Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23395.t1 | XP_024627937.1 | 95.1 | 515 | 24 | 1 | 2 | 515 | 26 | 540 | 2.70E-255 | 891 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23395.t1 | Q9SYD6 | 52.9 | 512 | 206 | 4 | 4 | 515 | 26 | 502 | 5.3e-127 | 456.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23395.t1 | G7LDM7 | 93.8 | 514 | 19 | 1 | 2 | 515 | 94 | 594 | 1.0e-251 | 878.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31105 | MS.gene23395 | PPI |
| MS.gene23395 | MS.gene052066 | PPI |
| MS.gene45542 | MS.gene23395 | PPI |
| MS.gene78396 | MS.gene23395 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23395.t1 | MTR_8g037170 | 97.665 | 514 | 12 | 0 | 2 | 515 | 26 | 539 | 0.0 | 1011 |
| MS.gene23395.t1 | MTR_8g036660 | 95.331 | 514 | 11 | 1 | 2 | 515 | 94 | 594 | 0.0 | 976 |
| MS.gene23395.t1 | MTR_8g037170 | 95.331 | 514 | 11 | 1 | 2 | 515 | 26 | 526 | 0.0 | 975 |
| MS.gene23395.t1 | MTR_8g037175 | 69.961 | 516 | 141 | 6 | 2 | 515 | 11 | 514 | 0.0 | 726 |
| MS.gene23395.t1 | MTR_3g029510 | 69.691 | 518 | 130 | 4 | 3 | 515 | 28 | 523 | 0.0 | 714 |
| MS.gene23395.t1 | MTR_2g097900 | 55.598 | 518 | 177 | 4 | 2 | 515 | 26 | 494 | 0.0 | 531 |
| MS.gene23395.t1 | MTR_2g097900 | 54.974 | 382 | 119 | 4 | 2 | 379 | 26 | 358 | 2.11e-126 | 375 |
| MS.gene23395.t1 | MTR_5g099020 | 39.779 | 362 | 214 | 2 | 156 | 515 | 178 | 537 | 9.56e-85 | 273 |
| MS.gene23395.t1 | MTR_5g099020 | 40.217 | 92 | 51 | 1 | 12 | 103 | 114 | 201 | 1.28e-13 | 73.6 |
| MS.gene23395.t1 | MTR_5g099020 | 41.159 | 345 | 199 | 2 | 173 | 515 | 195 | 537 | 2.70e-84 | 272 |
| MS.gene23395.t1 | MTR_5g099020 | 40.217 | 92 | 51 | 1 | 12 | 103 | 114 | 201 | 1.39e-13 | 73.6 |
| MS.gene23395.t1 | MTR_7g070210 | 42.045 | 264 | 153 | 0 | 171 | 434 | 203 | 466 | 8.09e-61 | 207 |
| MS.gene23395.t1 | MTR_7g070210 | 62.821 | 78 | 29 | 0 | 5 | 82 | 110 | 187 | 4.32e-17 | 84.3 |
| MS.gene23395.t1 | MTR_8g037130 | 88.095 | 42 | 5 | 0 | 2 | 43 | 11 | 52 | 8.98e-18 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23395.t1 | AT3G08040 | 58.527 | 516 | 180 | 6 | 1 | 515 | 24 | 506 | 0.0 | 539 |
| MS.gene23395.t1 | AT1G51340 | 53.307 | 514 | 201 | 2 | 4 | 515 | 20 | 496 | 3.84e-173 | 498 |
| MS.gene23395.t1 | AT1G51340 | 53.101 | 516 | 203 | 2 | 2 | 515 | 24 | 502 | 1.78e-172 | 496 |
| MS.gene23395.t1 | AT1G51340 | 53.101 | 516 | 203 | 2 | 2 | 515 | 24 | 502 | 1.78e-172 | 496 |
| MS.gene23395.t1 | AT1G51340 | 53.101 | 516 | 203 | 2 | 2 | 515 | 24 | 502 | 1.78e-172 | 496 |
| MS.gene23395.t1 | AT3G08040 | 58.313 | 403 | 162 | 3 | 116 | 515 | 3 | 402 | 1.30e-155 | 450 |
| MS.gene23395.t1 | AT1G51340 | 52.228 | 404 | 154 | 2 | 2 | 403 | 24 | 390 | 2.02e-124 | 370 |
| MS.gene23395.t1 | AT4G38380 | 41.576 | 368 | 205 | 4 | 154 | 515 | 72 | 435 | 1.88e-89 | 281 |
| MS.gene23395.t1 | AT4G38380 | 39.583 | 96 | 57 | 1 | 17 | 111 | 2 | 97 | 2.46e-12 | 69.3 |
| MS.gene23395.t1 | AT4G38380 | 41.576 | 368 | 205 | 4 | 154 | 515 | 110 | 473 | 4.44e-89 | 282 |
| MS.gene23395.t1 | AT4G38380 | 37.864 | 103 | 63 | 1 | 10 | 111 | 33 | 135 | 3.20e-13 | 72.4 |
| MS.gene23395.t1 | AT4G38380 | 41.848 | 368 | 204 | 4 | 154 | 515 | 182 | 545 | 7.88e-89 | 283 |
| MS.gene23395.t1 | AT4G38380 | 37.864 | 103 | 63 | 1 | 10 | 111 | 105 | 207 | 5.84e-13 | 71.6 |
| MS.gene23395.t1 | AT4G38380 | 41.848 | 368 | 204 | 4 | 154 | 515 | 182 | 545 | 7.88e-89 | 283 |
| MS.gene23395.t1 | AT4G38380 | 37.864 | 103 | 63 | 1 | 10 | 111 | 105 | 207 | 5.84e-13 | 71.6 |
| MS.gene23395.t1 | AT4G38380 | 42.693 | 349 | 192 | 3 | 173 | 515 | 189 | 535 | 2.32e-88 | 282 |
| MS.gene23395.t1 | AT4G38380 | 38.710 | 93 | 56 | 1 | 10 | 101 | 105 | 197 | 8.23e-13 | 71.2 |
| MS.gene23395.t1 | AT2G38330 | 41.808 | 354 | 202 | 2 | 164 | 515 | 151 | 502 | 4.91e-83 | 267 |
| MS.gene23395.t1 | AT2G38330 | 55.294 | 85 | 32 | 1 | 13 | 97 | 79 | 157 | 1.17e-14 | 77.0 |
Find 103 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGCCTTATTACTCTCTT+TGG | 0.180424 | 8.2:+62400187 | None:intergenic |
| GCACTTTCAAAGGAGATATT+AGG | 0.181910 | 8.2:-62401838 | MS.gene23395:CDS |
| CTCTCTGTTATTGTTGGATT+TGG | 0.194821 | 8.2:-62397727 | MS.gene23395:CDS |
| CAAGCAGCAATCCTTATATT+TGG | 0.210248 | 8.2:-62399701 | MS.gene23395:CDS |
| AGGAATATTTCGAGGATTTA+AGG | 0.230123 | 8.2:-62399310 | MS.gene23395:CDS |
| TCCTTACTCTTATTGCTTCT+AGG | 0.248659 | 8.2:+62399803 | None:intergenic |
| CTACTCTTTGGCTCAATTCT+TGG | 0.251038 | 8.2:-62399731 | MS.gene23395:CDS |
| ACATTAGCCTTTGTCTTTGA+TGG | 0.254932 | 8.2:-62397504 | MS.gene23395:CDS |
| AAATTGAAAATGGGCATAAA+AGG | 0.262720 | 8.2:-62398834 | MS.gene23395:CDS |
| ATATTCATTGAATGTGTTAT+TGG | 0.270614 | 8.2:-62398874 | MS.gene23395:CDS |
| GTCTTTGATGGTGTAAACTA+TGG | 0.276616 | 8.2:-62397492 | MS.gene23395:CDS |
| CACAGCATTCATAGGCCATT+TGG | 0.281840 | 8.2:-62401758 | MS.gene23395:CDS |
| TAGGATCTGAGGATAGTAAA+TGG | 0.297012 | 8.2:+62399822 | None:intergenic |
