AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24792

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24792.t1 MTR_4g124980 99.115 226 2 0 5 230 267 492 1.59e-164 463
MS.gene24792.t1 MTR_2g042740 85.333 225 33 0 5 229 249 473 1.03e-143 410
MS.gene24792.t1 MTR_7g110710 45.536 224 113 3 5 222 235 455 1.00e-56 187
MS.gene24792.t1 MTR_7g110710 45.536 224 113 3 5 222 235 455 1.07e-56 187
MS.gene24792.t1 MTR_8g098840 42.211 199 113 2 5 202 236 433 2.62e-52 176
MS.gene24792.t1 MTR_2g435340 38.806 201 122 1 5 205 164 363 1.95e-51 171
MS.gene24792.t1 MTR_1g086030 45.631 206 102 4 5 207 170 368 5.14e-51 171
MS.gene24792.t1 MTR_2g435340 38.806 201 122 1 5 205 229 428 6.03e-51 171
MS.gene24792.t1 MTR_1g086030 45.631 206 102 4 5 207 274 472 2.93e-50 171
MS.gene24792.t1 MTR_3g096330 43.961 207 104 5 5 206 268 467 3.04e-49 172
MS.gene24792.t1 MTR_7g078680 41.584 202 116 2 5 205 247 447 5.84e-49 167
MS.gene24792.t1 MTR_1g100040 41.584 202 116 2 5 205 248 448 4.39e-47 162
MS.gene24792.t1 MTR_4g120730 37.624 202 125 1 5 206 232 432 7.64e-46 158
MS.gene24792.t1 MTR_1g100060 39.604 202 120 2 5 205 285 485 1.35e-44 156
MS.gene24792.t1 MTR_3g449590 41.204 216 122 5 5 218 239 451 3.18e-44 154
MS.gene24792.t1 MTR_5g090160 41.667 204 114 3 5 205 237 438 3.40e-44 154
MS.gene24792.t1 MTR_8g028725 36.444 225 131 4 5 228 247 460 7.34e-44 153
MS.gene24792.t1 MTR_1g100050 38.235 204 124 2 5 207 242 444 1.72e-43 152
MS.gene24792.t1 MTR_7g088550 42.029 207 115 3 5 207 242 447 2.35e-42 149
MS.gene24792.t1 MTR_1g099850 37.129 202 125 2 5 205 247 447 2.14e-40 144
MS.gene24792.t1 MTR_6g048610 35.429 175 76 2 6 180 24 161 1.07e-24 95.9
MS.gene24792.t1 MTR_6g005630 28.365 208 125 7 8 209 222 411 1.86e-13 69.3
MS.gene24792.t1 MTR_2g042760 50.000 60 19 2 65 123 1 50 1.09e-11 58.9
MS.gene24792.t1 MTR_8g008700 27.778 198 103 4 9 202 128 289 5.29e-11 61.6
MS.gene24792.t1 MTR_2g103410 27.041 196 125 4 12 202 246 428 5.46e-11 62.0
MS.gene24792.t1 MTR_1g052315 25.225 222 140 6 8 220 245 449 7.35e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24792.t1 AT3G42950 77.333 225 51 0 5 229 259 483 3.04e-132 381
MS.gene24792.t1 AT1G19170 77.778 225 50 0 5 229 281 505 6.12e-131 379
MS.gene24792.t1 AT3G48950 39.286 224 134 2 5 227 238 460 1.39e-51 174
MS.gene24792.t1 AT4G23500 41.518 224 128 3 5 227 260 481 9.67e-51 172
