Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25743.t1 | XP_013461155.1 | 95.8 | 355 | 13 | 1 | 1 | 353 | 1 | 355 | 6.50E-184 | 653.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25743.t1 | Q5EAE0 | 35.7 | 375 | 202 | 5 | 7 | 348 | 7 | 375 | 1.4e-57 | 224.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25743.t1 | A0A072UZF4 | 95.8 | 355 | 13 | 1 | 1 | 353 | 1 | 355 | 4.7e-184 | 653.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25743 | MS.gene063045 | PPI |
| MS.gene89501 | MS.gene25743 | PPI |
| MS.gene25743 | MS.gene010234 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25743.t1 | MTR_3g081480 | 98.592 | 355 | 3 | 1 | 1 | 353 | 1 | 355 | 0.0 | 723 |
| MS.gene25743.t1 | MTR_5g062720 | 36.074 | 377 | 200 | 5 | 7 | 348 | 8 | 378 | 5.40e-76 | 239 |
| MS.gene25743.t1 | MTR_4g094255 | 35.616 | 365 | 200 | 8 | 7 | 340 | 8 | 368 | 2.02e-71 | 227 |
| MS.gene25743.t1 | MTR_5g062720 | 32.781 | 302 | 162 | 5 | 7 | 273 | 8 | 303 | 4.79e-48 | 164 |
| MS.gene25743.t1 | MTR_4g094255 | 34.629 | 283 | 150 | 8 | 89 | 340 | 1 | 279 | 5.88e-45 | 156 |
| MS.gene25743.t1 | MTR_4g080800 | 32.243 | 214 | 105 | 8 | 159 | 348 | 273 | 470 | 2.54e-17 | 83.2 |
| MS.gene25743.t1 | MTR_2g083260 | 31.925 | 213 | 111 | 9 | 162 | 353 | 279 | 478 | 6.56e-16 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25743.t1 | AT3G22290 | 80.791 | 354 | 65 | 3 | 1 | 352 | 1 | 353 | 0.0 | 604 |
| MS.gene25743.t1 | AT3G22290 | 80.791 | 354 | 65 | 3 | 1 | 352 | 1 | 353 | 0.0 | 604 |
| MS.gene25743.t1 | AT1G36050 | 35.450 | 378 | 211 | 6 | 2 | 348 | 3 | 378 | 2.02e-73 | 233 |
| MS.gene25743.t1 | AT1G22200 | 34.121 | 381 | 214 | 6 | 1 | 348 | 2 | 378 | 1.09e-72 | 231 |
| MS.gene25743.t1 | AT1G36050 | 35.450 | 378 | 211 | 6 | 2 | 348 | 3 | 378 | 2.25e-72 | 233 |
| MS.gene25743.t1 | AT1G22200 | 33.333 | 339 | 189 | 6 | 1 | 306 | 2 | 336 | 2.58e-58 | 192 |
| MS.gene25743.t1 | AT4G27080 | 29.839 | 248 | 133 | 10 | 121 | 340 | 231 | 465 | 4.92e-20 | 91.3 |
| MS.gene25743.t1 | AT4G27080 | 29.839 | 248 | 133 | 10 | 121 | 340 | 283 | 517 | 6.40e-20 | 91.3 |
| MS.gene25743.t1 | AT3G20560 | 30.651 | 261 | 143 | 11 | 121 | 353 | 231 | 481 | 7.90e-19 | 87.8 |
| MS.gene25743.t1 | AT1G50950 | 30.415 | 217 | 121 | 8 | 152 | 348 | 271 | 477 | 5.13e-17 | 82.4 |
| MS.gene25743.t1 | AT1G50950 | 30.415 | 217 | 121 | 8 | 152 | 348 | 276 | 482 | 5.60e-17 | 82.4 |
Find 68 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATTCTGTTGCAGGTTTA+TGG | 0.190697 | 3.2:+71294206 | MS.gene25743:intron |
| GTTATGAATTCCTGGATATT+TGG | 0.195825 | 3.2:-71294791 | None:intergenic |
| TTATGAATTCCTGGATATTT+GGG | 0.205707 | 3.2:-71294790 | None:intergenic |
| AACAGTTATGGACAGATAAT+TGG | 0.226761 | 3.2:+71292185 | MS.gene25743:CDS |
| GATCATTGGTTTGATTATAA+TGG | 0.293746 | 3.2:+71289890 | MS.gene25743:CDS |
| GTTATCCATGATTTGTCATT+TGG | 0.304688 | 3.2:+71294766 | MS.gene25743:CDS |
| TGCCTCCTTCACCTTCTTGA+TGG | 0.309665 | 3.2:-71294081 | None:intergenic |
| AATGTCATATTTATATGAAT+TGG | 0.314883 | 3.2:-71290531 | None:intergenic |
| TTAGCCCATGCACTGAAATA+TGG | 0.324151 | 3.2:-71294262 | None:intergenic |
| CAGCTTCGTTTGAACAGTTA+TGG | 0.327126 | 3.2:+71292173 | MS.gene25743:intron |
| TTGATTGCAGTTTCGATCAT+TGG | 0.357208 | 3.2:+71289876 | MS.gene25743:intron |
| CGATCAAATTGACTAGTAAT+GGG | 0.358497 | 3.2:-71295033 | None:intergenic |
| TTAGATGTTCAAAGGGTTGC+TGG | 0.373432 | 3.2:+71294233 | MS.gene25743:CDS |
| GGTGGAACCTTTGCTGTAAC+AGG | 0.373701 | 3.2:+71295258 | MS.gene25743:CDS |
| TATATCTGATCTTGTTGAAA+AGG | 0.380648 | 3.2:+71292217 | MS.gene25743:CDS |
| TCAAGTGGGTTATGAATTCC+TGG | 0.392656 | 3.2:-71294799 | None:intergenic |
| TCCTTGATAGTGACAGTAAT+AGG | 0.399502 | 3.2:-71295186 | None:intergenic |
| CCGATCAAATTGACTAGTAA+TGG | 0.408677 | 3.2:-71295034 | None:intergenic |
| AAACATATATGTTGCACAAA+TGG | 0.412036 | 3.2:+71294283 | MS.gene25743:CDS |
| TACAACTTACACTGTTCATC+AGG | 0.414564 | 3.2:+71289947 | MS.gene25743:CDS |
| TACGTTGTTTCTGCACGAGT+TGG | 0.429726 | 3.2:+71289914 | MS.gene25743:CDS |
| CACCTAGCACGGCACAAAGC+CGG | 0.441915 | 3.2:-71295239 | None:intergenic |
| TTCCCTTCTTTACCTTGTGA+TGG | 0.448996 | 3.2:+71290552 | MS.gene25743:CDS |
| AAAACTCAATCTGGTGCTCT+TGG | 0.451292 | 3.2:+71289737 | MS.gene25743:CDS |
| GAGATATATCTATATTCAGT+TGG | 0.453984 | 3.2:-71294961 | None:intergenic |
| CAATTTGATCGGACATGGCC+AGG | 0.454262 | 3.2:+71295045 | MS.gene25743:CDS |
| TCATTTGGCCCCAAATATCC+AGG | 0.465213 | 3.2:+71294781 | MS.gene25743:CDS |
| AATTTCCATATTTCAGTGCA+TGG | 0.466918 | 3.2:+71294257 | MS.gene25743:CDS |
| TTGTTGCAGAAAACTCAATC+TGG | 0.467399 | 3.2:+71289728 | MS.gene25743:CDS |
| ACCTAGCACGGCACAAAGCC+GGG | 0.468081 | 3.2:-71295238 | None:intergenic |
| TGGATCTTGATACAAACATA+TGG | 0.471383 | 3.2:+71290746 | MS.gene25743:CDS |
| ACGTTGTTTCTGCACGAGTT+GGG | 0.475844 | 3.2:+71289915 | MS.gene25743:CDS |
| ATATCTGATCTTGTTGAAAA+GGG | 0.476430 | 3.2:+71292218 | MS.gene25743:CDS |
| GTGGATGCCATTGATATGTC+TGG | 0.484933 | 3.2:+71290712 | MS.gene25743:CDS |
| TGGGGCCAAATGACAAATCA+TGG | 0.487288 | 3.2:-71294771 | None:intergenic |
| GCCTATTACTGTCACTATCA+AGG | 0.504629 | 3.2:+71295185 | MS.gene25743:CDS |
| CGGCTTTGTGCCGTGCTAGG+TGG | 0.508099 | 3.2:+71295240 | MS.gene25743:CDS |
| ACCCGGCTTTGTGCCGTGCT+AGG | 0.512689 | 3.2:+71295237 | MS.gene25743:CDS |
| ATTTCCATATTTCAGTGCAT+GGG | 0.517261 | 3.2:+71294258 | MS.gene25743:CDS |
