Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31105.t1 | AFL69846.1 | 99.1 | 461 | 4 | 0 | 1 | 461 | 47 | 507 | 6.60E-245 | 856.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31105.t1 | Q9SYD6 | 71.3 | 471 | 125 | 4 | 1 | 461 | 45 | 515 | 2.8e-175 | 616.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31105.t1 | I3Y0W7 | 99.1 | 461 | 4 | 0 | 1 | 461 | 47 | 507 | 4.8e-245 | 856.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene31105 | 0.802207 | 6.26E-49 | -1.69E-46 |
| MS.gene049232 | MS.gene31105 | 0.867801 | 1.05E-65 | -1.69E-46 |
| MS.gene049633 | MS.gene31105 | 0.811409 | 7.10E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene31105 | 0.865249 | 6.77E-65 | -1.69E-46 |
| MS.gene049657 | MS.gene31105 | 0.860525 | 1.94E-63 | -1.69E-46 |
| MS.gene049865 | MS.gene31105 | 0.812158 | 4.88E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene31105 | 0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene31105 | 0.869367 | 3.27E-66 | -1.69E-46 |
| MS.gene050216 | MS.gene31105 | 0.823478 | 1.36E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene31105 | 0.845165 | 4.81E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene31105 | 0.84294 | 1.90E-58 | -1.69E-46 |
| MS.gene050502 | MS.gene31105 | 0.824875 | 6.37E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene31105 | 0.815251 | 1.02E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene31105 | 0.808979 | 2.37E-50 | -1.69E-46 |
| MS.gene050697 | MS.gene31105 | 0.833082 | 6.54E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene31105 | 0.802419 | 5.66E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene31105 | 0.871112 | 8.76E-67 | -1.69E-46 |
| MS.gene050871 | MS.gene31105 | 0.871534 | 6.35E-67 | -1.69E-46 |
| MS.gene050904 | MS.gene31105 | 0.826189 | 3.11E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene31105 | 0.800258 | 1.57E-48 | -1.69E-46 |
| MS.gene051268 | MS.gene31105 | 0.80545 | 1.33E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene31105 | 0.852156 | 5.55E-61 | -1.69E-46 |
| MS.gene052066 | MS.gene31105 | 0.922412 | 1.02E-88 | -1.69E-46 |
| MS.gene052164 | MS.gene31105 | 0.819103 | 1.38E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene31105 | 0.818764 | 1.65E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene31105 | 0.823315 | 1.48E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene31105 | 0.828359 | 9.40E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene31105 | 0.821985 | 3.02E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene31105 | 0.813405 | 2.60E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene31105 | 0.84124 | 5.36E-58 | -1.69E-46 |
| MS.gene053633 | MS.gene31105 | 0.84805 | 7.84E-60 | -1.69E-46 |
| MS.gene054003 | MS.gene31105 | 0.819508 | 1.12E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene31105 | 0.80794 | 3.95E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene31105 | 0.808479 | 3.03E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene31105 | 0.811114 | 8.23E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene31105 | 0.845134 | 4.91E-59 | -1.69E-46 |
| MS.gene056046 | MS.gene31105 | 0.807463 | 4.99E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene31105 | 0.816513 | 5.32E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene31105 | 0.829797 | 4.21E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene31105 | 0.861327 | 1.11E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene31105 | 0.839844 | 1.24E-57 | -1.69E-46 |
| MS.gene056878 | MS.gene31105 | 0.871682 | 5.67E-67 | -1.69E-46 |
| MS.gene057086 | MS.gene31105 | 0.825916 | 3.61E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene31105 | 0.873739 | 1.16E-67 | -1.69E-46 |
| MS.gene057734 | MS.gene31105 | 0.804058 | 2.59E-49 | -1.69E-46 |
| MS.gene057872 | MS.gene31105 | 0.859077 | 5.31E-63 | -1.69E-46 |
| MS.gene057876 | MS.gene31105 | 0.808279 | 3.35E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene31105 | 0.824911 | 6.25E-54 | -1.69E-46 |
| MS.gene058041 | MS.gene31105 | 0.818917 | 1.53E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene31105 | 0.822593 | 2.18E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene31105 | -0.839109 | 1.93E-57 | -1.69E-46 |
| MS.gene058173 | MS.gene31105 | -0.83994 | 1.17E-57 | -1.69E-46 |
| MS.gene058175 | MS.gene31105 | -0.839195 | 1.83E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene31105 | 0.804626 | 1.97E-49 | -1.69E-46 |
| MS.gene059045 | MS.gene31105 | -0.832217 | 1.07E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene31105 | 0.820905 | 5.36E-53 | -1.69E-46 |
| MS.gene059517 | MS.gene31105 | 0.816558 | 5.20E-52 | -1.69E-46 |
| MS.gene059837 | MS.gene31105 | 0.825272 | 5.13E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene31105 | 0.857849 | 1.23E-62 | -1.69E-46 |
| MS.gene05995 | MS.gene31105 | 0.835699 | 1.44E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene31105 | 0.857894 | 1.20E-62 | -1.69E-46 |