MS.gene24792.t1 AT2G23900 41.584 202 116 2 5 205 249 449 2.31e-50 171
MS.gene24792.t1 AT5G41870 43.750 208 114 3 5 212 238 442 2.76e-50 170
MS.gene24792.t1 AT4G33440 43.781 201 111 2 5 205 264 462 3.25e-50 170
MS.gene24792.t1 AT3G62110 44.681 188 103 1 5 191 235 422 4.31e-50 170
MS.gene24792.t1 AT3G62110 44.681 188 103 1 5 191 235 422 4.31e-50 170
MS.gene24792.t1 AT3G61490 38.053 226 136 3 5 229 237 459 9.07e-47 161
MS.gene24792.t1 AT3G61490 38.053 226 136 3 5 229 237 459 9.07e-47 161
MS.gene24792.t1 AT3G61490 38.053 226 136 3 5 229 237 459 9.07e-47 161
MS.gene24792.t1 AT3G61490 38.053 226 136 3 5 229 252 474 1.26e-46 161
MS.gene24792.t1 AT3G06770 38.916 203 123 1 5 207 148 349 4.77e-46 157
MS.gene24792.t1 AT3G61490 38.889 216 128 3 5 219 350 562 4.83e-46 161
MS.gene24792.t1 AT3G06770 38.916 203 123 1 5 207 166 367 5.45e-46 157
MS.gene24792.t1 AT3G06770 38.916 203 123 1 5 207 166 367 5.45e-46 157
MS.gene24792.t1 AT3G06770 38.916 203 123 1 5 207 235 436 1.89e-45 157
MS.gene24792.t1 AT3G06770 38.916 203 123 1 5 207 236 437 1.90e-45 157
MS.gene24792.t1 AT4G23820 41.791 201 115 2 5 205 233 431 2.18e-45 157
MS.gene24792.t1 AT3G16850 41.791 201 114 2 5 205 232 429 1.19e-42 150
MS.gene24792.t1 AT5G49215 33.654 208 135 2 5 210 233 439 2.80e-39 140
MS.gene24792.t1 AT5G49215 33.654 208 135 2 5 210 235 441 2.95e-39 140
MS.gene24792.t1 AT1G56710 29.126 206 123 8 5 202 236 426 1.36e-13 69.7
MS.gene24792.t1 AT1G80170 28.141 199 124 5 10 202 238 423 1.67e-13 69.3
MS.gene24792.t1 AT5G44830 27.136 199 126 5 9 202 145 329 4.37e-13 67.8
MS.gene24792.t1 AT3G15720 32.370 173 97 6 9 174 194 353 2.70e-12 65.9
MS.gene24792.t1 AT3G15720 32.370 173 97 6 9 174 197 356 2.74e-12 65.9
MS.gene24792.t1 AT3G15720 32.370 173 97 6 9 174 198 357 2.90e-12 65.9
MS.gene24792.t1 AT3G15720 32.370 173 97 6 9 174 134 293 3.10e-12 65.5

Find 69 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGTACATGGCCGTGTAAT+AGG 0.250601 8.2:+7644594 MS.gene24792:CDS
AAAGATGTGCTTCTTCTTGT+AGG 0.280475 8.2:-7644562 None:intergenic
AATCTATATCTGTTACATTC+TGG 0.301959 8.2:-7644692 None:intergenic
GATCAGTATGGAATTGCTTA+TGG 0.314592 8.2:+7643971 MS.gene24792:CDS
ATCTTCTTGTGTGGGATTCT+AGG 0.317361 8.2:+7644259 MS.gene24792:CDS
CTCGCATGGAGATGGGAAAA+TGG 0.361958 8.2:-7644619 None:intergenic
ATAAGCTTCACCAGTGTCTA+TGG 0.362272 8.2:+7644450 MS.gene24792:CDS