| TAACCATCACAAGGTAAAGA+AGG | 0.521720 | 3.2:-71290555 | None:intergenic |
| ATTTACATCAACAGGCATGC+TGG | 0.524484 | 3.2:+71295796 | MS.gene25743:intron |
| CTAGTCAATTTGATCGGACA+TGG | 0.531079 | 3.2:+71295040 | MS.gene25743:CDS |
| CAACAGGCATGCTGGACCGT+TGG | 0.533592 | 3.2:+71295804 | MS.gene25743:intron |
| ATCCTTGATGTCTCATCAAG+TGG | 0.543339 | 3.2:-71294814 | None:intergenic |
| AAAATTACCTGTTACAGCAA+AGG | 0.551485 | 3.2:-71295265 | None:intergenic |
| TTTCTCCAGATCTTCGATGC+GGG | 0.565812 | 3.2:+71294721 | MS.gene25743:intron |
| AGCAAAGGTTCCACCTAGCA+CGG | 0.569794 | 3.2:-71295250 | None:intergenic |
| CCATTACTAGTCAATTTGAT+CGG | 0.571487 | 3.2:+71295034 | MS.gene25743:CDS |
| AACCATCACAAGGTAAAGAA+GGG | 0.577515 | 3.2:-71290554 | None:intergenic |
| CACTGAAAATACCATCAAGA+AGG | 0.590106 | 3.2:+71294070 | MS.gene25743:CDS |
| TACCATCAAGAAGGTGAAGG+AGG | 0.599854 | 3.2:+71294079 | MS.gene25743:CDS |
| ACCCACTTGATGAGACATCA+AGG | 0.600922 | 3.2:+71294812 | MS.gene25743:CDS |
| GATCAAATTGACTAGTAATG+GGG | 0.602587 | 3.2:-71295032 | None:intergenic |
| AAATACCATCAAGAAGGTGA+AGG | 0.608112 | 3.2:+71294076 | MS.gene25743:CDS |
| TCCTTGATGTCTCATCAAGT+GGG | 0.612215 | 3.2:-71294813 | None:intergenic |
| ATCAAATTGACTAGTAATGG+GGG | 0.614743 | 3.2:-71295031 | None:intergenic |
| GTAACTGAGAACTGATTAGT+CGG | 0.619257 | 3.2:-71294997 | None:intergenic |
| AGGATTCTGCATGATGCGAG+TGG | 0.621286 | 3.2:+71294832 | MS.gene25743:CDS |
| TATGAATTCCTGGATATTTG+GGG | 0.621776 | 3.2:-71294789 | None:intergenic |
| CAACGAGTCTGTACATCCAA+CGG | 0.621907 | 3.2:-71295820 | None:intergenic |
| AACAAATGATCCTCTGTGCG+AGG | 0.627162 | 3.2:-71289710 | None:intergenic |
| TAATAAAATGAAGAAAACTA+CGG | 0.637932 | 3.2:-71295215 | None:intergenic |
| GATCATAACACACACAAGCA+TGG | 0.641030 | 3.2:+71292251 | MS.gene25743:CDS |
| TGCCGGTGCTAACCATCACA+AGG | 0.665432 | 3.2:-71290564 | None:intergenic |
| TATGTCTGGAAAACATGAGG+TGG | 0.673308 | 3.2:+71290726 | MS.gene25743:CDS |
| ATGTCTGTAGACTTGAAGCG+TGG | 0.684678 | 3.2:+71290498 | MS.gene25743:CDS |
| TGATATGTCTGGAAAACATG+AGG | 0.712936 | 3.2:+71290723 | MS.gene25743:CDS |
| CGATGCATTTCCTCGCACAG+AGG | 0.733486 | 3.2:+71289700 | MS.gene25743:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTTAATATAATAAGATA+TGG | - | chr3.2:71291164-71291183 | None:intergenic | 10.0% |
| !! | ATTTCTTAGTATTATAAATA+AGG | - | chr3.2:71291898-71291917 | None:intergenic | 10.0% |
| !!! | AACTTTTAAATACTATATAA+AGG | + | chr3.2:71294855-71294874 | MS.gene25743:CDS | 10.0% |
| !!! | TTTTTGTTTAATAAATTTCT+GGG | + | chr3.2:71292876-71292895 | MS.gene25743:intron | 10.0% |
| !! | AACAAAAAATCTAAACTTTA+AGG | - | chr3.2:71289800-71289819 | None:intergenic | 15.0% |
| !! | AATGTCATATTTATATGAAT+TGG | - | chr3.2:71290534-71290553 | None:intergenic | 15.0% |
| !! | ATATTAAGTTTCTTTCAAAT+TGG | - | chr3.2:71294181-71294200 | None:intergenic | 15.0% |
| !! | ATTACTTATTTAAACACAAA+CGG | - | chr3.2:71292426-71292445 | None:intergenic | 15.0% |
| !! | TAAAAGTTAAATTTAACATC+AGG | + | chr3.2:71292694-71292713 | MS.gene25743:intron | 15.0% |
| !! | TAAATAGTTTCTTAATATGT+TGG | + | chr3.2:71290849-71290868 | MS.gene25743:intron | 15.0% |
| !! | TAATAAAATGAAGAAAACTA+CGG | - | chr3.2:71295218-71295237 | None:intergenic | 15.0% |
| !! | TTCATTATATACATAAACTT+CGG | + | chr3.2:71291642-71291661 | MS.gene25743:intron | 15.0% |
| !! | TTTGATATGTTGATATTATT+TGG | + | chr3.2:71290373-71290392 | MS.gene25743:intron | 15.0% |
| !!! | ATTCATAATTTAAAACATGA+AGG | - | chr3.2:71294665-71294684 | None:intergenic | 15.0% |
| !!! | CTTTTTGTTTAATAAATTTC+TGG | + | chr3.2:71292875-71292894 | MS.gene25743:intron | 15.0% |
| !!! | GTTATTAAATATTGATTTTC+TGG | + | chr3.2:71295699-71295718 | MS.gene25743:intron | 15.0% |
| !!! | TCTTATTAAAGTTATTTCTT+TGG | - | chr3.2:71294589-71294608 | None:intergenic | 15.0% |
| !!! | TGTGTATTTTCTATTAAAAT+TGG | - | chr3.2:71292528-71292547 | None:intergenic | 15.0% |
| !!! | TTGTATTTAATTTTGGAATA+AGG | + | chr3.2:71290023-71290042 | MS.gene25743:intron | 15.0% |
| !!! | TTTTGTTTAATAAATTTCTG+GGG | + | chr3.2:71292877-71292896 | MS.gene25743:intron | 15.0% |
| !! | AAATAACCATTAATGATACA+GGG | - | chr3.2:71292129-71292148 | None:intergenic | 20.0% |
| !! | AATAAAAAACAACATTTGAC+TGG | + | chr3.2:71295401-71295420 | MS.gene25743:intron | 20.0% |
| !! | ACATAAAAAGAAATCCAAAA+AGG | - | chr3.2:71290792-71290811 | None:intergenic | 20.0% |
| !! | AGCTTAAAACTATAATCATA+TGG | - | chr3.2:71295322-71295341 | None:intergenic | 20.0% |
| !! | ATAGAGAGAAATTAAATCAT+AGG | - | chr3.2:71293779-71293798 | None:intergenic | 20.0% |
| !! | ATATGCTTATATCACTATAT+TGG | + | chr3.2:71291688-71291707 | MS.gene25743:intron | 20.0% |
| !! | ATTTAGAAAAACATGATTTC+TGG | - | chr3.2:71293851-71293870 | None:intergenic | 20.0% |
| !! | TAAATAACCATTAATGATAC+AGG | - | chr3.2:71292130-71292149 | None:intergenic | 20.0% |
| !! | TAACTGCAAATAAGTAAATA+AGG | + | chr3.2:71294514-71294533 | MS.gene25743:intron | 20.0% |
| !! | TTACTTATTTAAACACAAAC+GGG | - | chr3.2:71292425-71292444 | None:intergenic | 20.0% |
| !! | TTACTTATTTGCAGTTATTT+GGG | - | chr3.2:71294511-71294530 | None:intergenic | 20.0% |
| !! | TTTACTTATTTGCAGTTATT+TGG | - | chr3.2:71294512-71294531 | None:intergenic | 20.0% |
| !!! | AATTTCTTCTTTTTAATTCC+GGG | - | chr3.2:71291752-71291771 | None:intergenic | 20.0% |
| !!! | ATATCACTATATTGGTTTTT+GGG | + | chr3.2:71291696-71291715 | MS.gene25743:intron | 20.0% |
| !!! | ATGTTGTTAAAAAGTTTTAG+TGG | + | chr3.2:71291340-71291359 | MS.gene25743:intron | 20.0% |
