAATGC+GGG | 0.468931 | 7.4:-5160750 | None:intergenic |
TTGCTCAATAATCCAGTGAA+TGG | 0.470456 | 7.4:-5159043 | None:intergenic |
CATGTAGAACTGATATATCT+GGG | 0.473034 | 7.4:+5160144 | MS.gene050825:intron |
GTGAAATGTTTGAGTGATGC+TGG | 0.478196 | 7.4:+5160024 | MS.gene050825:CDS |
CAGCCAATTGCGATTGCCGT+TGG | 0.487578 | 7.4:+5161360 | MS.gene050825:intron |
CTGGATCTGGTGCAAATAGT+TGG | 0.489001 | 7.4:+5158785 | MS.gene050825:CDS |
AGGTTGAGGCAGCAGGGGAG+AGG | 0.498501 | 7.4:-5158311 | None:intergenic |
TCAAAGTGAGGTACTGTGAT+GGG | 0.499780 | 7.4:+5159198 | MS.gene050825:CDS |
TGCTATATTCCCGCTCTACA+AGG | 0.500855 | 7.4:+5162930 | MS.gene050825:CDS |
TGTTTGGATGGAACTTTACC+TGG | 0.506783 | 7.4:+5158742 | MS.gene050825:CDS |
CCTGGTTACCACTTCCATCC+CGG | 0.507770 | 7.4:+5158760 | MS.gene050825:CDS |
AGTGGGATCATGAGAGGTTG+AGG | 0.515339 | 7.4:-5158325 | None:intergenic |
GAGTGTCAAAATTACTTTGG+AGG | 0.515481 | 7.4:-5160831 | None:intergenic |
ATCACTCAAACATTTCACTT+TGG | 0.516658 | 7.4:-5160019 | None:intergenic |
ATTCATGGAGCTGATTCAAA+AGG | 0.519185 | 7.4:+5158355 | MS.gene050825:CDS |
ATTATGGCAGGTATTGTCAC+AGG | 0.520288 | 7.4:-5161433 | None:intergenic |
ATTTGCACCAGATCCAGATC+CGG | 0.521168 | 7.4:-5158779 | None:intergenic |
TCTAAAGACACAACTTCTGA+TGG | 0.522097 | 7.4:-5158975 | None:intergenic |
GGAGCTGATTCAAAAGGAGC+AGG | 0.529067 | 7.4:+5158361 | MS.gene050825:CDS |
AAAAGTCAACCTTGTAGAGC+GGG | 0.529390 | 7.4:-5162939 | None:intergenic |
AATAAAGCTGAAGAAAATCC+TGG | 0.530795 | 7.4:+5159064 | MS.gene050825:CDS |
CCGGGATGGAAGTGGTAACC+AGG | 0.532137 | 7.4:-5158760 | None:intergenic |
CATGAGAGGTTGAGGCAGCA+GGG | 0.533233 | 7.4:-5158317 | None:intergenic |
TAGTTGGCTCATTCAATTGG+AGG | 0.533513 | 7.4:+5158801 | MS.gene050825:CDS |
ATCCAGATCCGGGATGGAAG+TGG | 0.540621 | 7.4:-5158768 | None:intergenic |
GTTCTGAGAAATGAGAAGAA+TGG | 0.547125 | 7.4:+5158135 | None:intergenic |
ACGCGGTTCCTCAAAATACA+TGG | 0.548149 | 7.4:+5159009 | MS.gene050825:CDS |
CTTGAAGACCAGATTATGGC+AGG | 0.552753 | 7.4:-5161445 | None:intergenic |
ACATTGAGGAATCTCTTTGG+AGG | 0.553002 | 7.4:+5160173 | MS.gene050825:CDS |
TTTGCACCAGATCCAGATCC+GGG | 0.553031 | 7.4:-5158778 | None:intergenic |
TGTGATGGGGCGTCTTTCAG+TGG | 0.553061 | 7.4:+5159212 | MS.gene050825:CDS |
ATGAGAGGTTGAGGCAGCAG+GGG | 0.553504 | 7.4:-5158316 | None:intergenic |
TGCATACCATGTTGTTAAGG+AGG | 0.557052 | 7.4:-5161070 | None:intergenic |
GACACAGAATCTCTCACCTC+GGG | 0.557126 | 7.4:+5158231 | MS.gene050825:CDS |
GCATACCATGTTGTTAAGGA+GGG | 0.557350 | 7.4:-5161069 | None:intergenic |
CACCAGATCCAGATCCGGGA+TGG | 0.559180 | 7.4:-5158774 | None:intergenic |
TGTTTGTCAGTATGTTTGGA+TGG | 0.563064 | 7.4:+5158730 | MS.gene050825:intron |
AAATTACCGAAGTTGGGTCC+AGG | 0.563109 | 7.4:-5160380 | None:intergenic |
CCGCATTCAGCAGATCCTCA+TGG | 0.567304 | 7.4:+5160751 | MS.gene050825:CDS |
CAGTGTTGGTAAATCTGCCA+TGG | 0.575081 | 7.4:+5162780 | MS.gene050825:intron |
TAAAAGTCAACCTTGTAGAG+CGG | 0.575730 | 7.4:-5162940 | None:intergenic |
TGCAGCTTATGATGCATGGC+AGG | 0.576179 | 7.4:+5160540 | MS.gene050825:CDS |
ATGTATCTTGTCTCTCCGAT+TGG | 0.579548 | 7.4:-5161028 | None:intergenic |
ATTGAAGAATTAATGTCGAA+GGG | 0.581479 | 7.4:+5159820 | MS.gene050825:CDS |
TAACCACCTGGACCCAACTT+CGG | 0.583326 | 7.4:+5160374 | MS.gene050825:CDS |
CTCTCCCCTCCTTAACAACA+TGG | 0.586154 | 7.4:+5161064 | MS.gene050825:CDS |
AATTGAAGAATTAATGTCGA+AGG | 0.586251 | 7.4:+5159819 | MS.gene050825:CDS |
GCTCCATGAATGAGAGTGAG+TGG | 0.593083 | 7.4:-5158343 | None:intergenic |
TTATCTGGATGCTCTGCGGG+TGG | 0.594030 | 7.4:+5159943 | MS.gene050825:CDS |
CCATGAGGATCTGCTGAATG+CGG | 0.598787 | 7.4:-5160751 | None:intergenic |
GTCAAAGTGAGGTACTGTGA+TGG | 0.606987 | 7.4:+5159197 | MS.gene050825:CDS |
TGAATGCAGCTTATGATGCA+TGG | 0.609693 | 7.4:+5160536 | MS.gene050825:CDS |
TGTAGAGCGGGAATATAGCA+TGG | 0.614931 | 7.4:-5162927 | None:intergenic |
CGGGAATATAGCATGGAGGT+AGG | 0.623170 | 7.4:-5162920 | None:intergenic |
CATACCATGTTGTTAAGGAG+GGG | 0.624484 | 7.4:-5161068 | None:intergenic |
CTCCATGAATGAGAGTGAGT+GGG | 0.626990 | 7.4:-5158342 | None:intergenic |
ATGAGGATCTGCTGAATGCG+GGG | 0.632595 | 7.4:-5160749 | None:intergenic |
GGGAATGAAGAACGCCAACA+AGG | 0.633094 | 7.4:+5159840 | MS.gene050825:CDS |
AGAGTGAGTGGGATCATGAG+AGG | 0.634312 | 7.4:-5158331 | None:intergenic |
AATCGGAGAGACAAGATACA+TGG | 0.638574 | 7.4:+5161030 | MS.gene050825:CDS |
GAACGTATATCATCTGCCAA+TGG | 0.639888 | 7.4:-5158283 | None:intergenic |
ATGTAGAACTGATATATCTG+GGG | 0.646188 | 7.4:+5160145 | MS.gene050825:intron |
CAAAGTGAGGTACTGTGATG+GGG | 0.646787 | 7.4:+5159199 | MS.gene050825:CDS |