| TTCAACCTTGCCTTCAAGTT+TGG | 0.299575 | 8.2:-62398044 | MS.gene23395:CDS |
| TGAGCCTTATTACTCTCTTT+GGG | 0.304388 | 8.2:+62400188 | None:intergenic |
| AACCTACCGGGGCGCCTATT+CGG | 0.308957 | 8.2:+62397650 | None:intergenic |
| GCATCAACAGCACTACTCTT+TGG | 0.317330 | 8.2:-62399743 | MS.gene23395:CDS |
| TTCGCATGTTGGCCGGTGTC+TGG | 0.326864 | 8.2:-62397219 | MS.gene23395:CDS |
| CACTTTCAAAGGAGATATTA+GGG | 0.333507 | 8.2:-62401837 | MS.gene23395:CDS |
| AATACTAACAAGAGGAAATA+TGG | 0.340117 | 8.2:+62400340 | None:intergenic |
| ATCATACCAATGACATATAA+AGG | 0.344012 | 8.2:+62399276 | None:intergenic |
| GCAACCAATTCATTGGGATA+TGG | 0.353132 | 8.2:-62397267 | MS.gene23395:CDS |
| CTTATTGACACAGCATTCAT+AGG | 0.355448 | 8.2:-62401766 | MS.gene23395:CDS |
| CCCGTGGAACTTGCTGCTGC+TGG | 0.361735 | 8.2:-62400401 | MS.gene23395:CDS |
| GAGGTTTAGCTCCAAATATA+AGG | 0.361872 | 8.2:+62399690 | None:intergenic |
| TATTTGACATATAGATCATT+TGG | 0.375506 | 8.2:-62399366 | MS.gene23395:CDS |
| TCCTGCGGTTCTTCTCTCAT+TGG | 0.381954 | 8.2:-62399340 | MS.gene23395:CDS |
| TGTGACTTTAGCAGCAAGTT+TGG | 0.382070 | 8.2:-62398100 | MS.gene23395:CDS |
| GCGGGGCTCTCTGTTATTGT+TGG | 0.383217 | 8.2:-62397733 | MS.gene23395:CDS |
| ACAGCATTCATAGGCCATTT+GGG | 0.391004 | 8.2:-62401757 | MS.gene23395:intron |
| ACAACTCCTTTATATGTCAT+TGG | 0.400111 | 8.2:-62399282 | MS.gene23395:intron |
| ACAAAGGCTAATGTATTGAT+TGG | 0.403697 | 8.2:+62397513 | None:intergenic |
| TGCATATGCTTCATATTCCT+TGG | 0.403863 | 8.2:-62397457 | MS.gene23395:intron |
| GTTATACACTTTATCCGAAT+AGG | 0.408271 | 8.2:-62397664 | MS.gene23395:CDS |
| TACAGGAGCAACCAATTCAT+TGG | 0.411308 | 8.2:-62397274 | MS.gene23395:CDS |
| GCAAGTTTGGCTGCAAGGTT+AGG | 0.412706 | 8.2:-62398087 | MS.gene23395:CDS |
| CAATCCATATCCCAATGAAT+TGG | 0.422158 | 8.2:+62397263 | None:intergenic |
| GTTGGATTTGGATTATACTT+TGG | 0.424068 | 8.2:-62397715 | MS.gene23395:CDS |
| AGGATCTGAGGATAGTAAAT+GGG | 0.431049 | 8.2:+62399823 | None:intergenic |
| CATGCGAAGAGTCATATAGA+TGG | 0.445960 | 8.2:+62397234 | None:intergenic |
| GACACCCAAAGAGAGTAATA+AGG | 0.448317 | 8.2:-62400192 | MS.gene23395:CDS |
| CAAGTTGGATGCACTTTCAA+AGG | 0.449258 | 8.2:-62401848 | MS.gene23395:CDS |
| GGATAAAGTGTATAACTTGA+AGG | 0.450550 | 8.2:+62397671 | None:intergenic |
| GTGTAGAATTTCTACTGTAC+AGG | 0.459240 | 8.2:-62397291 | MS.gene23395:CDS |
| ATATAAGGATTGCTGCTTGT+AGG | 0.468626 | 8.2:+62399705 | None:intergenic |
| GGGAACAATGATAAGACTAA+TGG | 0.473214 | 8.2:-62400122 | MS.gene23395:CDS |
| TTTGGATTATACTTTGGAGC+TGG | 0.473327 | 8.2:-62397709 | MS.gene23395:CDS |
| TAAACCTCTATTATATGTGA+TGG | 0.479268 | 8.2:-62399675 | MS.gene23395:CDS |
| ACACCCATCACATATAATAG+AGG | 0.479329 | 8.2:+62399671 | None:intergenic |
| GATTTACAGGCAATCCTAGC+TGG | 0.483687 | 8.2:-62397832 | MS.gene23395:intron |
| TCCTAGAAGCAATAAGAGTA+AGG | 0.490502 | 8.2:-62399804 | MS.gene23395:CDS |
| ATATGGTGATCTTTGAAGCT+TGG | 0.499094 | 8.2:+62400357 | None:intergenic |
| TCCTTTGTGTTTAGGTCCCG+TGG | 0.506167 | 8.2:-62400417 | MS.gene23395:intron |
| AATGAAACAAATGGTACACT+TGG | 0.509940 | 8.2:-62400143 | MS.gene23395:CDS |
| GAAGAGAATAAATACCCAAA+TGG | 0.510007 | 8.2:+62401743 | None:intergenic |
| TATGTCAAATACTTCACTGC+TGG | 0.510141 | 8.2:+62399378 | None:intergenic |
| TGGATTGGCTATAGCTGTAC+AGG | 0.510832 | 8.2:-62397998 | MS.gene23395:intron |
| GTAGGACACAATGAAACAAA+TGG | 0.510901 | 8.2:-62400152 | MS.gene23395:CDS |
| GATTGCAATACCTTCTGCAT+TGG | 0.511833 | 8.2:-62401815 | MS.gene23395:CDS |
| CTGAGGAAGATACTATCAAA+AGG | 0.517731 | 8.2:-62400301 | MS.gene23395:CDS |
| GTGTCAATAAGAGAAGCAAT+AGG | 0.518262 | 8.2:+62401778 | None:intergenic |
| TAGCAGCAAGTTTGGCTGCA+AGG | 0.518528 | 8.2:-62398092 | MS.gene23395:CDS |
| AATCCTAGCTGGTTCTTTCG+CGG | 0.520249 | 8.2:-62397821 | MS.gene23395:CDS |
| AACTTGAAGGCAAGGTTGAA+AGG | 0.525111 | 8.2:+62398047 | None:intergenic |
| GCAAGGTTGAAAGGCAGCCA+TGG | 0.525768 | 8.2:+62398056 | None:intergenic |
| ACAGGAGCAACCAATTCATT+GGG | 0.527994 | 8.2:-62397273 | MS.gene23395:CDS |
| TTTCATTAATATGAAGAAGA+GGG | 0.528838 | 8.2:+62398667 | None:intergenic |
| ATGACTCTTCGCATGTTGGC+CGG | 0.532150 | 8.2:-62397226 | MS.gene23395:CDS |
| GTTGTTCAAGACGTAGAGAA+AGG | 0.534039 | 8.2:-62400215 | MS.gene23395:CDS |
| ACAGTGTCATTGTTAAGTGT+TGG | 0.534962 | 8.2:-62397313 | MS.gene23395:CDS |
| TACAACTTCCTTTGTAGCTG+AGG | 0.542038 | 8.2:-62400318 | MS.gene23395:CDS |
| CTTCTCTCATTGGCAATGCA+AGG | 0.542900 | 8.2:-62399330 | MS.gene23395:CDS |
| GCAATGCAAGGAATATTTCG+AGG | 0.544019 | 8.2:-62399318 | MS.gene23395:CDS |
| CTATATGACTCTTCGCATGT+TGG | 0.550813 | 8.2:-62397230 | MS.gene23395:CDS |
| TCTTGAACAACATCACTCTC+AGG | 0.551396 | 8.2:+62400227 | None:intergenic |
| GCGACGAGGACTCTACAATT+CGG | 0.553070 | 8.2:-62397769 | MS.gene23395:CDS |
| AATGATAAGACTAATGGAGT+TGG | 0.553353 | 8.2:-62400116 | MS.gene23395:intron |
| AAACCTCTATTATATGTGAT+GGG | 0.553510 | 8.2:-62399674 | MS.gene23395:CDS |