| !!! | CAATTTCTTCTTTTTAATTC+CGG | - | chr3.2:71291753-71291772 | None:intergenic | 20.0% |
| !!! | CATTATACATTTATGAGTTT+TGG | + | chr3.2:71295089-71295108 | MS.gene25743:intron | 20.0% |
| !!! | CTAAACTTTAAGGAAAAAAA+TGG | - | chr3.2:71289790-71289809 | None:intergenic | 20.0% |
| !!! | GTTGTTACTTGTTAATTAAT+AGG | + | chr3.2:71292052-71292071 | MS.gene25743:intron | 20.0% |
| !!! | TAGATTCATTTCCTTTTTTT+GGG | + | chr3.2:71292364-71292383 | MS.gene25743:intron | 20.0% |
| !!! | TATATCACTATATTGGTTTT+TGG | + | chr3.2:71291695-71291714 | MS.gene25743:intron | 20.0% |
| !!! | TCTTGAATATTGTTTTAACA+TGG | + | chr3.2:71294896-71294915 | MS.gene25743:intron | 20.0% |
| !!! | TTCTAGGAAAAAATATTTCA+AGG | - | chr3.2:71294400-71294419 | None:intergenic | 20.0% |
| !!! | TTGAATTTTACACGTTAAAA+CGG | - | chr3.2:71292778-71292797 | None:intergenic | 20.0% |
| ! | AAAACCATCACTATCAAATT+AGG | - | chr3.2:71294704-71294723 | None:intergenic | 25.0% |
| ! | AAAATAGACTTAAGATCAGA+AGG | - | chr3.2:71291867-71291886 | None:intergenic | 25.0% |
| ! | AAACATATATGTTGCACAAA+TGG | + | chr3.2:71294283-71294302 | MS.gene25743:CDS | 25.0% |
| ! | AAATAGACTTAAGATCAGAA+GGG | - | chr3.2:71291866-71291885 | None:intergenic | 25.0% |
| ! | ACGATCTATTATTAAACTAC+AGG | + | chr3.2:71292846-71292865 | MS.gene25743:intron | 25.0% |
| ! | ACTTATGCTAATATACACAT+AGG | - | chr3.2:71290339-71290358 | None:intergenic | 25.0% |
| ! | AGAAATAGACATCAATTCAA+AGG | + | chr3.2:71293205-71293224 | MS.gene25743:intron | 25.0% |
| ! | AGGGATTAAGAATACTAAAA+AGG | - | chr3.2:71292110-71292129 | None:intergenic | 25.0% |
| ! | AGTTAAATTTAACATCAGGT+TGG | + | chr3.2:71292698-71292717 | MS.gene25743:intron | 25.0% |
| ! | ATATCTGATCTTGTTGAAAA+GGG | + | chr3.2:71292218-71292237 | MS.gene25743:CDS | 25.0% |
| ! | ATTTATGAACGTTCTTTGTT+TGG | - | chr3.2:71293670-71293689 | None:intergenic | 25.0% |
| ! | CAAACATACAAATTAACAGA+AGG | - | chr3.2:71291517-71291536 | None:intergenic | 25.0% |
| ! | GAAATAGACATCAATTCAAA+GGG | + | chr3.2:71293206-71293225 | MS.gene25743:intron | 25.0% |
| ! | GAGATATATCTATATTCAGT+TGG | - | chr3.2:71294964-71294983 | None:intergenic | 25.0% |
| ! | GCAAGAAACAAAATAAACTA+AGG | - | chr3.2:71295752-71295771 | None:intergenic | 25.0% |
| ! | GGGATTAAGAATACTAAAAA+GGG | - | chr3.2:71292109-71292128 | None:intergenic | 25.0% |
| ! | GTATTATAAATAAGGCCATT+CGG | - | chr3.2:71291890-71291909 | None:intergenic | 25.0% |
| ! | TAAAAATTGTCAACAGATGA+TGG | + | chr3.2:71293990-71294009 | MS.gene25743:intron | 25.0% |
| ! | TAGACAAATATTGCTTACTT+TGG | + | chr3.2:71290981-71291000 | MS.gene25743:intron | 25.0% |
| ! | TAGTGATATAAGCATATTGT+AGG | - | chr3.2:71291685-71291704 | None:intergenic | 25.0% |
| ! | TATATCTGATCTTGTTGAAA+AGG | + | chr3.2:71292217-71292236 | MS.gene25743:CDS | 25.0% |
| ! | TCAAAGGGATCTTATATATA+GGG | + | chr3.2:71293221-71293240 | MS.gene25743:intron | 25.0% |
| ! | TGTGTATATTAGCAAAAGTT+GGG | + | chr3.2:71290434-71290453 | MS.gene25743:intron | 25.0% |
| ! | TTAAGCTGTTTATCTAAACA+TGG | - | chr3.2:71290049-71290068 | None:intergenic | 25.0% |
| ! | TTATGAATTCCTGGATATTT+GGG | - | chr3.2:71294793-71294812 | None:intergenic | 25.0% |
| ! | TTCAAAGGGATCTTATATAT+AGG | + | chr3.2:71293220-71293239 | MS.gene25743:intron | 25.0% |
| !! | ATTTAGTTTAATTCTGTTGC+AGG | + | chr3.2:71294199-71294218 | MS.gene25743:intron | 25.0% |
| !! | GACAGACAAATTTTATAAGA+GGG | - | chr3.2:71293105-71293124 | None:intergenic | 25.0% |
| !! | GGATTTCTTTTTATGTGTTT+TGG | + | chr3.2:71290796-71290815 | MS.gene25743:intron | 25.0% |
| !! | GTTTTCTTCATTTTATTACC+CGG | + | chr3.2:71295220-71295239 | MS.gene25743:CDS | 25.0% |
| !! | TATTTAGTGCCTTTTTAGAT+TGG | - | chr3.2:71290311-71290330 | None:intergenic | 25.0% |
| !! | TCAATTATTCTGTTTTCTTC+TGG | + | chr3.2:71291598-71291617 | MS.gene25743:intron | 25.0% |
| !! | TCTTTTTCTCCATTTCATTA+GGG | - | chr3.2:71293188-71293207 | None:intergenic | 25.0% |
| !! | TTCTTTTTCTCCATTTCATT+AGG | - | chr3.2:71293189-71293208 | None:intergenic | 25.0% |
| !! | TTTTCATAAGTTCTTCAAGA+TGG | - | chr3.2:71290173-71290192 | None:intergenic | 25.0% |
| !!! | AGATTCATTTCCTTTTTTTG+GGG | + | chr3.2:71292365-71292384 | MS.gene25743:intron | 25.0% |
| !!! | AGGAAGAATTTTAATCTGTA+AGG | - | chr3.2:71295728-71295747 | None:intergenic | 25.0% |
| !!! | ATAGTTTTAAGCTATAGCTT+TGG | + | chr3.2:71295329-71295348 | MS.gene25743:intron | 25.0% |
| !!! | CTAAAAAGGCACTAAATAAA+AGG | + | chr3.2:71290313-71290332 | MS.gene25743:intron | 25.0% |
| !!! | CTTTGTTTGGTTCAAAATTT+TGG | - | chr3.2:71293657-71293676 | None:intergenic | 25.0% |
| !!! | CTTTTTTTGGGGATAATAAA+GGG | + | chr3.2:71292376-71292395 | MS.gene25743:intron | 25.0% |
| !!! | GATCATTGGTTTGATTATAA+TGG | + | chr3.2:71289890-71289909 | MS.gene25743:CDS | 25.0% |
| !!! | GTAGATTCATTTCCTTTTTT+TGG | + | chr3.2:71292363-71292382 | MS.gene25743:intron | 25.0% |
| !!! | GTTATTTACGCTAATTTGTT+TGG | + | chr3.2:71292142-71292161 | MS.gene25743:intron | 25.0% |
| !!! | TAAAAAGTTTTAGTGGAGAA+GGG | + | chr3.2:71291347-71291366 | MS.gene25743:intron | 25.0% |
| !!! | TATTTTTTCCTAGAACTTAC+AGG | + | chr3.2:71294405-71294424 | MS.gene25743:intron | 25.0% |
| !!! | TTAAAAAGTTTTAGTGGAGA+AGG | + | chr3.2:71291346-71291365 | MS.gene25743:intron | 25.0% |
| AAAATTACCTGTTACAGCAA+AGG | - | chr3.2:71295268-71295287 | None:intergenic | 30.0% | |
| AACAGTTATGGACAGATAAT+TGG | + | chr3.2:71292185-71292204 | MS.gene25743:CDS | 30.0% | |