AAGCTTATGTCTCTTATAAC+TGG 0.364953 8.2:-7644435 None:intergenic
TAGAGCGAACAACGAGGTTT+CGG 0.369617 8.2:-7644018 None:intergenic
AAACCTCGTTGTTCGCTCTA+TGG 0.372844 8.2:+7644021 MS.gene24792:CDS
ATCTATATCTGTTACATTCT+GGG 0.380122 8.2:-7644691 None:intergenic
AAGAGTGGTTGGGATCAGTA+TGG 0.421829 8.2:+7643959 MS.gene24792:CDS
TCTTGTGTGGGATTCTAGGC+GGG 0.427041 8.2:+7644263 MS.gene24792:CDS
TTGTACATGGCCGTGTAATA+GGG 0.427652 8.2:+7644595 MS.gene24792:CDS
ATGTGCGGCAAATAACTTAT+CGG 0.434253 8.2:+7644322 MS.gene24792:CDS
GTAGGGTCATATCCATCATC+AGG 0.436532 8.2:-7644405 None:intergenic
GTTTCGGATCAATATATTCA+TGG 0.446289 8.2:-7644002 None:intergenic
CTTGCTCATTGTACCGATCA+AGG 0.450350 8.2:-7644644 None:intergenic
GTACAATGAGCAAGGACAAC+TGG 0.482555 8.2:+7644653 MS.gene24792:CDS
CAATAGCAATAAAGAGTGGT+TGG 0.485498 8.2:+7643948 MS.gene24792:CDS
TCAAGGTTCTCGCATGGAGA+TGG 0.487309 8.2:-7644627 None:intergenic
CGCACATATCCGCCTCGTCC+AGG 0.489333 8.2:-7644306 None:intergenic
TTTCAGTGTGCATTTGTACA+TGG 0.494342 8.2:+7644582 MS.gene24792:CDS
TACAATGAACACCCTGATGA+TGG 0.498736 8.2:+7644393 MS.gene24792:CDS
TCGTTGTTCGCTCTATGGTC+AGG 0.500862 8.2:+7644026 MS.gene24792:CDS
CTTATAACTGGAAGTGCCGT+AGG 0.502358 8.2:-7644423 None:intergenic
AACAGTGCTGGTATCTCAAT+AGG 0.503794 8.2:+7644195 MS.gene24792:intron
AAGATTCTCCACCGTGACAT+TGG 0.511289 8.2:-7644241 None:intergenic
ATCTGTTACATTCTGGGACA+TGG 0.514970 8.2:-7644685 None:intergenic
CAAGGTTCTCGCATGGAGAT+GGG 0.517048 8.2:-7644626 None:intergenic
CGGTGGAGAATCTTCTTGTG+TGG 0.518175 8.2:+7644250 MS.gene24792:CDS
AATAGCAATAAAGAGTGGTT+GGG 0.528054 8.2:+7643949 MS.gene24792:CDS
TCAATAGGCAGTGAGATGTC+TGG 0.537106 8.2:+7644210 MS.gene24792:CDS
TTGCGAGGATATGTTGATAG+AGG 0.543214 8.2:+7643898 MS.gene24792:CDS
TGGCCATGGAGTTCGTGTGC+CGG 0.544487 8.2:+7644470 MS.gene24792:CDS
TTCACCAGTGTCTATGGCCA+TGG 0.553675 8.2:+7644456 MS.gene24792:CDS
GGTGGAGAATCTTCTTGTGT+GGG 0.553858 8.2:+7644251 MS.gene24792:CDS
CGAAAAGTTACATTTCTCAC+AGG 0.557026 8.2:-7644519 None:intergenic
CGGATCAATATATTCATGGA+AGG 0.557077 8.2:-7643998 None:intergenic
ATAAAGACTGCACCTGGACG+AGG 0.558213 8.2:+7644294 MS.gene24792:CDS
AACTCCATGGCCATAGACAC+TGG 0.562611 8.2:-7644460 None:intergenic
TTCTTGTGTGGGATTCTAGG+CGG 0.572910 8.2:+7644262 MS.gene24792:CDS
GGGATTCTAGGCGGGGTGTG+AGG 0.573008 8.2:+7644271 MS.gene24792:CDS
CTTGTGTGGGATTCTAGGCG+GGG 0.583944 8.2:+7644264 MS.gene24792:CDS