| MS.gene06000 | MS.gene31105 | 0.834645 | 2.66E-56 | -1.69E-46 |
| MS.gene060187 | MS.gene31105 | -0.840198 | 1.00E-57 | -1.69E-46 |
| MS.gene060295 | MS.gene31105 | 0.813746 | 2.19E-51 | -1.69E-46 |
| MS.gene060339 | MS.gene31105 | 0.824352 | 8.45E-54 | -1.69E-46 |
| MS.gene060482 | MS.gene31105 | 0.801891 | 7.27E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene31105 | -0.820292 | 7.41E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene31105 | -0.877141 | 7.97E-69 | -1.69E-46 |
| MS.gene060762 | MS.gene31105 | 0.813675 | 2.27E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene31105 | 0.886891 | 2.31E-72 | -1.69E-46 |
| MS.gene06077 | MS.gene31105 | 0.814157 | 1.78E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene31105 | 0.827923 | 1.20E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene31105 | 0.849344 | 3.44E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31105 | MS.gene016686 | PPI |
| MS.gene31105 | MS.gene23590 | PPI |
| MS.gene31105 | MS.gene23394 | PPI |
| MS.gene31105 | MS.gene23395 | PPI |
| MS.gene31105 | MS.gene23591 | PPI |
| MS.gene31105 | MS.gene42884 | PPI |
| MS.gene31105 | MS.gene60481 | PPI |
| MS.gene31105 | MS.gene98678 | PPI |
| MS.gene31105 | MS.gene024346 | PPI |
| MS.gene31105 | MS.gene86725 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31105.t1 | MTR_2g097900 | 97.831 | 461 | 10 | 0 | 1 | 461 | 47 | 507 | 0.0 | 900 |
| MS.gene31105.t1 | MTR_2g097900 | 96.508 | 315 | 11 | 0 | 1 | 315 | 47 | 361 | 0.0 | 607 |
| MS.gene31105.t1 | MTR_3g029510 | 59.470 | 491 | 165 | 3 | 1 | 460 | 48 | 535 | 0.0 | 565 |
| MS.gene31105.t1 | MTR_8g037175 | 55.645 | 496 | 185 | 4 | 1 | 461 | 32 | 527 | 0.0 | 530 |
| MS.gene31105.t1 | MTR_8g036660 | 57.258 | 496 | 172 | 4 | 1 | 460 | 115 | 606 | 0.0 | 528 |
| MS.gene31105.t1 | MTR_8g037170 | 57.258 | 496 | 172 | 4 | 1 | 460 | 47 | 538 | 0.0 | 527 |
| MS.gene31105.t1 | MTR_8g037170 | 55.403 | 509 | 174 | 4 | 1 | 460 | 47 | 551 | 0.0 | 525 |
| MS.gene31105.t1 | MTR_5g099020 | 43.297 | 455 | 223 | 3 | 6 | 460 | 130 | 549 | 2.31e-121 | 365 |
| MS.gene31105.t1 | MTR_5g099020 | 43.202 | 456 | 224 | 3 | 6 | 461 | 130 | 550 | 1.06e-120 | 365 |
| MS.gene31105.t1 | MTR_7g070210 | 43.288 | 365 | 173 | 2 | 6 | 367 | 133 | 466 | 5.10e-86 | 272 |
| MS.gene31105.t1 | MTR_4g071390 | 25.708 | 459 | 272 | 14 | 5 | 449 | 110 | 513 | 1.40e-18 | 88.6 |
| MS.gene31105.t1 | MTR_4g071445 | 24.236 | 458 | 287 | 11 | 7 | 454 | 123 | 530 | 1.28e-17 | 85.9 |
| MS.gene31105.t1 | MTR_4g071370 | 25.486 | 463 | 275 | 15 | 7 | 454 | 125 | 532 | 1.58e-17 | 85.5 |
| MS.gene31105.t1 | MTR_4g071465 | 24.672 | 458 | 285 | 13 | 7 | 454 | 118 | 525 | 1.24e-15 | 79.7 |
| MS.gene31105.t1 | MTR_4g071420 | 24.565 | 460 | 283 | 15 | 7 | 454 | 126 | 533 | 2.00e-13 | 72.8 |
| MS.gene31105.t1 | MTR_4g071370 | 25.570 | 395 | 228 | 14 | 7 | 386 | 125 | 468 | 1.05e-12 | 70.1 |
| MS.gene31105.t1 | MTR_4g071370 | 25.201 | 373 | 217 | 12 | 7 | 368 | 125 | 446 | 1.73e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31105.t1 | AT1G51340 | 71.245 | 466 | 124 | 4 | 6 | 461 | 44 | 509 | 0.0 | 650 |
| MS.gene31105.t1 | AT1G51340 | 71.245 | 466 | 124 | 4 | 6 | 461 | 50 | 515 | 0.0 | 648 |
| MS.gene31105.t1 | AT1G51340 | 71.245 | 466 | 124 | 4 | 6 | 461 | 50 | 515 | 0.0 | 648 |
| MS.gene31105.t1 | AT1G51340 | 71.245 | 466 | 124 | 4 | 6 | 461 | 50 | 515 | 0.0 | 648 |
| MS.gene31105.t1 | AT3G08040 | 59.442 | 466 | 172 | 3 | 10 | 460 | 55 | 518 | 0.0 | 539 |
| MS.gene31105.t1 | AT3G08040 | 59.158 | 404 | 154 | 2 | 57 | 460 | 22 | 414 | 1.09e-164 | 471 |
| MS.gene31105.t1 | AT1G51340 | 70.381 | 341 | 91 | 4 | 6 | 336 | 50 | 390 | 4.63e-160 | 458 |
| MS.gene31105.t1 | AT4G38380 | 44.956 | 456 | 227 | 3 | 6 | 461 | 13 | 444 | 8.86e-125 | 370 |
| MS.gene31105.t1 | AT4G38380 | 44.956 | 456 | 227 | 3 | 6 | 461 | 51 | 482 | 3.51e-124 | 370 |
| MS.gene31105.t1 | AT4G38380 | 44.956 | 456 | 227 | 3 | 6 | 461 | 123 | 554 | 1.47e-122 | 369 |
| MS.gene31105.t1 | AT4G38380 | 44.956 | 456 | 227 | 3 | 6 | 461 | 123 | 554 | 1.47e-122 | 369 |
| MS.gene31105.t1 | AT2G38330 | 43.860 | 456 | 222 | 2 | 6 | 461 | 94 | 515 | 2.33e-121 | 364 |
| MS.gene31105.t1 | AT4G38380 | 44.518 | 456 | 219 | 3 | 6 | 461 | 123 | 544 | 3.78e-121 | 365 |
| MS.gene31105.t1 | AT2G21340 | 25.333 | 450 | 267 | 16 | 7 | 441 | 134 | 529 | 3.15e-15 | 78.6 |
| MS.gene31105.t1 | AT4G39030 | 24.176 | 455 | 279 | 14 | 7 | 448 | 117 | 518 | 1.65e-14 | 76.3 |
| MS.gene31105.t1 | AT2G21340 | 24.889 | 450 | 266 | 16 | 7 | 441 | 134 | 526 | 3.70e-14 | 75.1 |
Find 111 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCGTCAGCGCTATATTT+TGG | 0.205113 | 2.4:+6084295 | MS.gene31105:CDS |
| ACGGCCTTCATTGGCCAATT+AGG | 0.238684 | 2.4:+6083540 | MS.gene31105:CDS |
| ATGCAGATGGGCATGGTTCT+TGG | 0.278565 | 2.4:+6085764 | MS.gene31105:intron |