| AACTGAAATAACACAACTTG+GGG | - | chr3.2:71291494-71291513 | None:intergenic | 30.0% | |
| AAGAGATAACTGATGAAGAA+AGG | - | chr3.2:71291453-71291472 | None:intergenic | 30.0% | |
| AATATGTTGGTATCCACTAT+AGG | + | chr3.2:71290862-71290881 | MS.gene25743:intron | 30.0% | |
| AATTTCCATATTTCAGTGCA+TGG | + | chr3.2:71294257-71294276 | MS.gene25743:CDS | 30.0% | |
| ACTTTGAATTAACCCTATAG+TGG | - | chr3.2:71290878-71290897 | None:intergenic | 30.0% | |
| AGTAATCTTGTCCTAAATGT+TGG | + | chr3.2:71292440-71292459 | MS.gene25743:intron | 30.0% | |
| ATATGTTGGTATCCACTATA+GGG | + | chr3.2:71290863-71290882 | MS.gene25743:intron | 30.0% | |
| ATCAAATTGACTAGTAATGG+GGG | - | chr3.2:71295034-71295053 | None:intergenic | 30.0% | |
| ATTCAATATGTCAGGAATCT+TGG | - | chr3.2:71293827-71293846 | None:intergenic | 30.0% | |
| ATTTCCATATTTCAGTGCAT+GGG | + | chr3.2:71294258-71294277 | MS.gene25743:CDS | 30.0% | |
| ATTTGGAAGGAAGAAAACAT+GGG | - | chr3.2:71293572-71293591 | None:intergenic | 30.0% | |
| CAAAAATACCCCTAATGAAA+TGG | + | chr3.2:71293176-71293195 | MS.gene25743:intron | 30.0% | |
| CAAAACTGTAGGTTAAAACA+TGG | + | chr3.2:71292304-71292323 | MS.gene25743:intron | 30.0% | |
| CCATTACTAGTCAATTTGAT+CGG | + | chr3.2:71295034-71295053 | MS.gene25743:CDS | 30.0% | |
| CCTTTATTATCCCCAAAAAA+AGG | - | chr3.2:71292378-71292397 | None:intergenic | 30.0% | |
| CGATCAAATTGACTAGTAAT+GGG | - | chr3.2:71295036-71295055 | None:intergenic | 30.0% | |
| CTAATATGTGTTGTGAAAAC+TGG | - | chr3.2:71295552-71295571 | None:intergenic | 30.0% | |
| CTGTGTATATTAGCAAAAGT+TGG | + | chr3.2:71290433-71290452 | MS.gene25743:intron | 30.0% | |
| CTTAATCCCTGTATCATTAA+TGG | + | chr3.2:71292120-71292139 | MS.gene25743:intron | 30.0% | |
| CTTCAAATTCAATCTCTGTT+TGG | - | chr3.2:71291107-71291126 | None:intergenic | 30.0% | |
| GAAACAAAATAAACTAAGGC+AGG | - | chr3.2:71295748-71295767 | None:intergenic | 30.0% | |
| GAACTGAAATAACACAACTT+GGG | - | chr3.2:71291495-71291514 | None:intergenic | 30.0% | |
| GACCTTATAAGTTAAACCTT+TGG | + | chr3.2:71292809-71292828 | MS.gene25743:intron | 30.0% | |
| GATCAAATTGACTAGTAATG+GGG | - | chr3.2:71295035-71295054 | None:intergenic | 30.0% | |
| GCATATAATTCCAAAACTGT+AGG | + | chr3.2:71292293-71292312 | MS.gene25743:intron | 30.0% | |
| GGGTTCATTATACAAAATGA+CGG | - | chr3.2:71293806-71293825 | None:intergenic | 30.0% | |
| GGTTCATTATACAAAATGAC+GGG | - | chr3.2:71293805-71293824 | None:intergenic | 30.0% | |
| GTAAGATAATAGTGCTATCA+CGG | + | chr3.2:71291278-71291297 | MS.gene25743:intron | 30.0% | |
| GTAGTAGATATTCCAGTTAA+AGG | - | chr3.2:71295292-71295311 | None:intergenic | 30.0% | |
| GTTATGAATTCCTGGATATT+TGG | - | chr3.2:71294794-71294813 | None:intergenic | 30.0% | |
| GTTCATTATACAAAATGACG+GGG | - | chr3.2:71293804-71293823 | None:intergenic | 30.0% | |
| TAAATCATAGGATTCAGCAA+GGG | - | chr3.2:71293767-71293786 | None:intergenic | 30.0% | |
| TATAGCATAAGTGCTTATTG+TGG | + | chr3.2:71290078-71290097 | MS.gene25743:intron | 30.0% | |
| TATGAATTCCTGGATATTTG+GGG | - | chr3.2:71294792-71294811 | None:intergenic | 30.0% | |
| TCAAATGAGCCAATCTAAAA+AGG | + | chr3.2:71290299-71290318 | MS.gene25743:intron | 30.0% | |
| TCTATTATTAAACTACAGGC+TGG | + | chr3.2:71292850-71292869 | MS.gene25743:intron | 30.0% | |
| TGAAAACTGAACTGTTATTC+AGG | - | chr3.2:71294922-71294941 | None:intergenic | 30.0% | |
| TGAAGAGGGACTTATAAAAA+GGG | - | chr3.2:71293127-71293146 | None:intergenic | 30.0% | |
| TGGATCTTGATACAAACATA+TGG | + | chr3.2:71290746-71290765 | MS.gene25743:CDS | 30.0% | |
| TTAAATCATAGGATTCAGCA+AGG | - | chr3.2:71293768-71293787 | None:intergenic | 30.0% | |
| TTAATAGGTTCTCCTATTGA+TGG | + | chr3.2:71291215-71291234 | MS.gene25743:intron | 30.0% | |
| TTAATTCTGTTGCAGGTTTA+TGG | + | chr3.2:71294206-71294225 | MS.gene25743:intron | 30.0% | |
| TTCAATATGTCAGGAATCTT+GGG | - | chr3.2:71293826-71293845 | None:intergenic | 30.0% | |
| TTCCTATTTATAGCGTGATA+GGG | - | chr3.2:71292012-71292031 | None:intergenic | 30.0% | |
| TTGAAGAGGGACTTATAAAA+AGG | - | chr3.2:71293128-71293147 | None:intergenic | 30.0% | |
| TTGGGACAGAATAATAAACA+AGG | - | chr3.2:71294493-71294512 | None:intergenic | 30.0% | |
| ! | AAACATGGTTTGCATTTGAT+TGG | + | chr3.2:71292319-71292338 | MS.gene25743:intron | 30.0% |
| ! | AACATGGTTTGCATTTGATT+GGG | + | chr3.2:71292320-71292339 | MS.gene25743:intron | 30.0% |
| ! | ATGTTTTCCAGACATATCAA+TGG | - | chr3.2:71290722-71290741 | None:intergenic | 30.0% |
| ! | CAGGTAATTTTTCCTTTAAC+TGG | + | chr3.2:71295277-71295296 | MS.gene25743:intron | 30.0% |
| ! | CTTTTTCTCCATTTCATTAG+GGG | - | chr3.2:71293187-71293206 | None:intergenic | 30.0% |
| ! | GGACAGACAAATTTTATAAG+AGG | - | chr3.2:71293106-71293125 | None:intergenic | 30.0% |
| ! | GTTATCCATGATTTGTCATT+TGG | + | chr3.2:71294766-71294785 | MS.gene25743:CDS | 30.0% |
| ! | TATTGTGATGGTGACTTAAT+AGG | + | chr3.2:71291200-71291219 | MS.gene25743:intron | 30.0% |
| ! | TCTTAAGTCTATTTTCCGAA+TGG | + | chr3.2:71291872-71291891 | MS.gene25743:intron | 30.0% |
| ! | TGCCAAAGGTTTAACTTATA+AGG | - | chr3.2:71292814-71292833 | None:intergenic | 30.0% |
| ! | TTCTGGGGAAATAAATTTCT+GGG | + | chr3.2:71292892-71292911 | MS.gene25743:intron | 30.0% |
| ! | TTGCTTACTTTGGAAGATTT+AGG | + | chr3.2:71290991-71291010 | MS.gene25743:intron | 30.0% |
| ! | TTTCTGGGGAAATAAATTTC+TGG | + | chr3.2:71292891-71292910 | MS.gene25743:intron | 30.0% |