| CTTATTGCTTCTAGGATCTG+AGG | 0.555325 | 8.2:+62399811 | None:intergenic |
| ATCCTTATATAGGTACATGA+TGG | 0.566341 | 8.2:-62398696 | MS.gene23395:intron |
| AGTATCTTCCTCAGCTACAA+AGG | 0.568544 | 8.2:+62400310 | None:intergenic |
| TTGTTCAAGACGTAGAGAAA+GGG | 0.571560 | 8.2:-62400214 | MS.gene23395:CDS |
| GCAGCAACAGCCAATGCAGA+AGG | 0.575324 | 8.2:+62401805 | None:intergenic |
| CCAGCAGCAGCAAGTTCCAC+GGG | 0.577018 | 8.2:+62400401 | None:intergenic |
| AAGGTTAGGTTCAATTCCCA+TGG | 0.577568 | 8.2:-62398073 | MS.gene23395:CDS |
| TAAGGATTGCTGCTTGTAGG+AGG | 0.579028 | 8.2:+62399708 | None:intergenic |
| TCCAGCAGCAGCAAGTTCCA+CGG | 0.580093 | 8.2:+62400400 | None:intergenic |
| TCTCCGCGAAAGAACCAGCT+AGG | 0.582309 | 8.2:+62397818 | None:intergenic |
| AGCTTGGTTGAACAAAGCAA+TGG | 0.583345 | 8.2:+62400373 | None:intergenic |
| GCTAACCAAACTTGAAGGCA+AGG | 0.585977 | 8.2:+62398039 | None:intergenic |
| GCCAATGAGAGAAGAACCGC+AGG | 0.586146 | 8.2:+62399339 | None:intergenic |
| AGGATGCTAACCAAACTTGA+AGG | 0.587300 | 8.2:+62398034 | None:intergenic |
| CAAGGTTGAAAGGCAGCCAT+GGG | 0.600303 | 8.2:+62398057 | None:intergenic |
| TAGATCATTTGGTGCTCCTG+CGG | 0.605070 | 8.2:-62399355 | MS.gene23395:CDS |
| GCATGTTGGCCGGTGTCTGG+AGG | 0.607189 | 8.2:-62397216 | MS.gene23395:CDS |
| ATGAAACAAATGGTACACTT+GGG | 0.613057 | 8.2:-62400142 | MS.gene23395:CDS |
| CTTTATCCGAATAGGCGCCC+CGG | 0.630951 | 8.2:-62397656 | MS.gene23395:intron |
| GAAGTTGTAATACTAACAAG+AGG | 0.634951 | 8.2:+62400332 | None:intergenic |
| AGGAGGTCTGTTGATGACAA+AGG | 0.636225 | 8.2:-62398142 | MS.gene23395:CDS |
| GGATCTGAGGATAGTAAATG+GGG | 0.639605 | 8.2:+62399824 | None:intergenic |
| GTTTACACCATCAAAGACAA+AGG | 0.650377 | 8.2:+62397497 | None:intergenic |
| GAAAAGTTACCTCCAGACAC+CGG | 0.676852 | 8.2:+62397207 | None:intergenic |
| AGACAACAGCAGCAGCGACG+AGG | 0.687152 | 8.2:-62397783 | MS.gene23395:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTTCATTAAATATATA+TGG | + | chr8.2:62397227-62397246 | None:intergenic | 10.0% |
| !! | ATAAAGTACATAAATAATTT+GGG | - | chr8.2:62399989-62400008 | MS.gene23395:intron | 10.0% |
| !! | ATTTGAATAATTATTTATGT+TGG | - | chr8.2:62400959-62400978 | MS.gene23395:intron | 10.0% |
| !! | CAAATATGTATTAAAAAAAT+AGG | - | chr8.2:62398468-62398487 | MS.gene23395:intron | 10.0% |
| !! | GATAAAAATAATATAATCAA+CGG | + | chr8.2:62399285-62399304 | None:intergenic | 10.0% |
| !! | GTATAATTTACTATAAATTA+TGG | + | chr8.2:62399549-62399568 | None:intergenic | 10.0% |
| !! | TATAAAGTACATAAATAATT+TGG | - | chr8.2:62399988-62400007 | MS.gene23395:intron | 10.0% |
| !! | TTCAATTTAAAAATAAGTAA+TGG | + | chr8.2:62400309-62400328 | None:intergenic | 10.0% |
| !!! | AATAAGTGAATTTTTATTTT+GGG | - | chr8.2:62397654-62397673 | MS.gene23395:intron | 10.0% |
| !!! | ACTTATTTTTAAATTGAAAA+TGG | - | chr8.2:62400311-62400330 | MS.gene23395:CDS | 10.0% |
| !!! | ATTAATTTTTTTTCGTAAAT+CGG | - | chr8.2:62400982-62401001 | MS.gene23395:intron | 10.0% |
| !!! | CTTATTTTTAAATTGAAAAT+GGG | - | chr8.2:62400312-62400331 | MS.gene23395:CDS | 10.0% |
| !!! | CTTTTAAAAAAAAAAAAAAC+CGG | + | chr8.2:62399911-62399930 | None:intergenic | 10.0% |
| !!! | TAATAAGTGAATTTTTATTT+TGG | - | chr8.2:62397653-62397672 | MS.gene23395:intron | 10.0% |
| !!! | TTTTAAAAAAAAAAAAAACC+GGG | + | chr8.2:62399910-62399929 | None:intergenic | 10.0% |
| !! | AAAAATCAAAATTTCAGAAT+TGG | + | chr8.2:62399189-62399208 | None:intergenic | 15.0% |
| !! | TTGATATACATATCTTAAAT+AGG | - | chr8.2:62398287-62398306 | MS.gene23395:intron | 15.0% |
| !! | TTTAAAAAAAAAAAAAACCG+GGG | + | chr8.2:62399909-62399928 | None:intergenic | 15.0% |
| !! | TTTACATAAATAAAATCCTT+AGG | - | chr8.2:62400586-62400605 | MS.gene23395:intron | 15.0% |
| !! | TTTATTTATTAATCGTGTTT+CGG | + | chr8.2:62398448-62398467 | None:intergenic | 15.0% |
| !!! | AAAAAATTAAAATTTTGCCA+AGG | + | chr8.2:62399249-62399268 | None:intergenic | 15.0% |
| !!! | AAAATTTTCCAATATAACAT+CGG | - | chr8.2:62400863-62400882 | MS.gene23395:intron | 15.0% |
| !!! | ATTTTGATTTTATATAGTTG+CGG | - | chr8.2:62400257-62400276 | MS.gene23395:CDS | 15.0% |
| !!! | TAGTTTTATTGTTTTTACTA+CGG | + | chr8.2:62397783-62397802 | None:intergenic | 15.0% |
| !!! | TATATCTAGTAATTTTTGTT+TGG | - | chr8.2:62401803-62401822 | MS.gene23395:CDS | 15.0% |
| !!! | TCATTTTTTTTTTCTTTTCA+AGG | + | chr8.2:62400630-62400649 | None:intergenic | 15.0% |
| !!! | TCTAACTTTTTTTTTTGAAA+AGG | + | chr8.2:62400079-62400098 | None:intergenic | 15.0% |
| !!! | TTTTGTTACTTTAATTATAG+TGG | - | chr8.2:62399711-62399730 | MS.gene23395:CDS | 15.0% |
| !! | AAATCAATGATATATAGAGA+CGG | + | chr8.2:62399092-62399111 | None:intergenic | 20.0% |
| !! | ACTCTCTACTTTATATATAT+AGG | - | chr8.2:62399737-62399756 | MS.gene23395:CDS | 20.0% |
| !! | AGTACACAAATAACTTTAAT+AGG | - | chr8.2:62399935-62399954 | MS.gene23395:intron | 20.0% |
| !! | ATATGATTAGAATATGATAG+TGG | - | chr8.2:62400150-62400169 | MS.gene23395:CDS | 20.0% |