CTCCATGCGAGAACCTTGAT+CGG 0.593522 8.2:+7644631 MS.gene24792:CDS
TACCGATCAAGGTTCTCGCA+TGG 0.601717 8.2:-7644633 None:intergenic
CGTGTGCCGGTACGTATTCA+CGG 0.606425 8.2:+7644483 MS.gene24792:CDS
GTGAGGATAAAGACTGCACC+TGG 0.609634 8.2:+7644288 MS.gene24792:CDS
ACGTTTGAGAATGTCCGTGT+TGG 0.610358 8.2:+7644351 MS.gene24792:CDS
AGTATGGAATTGCTTATGGA+AGG 0.613405 8.2:+7643975 MS.gene24792:CDS
AGAGGACTGTTACATAAGCG+TGG 0.614203 8.2:+7643916 MS.gene24792:CDS
TCACTACCGTGAATACGTAC+CGG 0.621904 8.2:-7644489 None:intergenic
TGATGATGGATATGACCCTA+CGG 0.624117 8.2:+7644407 MS.gene24792:CDS
TTATAACTGGAAGTGCCGTA+GGG 0.625551 8.2:-7644422 None:intergenic
GAGGACTGTTACATAAGCGT+GGG 0.628169 8.2:+7643917 MS.gene24792:CDS
GTACCGGCACACGAACTCCA+TGG 0.628417 8.2:-7644473 None:intergenic
ATAGGCAGTGAGATGTCTGG+TGG 0.634420 8.2:+7644213 MS.gene24792:CDS
CTGGACGAGGCGGATATGTG+CGG 0.643013 8.2:+7644307 MS.gene24792:CDS
CTTGATCGGTACAATGAGCA+AGG 0.653027 8.2:+7644645 MS.gene24792:CDS
GGAAAATGGTCCCTATTACA+CGG 0.656452 8.2:-7644605 None:intergenic
GATGCAATAGCAATAAAGAG+TGG 0.657676 8.2:+7643944 MS.gene24792:CDS
TAGGCAGTGAGATGTCTGGT+GGG 0.661719 8.2:+7644214 MS.gene24792:CDS
TGGTGGGATATCCAATGTCA+CGG 0.666291 8.2:+7644230 MS.gene24792:CDS
TAGGGTCATATCCATCATCA+GGG 0.672022 8.2:-7644404 None:intergenic
AAGACTGCACCTGGACGAGG+CGG 0.675169 8.2:+7644297 MS.gene24792:CDS
GGCTTGCACAGACTCTTGCG+AGG 0.691384 8.2:+7643883 MS.gene24792:CDS
TCTTCATCACAATTCCAACA+CGG 0.739063 8.2:-7644365 None:intergenic
TGGGATATCCAATGTCACGG+TGG 0.786411 8.2:+7644233 MS.gene24792:CDS
TGACCATAGAGCGAACAACG+AGG 0.809677 8.2:-7644024 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCATAATATATGATAAGA+AGG - chr8.2:7644147-7644166 None:intergenic 15.0%
!! TCATAAAAAAATATGCCAAA+AGG - chr8.2:7644097-7644116 None:intergenic 20.0%
! AATCTATATCTGTTACATTC+TGG - chr8.2:7644695-7644714 None:intergenic 25.0%
! ATCTATATCTGTTACATTCT+GGG - chr8.2:7644694-7644713 None:intergenic 25.0%
AAAAAATATGCCAAAAGGCA+TGG - chr8.2:7644092-7644111 None:intergenic 30.0%
AAGCTTATGTCTCTTATAAC+TGG - chr8.2:7644438-7644457 None:intergenic 30.0%
AATAGCAATAAAGAGTGGTT+GGG + chr8.2:7643949-7643968 MS.gene24792:CDS 30.0%
GTTTCGGATCAATATATTCA+TGG - chr8.2:7644005-7644024 None:intergenic 30.0%
TTTATGAAATGAAACAGTGC+TGG + chr8.2:7644183-7644202 MS.gene24792:intron 30.0%
! AAAAATATGCCAAAAGGCAT+GGG - chr8.2:7644091-7644110 None:intergenic 30.0%