| !! | ATGGTGTTTTAGATGTTCAA+AGG | + | chr3.2:71294225-71294244 | MS.gene25743:CDS | 30.0% |
| !! | GAGTTTCATTTTTCGTTTTG+AGG | + | chr3.2:71290611-71290630 | MS.gene25743:intron | 30.0% |
| !! | GATACCTAATTTGATAGTGA+TGG | + | chr3.2:71294697-71294716 | MS.gene25743:intron | 30.0% |
| !! | GTTTGGTTCAAAATTTTGGA+GGG | - | chr3.2:71293653-71293672 | None:intergenic | 30.0% |
| !! | TGGTGTTTTAGATGTTCAAA+GGG | + | chr3.2:71294226-71294245 | MS.gene25743:CDS | 30.0% |
| !! | TGTTTGGTTCAAAATTTTGG+AGG | - | chr3.2:71293654-71293673 | None:intergenic | 30.0% |
| !!! | AGCTTGTTAATAGACCTTTT+TGG | + | chr3.2:71290775-71290794 | MS.gene25743:intron | 30.0% |
| !!! | CATGTTTTAACCTACAGTTT+TGG | - | chr3.2:71292306-71292325 | None:intergenic | 30.0% |
| !!! | CCTTTTTTTGGGGATAATAA+AGG | + | chr3.2:71292375-71292394 | MS.gene25743:intron | 30.0% |
| !!! | GTTCTGTATTTTTTCCGATA+TGG | - | chr3.2:71290912-71290931 | None:intergenic | 30.0% |
| !!! | TGTATTTTTTCCGATATGGA+AGG | - | chr3.2:71290908-71290927 | None:intergenic | 30.0% |
| AAAAAATGGAGAAGGATGCA+GGG | + | chr3.2:71294106-71294125 | MS.gene25743:CDS | 35.0% | |
| AAAGTTGAGAGGATGTATCT+TGG | + | chr3.2:71293616-71293635 | MS.gene25743:intron | 35.0% | |
| AAATACCATCAAGAAGGTGA+AGG | + | chr3.2:71294076-71294095 | MS.gene25743:CDS | 35.0% | |
| AACATGTTAAATATGCGCAG+TGG | + | chr3.2:71292030-71292049 | MS.gene25743:intron | 35.0% | |
| AACATTTATCACCTGCAACA+TGG | + | chr3.2:71292962-71292981 | MS.gene25743:intron | 35.0% | |
| AACCATCACAAGGTAAAGAA+GGG | - | chr3.2:71290557-71290576 | None:intergenic | 35.0% | |
| AACTGATGAAGAAAGGAGTT+GGG | - | chr3.2:71291446-71291465 | None:intergenic | 35.0% | |
| AAGAAGTAGTTGAGAGAAGT+TGG | - | chr3.2:71291963-71291982 | None:intergenic | 35.0% | |
| AAGGGATTGTAGCAATTTCA+TGG | + | chr3.2:71291365-71291384 | MS.gene25743:intron | 35.0% | |
| ACAGATCACTATTAAGCTGA+GGG | - | chr3.2:71291050-71291069 | None:intergenic | 35.0% | |
| ACATGAAGCAGATAAAATGC+CGG | - | chr3.2:71290584-71290603 | None:intergenic | 35.0% | |
| ACCAACACATTTACATCAAC+AGG | + | chr3.2:71295788-71295807 | MS.gene25743:intron | 35.0% | |
| ACTTCAAACTAAATCCAACC+TGG | - | chr3.2:71295066-71295085 | None:intergenic | 35.0% | |
| AGAAAGGAGTTGGGAAAAAT+AGG | - | chr3.2:71291437-71291456 | None:intergenic | 35.0% | |
| AGAAGTAGTTGAGAGAAGTT+GGG | - | chr3.2:71291962-71291981 | None:intergenic | 35.0% | |
| AGATCTTCAGTCCAACATTT+AGG | - | chr3.2:71292454-71292473 | None:intergenic | 35.0% | |
| AGGGATCTTATATATAGGGA+CGG | + | chr3.2:71293225-71293244 | MS.gene25743:intron | 35.0% | |
| AGGGATTGTAGCAATTTCAT+GGG | + | chr3.2:71291366-71291385 | MS.gene25743:intron | 35.0% | |
| AGTTAAGTTTACGCAGTGTT+TGG | - | chr3.2:71293723-71293742 | None:intergenic | 35.0% | |
| ATAAGAGGGTCTTACACATA+AGG | - | chr3.2:71293091-71293110 | None:intergenic | 35.0% | |
| ATATCGTGAAGCGACAATAA+TGG | + | chr3.2:71293324-71293343 | MS.gene25743:intron | 35.0% | |
| CACTGAAAATACCATCAAGA+AGG | + | chr3.2:71294070-71294089 | MS.gene25743:CDS | 35.0% | |
| CAGACTGTTCAATATTGTGA+TGG | + | chr3.2:71291188-71291207 | MS.gene25743:intron | 35.0% | |
| CAGTTATTTAGTATGCAGTC+AGG | - | chr3.2:71291939-71291958 | None:intergenic | 35.0% | |
| CCGATCAAATTGACTAGTAA+TGG | - | chr3.2:71295037-71295056 | None:intergenic | 35.0% | |
| GAAGTGAAACATCCATCAAT+AGG | - | chr3.2:71291230-71291249 | None:intergenic | 35.0% | |
| GAGTGAATAGTGCATATACT+TGG | - | chr3.2:71292724-71292743 | None:intergenic | 35.0% | |
| GATTTGGAAGGAAGAAAACA+TGG | - | chr3.2:71293573-71293592 | None:intergenic | 35.0% | |
| GCAAGAATTCAAGCTAACTA+GGG | + | chr3.2:71295654-71295673 | MS.gene25743:intron | 35.0% | |
| GCTACATATGCAAAATCAAC+AGG | - | chr3.2:71295141-71295160 | None:intergenic | 35.0% | |
| GGAACTGAAATAACACAACT+TGG | - | chr3.2:71291496-71291515 | None:intergenic | 35.0% | |
| GGATATAGTATGCGCTTTAT+TGG | + | chr3.2:71292657-71292676 | MS.gene25743:intron | 35.0% | |
| GTAACTGAGAACTGATTAGT+CGG | - | chr3.2:71295000-71295019 | None:intergenic | 35.0% | |
| GTTCCTATTTATAGCGTGAT+AGG | - | chr3.2:71292013-71292032 | None:intergenic | 35.0% | |
| TAAAAAATGGAGAAGGATGC+AGG | + | chr3.2:71294105-71294124 | MS.gene25743:CDS | 35.0% | |
| TAACCATCACAAGGTAAAGA+AGG | - | chr3.2:71290558-71290577 | None:intergenic | 35.0% | |
| TAACTGATGAAGAAAGGAGT+TGG | - | chr3.2:71291447-71291466 | None:intergenic | 35.0% | |
| TACAACTTACACTGTTCATC+AGG | + | chr3.2:71289947-71289966 | MS.gene25743:CDS | 35.0% | |
| TACCCTATCACGCTATAAAT+AGG | + | chr3.2:71292007-71292026 | MS.gene25743:intron | 35.0% | |
| TATATCCGACATGATCATAG+AGG | - | chr3.2:71292644-71292663 | None:intergenic | 35.0% | |
| TATTCACTCTTAATCCCCAT+CGG | + | chr3.2:71292735-71292754 | MS.gene25743:intron | 35.0% | |
| TCAATCTCGCAAGTCATAAT+CGG | - | chr3.2:71295451-71295470 | None:intergenic | 35.0% | |
| TCTGGGGAAATAAATTTCTG+GGG | + | chr3.2:71292893-71292912 | MS.gene25743:intron | 35.0% | |
| TCTTACACTAGTGACTGATA+TGG | - | chr3.2:71291264-71291283 | None:intergenic | 35.0% | |
| TCTTGCAGAAAATGCTAATC+AGG | - | chr3.2:71295640-71295659 | None:intergenic | 35.0% | |
| TGATATGTCTGGAAAACATG+AGG | + | chr3.2:71290723-71290742 | MS.gene25743:CDS | 35.0% | |
| TGCAAGAATTCAAGCTAACT+AGG | + | chr3.2:71295653-71295672 | MS.gene25743:intron | 35.0% | |
| TGCAGGTGATAAATGTTGAA+TGG | - | chr3.2:71292959-71292978 | None:intergenic | 35.0% | |
| TGGTTCAACTGTATTTGTAC+CGG | + | chr3.2:71295421-71295440 | MS.gene25743:intron | 35.0% | |