CAAATGCTAAATGACATCAA+AGG | 0.647217 | 7.4:+5160951 | MS.gene050825:CDS |
AGACACAGAATCTCTCACCT+CGG | 0.647432 | 7.4:+5158230 | MS.gene050825:CDS |
TGTAGAACTGATATATCTGG+GGG | 0.648311 | 7.4:+5160146 | MS.gene050825:intron |
GCTGCATTCAGCAGAAACAG+TGG | 0.652873 | 7.4:-5160523 | None:intergenic |
TTATGGCAGGTATTGTCACA+GGG | 0.675845 | 7.4:-5161432 | None:intergenic |
CAATTATTCCAAGATCCATG+AGG | 0.680551 | 7.4:-5160766 | None:intergenic |
TTACCGAAGTTGGGTCCAGG+TGG | 0.682863 | 7.4:-5160377 | None:intergenic |
CAGTGGAGACAGTCAAAACG+AGG | 0.693681 | 7.4:+5159229 | MS.gene050825:CDS |
ACTGGAACAGAGTCAAAGTG+AGG | 0.697951 | 7.4:+5159186 | MS.gene050825:CDS |
TGGTAGACTCTCAATCCACA+AGG | 0.698984 | 7.4:+5162800 | MS.gene050825:CDS |
GATCTCGTGAGATCTAACTG+AGG | 0.728818 | 7.4:-5158203 | None:intergenic |
TATGGCAGGTATTGTCACAG+GGG | 0.750427 | 7.4:-5161431 | None:intergenic |
TGTGGATTGAGAGTCTACCA+TGG | 0.760817 | 7.4:-5162797 | None:intergenic |
GTAGAACTGATATATCTGGG+GGG | 0.773485 | 7.4:+5160147 | MS.gene050825:intron |
AGAGCGGGAATATAGCATGG+AGG | 0.786321 | 7.4:-5162924 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTTAATAAAATGATAGAT+TGG | + | chr7.4:5161775-5161794 | MS.gene050825:intron | 15.0% |
!! | TACTTAGTTAAATTATTCTT+TGG | + | chr7.4:5159354-5159373 | MS.gene050825:intron | 15.0% |
!! | TTGCTTTAATAAAATTTCTT+TGG | + | chr7.4:5161622-5161641 | MS.gene050825:intron | 15.0% |
!! | TTGTTATAGAAAAACATTAT+TGG | + | chr7.4:5161554-5161573 | MS.gene050825:intron | 15.0% |
!!! | ATAAAAGTATAATATCTTCA+AGG | - | chr7.4:5161681-5161700 | None:intergenic | 15.0% |
!!! | TAAAAGTATAATATCTTCAA+GGG | - | chr7.4:5161680-5161699 | None:intergenic | 15.0% |
!! | AAAATCCTCTTAACAAAAAT+TGG | - | chr7.4:5159289-5159308 | None:intergenic | 20.0% |
!! | AAGAATGATAAATTCACAAA+TGG | - | chr7.4:5161532-5161551 | None:intergenic | 20.0% |
!! | ACAAGAATTTATGAATAATC+CGG | - | chr7.4:5160997-5161016 | None:intergenic | 20.0% |
!! | TAAATTCATCATTACAAAAC+TGG | + | chr7.4:5162580-5162599 | MS.gene050825:intron | 20.0% |
!! | TAGAGACTAAAAATTATTTG+TGG | + | chr7.4:5161207-5161226 | MS.gene050825:intron | 20.0% |
!! | TCAATCTATCAAATATGATT+TGG | + | chr7.4:5162008-5162027 | MS.gene050825:intron | 20.0% |
!! | TGTATGTCAATGATAATAAT+AGG | - | chr7.4:5159317-5159336 | None:intergenic | 20.0% |
!!! | AAATCTCTTTTCTAATGAAT+GGG | + | chr7.4:5159684-5159703 | MS.gene050825:intron | 20.0% |
!!! | AATTATTCTTTGGAAATTTG+TGG | + | chr7.4:5159364-5159383 | MS.gene050825:intron | 20.0% |
!!! | CATATCATCATAAGTTTTTT+TGG | - | chr7.4:5158504-5158523 | None:intergenic | 20.0% |
!!! | CATTTTATTAACTTGAAAAG+TGG | - | chr7.4:5161769-5161788 | None:intergenic | 20.0% |
!!! | GTTATGTGTTATAATTTTTG+TGG | + | chr7.4:5159134-5159153 | MS.gene050825:intron | 20.0% |
!!! | TGCTAATGATTTTTTTTTTC+AGG | + | chr7.4:5159915-5159934 | MS.gene050825:intron | 20.0% |
!!! | TTTTTCCAATTTTTGTTAAG+AGG | + | chr7.4:5159281-5159300 | MS.gene050825:intron | 20.0% |
! | AAAAAAATCATTAGCATCCA+TGG | - | chr7.4:5159911-5159930 | None:intergenic | 25.0% |
! | AAAATTACGACATTCCAATA+TGG | - | chr7.4:5159870-5159889 | None:intergenic | 25.0% |
! | AATTGAAGAATTAATGTCGA+AGG | + | chr7.4:5159819-5159838 | MS.gene050825:CDS | 25.0% |
! | AATTTAGAGGACAGAAAATA+TGG | + | chr7.4:5159788-5159807 | MS.gene050825:CDS | 25.0% |
! | ACAATTATATCCAAGTTTAC+AGG | - | chr7.4:5160111-5160130 | None:intergenic | 25.0% |
! | ATAATGTTTGTCAGTATGTT+TGG | + | chr7.4:5158726-5158745 | MS.gene050825:intron | 25.0% |
! | ATCAAAAAACCAATTTCCAA+CGG | - | chr7.4:5161379-5161398 | None:intergenic | 25.0% |
! | ATTGAAGAATTAATGTCGAA+GGG | + | chr7.4:5159820-5159839 | MS.gene050825:CDS | 25.0% |
! | CTGAGAACAATAAAAAGAAA+GGG | - | chr7.4:5161303-5161322 | None:intergenic | 25.0% |
! | CTTAAAATCAACCCAATATT+CGG | + | chr7.4:5162181-5162200 | MS.gene050825:intron | 25.0% |
! | GGTCTATTATATTCACTTAT+AGG | + | chr7.4:5161599-5161618 | MS.gene050825:intron | 25.0% |
! | TCTGAGAACAATAAAAAGAA+AGG | - | chr7.4:5161304-5161323 | None:intergenic | 25.0% |
! | TGAATTAGAGAAAAGAAAGA+AGG | - | chr7.4:5162725-5162744 | None:intergenic | 25.0% |
! | TGGAATGATTACATTTGAAA+TGG | + | chr7.4:5161958-5161977 | MS.gene050825:intron | 25.0% |
! | TTAAAATCAACCCAATATTC+GGG | + | chr7.4:5162182-5162201 | MS.gene050825:intron | 25.0% |
! | TTTGAGTCATTACAATTCAT+TGG | + | chr7.4:5161911-5161930 | MS.gene050825:intron | 25.0% |
!! | AAAAAACACCATTCATTTTG+TGG | + | chr7.4:5159391-5159410 | MS.gene050825:intron | 25.0% |
!! | AATCTTTTCCTCTTCTATTT+CGG | + | chr7.4:5161154-5161173 | MS.gene050825:intron | 25.0% |
!! | ATACAAGTTTTCTAACAGAA+AGG | - | chr7.4:5160286-5160305 | None:intergenic | 25.0% |