| !! | ATATTCATTGAATGTGTTAT+TGG | - | chr8.2:62400281-62400300 | MS.gene23395:CDS | 20.0% |
| !! | ATTTGAATACCTTAAGTTAT+TGG | - | chr8.2:62400720-62400739 | MS.gene23395:intron | 20.0% |
| !! | CTCTCTACTTTATATATATA+GGG | - | chr8.2:62399738-62399757 | MS.gene23395:CDS | 20.0% |
| !! | GTAGTAAAAACAATAAAACT+AGG | - | chr8.2:62397782-62397801 | MS.gene23395:CDS | 20.0% |
| !! | GTATATTCGAATATAAATCA+TGG | + | chr8.2:62400417-62400436 | None:intergenic | 20.0% |
| !! | TAAGATTTACCAACAAAATT+AGG | + | chr8.2:62400380-62400399 | None:intergenic | 20.0% |
| !! | TATGTATATCAAACGATAAA+AGG | + | chr8.2:62398279-62398298 | None:intergenic | 20.0% |
| !! | TATTTGACATATAGATCATT+TGG | - | chr8.2:62399789-62399808 | MS.gene23395:CDS | 20.0% |
| !! | TTAAAAAAAAAAAAAACCGG+GGG | + | chr8.2:62399908-62399927 | None:intergenic | 20.0% |
| !! | TTAAGCATTTCAATTCAATA+TGG | + | chr8.2:62398249-62398268 | None:intergenic | 20.0% |
| !! | TTTCATTAATATGAAGAAGA+GGG | + | chr8.2:62400491-62400510 | None:intergenic | 20.0% |
| !!! | AAAAACTTGTTAGATAAACA+AGG | + | chr8.2:62400789-62400808 | None:intergenic | 20.0% |
| !!! | AATTCCATTCTTTTTAAAAC+CGG | + | chr8.2:62398636-62398655 | None:intergenic | 20.0% |
| !!! | AGTTTCAATCATAGTTTTAT+TGG | + | chr8.2:62397916-62397935 | None:intergenic | 20.0% |
| !!! | GATGTTATATTGGAAAATTT+TGG | + | chr8.2:62400864-62400883 | None:intergenic | 20.0% |
| !!! | TACAATTCGGTTTTATTTTA+GGG | - | chr8.2:62401399-62401418 | MS.gene23395:intron | 20.0% |
| !!! | TTATACTCTATTTTTGCAAA+AGG | - | chr8.2:62401547-62401566 | MS.gene23395:intron | 20.0% |
| !!! | TTTTCATTAATATGAAGAAG+AGG | + | chr8.2:62400492-62400511 | None:intergenic | 20.0% |
| !!! | TTTTGATTTTATATAGTTGC+GGG | - | chr8.2:62400258-62400277 | MS.gene23395:CDS | 20.0% |
| ! | AAACCTCTATTATATGTGAT+GGG | - | chr8.2:62399481-62399500 | MS.gene23395:intron | 25.0% |
| ! | AAATTGAAAATGGGCATAAA+AGG | - | chr8.2:62400321-62400340 | MS.gene23395:CDS | 25.0% |
| ! | AAGAAAAAAAAAATGAGCAG+AGG | - | chr8.2:62400634-62400653 | MS.gene23395:intron | 25.0% |
| ! | AATACTAACAAGAGGAAATA+TGG | + | chr8.2:62398818-62398837 | None:intergenic | 25.0% |
| ! | AATTAAAACAGTTATGTGTG+TGG | - | chr8.2:62399962-62399981 | MS.gene23395:intron | 25.0% |
| ! | ATCATACCAATGACATATAA+AGG | + | chr8.2:62399882-62399901 | None:intergenic | 25.0% |
| ! | ATGTCATAATCTGATAGAAT+CGG | + | chr8.2:62398530-62398549 | None:intergenic | 25.0% |
| ! | CAAAATTGTGATCCTTATAT+AGG | - | chr8.2:62400449-62400468 | MS.gene23395:intron | 25.0% |
| ! | GAAAATACTATCATTGATCT+AGG | - | chr8.2:62397708-62397727 | MS.gene23395:CDS | 25.0% |
| ! | GATTAAAAAATTTCAGCCTA+AGG | + | chr8.2:62400605-62400624 | None:intergenic | 25.0% |
| ! | GTTAAAAATTATTGTTAGCC+AGG | + | chr8.2:62397840-62397859 | None:intergenic | 25.0% |
| ! | TAAACCTCTATTATATGTGA+TGG | - | chr8.2:62399480-62399499 | MS.gene23395:intron | 25.0% |
| ! | TAGGTCTTCATATAGATTTA+TGG | - | chr8.2:62397496-62397515 | MS.gene23395:CDS | 25.0% |
| ! | TATTCAAATTTCTTACCACT+CGG | + | chr8.2:62400709-62400728 | None:intergenic | 25.0% |
| ! | TGATTGTTAAATGAGAAGTT+AGG | - | chr8.2:62397477-62397496 | MS.gene23395:CDS | 25.0% |
| ! | TTTGTTTGGTAAATTTATCC+AGG | - | chr8.2:62401817-62401836 | MS.gene23395:CDS | 25.0% |
| !! | AAAAACATGTGTGTTCATTT+TGG | - | chr8.2:62398180-62398199 | MS.gene23395:intron | 25.0% |
| !! | ACATATACCTAGTGTAATTT+TGG | - | chr8.2:62400183-62400202 | MS.gene23395:CDS | 25.0% |
| !! | ACTTTAAGCAACAATTTTTC+AGG | - | chr8.2:62397933-62397952 | MS.gene23395:intron | 25.0% |
| !! | ATCTGAAGATCTTTTATTCT+TGG | + | chr8.2:62400532-62400551 | None:intergenic | 25.0% |
| !! | GAAACAAAATTCTGATTTTG+TGG | + | chr8.2:62398149-62398168 | None:intergenic | 25.0% |
| !! | TAAAAGATCTTCAGATTTTC+AGG | - | chr8.2:62400536-62400555 | MS.gene23395:intron | 25.0% |
| !! | TTACATTTTCCTTTGTGTTT+AGG | - | chr8.2:62398730-62398749 | MS.gene23395:intron | 25.0% |
| !! | TTCTTTTTCCGATGTTATAT+TGG | + | chr8.2:62400874-62400893 | None:intergenic | 25.0% |
| !!! | ACAATTCGGTTTTATTTTAG+GGG | - | chr8.2:62401400-62401419 | MS.gene23395:intron | 25.0% |
| !!! | ACCTTAAGTTATTGGTTTAA+GGG | - | chr8.2:62400728-62400747 | MS.gene23395:intron | 25.0% |
| !!! | ATGTAGACTTATTTTCAAGT+TGG | - | chr8.2:62397292-62397311 | MS.gene23395:CDS | 25.0% |
| !!! | ATTTTCAGGTTTCTTAGAAA+TGG | - | chr8.2:62400550-62400569 | MS.gene23395:intron | 25.0% |
| !!! | CTACAATTCGGTTTTATTTT+AGG | - | chr8.2:62401398-62401417 | MS.gene23395:intron | 25.0% |
| !!! | TACCTTAAGTTATTGGTTTA+AGG | - | chr8.2:62400727-62400746 | MS.gene23395:intron | 25.0% |
| AAAAAAAAATGAGCAGAGGT+CGG | - | chr8.2:62400638-62400657 | MS.gene23395:intron | 30.0% | |
| AAAAAAATATTAGTCGCCAC+AGG | - | chr8.2:62400809-62400828 | MS.gene23395:intron | 30.0% | |
| AAAAAATATTAGTCGCCACA+GGG | - | chr8.2:62400810-62400829 | MS.gene23395:intron | 30.0% | |