| TTCAAGTCTGTCTGCAAGTT+TGG | 0.279500 | 2.4:+6085424 | MS.gene31105:CDS |
| GCGGATGGTCTGGCTGTTGC+CGG | 0.285261 | 2.4:+6085465 | MS.gene31105:CDS |
| TATTTGATGGTGTCAACTTT+GGG | 0.292922 | 2.4:+6086025 | MS.gene31105:CDS |
| TGGTTTCAGGCGATTCTTGC+AGG | 0.293939 | 2.4:+6085563 | MS.gene31105:intron |
| TTGGCACTTGCATTCATTCT+TGG | 0.305585 | 2.4:+6085788 | MS.gene31105:CDS |
| AACATGATAACATACCTAAT+TGG | 0.313690 | 2.4:-6083554 | None:intergenic |
| AATTTCAAGTACTGCATTGC+AGG | 0.318886 | 2.4:-6084561 | None:intergenic |
| TGTTTGGCCTTTGTATTTGA+TGG | 0.334770 | 2.4:+6086012 | MS.gene31105:CDS |
| AAAACCTTTATTGAACTTCA+TGG | 0.337472 | 2.4:+6084363 | MS.gene31105:CDS |
| ATACAAAGGCCAAACAGTTC+AGG | 0.350521 | 2.4:-6086005 | None:intergenic |
| AACTCTTTGGTTTCAGCATC+CGG | 0.351723 | 2.4:-6084088 | None:intergenic |
| TGAAAGCTTTAATGTAGTTA+AGG | 0.364155 | 2.4:+6084240 | MS.gene31105:CDS |
| AACTGCTACCCGAGTATTGC+AGG | 0.367216 | 2.4:+6085622 | MS.gene31105:CDS |
| GCCCGCTGCAATGGCTTTGA+CGG | 0.379476 | 2.4:+6083491 | None:intergenic |
| CTTGCATTCATTCTTGGAAC+AGG | 0.384448 | 2.4:+6085794 | MS.gene31105:CDS |
| TTATGATGCAGGATTGGAAC+TGG | 0.389829 | 2.4:+6086671 | MS.gene31105:intron |
| TTTAATGTAGTTAAGGTTGA+TGG | 0.390926 | 2.4:+6084247 | MS.gene31105:CDS |
| ACTCCCATGAAGTTCAATAA+AGG | 0.391036 | 2.4:-6084367 | None:intergenic |
| TACATACCAGTGGCATATAA+AGG | 0.392262 | 2.4:-6084663 | None:intergenic |
| CAGAAATAAGCAACGTTGCC+TGG | 0.395145 | 2.4:-6084336 | None:intergenic |
| GTCCCTTCTTGCGGATGGTC+TGG | 0.395512 | 2.4:+6085455 | MS.gene31105:CDS |
| TCTTCTTTCATTAGCGATGC+AGG | 0.402072 | 2.4:+6084608 | MS.gene31105:CDS |
| TGGTCTGGCTGTTGCCGGGC+AGG | 0.402764 | 2.4:+6085470 | MS.gene31105:CDS |
| CTGTGAGCTTGCGTCGCTTA+AGG | 0.406638 | 2.4:-6084029 | None:intergenic |
| TCCTACACCTCATTAGAGTT+GGG | 0.408785 | 2.4:+6085858 | MS.gene31105:CDS |
| TCTTCATTCTCAGGTTATAG+TGG | 0.409610 | 2.4:+6086427 | MS.gene31105:intron |
| GTATTTGATGGTGTCAACTT+TGG | 0.411044 | 2.4:+6086024 | MS.gene31105:CDS |
| CACTCAACCCCTGAACTGTT+TGG | 0.424826 | 2.4:+6085996 | MS.gene31105:CDS |
| ATGAGTTTAAGAGCCTTTGC+TGG | 0.427946 | 2.4:+6086530 | MS.gene31105:CDS |
| TTGGTCGATACGGCCTTCAT+TGG | 0.428017 | 2.4:+6083531 | MS.gene31105:CDS |
| TTTCTGCGGTAAGAACTCTT+TGG | 0.430202 | 2.4:-6084101 | None:intergenic |
| CGACGCAAGCTCACAGGTAG+AGG | 0.442007 | 2.4:+6084036 | MS.gene31105:CDS |
| CTTGGAACAGGATTGCACTT+TGG | 0.450496 | 2.4:+6085806 | MS.gene31105:CDS |
| TACTTGAAATTGAGATCTCT+TGG | 0.450593 | 2.4:+6084573 | MS.gene31105:CDS |
| TGCAGGATTGGAACTGGGTC+AGG | 0.452693 | 2.4:+6086677 | MS.gene31105:intron |
| GGCTGATCCTATAGCATCAT+TGG | 0.454668 | 2.4:+6083512 | MS.gene31105:CDS |
| CAGGACCATGGGAATTCCTT+AGG | 0.460543 | 2.4:+6086696 | MS.gene31105:CDS |
| CTTGGAAGCTGCGACACCTC+CGG | 0.465998 | 2.4:+6084069 | MS.gene31105:CDS |
| AATTGCAGATGTTTGATGCT+TGG | 0.468820 | 2.4:-6085061 | None:intergenic |
| TGCAGGTGCATTTGCTAACA+AGG | 0.477862 | 2.4:+6085580 | MS.gene31105:CDS |
| TACAAAGGCCAAACAGTTCA+GGG | 0.478905 | 2.4:-6086004 | None:intergenic |
| CGGATGGTCTGGCTGTTGCC+GGG | 0.479805 | 2.4:+6085466 | MS.gene31105:CDS |
| AAACCTTTATTGAACTTCAT+GGG | 0.481789 | 2.4:+6084364 | MS.gene31105:CDS |
| GATGGGCATGGTTCTTGGAT+TGG | 0.483353 | 2.4:+6085769 | MS.gene31105:intron |
| TGGAACTGGGTCAGGACCAT+GGG | 0.486703 | 2.4:+6086685 | MS.gene31105:CDS |
| CCTACTGCAGCAAGCTCCAC+TGG | 0.487433 | 2.4:-6083917 | None:intergenic |
| GTATCGACCAATGATGCTAT+AGG | 0.489373 | 2.4:-6083519 | None:intergenic |
| GTCCTACACCTCATTAGAGT+TGG | 0.498396 | 2.4:+6085857 | MS.gene31105:CDS |
| TGCTAACAAGGACTATGAAA+AGG | 0.500938 | 2.4:+6085592 | MS.gene31105:CDS |
| GCAGTGTCCCTTCTTGCGGA+TGG | 0.503081 | 2.4:+6085450 | MS.gene31105:CDS |
| CTTGTTTGTTCAAACTCCAC+AGG | 0.509281 | 2.4:-6085024 | None:intergenic |
| GCTAGCGCACTTAGCTCCTA+AGG | 0.510397 | 2.4:-6086712 | None:intergenic |
| CATACCTAATTGGCCAATGA+AGG | 0.513148 | 2.4:-6083544 | None:intergenic |
| AGTCTGTCTGCAAGTTTGGT+TGG | 0.514353 | 2.4:+6085428 | MS.gene31105:CDS |
| CCTCATTAGAGTTGGGGTCC+CGG | 0.519902 | 2.4:+6085865 | MS.gene31105:CDS |
| CCAGTGGAGCTTGCTGCAGT+AGG | 0.523504 | 2.4:+6083917 | MS.gene31105:CDS |
| AGCTCACAGGTAGAGGAGAA+TGG | 0.528973 | 2.4:+6084043 | MS.gene31105:CDS |
| TGTAGAACACCTGCAATACT+CGG | 0.533112 | 2.4:-6085631 | None:intergenic |
| CTTAAGCGACGCAAGCTCAC+AGG | 0.533775 | 2.4:+6084030 | MS.gene31105:CDS |
| CTTCTTTCATTAGCGATGCA+GGG | 0.537717 | 2.4:+6084609 | MS.gene31105:CDS |
| TGCAGATGTTTGATGCTTGG+AGG | 0.538167 | 2.4:-6085058 | None:intergenic |
| TTGGAACTGGGTCAGGACCA+TGG | 0.539529 | 2.4:+6086684 | MS.gene31105:CDS |
| CAGCCAGACCATCCGCAAGA+AGG | 0.542007 | 2.4:-6085458 | None:intergenic |
| GGTAGAGGAGAATGGATGCT+TGG | 0.544369 | 2.4:+6084051 | MS.gene31105:CDS |
| TATAGCATCATTGGTCGATA+CGG | 0.544448 | 2.4:+6083521 | MS.gene31105:CDS |
| GAGCCTTTGCTGGCTTCTTG+AGG | 0.546982 | 2.4:+6086540 | MS.gene31105:CDS |