| TTGATTGCAGTTTCGATCAT+TGG | + | chr3.2:71289876-71289895 | MS.gene25743:intron | 35.0% | |
| TTGTTGCAGAAAACTCAATC+TGG | + | chr3.2:71289728-71289747 | MS.gene25743:CDS | 35.0% | |
| TTTGGAAGGAAGAAAACATG+GGG | - | chr3.2:71293571-71293590 | None:intergenic | 35.0% | |
| ! | AATTTGAAGTTTCCTATGCG+AGG | + | chr3.2:71291118-71291137 | MS.gene25743:intron | 35.0% |
| ! | AGTCTTGTATCCTTCCATAT+CGG | + | chr3.2:71290895-71290914 | MS.gene25743:intron | 35.0% |
| ! | ATAGGTTTTTCGTCCATTGT+TGG | - | chr3.2:71291419-71291438 | None:intergenic | 35.0% |
| ! | ATTGATGGATGTTTCACTTC+TGG | + | chr3.2:71291230-71291249 | MS.gene25743:intron | 35.0% |
| ! | ATTTGAAGTTTCCTATGCGA+GGG | + | chr3.2:71291119-71291138 | MS.gene25743:intron | 35.0% |
| ! | ATTTTCAGTGGCTTCATCAA+AGG | - | chr3.2:71294060-71294079 | None:intergenic | 35.0% |
| ! | GAGGCATTAAAAAATGGAGA+AGG | + | chr3.2:71294098-71294117 | MS.gene25743:CDS | 35.0% |
| ! | TTGATGGATGTTTCACTTCT+GGG | + | chr3.2:71291231-71291250 | MS.gene25743:intron | 35.0% |
| ! | TTTCTGGCATTCAATATGTC+AGG | - | chr3.2:71293835-71293854 | None:intergenic | 35.0% |
| !! | CAAAATTTTGGAGGGAATTG+AGG | - | chr3.2:71293645-71293664 | None:intergenic | 35.0% |
| !! | CTTCTTGATGGTATTTTCAG+TGG | - | chr3.2:71294072-71294091 | None:intergenic | 35.0% |
| !! | GGTTATTTTCATTTGACGAC+TGG | + | chr3.2:71292341-71292360 | MS.gene25743:intron | 35.0% |
| !! | GGTTGGATTTAGTTTGAAGT+TGG | + | chr3.2:71295066-71295085 | MS.gene25743:intron | 35.0% |
| !! | GTGAAGGAGGCATTAAAAAA+TGG | + | chr3.2:71294092-71294111 | MS.gene25743:CDS | 35.0% |
| !! | TCCTTGATAGTGACAGTAAT+AGG | - | chr3.2:71295189-71295208 | None:intergenic | 35.0% |
| !! | TTGCGAGATTGACTGATTTT+CGG | + | chr3.2:71295459-71295478 | MS.gene25743:intron | 35.0% |
| !!! | ATTGACTGATTTTCGGGTTA+AGG | + | chr3.2:71295466-71295485 | MS.gene25743:intron | 35.0% |
| AAAACTCAATCTGGTGCTCT+TGG | + | chr3.2:71289737-71289756 | MS.gene25743:CDS | 40.0% | |
| AGCAGCTAGTATACCAACAA+TGG | + | chr3.2:71291403-71291422 | MS.gene25743:intron | 40.0% | |
| ATCCTTGATGTCTCATCAAG+TGG | - | chr3.2:71294817-71294836 | None:intergenic | 40.0% | |
| ATGCATCTTGTAGCTTGAAG+AGG | - | chr3.2:71293142-71293161 | None:intergenic | 40.0% | |
| ATGGGTGACAATAGATGTGA+TGG | + | chr3.2:71293376-71293395 | MS.gene25743:intron | 40.0% | |
| ATTCACTCTTAATCCCCATC+GGG | + | chr3.2:71292736-71292755 | MS.gene25743:intron | 40.0% | |
| ATTTACATCAACAGGCATGC+TGG | + | chr3.2:71295796-71295815 | MS.gene25743:intron | 40.0% | |
| CACAGATCACTATTAAGCTG+AGG | - | chr3.2:71291051-71291070 | None:intergenic | 40.0% | |
| CAGCTTCGTTTGAACAGTTA+TGG | + | chr3.2:71292173-71292192 | MS.gene25743:intron | 40.0% | |
| CTAGTCAATTTGATCGGACA+TGG | + | chr3.2:71295040-71295059 | MS.gene25743:CDS | 40.0% | |
| GATCATAACACACACAAGCA+TGG | + | chr3.2:71292251-71292270 | MS.gene25743:CDS | 40.0% | |
| GATCTTATATATAGGGACGG+AGG | + | chr3.2:71293228-71293247 | MS.gene25743:intron | 40.0% | |
| GCCTATTACTGTCACTATCA+AGG | + | chr3.2:71295185-71295204 | MS.gene25743:CDS | 40.0% | |
| GCCTGTTGATGTAAATGTGT+TGG | - | chr3.2:71295792-71295811 | None:intergenic | 40.0% | |
| GGACTGAAGATCTCAATGAA+AGG | + | chr3.2:71292461-71292480 | MS.gene25743:intron | 40.0% | |
| TACCTGAACCTGTAAGTTCT+AGG | - | chr3.2:71294416-71294435 | None:intergenic | 40.0% | |
| TATGTCTGGAAAACATGAGG+TGG | + | chr3.2:71290726-71290745 | MS.gene25743:CDS | 40.0% | |
| TCACAGCTTATGAGAGAGAA+GGG | - | chr3.2:71290934-71290953 | None:intergenic | 40.0% | |
| TCCTTGATGTCTCATCAAGT+GGG | - | chr3.2:71294816-71294835 | None:intergenic | 40.0% | |
| TCTCCCAAAAGCTTAAGCTA+AGG | - | chr3.2:71292597-71292616 | None:intergenic | 40.0% | |
| TGCATCTTGTAGCTTGAAGA+GGG | - | chr3.2:71293141-71293160 | None:intergenic | 40.0% | |
| TTACACATAAGGACACAGGT+AGG | - | chr3.2:71293080-71293099 | None:intergenic | 40.0% | |
| TTAGATGTTCAAAGGGTTGC+TGG | + | chr3.2:71294233-71294252 | MS.gene25743:CDS | 40.0% | |
| TTAGCCCATGCACTGAAATA+TGG | - | chr3.2:71294265-71294284 | None:intergenic | 40.0% | |
| TTATCACCTGCAACATGGAA+AGG | + | chr3.2:71292967-71292986 | MS.gene25743:intron | 40.0% | |
| TTCACAGCTTATGAGAGAGA+AGG | - | chr3.2:71290935-71290954 | None:intergenic | 40.0% | |
| TTCCCTTCTTTACCTTGTGA+TGG | + | chr3.2:71290552-71290571 | MS.gene25743:CDS | 40.0% | |
| TTCCTAGAACTTACAGGTTC+AGG | + | chr3.2:71294411-71294430 | MS.gene25743:intron | 40.0% | |
| TTCTTCCCCTTGCAAATCAA+AGG | - | chr3.2:71293005-71293024 | None:intergenic | 40.0% | |
| ! | CTGCCTTAGCTTAAGCTTTT+GGG | + | chr3.2:71292591-71292610 | MS.gene25743:intron | 40.0% |
| ! | CTTTTTCTGCGATTCTCTGT+TGG | + | chr3.2:71290678-71290697 | MS.gene25743:intron | 40.0% |
| ! | GTGACAATAGATGTGATGGA+GGG | + | chr3.2:71293380-71293399 | MS.gene25743:intron | 40.0% |
| ! | GTTTTTGTCGAATGTGCCAA+AGG | - | chr3.2:71292828-71292847 | None:intergenic | 40.0% |
| ! | TCTGCCTTAGCTTAAGCTTT+TGG | + | chr3.2:71292590-71292609 | MS.gene25743:intron | 40.0% |
| ! | TGGTGATGACATAAAGGTAG+AGG | + | chr3.2:71293512-71293531 | MS.gene25743:intron | 40.0% |
| ! | TTTTCTCCAGATCTTCGATG+CGG | + | chr3.2:71294720-71294739 | MS.gene25743:intron | 40.0% |
| !! | AGGGAAACCTTTGATTTGCA+AGG | + | chr3.2:71292995-71293014 | MS.gene25743:intron | 40.0% |
| !! | GGAAACCTTTGATTTGCAAG+GGG | + | chr3.2:71292997-71293016 | MS.gene25743:intron | 40.0% |
| !! | GGGAAACCTTTGATTTGCAA+GGG | + | chr3.2:71292996-71293015 | MS.gene25743:intron | 40.0% |