!! | ATCCAATTATAATTTTCCCA+AGG | + | chr7.4:5161699-5161718 | MS.gene050825:intron | 25.0% |
!! | GAAATCTCTTTTCTAATGAA+TGG | + | chr7.4:5159683-5159702 | MS.gene050825:intron | 25.0% |
!! | TAGAAAAACATTATTGGCTA+AGG | + | chr7.4:5161560-5161579 | MS.gene050825:intron | 25.0% |
!! | TGTTTGAAAACTTTTCTTCA+GGG | + | chr7.4:5158935-5158954 | MS.gene050825:intron | 25.0% |
!!! | ATCAGTAGCTTATTTTCATA+AGG | + | chr7.4:5158537-5158556 | MS.gene050825:intron | 25.0% |
!!! | ATGTTCAAGTATTTTGATCA+TGG | + | chr7.4:5158825-5158844 | MS.gene050825:intron | 25.0% |
!!! | CTTTTGTTTATATTTGAGTC+CGG | + | chr7.4:5162031-5162050 | MS.gene050825:intron | 25.0% |
!!! | GGGTTGATTTTAAGATTTAA+GGG | - | chr7.4:5162175-5162194 | None:intergenic | 25.0% |
!!! | TAAGAATTTTAGTTCCATCA+TGG | - | chr7.4:5162874-5162893 | None:intergenic | 25.0% |
!!! | TGGGTTGATTTTAAGATTTA+AGG | - | chr7.4:5162176-5162195 | None:intergenic | 25.0% |
!!! | TGTTCAAGTATTTTGATCAT+GGG | + | chr7.4:5158826-5158845 | MS.gene050825:intron | 25.0% |
!!! | TTGTTTTTCCATGTATTTTG+AGG | - | chr7.4:5159020-5159039 | None:intergenic | 25.0% |
!!! | TTTATTAGTCTTTGCTAGTA+TGG | + | chr7.4:5159658-5159677 | MS.gene050825:intron | 25.0% |
AACAATAAAAAGAAAGGGAG+AGG | - | chr7.4:5161298-5161317 | None:intergenic | 30.0% | |
AAGAAAGAAGGTGAAATTTC+TGG | - | chr7.4:5162713-5162732 | None:intergenic | 30.0% | |
AAGTGGTGCAATTAAAAAGA+AGG | - | chr7.4:5161752-5161771 | None:intergenic | 30.0% | |
AATAAAGCTGAAGAAAATCC+TGG | + | chr7.4:5159064-5159083 | MS.gene050825:CDS | 30.0% | |
AATCAGAAAATTACCGAAGT+TGG | - | chr7.4:5160390-5160409 | None:intergenic | 30.0% | |
ATCACTCAAACATTTCACTT+TGG | - | chr7.4:5160022-5160041 | None:intergenic | 30.0% | |
ATCAGAAAATTACCGAAGTT+GGG | - | chr7.4:5160389-5160408 | None:intergenic | 30.0% | |
ATGTAGAACTGATATATCTG+GGG | + | chr7.4:5160145-5160164 | MS.gene050825:intron | 30.0% | |
ATGTTGGATTGTATTGGAAT+AGG | + | chr7.4:5162311-5162330 | MS.gene050825:intron | 30.0% | |
ATTCCAAAAATACCCTTTCA+CGG | - | chr7.4:5161944-5161963 | None:intergenic | 30.0% | |
CAAAGTTATTGTCTTTCGTA+CGG | + | chr7.4:5161473-5161492 | MS.gene050825:intron | 30.0% | |
CAAATGCTAAATGACATCAA+AGG | + | chr7.4:5160951-5160970 | MS.gene050825:CDS | 30.0% | |
CATGTAGAACTGATATATCT+GGG | + | chr7.4:5160144-5160163 | MS.gene050825:intron | 30.0% | |
CCTAATATCACAACTTAAGA+TGG | - | chr7.4:5162559-5162578 | None:intergenic | 30.0% | |
GAGTCAATCTAGATTTCATA+AGG | + | chr7.4:5161812-5161831 | MS.gene050825:intron | 30.0% | |
GTATGAATTCACAAGTCAAT+TGG | - | chr7.4:5159746-5159765 | None:intergenic | 30.0% | |
GTCCTTGGGAAAATTATAAT+TGG | - | chr7.4:5161704-5161723 | None:intergenic | 30.0% | |
TAACTATCCAGTGTTCTATA+AGG | - | chr7.4:5162445-5162464 | None:intergenic | 30.0% | |
TAAGGGATCATGATACAATA+GGG | - | chr7.4:5162158-5162177 | None:intergenic | 30.0% | |
TATTCAATCATAGATGTCCA+TGG | + | chr7.4:5159891-5159910 | MS.gene050825:intron | 30.0% | |
TCATGTAGAACTGATATATC+TGG | + | chr7.4:5160143-5160162 | MS.gene050825:intron | 30.0% | |
TGACTCAAATGATCGATAAA+AGG | - | chr7.4:5161900-5161919 | None:intergenic | 30.0% | |
TTAAGGGATCATGATACAAT+AGG | - | chr7.4:5162159-5162178 | None:intergenic | 30.0% | |
TTCTTAAAATGAGACGATGT+AGG | - | chr7.4:5162688-5162707 | None:intergenic | 30.0% | |
TTTCATGTCTTCACTATTCA+TGG | + | chr7.4:5158643-5158662 | MS.gene050825:intron | 30.0% | |
! | AAATAGTTGGCTCATTCAAT+TGG | + | chr7.4:5158798-5158817 | MS.gene050825:CDS | 30.0% |
! | ACATGATCGATCAAATTTTG+AGG | - | chr7.4:5160496-5160515 | None:intergenic | 30.0% |
! | ACCTAGTATTTTGTCTCAAA+TGG | + | chr7.4:5158675-5158694 | MS.gene050825:intron | 30.0% |
! | CATTTCACTTTGGTAGATTT+TGG | - | chr7.4:5160012-5160031 | None:intergenic | 30.0% |
! | CCATCTTAAGTTGTGATATT+AGG | + | chr7.4:5162556-5162575 | MS.gene050825:intron | 30.0% |
! | CTGAAGAAAAGTTTTCAAAC+AGG | - | chr7.4:5158936-5158955 | None:intergenic | 30.0% |
! | CTGTTTGAAAACTTTTCTTC+AGG | + | chr7.4:5158934-5158953 | MS.gene050825:intron | 30.0% |
! | GCAAATGTACATTTTTCTTG+TGG | + | chr7.4:5159580-5159599 | MS.gene050825:intron | 30.0% |
! | TAATGCAGACTCAGTAATTT+TGG | - | chr7.4:5161657-5161676 | None:intergenic | 30.0% |
! | TCCATTTGAGACAAAATACT+AGG | - | chr7.4:5158679-5158698 | None:intergenic | 30.0% |
!! | AATTTGTTGAGTGACTTGAA+TGG | + | chr7.4:5162391-5162410 | MS.gene050825:intron | 30.0% |
!! | ACTGTACTATTTTAGAAGCA+CGG | - | chr7.4:5161109-5161128 | None:intergenic | 30.0% |
!! | AGAGAGTGTCAAAATTACTT+TGG | - | chr7.4:5160837-5160856 | None:intergenic | 30.0% |
!! | ATTGACGTCTTTGAAATTGT+AGG | + | chr7.4:5160320-5160339 | MS.gene050825:intron | 30.0% |