| AACACTACCAAAATTACACT+AGG | + | chr8.2:62400193-62400212 | None:intergenic | 30.0% | |
| AACTTACTAGTAATTATGCC+TGG | - | chr8.2:62397819-62397838 | MS.gene23395:CDS | 30.0% | |
| AATGAAACAAATGGTACACT+TGG | - | chr8.2:62399012-62399031 | MS.gene23395:intron | 30.0% | |
| AATGATAAGACTAATGGAGT+TGG | - | chr8.2:62399039-62399058 | MS.gene23395:intron | 30.0% | |
| ACAACTCCTTTATATGTCAT+TGG | - | chr8.2:62399873-62399892 | MS.gene23395:intron | 30.0% | |
| ACATTAACTTCATAGCTGTA+TGG | - | chr8.2:62397441-62397460 | MS.gene23395:intron | 30.0% | |
| ACCCTTAAACCAATAACTTA+AGG | + | chr8.2:62400732-62400751 | None:intergenic | 30.0% | |
| AGATGTACTAAACATGATTG+CGG | + | chr8.2:62399217-62399236 | None:intergenic | 30.0% | |
| AGGAATATTTCGAGGATTTA+AGG | - | chr8.2:62399845-62399864 | MS.gene23395:CDS | 30.0% | |
| ATCCTTATATAGGTACATGA+TGG | - | chr8.2:62400459-62400478 | MS.gene23395:intron | 30.0% | |
| ATCTAATCCATAAAACCTAC+CGG | + | chr8.2:62401521-62401540 | None:intergenic | 30.0% | |
| ATGAAACAAATGGTACACTT+GGG | - | chr8.2:62399013-62399032 | MS.gene23395:intron | 30.0% | |
| CACTTTCAAAGGAGATATTA+GGG | - | chr8.2:62397318-62397337 | MS.gene23395:CDS | 30.0% | |
| CTATCATTGATCTAGGTAAA+AGG | - | chr8.2:62397715-62397734 | MS.gene23395:CDS | 30.0% | |
| GAAGAGAATAAATACCCAAA+TGG | + | chr8.2:62397415-62397434 | None:intergenic | 30.0% | |
| GAAGTTGTAATACTAACAAG+AGG | + | chr8.2:62398826-62398845 | None:intergenic | 30.0% | |
| GCTATGAAGTTAATGTGAAA+AGG | + | chr8.2:62397437-62397456 | None:intergenic | 30.0% | |
| GCTTGGTTAAACTTAAAAGT+TGG | + | chr8.2:62397537-62397556 | None:intergenic | 30.0% | |
| GGATAAAGTGTATAACTTGA+AGG | + | chr8.2:62401487-62401506 | None:intergenic | 30.0% | |
| GTACATCTTAAAATTCTCCT+TGG | - | chr8.2:62399229-62399248 | MS.gene23395:intron | 30.0% | |
| GTTATACACTTTATCCGAAT+AGG | - | chr8.2:62401491-62401510 | MS.gene23395:intron | 30.0% | |
| GTTGGATTTGGATTATACTT+TGG | - | chr8.2:62401440-62401459 | MS.gene23395:intron | 30.0% | |
| TAACTTTCTCAAAATCACTG+TGG | + | chr8.2:62399613-62399632 | None:intergenic | 30.0% | |
| TCTTTGTCGCATTTATCTTA+TGG | - | chr8.2:62401294-62401313 | MS.gene23395:intron | 30.0% | |
| TGTCATAATCTGATAGAATC+GGG | + | chr8.2:62398529-62398548 | None:intergenic | 30.0% | |
| TTCGTAAATCGGTTAATTAC+AGG | - | chr8.2:62400993-62401012 | MS.gene23395:intron | 30.0% | |
| TTCTTCGTTATTGCATATGA+GGG | - | chr8.2:62401260-62401279 | MS.gene23395:intron | 30.0% | |
| TTTCTTCGTTATTGCATATG+AGG | - | chr8.2:62401259-62401278 | MS.gene23395:intron | 30.0% | |
| ! | AATTTTGCTAACACTCTCTT+TGG | - | chr8.2:62397566-62397585 | MS.gene23395:intron | 30.0% |
| ! | ACAAAGGCTAATGTATTGAT+TGG | + | chr8.2:62401645-62401664 | None:intergenic | 30.0% |
| ! | ATATGTTGAATTGGTCTATC+CGG | - | chr8.2:62398614-62398633 | MS.gene23395:CDS | 30.0% |
| ! | GTGTATAACTTGAAGGTTTT+TGG | + | chr8.2:62401480-62401499 | None:intergenic | 30.0% |
| ! | TCAGTAAGTCCTAATTTTGT+TGG | - | chr8.2:62400368-62400387 | MS.gene23395:CDS | 30.0% |
| ! | TGAAGATCTTTTATTCTTGG+AGG | + | chr8.2:62400529-62400548 | None:intergenic | 30.0% |
| ! | TTCTGATTTTGTGGCATTAT+TGG | + | chr8.2:62398140-62398159 | None:intergenic | 30.0% |
| !!! | CTATCCGGTTTTAAAAAGAA+TGG | - | chr8.2:62398629-62398648 | MS.gene23395:CDS | 30.0% |
| !!! | GAATTGGTGCTGTAAAATTT+TGG | + | chr8.2:62399173-62399192 | None:intergenic | 30.0% |
| AAGCATAAACATATGACTGC+TGG | - | chr8.2:62400025-62400044 | MS.gene23395:intron | 35.0% | |
| AATCATGACTCAAAGCTCAA+AGG | + | chr8.2:62398403-62398422 | None:intergenic | 35.0% | |
| ACACCCATCACATATAATAG+AGG | + | chr8.2:62399487-62399506 | None:intergenic | 35.0% | |
| AGGATCTGAGGATAGTAAAT+GGG | + | chr8.2:62399335-62399354 | None:intergenic | 35.0% | |
| ATATATAGAGACGGAAAGAG+AGG | + | chr8.2:62399083-62399102 | None:intergenic | 35.0% | |
| ATGGAATTGCGTCCTAATAA+AGG | - | chr8.2:62398648-62398667 | MS.gene23395:CDS | 35.0% | |
| CAAGCAGCAATCCTTATATT+TGG | - | chr8.2:62399454-62399473 | MS.gene23395:intron | 35.0% | |
| CAATCCATATCCCAATGAAT+TGG | + | chr8.2:62401895-62401914 | None:intergenic | 35.0% | |
| CTCGGTTCAATATGTTGAAT+TGG | - | chr8.2:62398605-62398624 | MS.gene23395:intron | 35.0% | |
| CTCTCTGTTATTGTTGGATT+TGG | - | chr8.2:62401428-62401447 | MS.gene23395:intron | 35.0% | |
| CTGAGGAAGATACTATCAAA+AGG | - | chr8.2:62398854-62398873 | MS.gene23395:CDS | 35.0% | |
| CTTATTGACACAGCATTCAT+AGG | - | chr8.2:62397389-62397408 | MS.gene23395:intron | 35.0% | |
| GATGTACTAAACATGATTGC+GGG | + | chr8.2:62399216-62399235 | None:intergenic | 35.0% | |
| GATTGAATCAACCGACATAT+TGG | - | chr8.2:62398576-62398595 | MS.gene23395:intron | 35.0% | |
| GCACTTTCAAAGGAGATATT+AGG | - | chr8.2:62397317-62397336 | MS.gene23395:CDS | 35.0% | |
| GCATGAAAACTGAATTACCA+AGG | + | chr8.2:62401718-62401737 | None:intergenic | 35.0% | |
| GGGAACAATGATAAGACTAA+TGG | - | chr8.2:62399033-62399052 | MS.gene23395:intron | 35.0% | |