| !! | GGTTTAAGTTGGAGAGTTCT+CGG | + | chr3.2:71293479-71293498 | MS.gene25743:intron | 40.0% |
| !! | TCAAGTGGGTTATGAATTCC+TGG | - | chr3.2:71294802-71294821 | None:intergenic | 40.0% |
| !! | TCTGAAAGAGCATTTGCTCT+GGG | - | chr3.2:71291823-71291842 | None:intergenic | 40.0% |
| !! | TGCGAGATTGACTGATTTTC+GGG | + | chr3.2:71295460-71295479 | MS.gene25743:intron | 40.0% |
| !!! | GCTTTTGGGAGAGTATTTCT+TGG | + | chr3.2:71292605-71292624 | MS.gene25743:intron | 40.0% |
| !!! | TCTGTTGGCAGTTTTAAGTG+TGG | + | chr3.2:71290693-71290712 | MS.gene25743:intron | 40.0% |
| AAACGGGAATGAGTTGTGGT+AGG | - | chr3.2:71292409-71292428 | None:intergenic | 45.0% | |
| AAATCCCTCCCAATGTTGGA+GGG | + | chr3.2:71293588-71293607 | MS.gene25743:intron | 45.0% | |
| AACAAATGATCCTCTGTGCG+AGG | - | chr3.2:71289713-71289732 | None:intergenic | 45.0% | |
| AACATTGGGAGGGATTTGGA+AGG | - | chr3.2:71293585-71293604 | None:intergenic | 45.0% | |
| AACCTCAAACCATCACTGTC+TGG | - | chr3.2:71293412-71293431 | None:intergenic | 45.0% | |
| AAGTTTACGCAGTGTTTGGC+AGG | - | chr3.2:71293719-71293738 | None:intergenic | 45.0% | |
| ACACAAACGGGAATGAGTTG+TGG | - | chr3.2:71292413-71292432 | None:intergenic | 45.0% | |
| ACCCACTTGATGAGACATCA+AGG | + | chr3.2:71294812-71294831 | MS.gene25743:CDS | 45.0% | |
| AGTTTACGCAGTGTTTGGCA+GGG | - | chr3.2:71293718-71293737 | None:intergenic | 45.0% | |
| ATCATAGGATTCAGCAAGGG+TGG | - | chr3.2:71293764-71293783 | None:intergenic | 45.0% | |
| ATGTCGCTATGATAGGAACC+CGG | + | chr3.2:71291731-71291750 | MS.gene25743:intron | 45.0% | |
| ATGTCTGTAGACTTGAAGCG+TGG | + | chr3.2:71290498-71290517 | MS.gene25743:CDS | 45.0% | |
| CAACGAGTCTGTACATCCAA+CGG | - | chr3.2:71295823-71295842 | None:intergenic | 45.0% | |
| CAGAGCCTCTATGATCATGT+CGG | + | chr3.2:71292636-71292655 | MS.gene25743:intron | 45.0% | |
| CATCGGGCTCATATGTAAGA+GGG | + | chr3.2:71292752-71292771 | MS.gene25743:intron | 45.0% | |
| CTCTTACATATGAGCCCGAT+GGG | - | chr3.2:71292753-71292772 | None:intergenic | 45.0% | |
| GACAATAATGGTGTGGAGCA+TGG | + | chr3.2:71293336-71293355 | MS.gene25743:intron | 45.0% | |
| GCAAGTCATAATCGGTGAAC+CGG | - | chr3.2:71295443-71295462 | None:intergenic | 45.0% | |
| GGGACAATGAAGAGAAGATG+AGG | - | chr3.2:71293696-71293715 | None:intergenic | 45.0% | |
| GGTCTTACACATAAGGACAC+AGG | - | chr3.2:71293084-71293103 | None:intergenic | 45.0% | |
| GGTGACAATAGATGTGATGG+AGG | + | chr3.2:71293379-71293398 | MS.gene25743:intron | 45.0% | |
| GTGAAGCGACAATAATGGTG+TGG | + | chr3.2:71293329-71293348 | MS.gene25743:intron | 45.0% | |
| GTGGATGCCATTGATATGTC+TGG | + | chr3.2:71290712-71290731 | MS.gene25743:CDS | 45.0% | |
| TACCATCAAGAAGGTGAAGG+AGG | + | chr3.2:71294079-71294098 | MS.gene25743:CDS | 45.0% | |
| TACCTTGTGATGGTTAGCAC+CGG | + | chr3.2:71290562-71290581 | MS.gene25743:intron | 45.0% | |
| TCATTTGGCCCCAAATATCC+AGG | + | chr3.2:71294781-71294800 | MS.gene25743:CDS | 45.0% | |
| TCTTACATATGAGCCCGATG+GGG | - | chr3.2:71292752-71292771 | None:intergenic | 45.0% | |
| TGATAGGGTAACTGCTGATG+CGG | - | chr3.2:71291997-71292016 | None:intergenic | 45.0% | |
| TGGGGCCAAATGACAAATCA+TGG | - | chr3.2:71294774-71294793 | None:intergenic | 45.0% | |
| TTCCAAATCCCTCCCAATGT+TGG | + | chr3.2:71293584-71293603 | MS.gene25743:intron | 45.0% | |
| TTTCTCCAGATCTTCGATGC+GGG | + | chr3.2:71294721-71294740 | MS.gene25743:intron | 45.0% | |
| ! | AGTGATGGTTTGAGGTTGTC+TGG | + | chr3.2:71293415-71293434 | MS.gene25743:intron | 45.0% |
| ! | ATTCGTCGACAAGTTGAACG+AGG | + | chr3.2:71295517-71295536 | MS.gene25743:intron | 45.0% |
| ! | GGAGAGTGGTGATGACATAA+AGG | + | chr3.2:71293506-71293525 | MS.gene25743:intron | 45.0% |
| ! | TTTAGCTCCCCTCCAACATT+GGG | - | chr3.2:71293599-71293618 | None:intergenic | 45.0% |
| !! | ACGTTGTTTCTGCACGAGTT+GGG | + | chr3.2:71289915-71289934 | MS.gene25743:CDS | 45.0% |
| !! | AGCATTTGCTCTGGGATTAC+AGG | - | chr3.2:71291815-71291834 | None:intergenic | 45.0% |
| !! | CATTTGCTCTGGGATTACAG+GGG | - | chr3.2:71291813-71291832 | None:intergenic | 45.0% |
| !! | CTCTGAAAGAGCATTTGCTC+TGG | - | chr3.2:71291824-71291843 | None:intergenic | 45.0% |
| !! | GCATTTGCTCTGGGATTACA+GGG | - | chr3.2:71291814-71291833 | None:intergenic | 45.0% |
| !! | TACGTTGTTTCTGCACGAGT+TGG | + | chr3.2:71289914-71289933 | MS.gene25743:CDS | 45.0% |
| !! | TGGGAGAGTATTTCTTGGCA+CGG | + | chr3.2:71292610-71292629 | MS.gene25743:intron | 45.0% |
| !! | AGTATTTATTATTATTATAA+GGG | - | chr3.2:71293056-71293075 | None:intergenic | 5.0% |
| !! | TAGTATTTATTATTATTATA+AGG | - | chr3.2:71293057-71293076 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTGTATTTAATTT+TGG | + | chr3.2:71290016-71290035 | MS.gene25743:intron | 5.0% |
| AAATCCACTGCCACCAACGT+TGG | - | chr3.2:71293542-71293561 | None:intergenic | 50.0% | |
| AATCCACTGCCACCAACGTT+GGG | - | chr3.2:71293541-71293560 | None:intergenic | 50.0% | |
| AATCCCTCCCAATGTTGGAG+GGG | + | chr3.2:71293589-71293608 | MS.gene25743:intron | 50.0% | |
| AGCAAAGGTTCCACCTAGCA+CGG | - | chr3.2:71295253-71295272 | None:intergenic | 50.0% | |
| AGCCAGACAGTGATGGTTTG+AGG | + | chr3.2:71293407-71293426 | MS.gene25743:intron | 50.0% | |
| AGGATTCTGCATGATGCGAG+TGG | + | chr3.2:71294832-71294851 | MS.gene25743:CDS | 50.0% | |
| CAAATCCCTCCCAATGTTGG+AGG | + | chr3.2:71293587-71293606 | MS.gene25743:intron | 50.0% | |
| CAATTTGATCGGACATGGCC+AGG | + | chr3.2:71295045-71295064 | MS.gene25743:CDS | 50.0% | |