!! | TAGATTTTGGAAACAAGCTT+TGG | - | chr7.4:5159999-5160018 | None:intergenic | 30.0% |
!! | TAGCTTATTTTCATAAGGTC+TGG | + | chr7.4:5158542-5158561 | MS.gene050825:intron | 30.0% |
!! | TGCTTCTAAAATAGTACAGT+TGG | + | chr7.4:5161109-5161128 | MS.gene050825:intron | 30.0% |
!!! | TTTTTTCAGGCTCTTTTATC+TGG | + | chr7.4:5159928-5159947 | MS.gene050825:intron | 30.0% |
AAAAAGTTGTCTTAACCACC+TGG | + | chr7.4:5160362-5160381 | MS.gene050825:CDS | 35.0% | |
AAGGGATCATGATACAATAG+GGG | - | chr7.4:5162157-5162176 | None:intergenic | 35.0% | |
ACGTCCATCAGTAATTGATT+TGG | + | chr7.4:5162359-5162378 | MS.gene050825:intron | 35.0% | |
AGAGGTAAAACTATGGTTGT+TGG | + | chr7.4:5159456-5159475 | MS.gene050825:intron | 35.0% | |
AGTTAAAGAGGTCATGTGTT+TGG | + | chr7.4:5162284-5162303 | MS.gene050825:intron | 35.0% | |
AGTTCATCCTTATAGAACAC+TGG | + | chr7.4:5162435-5162454 | MS.gene050825:intron | 35.0% | |
ATAGACCCAAAGAGTTGTAA+TGG | - | chr7.4:5161586-5161605 | None:intergenic | 35.0% | |
ATTGCGAAGATGGGAAATAA+TGG | - | chr7.4:5162850-5162869 | None:intergenic | 35.0% | |
CAATTATTCCAAGATCCATG+AGG | - | chr7.4:5160769-5160788 | None:intergenic | 35.0% | |
CACACCAAATCAATTACTGA+TGG | - | chr7.4:5162366-5162385 | None:intergenic | 35.0% | |
CCTCTTCTATTTCGGAAAAT+TGG | + | chr7.4:5161162-5161181 | MS.gene050825:intron | 35.0% | |
GAAAAACAACTACCATTCAC+TGG | + | chr7.4:5159031-5159050 | MS.gene050825:CDS | 35.0% | |
GAATCATGCCACAAAATGAA+TGG | - | chr7.4:5159402-5159421 | None:intergenic | 35.0% | |
GAGTGTCAAAATTACTTTGG+AGG | - | chr7.4:5160834-5160853 | None:intergenic | 35.0% | |
GCAGATTTCAGTACACATAT+GGG | - | chr7.4:5159112-5159131 | None:intergenic | 35.0% | |
GGAAATACTGAGAGAGATAA+TGG | + | chr7.4:5161183-5161202 | MS.gene050825:intron | 35.0% | |
GGTTTCATGTTGGATTGTAT+TGG | + | chr7.4:5162305-5162324 | MS.gene050825:intron | 35.0% | |
GTATCATGTTGAATGGCATT+GGG | + | chr7.4:5162483-5162502 | MS.gene050825:intron | 35.0% | |
GTGTTTGGTATCATGTTGAA+TGG | + | chr7.4:5162476-5162495 | MS.gene050825:intron | 35.0% | |
GTTGGATTACTCTATTATCC+TGG | + | chr7.4:5159474-5159493 | MS.gene050825:intron | 35.0% | |
GTTGGTTAAACTAGAAGCTA+TGG | - | chr7.4:5160666-5160685 | None:intergenic | 35.0% | |
TAAGGCCATTACAACTCTTT+GGG | + | chr7.4:5161578-5161597 | MS.gene050825:intron | 35.0% | |
TAAGGTAAATGTCAACCTTG+TGG | - | chr7.4:5162818-5162837 | None:intergenic | 35.0% | |
TAGGAATATCATCACTGCAA+AGG | - | chr7.4:5162904-5162923 | None:intergenic | 35.0% | |
TATATACCACAAACACCAGT+TGG | - | chr7.4:5160684-5160703 | None:intergenic | 35.0% | |
TCATGCATACCATGTTGTTA+AGG | - | chr7.4:5161076-5161095 | None:intergenic | 35.0% | |
TCCAATATGGAAAACCTTGT+TGG | - | chr7.4:5159857-5159876 | None:intergenic | 35.0% | |
TCTAAAGACACAACTTCTGA+TGG | - | chr7.4:5158978-5158997 | None:intergenic | 35.0% | |
TGTAGAACTGATATATCTGG+GGG | + | chr7.4:5160146-5160165 | MS.gene050825:intron | 35.0% | |
TGTTTGTCAGTATGTTTGGA+TGG | + | chr7.4:5158730-5158749 | MS.gene050825:intron | 35.0% | |
TTGCTCAATAATCCAGTGAA+TGG | - | chr7.4:5159046-5159065 | None:intergenic | 35.0% | |
TTTAGAAAAACTACTCGACG+CGG | + | chr7.4:5158992-5159011 | MS.gene050825:CDS | 35.0% | |
! | AAATAATGGAAGGAAGGGTA+AGG | - | chr7.4:5162836-5162855 | None:intergenic | 35.0% |
! | AAATCAATTACTGATGGACG+TGG | - | chr7.4:5162360-5162379 | None:intergenic | 35.0% |
! | ACTTTGGAGGATCTGAATTT+GGG | - | chr7.4:5160821-5160840 | None:intergenic | 35.0% |
! | AGGTGGTTAAGACAACTTTT+TGG | - | chr7.4:5160363-5160382 | None:intergenic | 35.0% |
! | ATGGGAAATAATGGAAGGAA+GGG | - | chr7.4:5162841-5162860 | None:intergenic | 35.0% |
! | ATGTACATTTTTCTTGTGGC+AGG | + | chr7.4:5159584-5159603 | MS.gene050825:intron | 35.0% |
! | ATTCATGGAGCTGATTCAAA+AGG | + | chr7.4:5158355-5158374 | MS.gene050825:CDS | 35.0% |
! | ATTTTCGTGCTTTACAGTGT+TGG | + | chr7.4:5162766-5162785 | MS.gene050825:intron | 35.0% |
! | CAAACATGATTTGTATGACC+AGG | - | chr7.4:5159495-5159514 | None:intergenic | 35.0% |
! | CCAATTTTCCGAAATAGAAG+AGG | - | chr7.4:5161165-5161184 | None:intergenic | 35.0% |
! | TACTTTGGAGGATCTGAATT+TGG | - | chr7.4:5160822-5160841 | None:intergenic | 35.0% |
! | TCATGTGTTTGGTTTCATGT+TGG | + | chr7.4:5162295-5162314 | MS.gene050825:intron | 35.0% |
! | TTGAAAACTTTTCTTCAGGG+AGG | + | chr7.4:5158938-5158957 | MS.gene050825:intron | 35.0% |
! | TTTTCAACGACTTCTCAATC+CGG | + | chr7.4:5160975-5160994 | MS.gene050825:CDS | 35.0% |
!! | ATTAGTCTTTGCTAGTATGG+AGG | + | chr7.4:5159661-5159680 | MS.gene050825:intron | 35.0% |
!! | TAGCTTCTAGTTTAACCAAC+TGG | + | chr7.4:5160666-5160685 | MS.gene050825:intron | 35.0% |