| AAAACTCCTTTATATGCCAC+TGG | 0.548051 | 2.4:+6084657 | MS.gene31105:CDS |
| ACGTTGCCTGGACGAGGCCA+AGG | 0.550365 | 2.4:-6084324 | None:intergenic |
| AGGTATCCTTGGCCTCGTCC+AGG | 0.551223 | 2.4:+6084318 | MS.gene31105:CDS |
| GTATTCCGCATGGGTGTCAA+CGG | 0.551236 | 2.4:+6084803 | MS.gene31105:CDS |
| CTCTATTCAATCAAGCATCA+AGG | 0.567403 | 2.4:+6083951 | MS.gene31105:CDS |
| TGCTTGATTGAATAGAGCTA+TGG | 0.567545 | 2.4:-6083945 | None:intergenic |
| GGTAACATTCTGCGTGACAC+TGG | 0.567656 | 2.4:+6085356 | MS.gene31105:CDS |
| GTTGGCAGTGTCCCTTCTTG+CGG | 0.568099 | 2.4:+6085446 | MS.gene31105:CDS |
| GAGATCTCTTGGTGCTCCTG+CGG | 0.568151 | 2.4:+6084584 | MS.gene31105:CDS |
| TGCATATTCAGCCTTCTCCA+TGG | 0.574962 | 2.4:+6086059 | MS.gene31105:CDS |
| TAATATAATGCAGATGGGCA+TGG | 0.575585 | 2.4:+6085757 | MS.gene31105:intron |
| AGCCAGACCATCCGCAAGAA+GGG | 0.579779 | 2.4:-6085457 | None:intergenic |
| TAAGCAACGTTGCCTGGACG+AGG | 0.584099 | 2.4:-6084330 | None:intergenic |
| TGAATCATATCTCACCTGCC+CGG | 0.590246 | 2.4:-6085484 | None:intergenic |
| GAAGTTACATACCATGGAGA+AGG | 0.599442 | 2.4:-6086070 | None:intergenic |
| ACAGACTTGAAATGCAGCCA+TGG | 0.602463 | 2.4:-6085412 | None:intergenic |
| ATTTGATGGTGTCAACTTTG+GGG | 0.602557 | 2.4:+6086026 | MS.gene31105:CDS |
| CCGGGACCCCAACTCTAATG+AGG | 0.604305 | 2.4:-6085865 | None:intergenic |
| TACTTTCAGCTATACTCCTG+TGG | 0.608095 | 2.4:+6085008 | MS.gene31105:CDS |
| TACTCGGGTAGCAGTTGTTG+AGG | 0.609106 | 2.4:-6085615 | None:intergenic |
| TGCATTGCAGGATGTAGCAT+AGG | 0.609472 | 2.4:-6084549 | None:intergenic |
| GAAGTTGTGACACTGACTAG+TGG | 0.610876 | 2.4:-6083986 | None:intergenic |
| GCTAATGAAAGAAGAACCGC+AGG | 0.618157 | 2.4:-6084600 | None:intergenic |
| ATTGGTCTCTACAGGTCCAG+TGG | 0.619428 | 2.4:+6083901 | MS.gene31105:intron |
| GTAGAACACCTGCAATACTC+GGG | 0.620615 | 2.4:-6085630 | None:intergenic |
| AAGTTGTGACACTGACTAGT+GGG | 0.626798 | 2.4:-6083985 | None:intergenic |
| CCCCAACTCTAATGAGGTGT+AGG | 0.629440 | 2.4:-6085859 | None:intergenic |
| ATTATTCATGAGAGTCATTG+CGG | 0.631200 | 2.4:+6085335 | MS.gene31105:CDS |
| TATGATGCAGGATTGGAACT+GGG | 0.631342 | 2.4:+6086672 | MS.gene31105:intron |
| AGGTTGATGGAAGTAAGAGA+AGG | 0.632842 | 2.4:+6084260 | MS.gene31105:CDS |
| ACACCACGGATCAACATCCA+TGG | 0.637699 | 2.4:+6085395 | MS.gene31105:CDS |
| TTACCTCAAGAAGCCAGCAA+AGG | 0.639714 | 2.4:-6086543 | None:intergenic |
| CTGAGATATAACATGTGCAA+TGG | 0.641731 | 2.4:-6084831 | None:intergenic |
| CCTACACCTCATTAGAGTTG+GGG | 0.644035 | 2.4:+6085859 | MS.gene31105:CDS |
| GTTGACACCATCAAATACAA+AGG | 0.646571 | 2.4:-6086019 | None:intergenic |
| TATAGCGCTGACGAAGCTGA+AGG | 0.652574 | 2.4:-6084289 | None:intergenic |
| TCTTTGGTTTCAGCATCCGG+AGG | 0.669170 | 2.4:-6084085 | None:intergenic |
| TAGCTCCTAAGGAATTCCCA+TGG | 0.675106 | 2.4:-6086701 | None:intergenic |
| ACAAAGGCCAAACAGTTCAG+GGG | 0.700393 | 2.4:-6086003 | None:intergenic |
| GCATCATTAGCTGCACACCA+CGG | 0.714665 | 2.4:+6085381 | MS.gene31105:CDS |
| CAGCCATGGATGTTGATCCG+TGG | 0.715332 | 2.4:-6085398 | None:intergenic |
| CTGCACCGTTGACACCCATG+CGG | 0.715966 | 2.4:-6084808 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATGAATAGAACTATA+GGG | + | chr2.4:6083765-6083784 | MS.gene31105:intron | 15.0% |
| !! | AATTATAATATAATGCAGAT+GGG | + | chr2.4:6085752-6085771 | MS.gene31105:intron | 15.0% |
| !! | GTATAAACTTTAAATAACAT+TGG | - | chr2.4:6085203-6085222 | None:intergenic | 15.0% |
| !! | TAATTATAATATAATGCAGA+TGG | + | chr2.4:6085751-6085770 | MS.gene31105:intron | 15.0% |
| !! | TATAGTTTAATACAGATTTA+AGG | + | chr2.4:6084888-6084907 | MS.gene31105:intron | 15.0% |
| !! | TTAAAGTTTATACACAAATT+TGG | + | chr2.4:6085210-6085229 | MS.gene31105:intron | 15.0% |
| !!! | ACTTAATTACATTGATTATT+TGG | - | chr2.4:6083833-6083852 | None:intergenic | 15.0% |
| !! | AATTTATTCGTGTTCAAATT+TGG | + | chr2.4:6085889-6085908 | MS.gene31105:intron | 20.0% |
| !! | ACGATGATTGAAAAATAATA+TGG | + | chr2.4:6084507-6084526 | MS.gene31105:intron | 20.0% |
| !! | GAAAATATGAATAGAACTAT+AGG | + | chr2.4:6083764-6083783 | MS.gene31105:intron | 20.0% |
| !! | GTTTATAGTCCTTATTAAAA+AGG | - | chr2.4:6085679-6085698 | None:intergenic | 20.0% |
| !!! | ATAATATGGATTATTTGTAC+AGG | + | chr2.4:6084521-6084540 | MS.gene31105:intron | 20.0% |
| ! | AAAACCTTTATTGAACTTCA+TGG | + | chr2.4:6084363-6084382 | MS.gene31105:CDS | 25.0% |
| ! | AAACCATTTCGTAGATAATA+AGG | - | chr2.4:6085122-6085141 | None:intergenic | 25.0% |
| ! | AAACCTTTATTGAACTTCAT+GGG | + | chr2.4:6084364-6084383 | MS.gene31105:CDS | 25.0% |
| ! | AACATGATAACATACCTAAT+TGG | - | chr2.4:6083557-6083576 | None:intergenic | 25.0% |
| ! | AATCCTTATTATCTACGAAA+TGG | + | chr2.4:6085116-6085135 | MS.gene31105:intron | 25.0% |
| ! | AATGAAAGTTCTACTCTTTA+GGG | - | chr2.4:6085945-6085964 | None:intergenic | 25.0% |
| ! | ATTAAAATATAGACTCTCCA+TGG | - | chr2.4:6086139-6086158 | None:intergenic | 25.0% |