| GTAAATCGGTTAATTACAGG+AGG | - | chr8.2:62400996-62401015 | MS.gene23395:intron | 35.0% | |
| GTAGATGTTTGATATCACGA+TGG | + | chr8.2:62399686-62399705 | None:intergenic | 35.0% | |
| GTAGGACACAATGAAACAAA+TGG | - | chr8.2:62399003-62399022 | MS.gene23395:intron | 35.0% | |
| GTGTAGAATTTCTACTGTAC+AGG | - | chr8.2:62401864-62401883 | MS.gene23395:intron | 35.0% | |
| GTGTCAATAAGAGAAGCAAT+AGG | + | chr8.2:62397380-62397399 | None:intergenic | 35.0% | |
| GTTTACACCATCAAAGACAA+AGG | + | chr8.2:62401661-62401680 | None:intergenic | 35.0% | |
| TAAGGCTCAAAAAGAATCTG+TGG | - | chr8.2:62398981-62399000 | MS.gene23395:intron | 35.0% | |
| TAGGATCTGAGGATAGTAAA+TGG | + | chr8.2:62399336-62399355 | None:intergenic | 35.0% | |
| TATATAGAGACGGAAAGAGA+GGG | + | chr8.2:62399082-62399101 | None:intergenic | 35.0% | |
| TATGTCAAATACTTCACTGC+TGG | + | chr8.2:62399780-62399799 | None:intergenic | 35.0% | |
| TCCTAGAAGCAATAAGAGTA+AGG | - | chr8.2:62399351-62399370 | MS.gene23395:CDS | 35.0% | |
| TCCTTACTCTTATTGCTTCT+AGG | + | chr8.2:62399355-62399374 | None:intergenic | 35.0% | |
| TCTAATCCATAAAACCTACC+GGG | + | chr8.2:62401520-62401539 | None:intergenic | 35.0% | |
| TGCATATGCTTCATATTCCT+TGG | - | chr8.2:62401698-62401717 | MS.gene23395:intron | 35.0% | |
| TGCCATCATGTACCTATATA+AGG | + | chr8.2:62400464-62400483 | None:intergenic | 35.0% | |
| TTAACAATGACACTGTAACC+TGG | + | chr8.2:62401838-62401857 | None:intergenic | 35.0% | |
| TTGCTCGTTCTTTATGATTC+AGG | - | chr8.2:62401231-62401250 | MS.gene23395:intron | 35.0% | |
| TTGTTCAAGACGTAGAGAAA+GGG | - | chr8.2:62398941-62398960 | MS.gene23395:intron | 35.0% | |
| TTTCTTACCACTCGGATAAA+TGG | + | chr8.2:62400701-62400720 | None:intergenic | 35.0% | |
| ! | ACAGTGTCATTGTTAAGTGT+TGG | - | chr8.2:62401842-62401861 | MS.gene23395:CDS | 35.0% |
| ! | ATATAAGGATTGCTGCTTGT+AGG | + | chr8.2:62399453-62399472 | None:intergenic | 35.0% |
| ! | GAGGTTTAGCTCCAAATATA+AGG | + | chr8.2:62399468-62399487 | None:intergenic | 35.0% |
| ! | GATCTTTTATTCTTGGAGGT+AGG | + | chr8.2:62400525-62400544 | None:intergenic | 35.0% |
| ! | GCTTTGAGTCATGATTCAAT+TGG | - | chr8.2:62398407-62398426 | MS.gene23395:intron | 35.0% |
| !! | ACATTAGCCTTTGTCTTTGA+TGG | - | chr8.2:62401651-62401670 | MS.gene23395:intron | 35.0% |
| !! | ATATGGTGATCTTTGAAGCT+TGG | + | chr8.2:62398801-62398820 | None:intergenic | 35.0% |
| !! | ATTGGAAAATTTTGGCCTCT+CGG | + | chr8.2:62400856-62400875 | None:intergenic | 35.0% |
| !! | CGATCTTTAACTTTTGCAGA+CGG | - | chr8.2:62400753-62400772 | MS.gene23395:intron | 35.0% |
| !! | CTTATGGTTTGTCGATTTAC+AGG | - | chr8.2:62401310-62401329 | MS.gene23395:intron | 35.0% |
| !! | GTCTTTGATGGTGTAAACTA+TGG | - | chr8.2:62401663-62401682 | MS.gene23395:intron | 35.0% |
| !! | GTGTAGGAGTATCCTTTATT+AGG | + | chr8.2:62398663-62398682 | None:intergenic | 35.0% |
| !! | TGAGCCTTATTACTCTCTTT+GGG | + | chr8.2:62398970-62398989 | None:intergenic | 35.0% |
| !! | TTGAGCCTTATTACTCTCTT+TGG | + | chr8.2:62398971-62398990 | None:intergenic | 35.0% |
| !! | TTTGGATTATACTTTGGAGC+TGG | - | chr8.2:62401446-62401465 | MS.gene23395:intron | 35.0% |
| !!! | ATTCGGTTTTATTTTAGGGG+CGG | - | chr8.2:62401403-62401422 | MS.gene23395:intron | 35.0% |
| !!! | TTGGTGCTGTAAAATTTTGG+AGG | + | chr8.2:62399170-62399189 | None:intergenic | 35.0% |
| AAAGGATACTCCTACACCAT+CGG | - | chr8.2:62398666-62398685 | MS.gene23395:CDS | 40.0% | |
| AACTTGAAGGCAAGGTTGAA+AGG | + | chr8.2:62401111-62401130 | None:intergenic | 40.0% | |
| AAGGTTAGGTTCAATTCCCA+TGG | - | chr8.2:62401082-62401101 | MS.gene23395:intron | 40.0% | |
| ACAGCATTCATAGGCCATTT+GGG | - | chr8.2:62397398-62397417 | MS.gene23395:intron | 40.0% | |
| ACAGGAGCAACCAATTCATT+GGG | - | chr8.2:62401882-62401901 | MS.gene23395:intron | 40.0% | |
| ACTCTCTTGAGAGTTGAAAC+AGG | + | chr8.2:62398071-62398090 | None:intergenic | 40.0% | |
| AGCTTGGTTGAACAAAGCAA+TGG | + | chr8.2:62398785-62398804 | None:intergenic | 40.0% | |
| AGGATGCTAACCAAACTTGA+AGG | + | chr8.2:62401124-62401143 | None:intergenic | 40.0% | |
| AGTATCTTCCTCAGCTACAA+AGG | + | chr8.2:62398848-62398867 | None:intergenic | 40.0% | |
| ATATAGAGACGGAAAGAGAG+GGG | + | chr8.2:62399081-62399100 | None:intergenic | 40.0% | |
| CATGCGAAGAGTCATATAGA+TGG | + | chr8.2:62401924-62401943 | None:intergenic | 40.0% | |
| CTAATCCATAAAACCTACCG+GGG | + | chr8.2:62401519-62401538 | None:intergenic | 40.0% | |
| CTATATGACTCTTCGCATGT+TGG | - | chr8.2:62401925-62401944 | MS.gene23395:intron | 40.0% | |
| CTCTCTTGAGAGTTGAAACA+GGG | + | chr8.2:62398070-62398089 | None:intergenic | 40.0% | |
| GACACCCAAAGAGAGTAATA+AGG | - | chr8.2:62398963-62398982 | MS.gene23395:intron | 40.0% | |
| GATTGCAATACCTTCTGCAT+TGG | - | chr8.2:62397340-62397359 | MS.gene23395:intron | 40.0% | |
| GCAAAATTAATCACAGCGCT+TGG | + | chr8.2:62397554-62397573 | None:intergenic | 40.0% | |
| GCAACCAATTCATTGGGATA+TGG | - | chr8.2:62401888-62401907 | MS.gene23395:intron | 40.0% | |