!! | TCAGTAATTGATTTGGTGTG+TGG | + | chr7.4:5162366-5162385 | MS.gene050825:intron | 35.0% |
!! | TTGTTTTGCTCATTGCCAAT+CGG | + | chr7.4:5161013-5161032 | MS.gene050825:CDS | 35.0% |
!!! | AGTATTTTGATCATGGGTCT+CGG | + | chr7.4:5158832-5158851 | MS.gene050825:intron | 35.0% |
!!! | TGCGCACAGATTTTTTTAAC+TGG | + | chr7.4:5159168-5159187 | MS.gene050825:intron | 35.0% |
AAATGAGACGATGTAGGCAT+TGG | - | chr7.4:5162682-5162701 | None:intergenic | 40.0% | |
AAGTTTACAGGCAATGATGC+AGG | - | chr7.4:5160099-5160118 | None:intergenic | 40.0% | |
AATCGGAGAGACAAGATACA+TGG | + | chr7.4:5161030-5161049 | MS.gene050825:CDS | 40.0% | |
ACATTGAGGAATCTCTTTGG+AGG | + | chr7.4:5160173-5160192 | MS.gene050825:CDS | 40.0% | |
AGGGATCATGATACAATAGG+GGG | - | chr7.4:5162156-5162175 | None:intergenic | 40.0% | |
AGGGTAAAAGGGAAAAAACC+AGG | - | chr7.4:5159085-5159104 | None:intergenic | 40.0% | |
AGGTTGAAGTTGAACTACTG+TGG | + | chr7.4:5162079-5162098 | MS.gene050825:intron | 40.0% | |
AGTTTCACGTAAAGTAGACG+AGG | - | chr7.4:5162649-5162668 | None:intergenic | 40.0% | |
ATATGGGTGGAAGGGTAAAA+GGG | - | chr7.4:5159096-5159115 | None:intergenic | 40.0% | |
ATGTATCTTGTCTCTCCGAT+TGG | - | chr7.4:5161031-5161050 | None:intergenic | 40.0% | |
ATTGGTAGAACTCCGTGAAA+GGG | + | chr7.4:5161929-5161948 | MS.gene050825:intron | 40.0% | |
CACACATTGAGGAATCTCTT+TGG | + | chr7.4:5160170-5160189 | MS.gene050825:CDS | 40.0% | |
CACTGGATAGTTAAGAGAGT+TGG | + | chr7.4:5162452-5162471 | MS.gene050825:intron | 40.0% | |
CATACCATGTTGTTAAGGAG+GGG | - | chr7.4:5161071-5161090 | None:intergenic | 40.0% | |
CATCATGGAATTGCGAAGAT+GGG | - | chr7.4:5162859-5162878 | None:intergenic | 40.0% | |
CGCAGATTTCAGTACACATA+TGG | - | chr7.4:5159113-5159132 | None:intergenic | 40.0% | |
CGTCTACTTTACGTGAAACT+TGG | + | chr7.4:5162649-5162668 | MS.gene050825:intron | 40.0% | |
CTAAGGCCATTACAACTCTT+TGG | + | chr7.4:5161577-5161596 | MS.gene050825:intron | 40.0% | |
CTCACTTGAAGACCAGATTA+TGG | - | chr7.4:5161452-5161471 | None:intergenic | 40.0% | |
GAAAACACAAGTACTCTCTC+CGG | - | chr7.4:5162053-5162072 | None:intergenic | 40.0% | |
GAAACAGCGGATAGTTAAAG+AGG | + | chr7.4:5162272-5162291 | MS.gene050825:intron | 40.0% | |
GAACGTATATCATCTGCCAA+TGG | - | chr7.4:5158286-5158305 | None:intergenic | 40.0% | |
GAATATCATCACTGCAAAGG+AGG | - | chr7.4:5162901-5162920 | None:intergenic | 40.0% | |
GAGAGCTTTCATCATAGCAA+AGG | - | chr7.4:5161238-5161257 | None:intergenic | 40.0% | |
GATTTCAGTACACATATGGG+TGG | - | chr7.4:5159109-5159128 | None:intergenic | 40.0% | |
GCAATGAAATCTTCTGTCAG+TGG | + | chr7.4:5160255-5160274 | MS.gene050825:intron | 40.0% | |
GCATACCATGTTGTTAAGGA+GGG | - | chr7.4:5161072-5161091 | None:intergenic | 40.0% | |
GGACAGAAATCATGAAACAG+CGG | + | chr7.4:5162259-5162278 | MS.gene050825:intron | 40.0% | |
GGTATCATGTTGAATGGCAT+TGG | + | chr7.4:5162482-5162501 | MS.gene050825:intron | 40.0% | |
GTAGAACTGATATATCTGGG+GGG | + | chr7.4:5160147-5160166 | MS.gene050825:intron | 40.0% | |
GTGAAATGTTTGAGTGATGC+TGG | + | chr7.4:5160024-5160043 | MS.gene050825:CDS | 40.0% | |
GTTGAGTGACTTGAATGGAT+AGG | + | chr7.4:5162396-5162415 | MS.gene050825:intron | 40.0% | |
GTTTAACCAACTGGTGTTTG+TGG | + | chr7.4:5160675-5160694 | MS.gene050825:intron | 40.0% | |
TGAATGCAGCTTATGATGCA+TGG | + | chr7.4:5160536-5160555 | MS.gene050825:CDS | 40.0% | |
TGACAATACCTGCCATAATC+TGG | + | chr7.4:5161437-5161456 | MS.gene050825:CDS | 40.0% | |
TGCATACCATGTTGTTAAGG+AGG | - | chr7.4:5161073-5161092 | None:intergenic | 40.0% | |
TGCATCATTGCCTGTAAACT+TGG | + | chr7.4:5160098-5160117 | MS.gene050825:intron | 40.0% | |
TGTCTTCACTATTCATGGTG+TGG | + | chr7.4:5158648-5158667 | MS.gene050825:intron | 40.0% | |
TGTGAATTCATACCCCTTTC+AGG | + | chr7.4:5159753-5159772 | MS.gene050825:intron | 40.0% | |
TGTTTGGATGGAACTTTACC+TGG | + | chr7.4:5158742-5158761 | MS.gene050825:CDS | 40.0% | |
! | AAAACTTTTCTTCAGGGAGG+AGG | + | chr7.4:5158941-5158960 | MS.gene050825:intron | 40.0% |
! | ATGTTGAATGGCATTGGGTT+TGG | + | chr7.4:5162488-5162507 | MS.gene050825:intron | 40.0% |
! | ATTATGGCAGGTATTGTCAC+AGG | - | chr7.4:5161436-5161455 | None:intergenic | 40.0% |
! | CGAAGATGGGAAATAATGGA+AGG | - | chr7.4:5162846-5162865 | None:intergenic | 40.0% |
! | GATGGGAAATAATGGAAGGA+AGG | - | chr7.4:5162842-5162861 | None:intergenic | 40.0% |
! | GCCAACAAGGTTTTCCATAT+TGG | + | chr7.4:5159853-5159872 | MS.gene050825:intron | 40.0% |
! | TAGTTGGCTCATTCAATTGG+AGG | + | chr7.4:5158801-5158820 | MS.gene050825:CDS | 40.0% |
! | TCTTTTATCTGGATGCTCTG+CGG | + | chr7.4:5159939-5159958 | MS.gene050825:CDS | 40.0% |