AAAGATGTGCTTCTTCTTGT+AGG - chr8.2:7644565-7644584 None:intergenic 35.0%
AGTATGGAATTGCTTATGGA+AGG + chr8.2:7643975-7643994 MS.gene24792:CDS 35.0%
ATGTGCGGCAAATAACTTAT+CGG + chr8.2:7644322-7644341 MS.gene24792:CDS 35.0%
CAATAGCAATAAAGAGTGGT+TGG + chr8.2:7643948-7643967 MS.gene24792:CDS 35.0%
CGAAAAGTTACATTTCTCAC+AGG - chr8.2:7644522-7644541 None:intergenic 35.0%
CGGATCAATATATTCATGGA+AGG - chr8.2:7644001-7644020 None:intergenic 35.0%
GATCAGTATGGAATTGCTTA+TGG + chr8.2:7643971-7643990 MS.gene24792:CDS 35.0%
GATGCAATAGCAATAAAGAG+TGG + chr8.2:7643944-7643963 MS.gene24792:CDS 35.0%
TCTTCATCACAATTCCAACA+CGG - chr8.2:7644368-7644387 None:intergenic 35.0%
TTTCAGTGTGCATTTGTACA+TGG + chr8.2:7644582-7644601 MS.gene24792:CDS 35.0%
ATAAGCTTCACCAGTGTCTA+TGG + chr8.2:7644450-7644469 MS.gene24792:CDS 40.0%
ATCTTCTTGTGTGGGATTCT+AGG + chr8.2:7644259-7644278 MS.gene24792:CDS 40.0%
GGAAAATGGTCCCTATTACA+CGG - chr8.2:7644608-7644627 None:intergenic 40.0%
TACAATGAACACCCTGATGA+TGG + chr8.2:7644393-7644412 MS.gene24792:CDS 40.0%
TAGGGTCATATCCATCATCA+GGG - chr8.2:7644407-7644426 None:intergenic 40.0%
TTGTACATGGCCGTGTAATA+GGG + chr8.2:7644595-7644614 MS.gene24792:CDS 40.0%
TTTGTACATGGCCGTGTAAT+AGG + chr8.2:7644594-7644613 MS.gene24792:CDS 40.0%
! ACTTTTCGTGACATGTCAGT+TGG + chr8.2:7644534-7644553 MS.gene24792:CDS 40.0%
! CTTTTCGTGACATGTCAGTT+GGG + chr8.2:7644535-7644554 MS.gene24792:CDS 40.0%
! TTGCGAGGATATGTTGATAG+AGG + chr8.2:7643898-7643917 MS.gene24792:CDS 40.0%
!! AACAGTGCTGGTATCTCAAT+AGG + chr8.2:7644195-7644214 MS.gene24792:intron 40.0%
!! ATCTGTTACATTCTGGGACA+TGG - chr8.2:7644688-7644707 None:intergenic 40.0%
!! TGATGATGGATATGACCCTA+CGG + chr8.2:7644407-7644426 MS.gene24792:CDS 40.0%
!! TTATAACTGGAAGTGCCGTA+GGG - chr8.2:7644425-7644444 None:intergenic 40.0%
AAACCTCGTTGTTCGCTCTA+TGG + chr8.2:7644021-7644040 MS.gene24792:CDS 45.0%
AAGAGTGGTTGGGATCAGTA+TGG + chr8.2:7643959-7643978 MS.gene24792:CDS 45.0%
AAGATTCTCCACCGTGACAT+TGG - chr8.2:7644244-7644263 None:intergenic 45.0%
ACGTTTGAGAATGTCCGTGT+TGG + chr8.2:7644351-7644370 MS.gene24792:CDS 45.0%
AGAGGACTGTTACATAAGCG+TGG + chr8.2:7643916-7643935 MS.gene24792:CDS 45.0%
CTTGATCGGTACAATGAGCA+AGG + chr8.2:7644645-7644664 MS.gene24792:CDS 45.0%
GAGGACTGTTACATAAGCGT+GGG + chr8.2:7643917-7643936 MS.gene24792:CDS 45.0%
GGTGGAGAATCTTCTTGTGT+GGG + chr8.2:7644251-7644270 MS.gene24792:CDS 45.0%