| ! | CAAAATCAAATAGAAGCAAA+AGG | - | chr2.4:6084949-6084968 | None:intergenic | 25.0% |
| ! | TTCAAATTAACTGTAAATGC+AGG | + | chr2.4:6084981-6085000 | MS.gene31105:intron | 25.0% |
| ! | TTTAATGTAGTTAAGGTTGA+TGG | + | chr2.4:6084247-6084266 | MS.gene31105:CDS | 25.0% |
| ! | TTTCAATGATTCTTCAAGAT+TGG | - | chr2.4:6086167-6086186 | None:intergenic | 25.0% |
| ! | TTTGAACACGAATAAATTAC+CGG | - | chr2.4:6085887-6085906 | None:intergenic | 25.0% |
| !! | ATATCTCAGTATGTTTTACT+TGG | + | chr2.4:6084845-6084864 | MS.gene31105:intron | 25.0% |
| !! | TAGTAATCAGGAAATTTTCT+TGG | - | chr2.4:6084184-6084203 | None:intergenic | 25.0% |
| !! | TGAAAGCTTTAATGTAGTTA+AGG | + | chr2.4:6084240-6084259 | MS.gene31105:CDS | 25.0% |
| !! | TTATAAACCCTTACCATTTT+TGG | - | chr2.4:6085098-6085117 | None:intergenic | 25.0% |
| !!! | AAACCAAGATGATGTTTTTT+CGG | - | chr2.4:6085549-6085568 | None:intergenic | 25.0% |
| !!! | AGAATATGAAAGAAAGCATT+AGG | - | chr2.4:6086591-6086610 | None:intergenic | 25.0% |
| AAAAACATCATCTTGGTTTC+AGG | + | chr2.4:6085550-6085569 | MS.gene31105:intron | 30.0% | |
| AAAACATTGTAGCAAGAGTT+TGG | - | chr2.4:6086346-6086365 | None:intergenic | 30.0% | |
| ACATTACGAGACTTACTTAT+AGG | + | chr2.4:6084415-6084434 | MS.gene31105:intron | 30.0% | |
| ACATTCGTATGTTAGTAATC+AGG | - | chr2.4:6084196-6084215 | None:intergenic | 30.0% | |
| AGGAAATTAAGAGACAAGAT+AGG | - | chr2.4:6084929-6084948 | None:intergenic | 30.0% | |
| ATGACAATAATGAAATGGGA+AGG | - | chr2.4:6085304-6085323 | None:intergenic | 30.0% | |
| ATTATTCATGAGAGTCATTG+CGG | + | chr2.4:6085335-6085354 | MS.gene31105:CDS | 30.0% | |
| ATTCGTGTTCAAATTTGGAA+AGG | + | chr2.4:6085894-6085913 | MS.gene31105:intron | 30.0% | |
| CGGAATACAAAAATGAAAAG+CGG | - | chr2.4:6084791-6084810 | None:intergenic | 30.0% | |
| CTGCATGACAATAATGAAAT+GGG | - | chr2.4:6085308-6085327 | None:intergenic | 30.0% | |
| GAATGAAAGTTCTACTCTTT+AGG | - | chr2.4:6085946-6085965 | None:intergenic | 30.0% | |
| GATATGATTCATTACTCTCT+CGG | + | chr2.4:6085496-6085515 | MS.gene31105:intron | 30.0% | |
| GATCAAAGCAGATTAAAACA+TGG | - | chr2.4:6086098-6086117 | None:intergenic | 30.0% | |
| TACTTGAAATTGAGATCTCT+TGG | + | chr2.4:6084573-6084592 | MS.gene31105:CDS | 30.0% | |
| TCAATGAACTATTATGATGC+AGG | + | chr2.4:6086660-6086679 | MS.gene31105:intron | 30.0% | |
| TCTTGCTCTACTAATTTGAA+CGG | - | chr2.4:6083659-6083678 | None:intergenic | 30.0% | |
| TTGAACACGAATAAATTACC+GGG | - | chr2.4:6085886-6085905 | None:intergenic | 30.0% | |
| ! | TCAGCAGAGATATATTTTCT+GGG | + | chr2.4:6085156-6085175 | MS.gene31105:intron | 30.0% |
| ! | TTCAGCAGAGATATATTTTC+TGG | + | chr2.4:6085155-6085174 | MS.gene31105:intron | 30.0% |
| !! | ATTACCGATTTGAACGTAAA+AGG | - | chr2.4:6085269-6085288 | None:intergenic | 30.0% |
| !! | CATCAAGTGTTGGATATTAT+TGG | + | chr2.4:6083883-6083902 | MS.gene31105:intron | 30.0% |
| !! | TATTTGATGGTGTCAACTTT+GGG | + | chr2.4:6086025-6086044 | MS.gene31105:CDS | 30.0% |
| !! | TTCATTTTTGTATTCCGCAT+GGG | + | chr2.4:6084794-6084813 | MS.gene31105:CDS | 30.0% |
| !! | TTTCATTTTTGTATTCCGCA+TGG | + | chr2.4:6084793-6084812 | MS.gene31105:CDS | 30.0% |
| !!! | CATTATTTTAAGAAGATCGC+TGG | + | chr2.4:6085652-6085671 | MS.gene31105:intron | 30.0% |
| !!! | TACTTATTTTGTCATCTGCT+GGG | + | chr2.4:6086471-6086490 | MS.gene31105:CDS | 30.0% |
| AAAACTCCTTTATATGCCAC+TGG | + | chr2.4:6084657-6084676 | MS.gene31105:CDS | 35.0% | |
| AATTGCAGATGTTTGATGCT+TGG | - | chr2.4:6085064-6085083 | None:intergenic | 35.0% | |
| ACTCCCATGAAGTTCAATAA+AGG | - | chr2.4:6084370-6084389 | None:intergenic | 35.0% | |
| ATGAAGTTAACGACGATTAG+TGG | + | chr2.4:6086385-6086404 | MS.gene31105:intron | 35.0% | |
| ATGGATGAAGTTACATACCA+TGG | - | chr2.4:6086079-6086098 | None:intergenic | 35.0% | |
| CCATTTCATTATTGTCATGC+AGG | + | chr2.4:6085306-6085325 | MS.gene31105:intron | 35.0% | |
| CCTGCATGACAATAATGAAA+TGG | - | chr2.4:6085309-6085328 | None:intergenic | 35.0% | |
| CGATTTGCCAAAAATGGTAA+GGG | + | chr2.4:6085088-6085107 | MS.gene31105:intron | 35.0% | |
| CTATCAGGAAAGTAGAAGAA+TGG | - | chr2.4:6084131-6084150 | None:intergenic | 35.0% | |
| CTCTATTCAATCAAGCATCA+AGG | + | chr2.4:6083951-6083970 | MS.gene31105:CDS | 35.0% | |
| CTGAGATATAACATGTGCAA+TGG | - | chr2.4:6084834-6084853 | None:intergenic | 35.0% | |
| CTTCCGAAAAAACATCATCT+TGG | + | chr2.4:6085543-6085562 | MS.gene31105:intron | 35.0% | |
| GAACTATTATGATGCAGGAT+TGG | + | chr2.4:6086665-6086684 | MS.gene31105:intron | 35.0% | |
| GGTCGAATCATTAAAGATGT+AGG | - | chr2.4:6084475-6084494 | None:intergenic | 35.0% | |
| GTTGACACCATCAAATACAA+AGG | - | chr2.4:6086022-6086041 | None:intergenic | 35.0% | |
| TAATATAATGCAGATGGGCA+TGG | + | chr2.4:6085757-6085776 | MS.gene31105:intron | 35.0% | |
| TACATACCAGTGGCATATAA+AGG | - | chr2.4:6084666-6084685 | None:intergenic | 35.0% | |
| TATAGCATCATTGGTCGATA+CGG | + | chr2.4:6083521-6083540 | MS.gene31105:CDS | 35.0% | |