! | TGAATGGGCTCTTCTTAAGA+AGG | + | chr7.4:5159699-5159718 | MS.gene050825:intron | 40.0% |
! | TGTTGAATGGCATTGGGTTT+GGG | + | chr7.4:5162489-5162508 | MS.gene050825:intron | 40.0% |
! | TTATGGCAGGTATTGTCACA+GGG | - | chr7.4:5161435-5161454 | None:intergenic | 40.0% |
! | TTTGTTTCCTCGAAGTGCTA+TGG | + | chr7.4:5160632-5160651 | MS.gene050825:intron | 40.0% |
! | TTTTTCTTGTGGCAGGAAGA+AGG | + | chr7.4:5159591-5159610 | MS.gene050825:intron | 40.0% |
!! | GTTAAGAGAGTTGGTGTGTT+TGG | + | chr7.4:5162461-5162480 | MS.gene050825:intron | 40.0% |
!! | TCAAAGTGAGGTACTGTGAT+GGG | + | chr7.4:5159198-5159217 | MS.gene050825:CDS | 40.0% |
!!! | ACTCCGTGAAAGGGTATTTT+TGG | + | chr7.4:5161938-5161957 | MS.gene050825:intron | 40.0% |
!!! | GAGAGAGTACTTGTGTTTTC+GGG | + | chr7.4:5162053-5162072 | MS.gene050825:intron | 40.0% |
!!! | GGAGAGAGTACTTGTGTTTT+CGG | + | chr7.4:5162052-5162071 | MS.gene050825:intron | 40.0% |
AAATTACCGAAGTTGGGTCC+AGG | - | chr7.4:5160383-5160402 | None:intergenic | 45.0% | |
ACGAGGTCAGTGAGATAGTA+TGG | + | chr7.4:5159246-5159265 | MS.gene050825:intron | 45.0% | |
ACGCGGTTCCTCAAAATACA+TGG | + | chr7.4:5159009-5159028 | MS.gene050825:CDS | 45.0% | |
ACGTGGATGGATGTATTCAG+AGG | - | chr7.4:5162343-5162362 | None:intergenic | 45.0% | |
ACTGGAACAGAGTCAAAGTG+AGG | + | chr7.4:5159186-5159205 | MS.gene050825:CDS | 45.0% | |
AGACACAGAATCTCTCACCT+CGG | + | chr7.4:5158230-5158249 | MS.gene050825:CDS | 45.0% | |
ATCCATACCATAGCACTTCG+AGG | - | chr7.4:5160642-5160661 | None:intergenic | 45.0% | |
ATCCCACTCACTCTCATTCA+TGG | + | chr7.4:5158340-5158359 | MS.gene050825:CDS | 45.0% | |
ATTTGCACCAGATCCAGATC+CGG | - | chr7.4:5158782-5158801 | None:intergenic | 45.0% | |
CAGTACACATATGGGTGGAA+GGG | - | chr7.4:5159104-5159123 | None:intergenic | 45.0% | |
CATATGGGTGGAAGGGTAAA+AGG | - | chr7.4:5159097-5159116 | None:intergenic | 45.0% | |
CATTGGTAGAACTCCGTGAA+AGG | + | chr7.4:5161928-5161947 | MS.gene050825:intron | 45.0% | |
CCATCATGGAATTGCGAAGA+TGG | - | chr7.4:5162860-5162879 | None:intergenic | 45.0% | |
CCATCTTCGCAATTCCATGA+TGG | + | chr7.4:5162857-5162876 | MS.gene050825:intron | 45.0% | |
CTCCATGAATGAGAGTGAGT+GGG | - | chr7.4:5158345-5158364 | None:intergenic | 45.0% | |
CTGGATCTGGTGCAAATAGT+TGG | + | chr7.4:5158785-5158804 | MS.gene050825:CDS | 45.0% | |
CTTGAAGACCAGATTATGGC+AGG | - | chr7.4:5161448-5161467 | None:intergenic | 45.0% | |
GAACTTCTGGCCCGAATATT+GGG | - | chr7.4:5162195-5162214 | None:intergenic | 45.0% | |
GATCTCGTGAGATCTAACTG+AGG | - | chr7.4:5158206-5158225 | None:intergenic | 45.0% | |
GCTATATTCCCGCTCTACAA+GGG | + | chr7.4:5162931-5162950 | MS.gene050825:CDS | 45.0% | |
GCTGCACAGCTTCAATTTAG+AGG | + | chr7.4:5159775-5159794 | MS.gene050825:CDS | 45.0% | |
TCAGTACACATATGGGTGGA+AGG | - | chr7.4:5159105-5159124 | None:intergenic | 45.0% | |
TGCTATATTCCCGCTCTACA+AGG | + | chr7.4:5162930-5162949 | MS.gene050825:CDS | 45.0% | |
TGGGGTCTGGATAATTTGGT+GGG | + | chr7.4:5162508-5162527 | MS.gene050825:intron | 45.0% | |
TGGTAGACTCTCAATCCACA+AGG | + | chr7.4:5162800-5162819 | MS.gene050825:CDS | 45.0% | |
TGTAGAGCGGGAATATAGCA+TGG | - | chr7.4:5162930-5162949 | None:intergenic | 45.0% | |
TTGCGATTGCCGTTGGAAAT+TGG | + | chr7.4:5161367-5161386 | MS.gene050825:CDS | 45.0% | |
TTGGGGTCTGGATAATTTGG+TGG | + | chr7.4:5162507-5162526 | MS.gene050825:intron | 45.0% | |
TTTCCAACGGCAATCGCAAT+TGG | - | chr7.4:5161366-5161385 | None:intergenic | 45.0% | |
TTTCCTTTCCAACACCACGT+AGG | + | chr7.4:5162230-5162249 | MS.gene050825:intron | 45.0% | |
! | CAATTACTGATGGACGTGGA+TGG | - | chr7.4:5162356-5162375 | None:intergenic | 45.0% |
! | CGATGTCGTTTCAGTTCCAT+TGG | + | chr7.4:5158267-5158286 | MS.gene050825:CDS | 45.0% |
! | CTTTTATCTGGATGCTCTGC+GGG | + | chr7.4:5159940-5159959 | MS.gene050825:CDS | 45.0% |
! | GGTTTGGGGTCTGGATAATT+TGG | + | chr7.4:5162504-5162523 | MS.gene050825:intron | 45.0% |
! | GTTGAATGGCATTGGGTTTG+GGG | + | chr7.4:5162490-5162509 | MS.gene050825:intron | 45.0% |
! | TATGGCAGGTATTGTCACAG+GGG | - | chr7.4:5161434-5161453 | None:intergenic | 45.0% |
! | TCGTTTTCCAAGATATCCCG+AGG | - | chr7.4:5158250-5158269 | None:intergenic | 45.0% |
! | TGGAGGTGTAGTTAGCTTAC+AGG | + | chr7.4:5160190-5160209 | MS.gene050825:CDS | 45.0% |
! | TGTGGATTGAGAGTCTACCA+TGG | - | chr7.4:5162800-5162819 | None:intergenic | 45.0% |
! | TTCCTCGAAGTGCTATGGTA+TGG | + | chr7.4:5160637-5160656 | MS.gene050825:intron | 45.0% |
!! | AAGGAAAGCAGTGGACTACT+CGG | - | chr7.4:5162217-5162236 | None:intergenic | 45.0% |
!! | CAAAGTGAGGTACTGTGATG+GGG | + | chr7.4:5159199-5159218 | MS.gene050825:CDS | 45.0% |
!! | CAGTGTTGGTAAATCTGCCA+TGG | + | chr7.4:5162780-5162799 | MS.gene050825:intron | 45.0% |