GTACAATGAGCAAGGACAAC+TGG + chr8.2:7644653-7644672 MS.gene24792:CDS 45.0%
GTAGGGTCATATCCATCATC+AGG - chr8.2:7644408-7644427 None:intergenic 45.0%
TAGAGCGAACAACGAGGTTT+CGG - chr8.2:7644021-7644040 None:intergenic 45.0%
TCAATAGGCAGTGAGATGTC+TGG + chr8.2:7644210-7644229 MS.gene24792:CDS 45.0%
TCACTACCGTGAATACGTAC+CGG - chr8.2:7644492-7644511 None:intergenic 45.0%
TGGTGGGATATCCAATGTCA+CGG + chr8.2:7644230-7644249 MS.gene24792:CDS 45.0%
TTCTTGTGTGGGATTCTAGG+CGG + chr8.2:7644262-7644281 MS.gene24792:CDS 45.0%
! CTTGCTCATTGTACCGATCA+AGG - chr8.2:7644647-7644666 None:intergenic 45.0%
!! CTTATAACTGGAAGTGCCGT+AGG - chr8.2:7644426-7644445 None:intergenic 45.0%
AACTCCATGGCCATAGACAC+TGG - chr8.2:7644463-7644482 None:intergenic 50.0%
ATAAAGACTGCACCTGGACG+AGG + chr8.2:7644294-7644313 MS.gene24792:CDS 50.0%
ATAGGCAGTGAGATGTCTGG+TGG + chr8.2:7644213-7644232 MS.gene24792:CDS 50.0%
ATGGGCCATGCAGAAAGGTA+CGG - chr8.2:7644073-7644092 None:intergenic 50.0%
CAAGGTTCTCGCATGGAGAT+GGG - chr8.2:7644629-7644648 None:intergenic 50.0%
CGGTGGAGAATCTTCTTGTG+TGG + chr8.2:7644250-7644269 MS.gene24792:CDS 50.0%
CTAACCCGTACCTTTCTGCA+TGG + chr8.2:7644065-7644084 MS.gene24792:intron 50.0%
CTCCATGCGAGAACCTTGAT+CGG + chr8.2:7644631-7644650 MS.gene24792:CDS 50.0%
CTCGCATGGAGATGGGAAAA+TGG - chr8.2:7644622-7644641 None:intergenic 50.0%
GTGAGGATAAAGACTGCACC+TGG + chr8.2:7644288-7644307 MS.gene24792:CDS 50.0%
TACCGATCAAGGTTCTCGCA+TGG - chr8.2:7644636-7644655 None:intergenic 50.0%
TAGGCAGTGAGATGTCTGGT+GGG + chr8.2:7644214-7644233 MS.gene24792:CDS 50.0%
TCAAGGTTCTCGCATGGAGA+TGG - chr8.2:7644630-7644649 None:intergenic 50.0%
TCGTTGTTCGCTCTATGGTC+AGG + chr8.2:7644026-7644045 MS.gene24792:CDS 50.0%
TCTTGTGTGGGATTCTAGGC+GGG + chr8.2:7644263-7644282 MS.gene24792:CDS 50.0%
TGACCATAGAGCGAACAACG+AGG - chr8.2:7644027-7644046 None:intergenic 50.0%
TGGGATATCCAATGTCACGG+TGG + chr8.2:7644233-7644252 MS.gene24792:CDS 50.0%
TTCACCAGTGTCTATGGCCA+TGG + chr8.2:7644456-7644475 MS.gene24792:CDS 50.0%
!! AGGTACGGGTTAGTTGAGCT+AGG - chr8.2:7644058-7644077 None:intergenic 50.0%
!! GGTACGGGTTAGTTGAGCTA+GGG - chr8.2:7644057-7644076 None:intergenic 50.0%
AAGGCATGGGCCATGCAGAA+AGG - chr8.2:7644078-7644097 None:intergenic 55.0%
CTTGTGTGGGATTCTAGGCG+GGG + chr8.2:7644264-7644283 MS.gene24792:CDS 55.0%
! CGTGTGCCGGTACGTATTCA+CGG + chr8.2:7644483-7644502 MS.gene24792:CDS 55.0%