| GCAATGCAAGGAATATTTCG+AGG | - | chr8.2:62399837-62399856 | MS.gene23395:CDS | 40.0% | |
| GCTCAAAAAGAATCTGTGGT+AGG | - | chr8.2:62398985-62399004 | MS.gene23395:intron | 40.0% | |
| GGATCTGAGGATAGTAAATG+GGG | + | chr8.2:62399334-62399353 | None:intergenic | 40.0% | |
| GTTACTCCCAACAAAGTTTG+TGG | + | chr8.2:62398118-62398137 | None:intergenic | 40.0% | |
| GTTGTTCAAGACGTAGAGAA+AGG | - | chr8.2:62398940-62398959 | MS.gene23395:intron | 40.0% | |
| TACAACTTCCTTTGTAGCTG+AGG | - | chr8.2:62398837-62398856 | MS.gene23395:CDS | 40.0% | |
| TACAGGAGCAACCAATTCAT+TGG | - | chr8.2:62401881-62401900 | MS.gene23395:intron | 40.0% | |
| TCTTGAACAACATCACTCTC+AGG | + | chr8.2:62398931-62398950 | None:intergenic | 40.0% | |
| TGAATCAACCGACATATTGG+CGG | - | chr8.2:62398579-62398598 | MS.gene23395:intron | 40.0% | |
| TGTGACTTTAGCAGCAAGTT+TGG | - | chr8.2:62401055-62401074 | MS.gene23395:intron | 40.0% | |
| ! | CAAGTTGGATGCACTTTCAA+AGG | - | chr8.2:62397307-62397326 | MS.gene23395:CDS | 40.0% |
| ! | CTACTCTTTGGCTCAATTCT+TGG | - | chr8.2:62399424-62399443 | MS.gene23395:intron | 40.0% |
| ! | TCATTGGTATGATTTTCCCC+CGG | - | chr8.2:62399889-62399908 | MS.gene23395:intron | 40.0% |
| ! | TTCAACCTTGCCTTCAAGTT+TGG | - | chr8.2:62401111-62401130 | MS.gene23395:intron | 40.0% |
| !! | ACGATGGATTGTCAGAATCA+CGG | + | chr8.2:62399670-62399689 | None:intergenic | 40.0% |
| !! | CTTATTGCTTCTAGGATCTG+AGG | + | chr8.2:62399347-62399366 | None:intergenic | 40.0% |
| !!! | TTCACTGCTGGTTTTAGCAT+TGG | + | chr8.2:62399768-62399787 | None:intergenic | 40.0% |
| !!! | TTCGGTTTTATTTTAGGGGC+GGG | - | chr8.2:62401404-62401423 | MS.gene23395:intron | 40.0% |
| AAGTTTGCATGTCTACCCTG+TGG | + | chr8.2:62400828-62400847 | None:intergenic | 45.0% | |
| ATGCAAACTTGACTTCCGAG+AGG | - | chr8.2:62400838-62400857 | MS.gene23395:intron | 45.0% | |
| CAATCCATCAGCAAAAAGCG+AGG | + | chr8.2:62401144-62401163 | None:intergenic | 45.0% | |
| CACAGCATTCATAGGCCATT+TGG | - | chr8.2:62397397-62397416 | MS.gene23395:intron | 45.0% | |
| CAGCATACCATTTATCCGAG+TGG | - | chr8.2:62400691-62400710 | MS.gene23395:intron | 45.0% | |
| CTTCTCTCATTGGCAATGCA+AGG | - | chr8.2:62399825-62399844 | MS.gene23395:CDS | 45.0% | |
| GAATCAACCGACATATTGGC+GGG | - | chr8.2:62398580-62398599 | MS.gene23395:intron | 45.0% | |
| GATTTACAGGCAATCCTAGC+TGG | - | chr8.2:62401323-62401342 | MS.gene23395:intron | 45.0% | |
| GCATCAACAGCACTACTCTT+TGG | - | chr8.2:62399412-62399431 | MS.gene23395:intron | 45.0% | |
| GCTAACCAAACTTGAAGGCA+AGG | + | chr8.2:62401119-62401138 | None:intergenic | 45.0% | |
| GTTGTGTTGCAGCTACAATC+TGG | + | chr8.2:62401623-62401642 | None:intergenic | 45.0% | |
| TATAGAGACGGAAAGAGAGG+GGG | + | chr8.2:62399080-62399099 | None:intergenic | 45.0% | |
| ! | AATCCTAGCTGGTTCTTTCG+CGG | - | chr8.2:62401334-62401353 | MS.gene23395:intron | 45.0% |
| ! | TAAGGATTGCTGCTTGTAGG+AGG | + | chr8.2:62399450-62399469 | None:intergenic | 45.0% |
| !! | AGGAGGTCTGTTGATGACAA+AGG | - | chr8.2:62401013-62401032 | MS.gene23395:intron | 45.0% |
| !! | TAGATCATTTGGTGCTCCTG+CGG | - | chr8.2:62399800-62399819 | MS.gene23395:CDS | 45.0% |
| !! | TGGATTGGCTATAGCTGTAC+AGG | - | chr8.2:62401157-62401176 | MS.gene23395:intron | 45.0% |
| !!! | CTCGCTTTTTGCTGATGGAT+TGG | - | chr8.2:62401142-62401161 | MS.gene23395:intron | 45.0% |
| !!! | TCGGTTTTATTTTAGGGGCG+GGG | - | chr8.2:62401405-62401424 | MS.gene23395:intron | 45.0% |
| !! | AAAAAAAAAAAAATTAAACA+AGG | + | chr8.2:62401741-62401760 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAATTAAACAA+GGG | + | chr8.2:62401740-62401759 | None:intergenic | 5.0% |
| !! | ATAATTTATAGTAAATTATA+CGG | - | chr8.2:62399548-62399567 | MS.gene23395:intron | 5.0% |
| ATAGAGACGGAAAGAGAGGG+GGG | + | chr8.2:62399079-62399098 | None:intergenic | 50.0% | |
| ATGACTCTTCGCATGTTGGC+CGG | - | chr8.2:62401929-62401948 | MS.gene23395:intron | 50.0% | |
| CAACCGATTGAAGCAAACCG+CGG | - | chr8.2:62398498-62398517 | MS.gene23395:intron | 50.0% | |
| CAAGGTTGAAAGGCAGCCAT+GGG | + | chr8.2:62401101-62401120 | None:intergenic | 50.0% | |
| GCAAGTTTGGCTGCAAGGTT+AGG | - | chr8.2:62401068-62401087 | MS.gene23395:intron | 50.0% | |
| GCGACGAGGACTCTACAATT+CGG | - | chr8.2:62401386-62401405 | MS.gene23395:intron | 50.0% | |
| GCGGCACCACAAACTTTGTT+GGG | - | chr8.2:62398109-62398128 | MS.gene23395:CDS | 50.0% | |
| TAGCAGCAAGTTTGGCTGCA+AGG | - | chr8.2:62401063-62401082 | MS.gene23395:intron | 50.0% | |
| TCCACGGGACCTAAACACAA+AGG | + | chr8.2:62398742-62398761 | None:intergenic | 50.0% | |
| TCCTGCGGTTCTTCTCTCAT+TGG | - | chr8.2:62399815-62399834 | MS.gene23395:CDS | 50.0% | |
| TCCTTTGTGTTTAGGTCCCG+TGG | - | chr8.2:62398738-62398757 | MS.gene23395:intron | 50.0% | |
| ! | GAACCGCGGTTTGCTTCAAT+CGG | + | chr8.2:62398504-62398523 | None:intergenic | 50.0% |
| !! | GATAGAATCGGGTTGAACCG+CGG | + | chr8.2:62398518-62398537 | None:intergenic | 50.0% |