!! | GTACTTGTGTTTTCGGGCTT+AGG | + | chr7.4:5162059-5162078 | MS.gene050825:intron | 45.0% |
!! | GTCAAAGTGAGGTACTGTGA+TGG | + | chr7.4:5159197-5159216 | MS.gene050825:CDS | 45.0% |
!! | TGTGTGTGTGCGCTTTGTTT+AGG | + | chr7.4:5158617-5158636 | MS.gene050825:intron | 45.0% |
AATGCGGGGCTAGACTTTCT+TGG | - | chr7.4:5160738-5160757 | None:intergenic | 50.0% | |
ACCACCCTTCAGGCATAGAA+TGG | - | chr7.4:5161728-5161747 | None:intergenic | 50.0% | |
AGAGCGGGAATATAGCATGG+AGG | - | chr7.4:5162927-5162946 | None:intergenic | 50.0% | |
AGAGTGAGTGGGATCATGAG+AGG | - | chr7.4:5158334-5158353 | None:intergenic | 50.0% | |
AGGCATAGAATGGGGTCCTT+GGG | - | chr7.4:5161718-5161737 | None:intergenic | 50.0% | |
AGTGGGATCATGAGAGGTTG+AGG | - | chr7.4:5158328-5158347 | None:intergenic | 50.0% | |
ATGAGGATCTGCTGAATGCG+GGG | - | chr7.4:5160752-5160771 | None:intergenic | 50.0% | |
CACCCTTCAGGCATAGAATG+GGG | - | chr7.4:5161726-5161745 | None:intergenic | 50.0% | |
CAGCAGATCCTCATGGATCT+TGG | + | chr7.4:5160758-5160777 | MS.gene050825:CDS | 50.0% | |
CAGTGGAGACAGTCAAAACG+AGG | + | chr7.4:5159229-5159248 | MS.gene050825:CDS | 50.0% | |
CATGAGGATCTGCTGAATGC+GGG | - | chr7.4:5160753-5160772 | None:intergenic | 50.0% | |
CCAACACCACGTAGGTGATT+CGG | + | chr7.4:5162238-5162257 | MS.gene050825:intron | 50.0% | |
CCACCCTTCAGGCATAGAAT+GGG | - | chr7.4:5161727-5161746 | None:intergenic | 50.0% | |
CCATGAGGATCTGCTGAATG+CGG | - | chr7.4:5160754-5160773 | None:intergenic | 50.0% | |
CGGGAATATAGCATGGAGGT+AGG | - | chr7.4:5162923-5162942 | None:intergenic | 50.0% | |
CTCTCCCCTCCTTAACAACA+TGG | + | chr7.4:5161064-5161083 | MS.gene050825:CDS | 50.0% | |
GACACAGAATCTCTCACCTC+GGG | + | chr7.4:5158231-5158250 | MS.gene050825:CDS | 50.0% | |
GACCCCATTCTATGCCTGAA+GGG | + | chr7.4:5161721-5161740 | MS.gene050825:intron | 50.0% | |
GCTCCATGAATGAGAGTGAG+TGG | - | chr7.4:5158346-5158365 | None:intergenic | 50.0% | |
GCTGCATTCAGCAGAAACAG+TGG | - | chr7.4:5160526-5160545 | None:intergenic | 50.0% | |
GGAACTTCTGGCCCGAATAT+TGG | - | chr7.4:5162196-5162215 | None:intergenic | 50.0% | |
GGGAATGAAGAACGCCAACA+AGG | + | chr7.4:5159840-5159859 | MS.gene050825:CDS | 50.0% | |
GGTGGGGAGAGGTAAAACTA+TGG | + | chr7.4:5159449-5159468 | MS.gene050825:intron | 50.0% | |
TAACCACCTGGACCCAACTT+CGG | + | chr7.4:5160374-5160393 | MS.gene050825:CDS | 50.0% | |
TCTCTCACCTCGGGATATCT+TGG | + | chr7.4:5158240-5158259 | MS.gene050825:CDS | 50.0% | |
TGAAGCTGTGCAGCCTGAAA+GGG | - | chr7.4:5159769-5159788 | None:intergenic | 50.0% | |
TGCAGCTTATGATGCATGGC+AGG | + | chr7.4:5160540-5160559 | MS.gene050825:CDS | 50.0% | |
TTCTGTCCGAATCACCTACG+TGG | - | chr7.4:5162247-5162266 | None:intergenic | 50.0% | |
TTGAAGCTGTGCAGCCTGAA+AGG | - | chr7.4:5159770-5159789 | None:intergenic | 50.0% | |
TTTGCACCAGATCCAGATCC+GGG | - | chr7.4:5158781-5158800 | None:intergenic | 50.0% | |
! | CTTTTCTTCAGGGAGGAGGA+TGG | + | chr7.4:5158945-5158964 | MS.gene050825:intron | 50.0% |
! | GGAGCTGATTCAAAAGGAGC+AGG | + | chr7.4:5158361-5158380 | MS.gene050825:CDS | 50.0% |
! | GGTGTTGGAAAGGAAAGCAG+TGG | - | chr7.4:5162226-5162245 | None:intergenic | 50.0% |
! | TCACCTACGTGGTGTTGGAA+AGG | - | chr7.4:5162236-5162255 | None:intergenic | 50.0% |
!! | AAAAGAAGGCACCACCCTTC+AGG | - | chr7.4:5161738-5161757 | None:intergenic | 50.0% |
!! | AGTGGACTACTCGGAACTTC+TGG | - | chr7.4:5162208-5162227 | None:intergenic | 50.0% |
ATCCAGATCCGGGATGGAAG+TGG | - | chr7.4:5158771-5158790 | None:intergenic | 55.0% | |
ATGAGAGGTTGAGGCAGCAG+GGG | - | chr7.4:5158319-5158338 | None:intergenic | 55.0% | |
ATTACCTCACGCAGCCTGCT+GGG | + | chr7.4:5159427-5159446 | MS.gene050825:intron | 55.0% | |
CAGCCAATTGCGATTGCCGT+TGG | + | chr7.4:5161360-5161379 | MS.gene050825:intron | 55.0% | |
CAGGCAATGATGCAGGCTAG+AGG | - | chr7.4:5160092-5160111 | None:intergenic | 55.0% | |
CAGGCATAGAATGGGGTCCT+TGG | - | chr7.4:5161719-5161738 | None:intergenic | 55.0% | |
CATGAGAGGTTGAGGCAGCA+GGG | - | chr7.4:5158320-5158339 | None:intergenic | 55.0% | |
CCCATTCTATGCCTGAAGGG+TGG | + | chr7.4:5161724-5161743 | MS.gene050825:intron | 55.0% | |
CCGAATCACCTACGTGGTGT+TGG | - | chr7.4:5162241-5162260 | None:intergenic | 55.0% | |
CCGCATTCAGCAGATCCTCA+TGG | + | chr7.4:5160751-5160770 | MS.gene050825:CDS | 55.0% | |
CCTGGTTACCACTTCCATCC+CGG | + | chr7.4:5158760-5158779 | MS.gene050825:CDS | 55.0% | |
GAAGCTGTGCAGCCTGAAAG+GGG | - | chr7.4:5159768-5159787 | None:intergenic | 55.0% | |
GGACCCCATTCTATGCCTGA+AGG | + | chr7.4:5161720-5161739 | MS.gene050825:intron | 55.0% | |
TACCACTTCCATCCCGGATC+TGG | + | chr7.4:5158766-5158785 | MS.gene050825:CDS | 55.0% | |