| TCATGTCATTCTTCATTCTC+AGG | + | chr2.4:6086418-6086437 | MS.gene31105:intron | 35.0% | |
| TCTTCATTCTCAGGTTATAG+TGG | + | chr2.4:6086427-6086446 | MS.gene31105:intron | 35.0% | |
| TGCTAACAAGGACTATGAAA+AGG | + | chr2.4:6085592-6085611 | MS.gene31105:CDS | 35.0% | |
| TGCTTGATTGAATAGAGCTA+TGG | - | chr2.4:6083948-6083967 | None:intergenic | 35.0% | |
| TGTTATAACGCATCAAGTGT+TGG | + | chr2.4:6083873-6083892 | MS.gene31105:intron | 35.0% | |
| TGTTGATCCAACTCGAAAAA+TGG | + | chr2.4:6083796-6083815 | MS.gene31105:intron | 35.0% | |
| TGTTTGTGTTAGCGCTTTAT+AGG | + | chr2.4:6086311-6086330 | MS.gene31105:intron | 35.0% | |
| TTAATGATTCGACCTCGTAT+CGG | + | chr2.4:6084481-6084500 | MS.gene31105:intron | 35.0% | |
| ! | AATTTCAAGTACTGCATTGC+AGG | - | chr2.4:6084564-6084583 | None:intergenic | 35.0% |
| ! | AGAAGAATGGTACTTTTCTG+CGG | - | chr2.4:6084118-6084137 | None:intergenic | 35.0% |
| ! | ATCGCTGGTCCTTTTTAATA+AGG | + | chr2.4:6085667-6085686 | MS.gene31105:intron | 35.0% |
| ! | CACTCCTTTTACGTTCAAAT+CGG | + | chr2.4:6085262-6085281 | MS.gene31105:intron | 35.0% |
| ! | CAGCAGAGATATATTTTCTG+GGG | + | chr2.4:6085157-6085176 | MS.gene31105:intron | 35.0% |
| ! | TCGATTTGCCAAAAATGGTA+AGG | + | chr2.4:6085087-6085106 | MS.gene31105:intron | 35.0% |
| ! | TGGATATTATTGGTCTCTAC+AGG | + | chr2.4:6083893-6083912 | MS.gene31105:intron | 35.0% |
| ! | TGTGTTGACAAACTCAGATT+CGG | + | chr2.4:6084213-6084232 | MS.gene31105:intron | 35.0% |
| ! | TGTTTGGCCTTTGTATTTGA+TGG | + | chr2.4:6086012-6086031 | MS.gene31105:CDS | 35.0% |
| !! | ATTTGATGGTGTCAACTTTG+GGG | + | chr2.4:6086026-6086045 | MS.gene31105:CDS | 35.0% |
| !! | GTATGTTTGTTGTAATCCAG+TGG | + | chr2.4:6084736-6084755 | MS.gene31105:intron | 35.0% |
| !! | GTATTTGATGGTGTCAACTT+TGG | + | chr2.4:6086024-6086043 | MS.gene31105:CDS | 35.0% |
| !! | TTCGATCGATTTGCCAAAAA+TGG | + | chr2.4:6085082-6085101 | MS.gene31105:CDS | 35.0% |
| !! | TTTATTTTCAGCCTTCTCCA+TGG | + | chr2.4:6086119-6086138 | MS.gene31105:intron | 35.0% |
| !!! | ACTTATTTTGTCATCTGCTG+GGG | + | chr2.4:6086472-6086491 | MS.gene31105:CDS | 35.0% |
| !!! | CTACTTATTTTGTCATCTGC+TGG | + | chr2.4:6086470-6086489 | MS.gene31105:CDS | 35.0% |
| !!! | CTATATTTTGGAGGTATCCT+TGG | + | chr2.4:6084307-6084326 | MS.gene31105:CDS | 35.0% |
| !!! | CTTCTATCCATTTTTCGAGT+TGG | - | chr2.4:6083806-6083825 | None:intergenic | 35.0% |
| !!! | GCTATGTCTATCGACTTTTT+TGG | - | chr2.4:6083637-6083656 | None:intergenic | 35.0% |
| ATACAAAGGCCAAACAGTTC+AGG | - | chr2.4:6086008-6086027 | None:intergenic | 40.0% | |
| ATATAGACTCTCCATGGAGA+AGG | - | chr2.4:6086133-6086152 | None:intergenic | 40.0% | |
| ATGAGTTTAAGAGCCTTTGC+TGG | + | chr2.4:6086530-6086549 | MS.gene31105:CDS | 40.0% | |
| CATACCTAATTGGCCAATGA+AGG | - | chr2.4:6083547-6083566 | None:intergenic | 40.0% | |
| CTCAAATCTTGTGCATGTGT+TGG | - | chr2.4:6083696-6083715 | None:intergenic | 40.0% | |
| CTTCTTTCATTAGCGATGCA+GGG | + | chr2.4:6084609-6084628 | MS.gene31105:CDS | 40.0% | |
| CTTGCATTCATTCTTGGAAC+AGG | + | chr2.4:6085794-6085813 | MS.gene31105:CDS | 40.0% | |
| CTTGTTTGTTCAAACTCCAC+AGG | - | chr2.4:6085027-6085046 | None:intergenic | 40.0% | |
| GAAGTTACATACCATGGAGA+AGG | - | chr2.4:6086073-6086092 | None:intergenic | 40.0% | |
| TACAAAGGCCAAACAGTTCA+GGG | - | chr2.4:6086007-6086026 | None:intergenic | 40.0% | |
| TACTTTCAGCTATACTCCTG+TGG | + | chr2.4:6085008-6085027 | MS.gene31105:CDS | 40.0% | |
| TATCCATTCACTTGTGAGAC+AGG | - | chr2.4:6083728-6083747 | None:intergenic | 40.0% | |
| TATGATGCAGGATTGGAACT+GGG | + | chr2.4:6086672-6086691 | MS.gene31105:intron | 40.0% | |
| TCCAAATGTTGCAAGTGTCT+TGG | - | chr2.4:6086626-6086645 | None:intergenic | 40.0% | |
| TCCAAGACACTTGCAACATT+TGG | + | chr2.4:6086622-6086641 | MS.gene31105:intron | 40.0% | |
| TCCTACACCTCATTAGAGTT+GGG | + | chr2.4:6085858-6085877 | MS.gene31105:CDS | 40.0% | |
| TCTTCTTTCATTAGCGATGC+AGG | + | chr2.4:6084608-6084627 | MS.gene31105:CDS | 40.0% | |
| TGAACGTAAAAGGAGTGACA+TGG | - | chr2.4:6085259-6085278 | None:intergenic | 40.0% | |
| TGGGGGATTCATTGGAATTT+GGG | + | chr2.4:6086490-6086509 | MS.gene31105:CDS | 40.0% | |
| TGTAGAACACCTGCAATACT+CGG | - | chr2.4:6085634-6085653 | None:intergenic | 40.0% | |
| TTATGATGCAGGATTGGAAC+TGG | + | chr2.4:6086671-6086690 | MS.gene31105:intron | 40.0% | |
| TTCAAGTCTGTCTGCAAGTT+TGG | + | chr2.4:6085424-6085443 | MS.gene31105:CDS | 40.0% | |
| TTGGCACTTGCATTCATTCT+TGG | + | chr2.4:6085788-6085807 | MS.gene31105:CDS | 40.0% | |
| TTTCTGCGGTAAGAACTCTT+TGG | - | chr2.4:6084104-6084123 | None:intergenic | 40.0% | |
| ! | AACTCTTTGGTTTCAGCATC+CGG | - | chr2.4:6084091-6084110 | None:intergenic | 40.0% |
| ! | AAGTTGTGACACTGACTAGT+GGG | - | chr2.4:6083988-6084007 | None:intergenic | 40.0% |
| ! | CAGTGTCACAACTTCTTTTG+TGG | + | chr2.4:6083994-6084013 | MS.gene31105:CDS | 40.0% |
| ! | GGTTTTCCTGTTGAGAAACA+AGG | - | chr2.4:6084163-6084182 | None:intergenic | 40.0% |