| !!! | GCATCCTCGCTTTTTGCTGA+TGG | - | chr8.2:62401137-62401156 | MS.gene23395:intron | 50.0% |
| CCGAGAACCCGCCAATATGT+CGG | + | chr8.2:62398590-62398609 | None:intergenic | 55.0% | |
| CGCGGCACCACAAACTTTGT+TGG | - | chr8.2:62398108-62398127 | MS.gene23395:CDS | 55.0% | |
| CTTTATCCGAATAGGCGCCC+CGG | - | chr8.2:62401499-62401518 | MS.gene23395:intron | 55.0% | |
| GCAAGGTTGAAAGGCAGCCA+TGG | + | chr8.2:62401102-62401121 | None:intergenic | 55.0% | |
| GCAGCAACAGCCAATGCAGA+AGG | + | chr8.2:62397353-62397372 | None:intergenic | 55.0% | |
| GCCAATGAGAGAAGAACCGC+AGG | + | chr8.2:62399819-62399838 | None:intergenic | 55.0% | |
| GCGGGGCTCTCTGTTATTGT+TGG | - | chr8.2:62401422-62401441 | MS.gene23395:intron | 55.0% | |
| TCACCGACCACCAAGTTTCG+CGG | - | chr8.2:62398090-62398109 | MS.gene23395:CDS | 55.0% | |
| TCCAGCAGCAGCAAGTTCCA+CGG | + | chr8.2:62398758-62398777 | None:intergenic | 55.0% | |
| TCTCCGCGAAAGAACCAGCT+AGG | + | chr8.2:62401340-62401359 | None:intergenic | 55.0% | |
| ! | CGCGGTTTGCTTCAATCGGT+TGG | + | chr8.2:62398500-62398519 | None:intergenic | 55.0% |
| !! | CCGACATATTGGCGGGTTCT+CGG | - | chr8.2:62398587-62398606 | MS.gene23395:intron | 55.0% |
| !! | GTTTGTGGTGCCGCGAAACT+TGG | + | chr8.2:62398103-62398122 | None:intergenic | 55.0% |
| AGACAACAGCAGCAGCGACG+AGG | - | chr8.2:62401372-62401391 | MS.gene23395:intron | 60.0% | |
| CCAGCAGCAGCAAGTTCCAC+GGG | + | chr8.2:62398757-62398776 | None:intergenic | 60.0% | |
| CTCTTCGCGTTGCTAGCCGA+TGG | + | chr8.2:62398685-62398704 | None:intergenic | 60.0% | |
| GCGTTGCTAGCCGATGGTGT+AGG | + | chr8.2:62398679-62398698 | None:intergenic | 60.0% | |
| TTCGCATGTTGGCCGGTGTC+TGG | - | chr8.2:62401936-62401955 | MS.gene23395:intron | 60.0% | |
| ! | AACCTACCGGGGCGCCTATT+CGG | + | chr8.2:62401508-62401527 | None:intergenic | 60.0% |
| ! | AGGCGCCCCGGTAGGTTTTA+TGG | - | chr8.2:62401511-62401530 | MS.gene23395:intron | 60.0% |
| ! | GTGCCGCGAAACTTGGTGGT+CGG | + | chr8.2:62398096-62398115 | None:intergenic | 60.0% |
| !! | TGTGGTGCCGCGAAACTTGG+TGG | + | chr8.2:62398100-62398119 | None:intergenic | 60.0% |
| ATCCGAATAGGCGCCCCGGT+AGG | - | chr8.2:62401503-62401522 | MS.gene23395:intron | 65.0% | |
| GCATGTTGGCCGGTGTCTGG+AGG | - | chr8.2:62401939-62401958 | MS.gene23395:intron | 65.0% | |
| !! | CCCGTGGAACTTGCTGCTGC+TGG | - | chr8.2:62398754-62398773 | MS.gene23395:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 62397213 | 62401964 | 62397213 | ID=MS.gene23395 |
| chr8.2 | mRNA | 62397213 | 62401964 | 62397213 | ID=MS.gene23395.t1;Parent=MS.gene23395 |
| chr8.2 | exon | 62401960 | 62401964 | 62401960 | ID=MS.gene23395.t1.exon1;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62401960 | 62401964 | 62401960 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| chr8.2 | exon | 62401758 | 62401879 | 62401758 | ID=MS.gene23395.t1.exon2;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62401758 | 62401879 | 62401758 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| chr8.2 | exon | 62400117 | 62400425 | 62400117 | ID=MS.gene23395.t1.exon3;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62400117 | 62400425 | 62400117 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| chr8.2 | exon | 62399664 | 62399866 | 62399664 | ID=MS.gene23395.t1.exon4;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62399664 | 62399866 | 62399664 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| chr8.2 | exon | 62399283 | 62399418 | 62399283 | ID=MS.gene23395.t1.exon5;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62399283 | 62399418 | 62399283 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| chr8.2 | exon | 62398807 | 62398903 | 62398807 | ID=MS.gene23395.t1.exon6;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62398807 | 62398903 | 62398807 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| chr8.2 | exon | 62398606 | 62398706 | 62398606 | ID=MS.gene23395.t1.exon7;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62398606 | 62398706 | 62398606 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| chr8.2 | exon | 62397999 | 62398162 | 62397999 | ID=MS.gene23395.t1.exon8;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62397999 | 62398162 | 62397999 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| chr8.2 | exon | 62397657 | 62397845 | 62397657 | ID=MS.gene23395.t1.exon9;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62397657 | 62397845 | 62397657 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| chr8.2 | exon | 62397458 | 62397553 | 62397458 | ID=MS.gene23395.t1.exon10;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62397458 | 62397553 | 62397458 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| chr8.2 | exon | 62397213 | 62397338 | 62397213 | ID=MS.gene23395.t1.exon11;Parent=MS.gene23395.t1 |
| chr8.2 | CDS | 62397213 | 62397338 | 62397213 | ID=cds.MS.gene23395.t1;Parent=MS.gene23395.t1 |
| Gene Sequence |
| Protein sequence |