! TCTGCATGGCCCATGCCTTT+TGG + chr8.2:7644079-7644098 MS.gene24792:intron 55.0%
! TGGGCCATGCAGAAAGGTAC+GGG - chr8.2:7644072-7644091 None:intergenic 55.0%
AAGACTGCACCTGGACGAGG+CGG + chr8.2:7644297-7644316 MS.gene24792:CDS 60.0%
CTGGACGAGGCGGATATGTG+CGG + chr8.2:7644307-7644326 MS.gene24792:CDS 60.0%
GGCTTGCACAGACTCTTGCG+AGG + chr8.2:7643883-7643902 MS.gene24792:CDS 60.0%
TGGCCATGGAGTTCGTGTGC+CGG + chr8.2:7644470-7644489 MS.gene24792:CDS 60.0%
! GTACCGGCACACGAACTCCA+TGG - chr8.2:7644476-7644495 None:intergenic 60.0%
CGCACATATCCGCCTCGTCC+AGG - chr8.2:7644309-7644328 None:intergenic 65.0%
GGGATTCTAGGCGGGGTGTG+AGG + chr8.2:7644271-7644290 MS.gene24792:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 7643881 7644725 7643881 ID=MS.gene24792
chr8.2 mRNA 7643881 7644725 7643881 ID=MS.gene24792.t1;Parent=MS.gene24792
chr8.2 exon 7643881 7644047 7643881 ID=MS.gene24792.t1.exon1;Parent=MS.gene24792.t1
chr8.2 CDS 7643881 7644047 7643881 ID=cds.MS.gene24792.t1;Parent=MS.gene24792.t1
chr8.2 exon 7644200 7644725 7644200 ID=MS.gene24792.t1.exon2;Parent=MS.gene24792.t1
chr8.2 CDS 7644200 7644725 7644200 ID=cds.MS.gene24792.t1;Parent=MS.gene24792.t1
Gene Sequence

>MS.gene24792

ATGGCTTGCACAGACTCTTGCGAGGATATGTTGATAGAGGACTGTTACATAAGCGTGGGAGATGATGCAATAGCAATAAAGAGTGGTTGGGATCAGTATGGAATTGCTTATGGAAGGCCTTCCATGAATATATTGATCCGAAACCTCGTTGTTCGCTCTATGGTCAGGTGAATCCCTAGCTCAACTAACCCGTACCTTTCTGCATGGCCCATGCCTTTTGGCATATTTTTTTATGAAATGTTGATCTTTGTAGTTAGTGCTTACCTTCTTATCATATATTATGATTTTAATATGTTGATGATTTTATGAAATGAAACAGTGCTGGTATCTCAATAGGCAGTGAGATGTCTGGTGGGATATCCAATGTCACGGTGGAGAATCTTCTTGTGTGGGATTCTAGGCGGGGTGTGAGGATAAAGACTGCACCTGGACGAGGCGGATATGTGCGGCAAATAACTTATCGGAATATAACGTTTGAGAATGTCCGTGTTGGAATTGTGATGAAGACAGATTACAATGAACACCCTGATGATGGATATGACCCTACGGCACTTCCAGTTATAAGAGACATAAGCTTCACCAGTGTCTATGGCCATGGAGTTCGTGTGCCGGTACGTATTCACGGTAGTGAAGAGATTCCTGTGAGAAATGTAACTTTTCGTGACATGTCAGTTGGGTTAACCTACAAGAAGAAGCACATCTTTCAGTGTGCATTTGTACATGGCCGTGTAATAGGGACCATTTTCCCATCTCCATGCGAGAACCTTGATCGGTACAATGAGCAAGGACAACTGGTTAAACATTCCATGTCCCAGAATGTAACAGATATAGATTATGATTTTTGA
Protein sequence

>MS.gene24792.t1

MACTDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMVSAGISIGSEMSGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRVGIVMKTDYNEHPDDGYDPTALPVIRDISFTSVYGHGVRVPVRIHGSEEIPVRNVTFRDMSVGLTYKKKHIFQCAFVHGRVIGTIFPSPCENLDRYNEQGQLVKHSMSQNVTDIDYDF