| ! | GTATCGACCAATGATGCTAT+AGG | - | chr2.4:6083522-6083541 | None:intergenic | 40.0% |
| !! | AGGTTGATGGAAGTAAGAGA+AGG | + | chr2.4:6084260-6084279 | MS.gene31105:CDS | 40.0% |
| !!! | CTTATTTTGTCATCTGCTGG+GGG | + | chr2.4:6086473-6086492 | MS.gene31105:CDS | 40.0% |
| AAGCCTGTCTCACAAGTGAA+TGG | + | chr2.4:6083722-6083741 | MS.gene31105:intron | 45.0% | |
| ACAAAGGCCAAACAGTTCAG+GGG | - | chr2.4:6086006-6086025 | None:intergenic | 45.0% | |
| ACAGACTTGAAATGCAGCCA+TGG | - | chr2.4:6085415-6085434 | None:intergenic | 45.0% | |
| ACGTAAAAGGAGTGACATGG+AGG | - | chr2.4:6085256-6085275 | None:intergenic | 45.0% | |
| AGTCTGTCTGCAAGTTTGGT+TGG | + | chr2.4:6085428-6085447 | MS.gene31105:CDS | 45.0% | |
| CAGAAATAAGCAACGTTGCC+TGG | - | chr2.4:6084339-6084358 | None:intergenic | 45.0% | |
| CCTACACCTCATTAGAGTTG+GGG | + | chr2.4:6085859-6085878 | MS.gene31105:CDS | 45.0% | |
| CTGGGGGATTCATTGGAATT+TGG | + | chr2.4:6086489-6086508 | MS.gene31105:CDS | 45.0% | |
| CTTGGAACAGGATTGCACTT+TGG | + | chr2.4:6085806-6085825 | MS.gene31105:CDS | 45.0% | |
| GCTAACACAAACACAGACAC+TGG | - | chr2.4:6086304-6086323 | None:intergenic | 45.0% | |
| GCTAATGAAAGAAGAACCGC+AGG | - | chr2.4:6084603-6084622 | None:intergenic | 45.0% | |
| GGCTGATCCTATAGCATCAT+TGG | + | chr2.4:6083512-6083531 | MS.gene31105:CDS | 45.0% | |
| GTAGAACACCTGCAATACTC+GGG | - | chr2.4:6085633-6085652 | None:intergenic | 45.0% | |
| GTCCTACACCTCATTAGAGT+TGG | + | chr2.4:6085857-6085876 | MS.gene31105:CDS | 45.0% | |
| GTTGAGTGAGTGCTACAAAC+TGG | - | chr2.4:6085984-6086003 | None:intergenic | 45.0% | |
| TAGCTCCTAAGGAATTCCCA+TGG | - | chr2.4:6086704-6086723 | None:intergenic | 45.0% | |
| TCCTGTTGAGAAACAAGGCT+TGG | - | chr2.4:6084158-6084177 | None:intergenic | 45.0% | |
| TGAATCATATCTCACCTGCC+CGG | - | chr2.4:6085487-6085506 | None:intergenic | 45.0% | |
| TGCAGATGTTTGATGCTTGG+AGG | - | chr2.4:6085061-6085080 | None:intergenic | 45.0% | |
| TGCATATTCAGCCTTCTCCA+TGG | + | chr2.4:6086059-6086078 | MS.gene31105:CDS | 45.0% | |
| TGCATTGCAGGATGTAGCAT+AGG | - | chr2.4:6084552-6084571 | None:intergenic | 45.0% | |
| TTACCTCAAGAAGCCAGCAA+AGG | - | chr2.4:6086546-6086565 | None:intergenic | 45.0% | |
| ! | CACAACTTCTTTTGTGGCTG+AGG | + | chr2.4:6084000-6084019 | MS.gene31105:CDS | 45.0% |
| ! | GAAGTTGTGACACTGACTAG+TGG | - | chr2.4:6083989-6084008 | None:intergenic | 45.0% |
| ! | GCTTCGTCAGCGCTATATTT+TGG | + | chr2.4:6084295-6084314 | MS.gene31105:CDS | 45.0% |
| ! | TGCAGGTGCATTTGCTAACA+AGG | + | chr2.4:6085580-6085599 | MS.gene31105:CDS | 45.0% |
| !! | GTTTGTTGTAATCCAGTGGC+AGG | + | chr2.4:6084740-6084759 | MS.gene31105:intron | 45.0% |
| !! | TCGTCAGCGCTATATTTTGG+AGG | + | chr2.4:6084298-6084317 | MS.gene31105:CDS | 45.0% |
| ACAAGGCTTGGCAGACTATC+AGG | - | chr2.4:6084146-6084165 | None:intergenic | 50.0% | |
| ACACCACGGATCAACATCCA+TGG | + | chr2.4:6085395-6085414 | MS.gene31105:CDS | 50.0% | |
| ACGGCCTTCATTGGCCAATT+AGG | + | chr2.4:6083540-6083559 | MS.gene31105:CDS | 50.0% | |
| AGCTCACAGGTAGAGGAGAA+TGG | + | chr2.4:6084043-6084062 | MS.gene31105:CDS | 50.0% | |
| ATGCAGATGGGCATGGTTCT+TGG | + | chr2.4:6085764-6085783 | MS.gene31105:intron | 50.0% | |
| CACTCAACCCCTGAACTGTT+TGG | + | chr2.4:6085996-6086015 | MS.gene31105:CDS | 50.0% | |
| CAGGACCATGGGAATTCCTT+AGG | + | chr2.4:6086696-6086715 | MS.gene31105:CDS | 50.0% | |
| CCCCAACTCTAATGAGGTGT+AGG | - | chr2.4:6085862-6085881 | None:intergenic | 50.0% | |
| GATGGGCATGGTTCTTGGAT+TGG | + | chr2.4:6085769-6085788 | MS.gene31105:intron | 50.0% | |
| GCATCATTAGCTGCACACCA+CGG | + | chr2.4:6085381-6085400 | MS.gene31105:CDS | 50.0% | |
| GGTAACATTCTGCGTGACAC+TGG | + | chr2.4:6085356-6085375 | MS.gene31105:CDS | 50.0% | |
| GGTAGAGGAGAATGGATGCT+TGG | + | chr2.4:6084051-6084070 | MS.gene31105:CDS | 50.0% | |
| GTATTCCGCATGGGTGTCAA+CGG | + | chr2.4:6084803-6084822 | MS.gene31105:CDS | 50.0% | |
| TACTCGGGTAGCAGTTGTTG+AGG | - | chr2.4:6085618-6085637 | None:intergenic | 50.0% | |
| TCATCTGCTGGGGGATTCAT+TGG | + | chr2.4:6086482-6086501 | MS.gene31105:CDS | 50.0% | |
| TGGTTTCAGGCGATTCTTGC+AGG | + | chr2.4:6085563-6085582 | MS.gene31105:intron | 50.0% | |
| TGTCGACGCATACATACCAG+TGG | - | chr2.4:6084676-6084695 | None:intergenic | 50.0% | |
| TTCGTCAAATCTCCTGCCAC+TGG | - | chr2.4:6084755-6084774 | None:intergenic | 50.0% | |
| TTGGTCGATACGGCCTTCAT+TGG | + | chr2.4:6083531-6083550 | MS.gene31105:CDS | 50.0% | |
| ! | AACTGCTACCCGAGTATTGC+AGG | + | chr2.4:6085622-6085641 | MS.gene31105:CDS | 50.0% |
| ! | AATCATCGTGTGCCGATACG+AGG | - | chr2.4:6084496-6084515 | None:intergenic | 50.0% |
| ! | ATTGGTCTCTACAGGTCCAG+TGG | + | chr2.4:6083901-6083920 | MS.gene31105:intron | 50.0% |
| ! | TCTTTGGTTTCAGCATCCGG+AGG | - | chr2.4:6084088-6084107 | None:intergenic | 50.0% |
| !! | GCCAAGCCTTGTTTCTCAAC+AGG | + | chr2.4:6084154-6084173 | MS.gene31105:intron | 50.0% |
| !! | TATAGCGCTGACGAAGCTGA+AGG | - | chr2.4:6084292-6084311 | None:intergenic | 50.0% |