TATTACCTCACGCAGCCTGC+TGG | + | chr7.4:5159426-5159445 | MS.gene050825:intron | 55.0% | |
TCATGAGAGGTTGAGGCAGC+AGG | - | chr7.4:5158321-5158340 | None:intergenic | 55.0% | |
TTACCGAAGTTGGGTCCAGG+TGG | - | chr7.4:5160380-5160399 | None:intergenic | 55.0% | |
TTATCTGGATGCTCTGCGGG+TGG | + | chr7.4:5159943-5159962 | MS.gene050825:CDS | 55.0% | |
TTCCATCCCGGATCTGGATC+TGG | + | chr7.4:5158772-5158791 | MS.gene050825:CDS | 55.0% | |
! | ATGGCATTGGGTTTGGGGTC+TGG | + | chr7.4:5162495-5162514 | MS.gene050825:intron | 55.0% |
! | TATCTGGGGGGCACACATTG+AGG | + | chr7.4:5160159-5160178 | MS.gene050825:CDS | 55.0% |
! | TGTGATGGGGCGTCTTTCAG+TGG | + | chr7.4:5159212-5159231 | MS.gene050825:CDS | 55.0% |
CACCAGATCCAGATCCGGGA+TGG | - | chr7.4:5158777-5158796 | None:intergenic | 60.0% | |
CCGGGATGGAAGTGGTAACC+AGG | - | chr7.4:5158763-5158782 | None:intergenic | 60.0% | |
TTACCTCACGCAGCCTGCTG+GGG | + | chr7.4:5159428-5159447 | MS.gene050825:intron | 60.0% | |
AGGTTGAGGCAGCAGGGGAG+AGG | - | chr7.4:5158314-5158333 | None:intergenic | 65.0% | |
TGGATGCTCTGCGGGTGGTC+TGG | + | chr7.4:5159948-5159967 | MS.gene050825:CDS | 65.0% | |
TTACCTCTCCCCACCCCAGC+AGG | - | chr7.4:5159444-5159463 | None:intergenic | 65.0% | |
CTCACGCAGCCTGCTGGGGT+GGG | + | chr7.4:5159432-5159451 | MS.gene050825:intron | 70.0% | |
TCACGCAGCCTGCTGGGGTG+GGG | + | chr7.4:5159433-5159452 | MS.gene050825:intron | 70.0% | |
CAGCCTGCTGGGGTGGGGAG+AGG | + | chr7.4:5159438-5159457 | MS.gene050825:intron | 75.0% | |
CCACCCCAGCAGGCTGCGTG+AGG | - | chr7.4:5159434-5159453 | None:intergenic | 75.0% | |
CCTCACGCAGCCTGCTGGGG+TGG | + | chr7.4:5159431-5159450 | MS.gene050825:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 5158145 | 5162951 | 5158145 | ID=MS.gene050825 |
chr7.4 | mRNA | 5158145 | 5162951 | 5158145 | ID=MS.gene050825.t1;Parent=MS.gene050825 |
chr7.4 | exon | 5158145 | 5158382 | 5158145 | ID=MS.gene050825.t1.exon1;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5158145 | 5158382 | 5158145 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5158740 | 5158822 | 5158740 | ID=MS.gene050825.t1.exon2;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5158740 | 5158822 | 5158740 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5158956 | 5159085 | 5158956 | ID=MS.gene050825.t1.exon3;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5158956 | 5159085 | 5158956 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5159177 | 5159250 | 5159177 | ID=MS.gene050825.t1.exon4;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5159177 | 5159250 | 5159177 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5159775 | 5159861 | 5159775 | ID=MS.gene050825.t1.exon5;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5159775 | 5159861 | 5159775 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5159937 | 5160061 | 5159937 | ID=MS.gene050825.t1.exon6;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5159937 | 5160061 | 5159937 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5160151 | 5160211 | 5160151 | ID=MS.gene050825.t1.exon7;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5160151 | 5160211 | 5160151 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5160342 | 5160395 | 5160342 | ID=MS.gene050825.t1.exon8;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5160342 | 5160395 | 5160342 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5160484 | 5160561 | 5160484 | ID=MS.gene050825.t1.exon9;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5160484 | 5160561 | 5160484 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5160733 | 5160838 | 5160733 | ID=MS.gene050825.t1.exon10;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5160733 | 5160838 | 5160733 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5160940 | 5161085 | 5160940 | ID=MS.gene050825.t1.exon11;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5160940 | 5161085 | 5160940 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5161363 | 5161466 | 5161363 | ID=MS.gene050825.t1.exon12;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5161363 | 5161466 | 5161363 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5162783 | 5162821 | 5162783 | ID=MS.gene050825.t1.exon13;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5162783 | 5162821 | 5162783 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
chr7.4 | exon | 5162910 | 5162951 | 5162910 | ID=MS.gene050825.t1.exon14;Parent=MS.gene050825.t1 |
chr7.4 | CDS | 5162910 | 5162951 | 5162910 | ID=cds.MS.gene050825.t1;Parent=MS.gene050825.t1 |
Gene Sequence |
Protein sequence |