| AGCCAGACCATCCGCAAGAA+GGG | - | chr2.4:6085460-6085479 | None:intergenic | 55.0% | |
| CAGCCATGGATGTTGATCCG+TGG | - | chr2.4:6085401-6085420 | None:intergenic | 55.0% | |
| CCTCATTAGAGTTGGGGTCC+CGG | + | chr2.4:6085865-6085884 | MS.gene31105:CDS | 55.0% | |
| CTGTGAGCTTGCGTCGCTTA+AGG | - | chr2.4:6084032-6084051 | None:intergenic | 55.0% | |
| CTTAAGCGACGCAAGCTCAC+AGG | + | chr2.4:6084030-6084049 | MS.gene31105:CDS | 55.0% | |
| GTTGGCAGTGTCCCTTCTTG+CGG | + | chr2.4:6085446-6085465 | MS.gene31105:CDS | 55.0% | |
| TAAGCAACGTTGCCTGGACG+AGG | - | chr2.4:6084333-6084352 | None:intergenic | 55.0% | |
| TGCAGGATTGGAACTGGGTC+AGG | + | chr2.4:6086677-6086696 | MS.gene31105:intron | 55.0% | |
| TGGAACTGGGTCAGGACCAT+GGG | + | chr2.4:6086685-6086704 | MS.gene31105:CDS | 55.0% | |
| TTGGAACTGGGTCAGGACCA+TGG | + | chr2.4:6086684-6086703 | MS.gene31105:CDS | 55.0% | |
| ! | GCGATGCAGGGAGTTTTTCG+AGG | + | chr2.4:6084621-6084640 | MS.gene31105:CDS | 55.0% |
| !! | GAGATCTCTTGGTGCTCCTG+CGG | + | chr2.4:6084584-6084603 | MS.gene31105:CDS | 55.0% |
| !! | GAGCCTTTGCTGGCTTCTTG+AGG | + | chr2.4:6086540-6086559 | MS.gene31105:CDS | 55.0% |
| AGGTATCCTTGGCCTCGTCC+AGG | + | chr2.4:6084318-6084337 | MS.gene31105:CDS | 60.0% | |
| CAGCCAGACCATCCGCAAGA+AGG | - | chr2.4:6085461-6085480 | None:intergenic | 60.0% | |
| CCGGGACCCCAACTCTAATG+AGG | - | chr2.4:6085868-6085887 | None:intergenic | 60.0% | |
| CCTACTGCAGCAAGCTCCAC+TGG | - | chr2.4:6083920-6083939 | None:intergenic | 60.0% | |
| CGACGCAAGCTCACAGGTAG+AGG | + | chr2.4:6084036-6084055 | MS.gene31105:CDS | 60.0% | |
| CTGCACCGTTGACACCCATG+CGG | - | chr2.4:6084811-6084830 | None:intergenic | 60.0% | |
| CTTGGAAGCTGCGACACCTC+CGG | + | chr2.4:6084069-6084088 | MS.gene31105:CDS | 60.0% | |
| GCAGTGTCCCTTCTTGCGGA+TGG | + | chr2.4:6085450-6085469 | MS.gene31105:CDS | 60.0% | |
| GTCCCTTCTTGCGGATGGTC+TGG | + | chr2.4:6085455-6085474 | MS.gene31105:CDS | 60.0% | |
| !! | CCAGTGGAGCTTGCTGCAGT+AGG | + | chr2.4:6083917-6083936 | MS.gene31105:CDS | 60.0% |
| ACGTTGCCTGGACGAGGCCA+AGG | - | chr2.4:6084327-6084346 | None:intergenic | 65.0% | |
| CGGATGGTCTGGCTGTTGCC+GGG | + | chr2.4:6085466-6085485 | MS.gene31105:CDS | 65.0% | |
| GCGGATGGTCTGGCTGTTGC+CGG | + | chr2.4:6085465-6085484 | MS.gene31105:CDS | 65.0% | |
| TGGTCTGGCTGTTGCCGGGC+AGG | + | chr2.4:6085470-6085489 | MS.gene31105:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 6083501 | 6086724 | 6083501 | ID=MS.gene31105 |
| chr2.4 | mRNA | 6083501 | 6086724 | 6083501 | ID=MS.gene31105.t1;Parent=MS.gene31105 |
| chr2.4 | exon | 6083501 | 6083561 | 6083501 | ID=MS.gene31105.t1.exon1;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6083501 | 6083561 | 6083501 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6083915 | 6084124 | 6083915 | ID=MS.gene31105.t1.exon2;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6083915 | 6084124 | 6083915 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6084230 | 6084396 | 6084230 | ID=MS.gene31105.t1.exon3;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6084230 | 6084396 | 6084230 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6084543 | 6084678 | 6084543 | ID=MS.gene31105.t1.exon4;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6084543 | 6084678 | 6084543 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6084756 | 6084852 | 6084756 | ID=MS.gene31105.t1.exon5;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6084756 | 6084852 | 6084756 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6085003 | 6085103 | 6085003 | ID=MS.gene31105.t1.exon6;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6085003 | 6085103 | 6085003 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6085328 | 6085491 | 6085328 | ID=MS.gene31105.t1.exon7;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6085328 | 6085491 | 6085328 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6085572 | 6085643 | 6085572 | ID=MS.gene31105.t1.exon8;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6085572 | 6085643 | 6085572 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6085770 | 6085886 | 6085770 | ID=MS.gene31105.t1.exon9;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6085770 | 6085886 | 6085770 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6085985 | 6086080 | 6085985 | ID=MS.gene31105.t1.exon10;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6085985 | 6086080 | 6085985 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6086440 | 6086561 | 6086440 | ID=MS.gene31105.t1.exon11;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6086440 | 6086561 | 6086440 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| chr2.4 | exon | 6086682 | 6086724 | 6086682 | ID=MS.gene31105.t1.exon12;Parent=MS.gene31105.t1 |
| chr2.4 | CDS | 6086682 | 6086724 | 6086682 | ID=cds.MS.gene31105.t1;Parent=MS.gene31105.t1 |
| Gene Sequence |
| Protein sequence |