| CCATCGGGCTCATATGTAAG+AGG | + | chr3.2:71292751-71292770 | MS.gene25743:intron | 50.0% | |
| CCTCTTACATATGAGCCCGA+TGG | - | chr3.2:71292754-71292773 | None:intergenic | 50.0% | |
| CGAATCGAGAACGACGAATC+AGG | - | chr3.2:71295502-71295521 | None:intergenic | 50.0% | |
| CTCCAACATTGGGAGGGATT+TGG | - | chr3.2:71293589-71293608 | None:intergenic | 50.0% | |
| CTGCTCCATGTCGCTATGAT+AGG | + | chr3.2:71291724-71291743 | MS.gene25743:intron | 50.0% | |
| CTGGCAGTGGTGGTTTAAGT+TGG | + | chr3.2:71293468-71293487 | MS.gene25743:intron | 50.0% | |
| GCAACATGGAAAGGAGGAGA+GGG | + | chr3.2:71292976-71292995 | MS.gene25743:intron | 50.0% | |
| GGGTTCCTATCATAGCGACA+TGG | - | chr3.2:71291732-71291751 | None:intergenic | 50.0% | |
| GTTTACGCAGTGTTTGGCAG+GGG | - | chr3.2:71293717-71293736 | None:intergenic | 50.0% | |
| TCAAACCATCACTGTCTGGC+TGG | - | chr3.2:71293408-71293427 | None:intergenic | 50.0% | |
| TCACCTGCAACATGGAAAGG+AGG | + | chr3.2:71292970-71292989 | MS.gene25743:intron | 50.0% | |
| TCTCCTCCTTTCCATGTTGC+AGG | - | chr3.2:71292976-71292995 | None:intergenic | 50.0% | |
| TCTTTCCCGCATCGAAGATC+TGG | - | chr3.2:71294729-71294748 | None:intergenic | 50.0% | |
| TGCAACATGGAAAGGAGGAG+AGG | + | chr3.2:71292975-71292994 | MS.gene25743:intron | 50.0% | |
| TGCCTCCTTCACCTTCTTGA+TGG | - | chr3.2:71294084-71294103 | None:intergenic | 50.0% | |
| TTCCTATGCGAGGGTCGTTT+GGG | + | chr3.2:71291128-71291147 | MS.gene25743:intron | 50.0% | |
| TTTACGCAGTGTTTGGCAGG+GGG | - | chr3.2:71293716-71293735 | None:intergenic | 50.0% | |
| TTTCCTATGCGAGGGTCGTT+TGG | + | chr3.2:71291127-71291146 | MS.gene25743:intron | 50.0% | |
| ! | AGCATGGTGTCAATGACGGA+GGG | + | chr3.2:71293352-71293371 | MS.gene25743:intron | 50.0% |
| ! | CAAGTTGAACGAGGCGGTAT+AGG | + | chr3.2:71295526-71295545 | MS.gene25743:intron | 50.0% |
| ! | CTTTAGCTCCCCTCCAACAT+TGG | - | chr3.2:71293600-71293619 | None:intergenic | 50.0% |
| ! | GGTGGAACCTTTGCTGTAAC+AGG | + | chr3.2:71295258-71295277 | MS.gene25743:CDS | 50.0% |
| ! | GTGGAGCATGGTGTCAATGA+CGG | + | chr3.2:71293348-71293367 | MS.gene25743:intron | 50.0% |
| AGTTGGAGAGTTCTCGGCAG+TGG | + | chr3.2:71293485-71293504 | MS.gene25743:intron | 55.0% | |
| ATCCCAAACGACCCTCGCAT+AGG | - | chr3.2:71291133-71291152 | None:intergenic | 55.0% | |
| CAAGTTCTGCCACGTAGTGG+CGG | + | chr3.2:71293267-71293286 | MS.gene25743:intron | 55.0% | |
| CGATATCCTCCATGCCACCA+TGG | - | chr3.2:71293310-71293329 | None:intergenic | 55.0% | |
| CGATGCATTTCCTCGCACAG+AGG | + | chr3.2:71289700-71289719 | MS.gene25743:CDS | 55.0% | |
| GGAGGGGAGCTAAAGTTGAG+AGG | + | chr3.2:71293605-71293624 | MS.gene25743:intron | 55.0% | |
| GTTGTCTGGATGCCTAGCAG+AGG | + | chr3.2:71293429-71293448 | MS.gene25743:intron | 55.0% | |
| TGCCAAGTTCTGCCACGTAG+TGG | + | chr3.2:71293264-71293283 | MS.gene25743:intron | 55.0% | |
| TGGTTGAGGATGCCAGACCA+TGG | + | chr3.2:71293290-71293309 | MS.gene25743:intron | 55.0% | |
| TTGAGGATGCCAGACCATGG+TGG | + | chr3.2:71293293-71293312 | MS.gene25743:intron | 55.0% | |
| TTGATCGGACATGGCCAGGT+TGG | + | chr3.2:71295049-71295068 | MS.gene25743:intron | 55.0% | |
| ! | CGTCGACAAGTTGAACGAGG+CGG | + | chr3.2:71295520-71295539 | MS.gene25743:intron | 55.0% |
| ! | GAGCATGGTGTCAATGACGG+AGG | + | chr3.2:71293351-71293370 | MS.gene25743:intron | 55.0% |
| ! | GTGTCAATGACGGAGGGCAT+GGG | + | chr3.2:71293358-71293377 | MS.gene25743:intron | 55.0% |
| ! | TGCCGGTGCTAACCATCACA+AGG | - | chr3.2:71290567-71290586 | None:intergenic | 55.0% |
| ACCTAGCACGGCACAAAGCC+GGG | - | chr3.2:71295241-71295260 | None:intergenic | 60.0% | |
| AGCTCCCCTCCAACATTGGG+AGG | - | chr3.2:71293596-71293615 | None:intergenic | 60.0% | |
| AGGTAGAGGCTGCCCAACGT+TGG | + | chr3.2:71293526-71293545 | MS.gene25743:intron | 60.0% | |
| CAACAGGCATGCTGGACCGT+TGG | + | chr3.2:71295804-71295823 | MS.gene25743:intron | 60.0% | |
| CACCTAGCACGGCACAAAGC+CGG | - | chr3.2:71295242-71295261 | None:intergenic | 60.0% | |
| CGCCACTACGTGGCAGAACT+TGG | - | chr3.2:71293269-71293288 | None:intergenic | 60.0% | |
| GAGTTCTCGGCAGTGGAGAG+TGG | + | chr3.2:71293492-71293511 | MS.gene25743:intron | 60.0% | |
| GATGCCAGACCATGGTGGCA+TGG | + | chr3.2:71293298-71293317 | MS.gene25743:intron | 60.0% | |
| GCTCCCCTCCAACATTGGGA+GGG | - | chr3.2:71293595-71293614 | None:intergenic | 60.0% | |
| GGATGCCTAGCAGAGGCAGT+GGG | + | chr3.2:71293436-71293455 | MS.gene25743:intron | 60.0% | |
| TAGAGGCTGCCCAACGTTGG+TGG | + | chr3.2:71293529-71293548 | MS.gene25743:intron | 60.0% | |
| TAGCAGAGGCAGTGGGTGTC+AGG | + | chr3.2:71293443-71293462 | MS.gene25743:intron | 60.0% | |
| TCCTCCATGCCACCATGGTC+TGG | - | chr3.2:71293305-71293324 | None:intergenic | 60.0% | |
| TGACACCCACTGCCTCTGCT+AGG | - | chr3.2:71293444-71293463 | None:intergenic | 60.0% | |
| TGGATGCCTAGCAGAGGCAG+TGG | + | chr3.2:71293435-71293454 | MS.gene25743:intron | 60.0% | |
| ! | GGTGTCAATGACGGAGGGCA+TGG | + | chr3.2:71293357-71293376 | MS.gene25743:intron | 60.0% |
| AGGCAGTGGGTGTCAGGTGC+TGG | + | chr3.2:71293449-71293468 | MS.gene25743:intron | 65.0% | |
| CCACGTAGTGGCGGTGGTTG+AGG | + | chr3.2:71293276-71293295 | MS.gene25743:intron | 65.0% | |
| CCTCAACCACCGCCACTACG+TGG | - | chr3.2:71293279-71293298 | None:intergenic | 65.0% | |
| GCCAGACCATGGTGGCATGG+AGG | + | chr3.2:71293301-71293320 | MS.gene25743:intron | 65.0% | |
| GGGTGCCAGCCAGACAGTGA+TGG | + | chr3.2:71293400-71293419 | MS.gene25743:intron | 65.0% | |
| GTTCTGCCACGTAGTGGCGG+TGG | + | chr3.2:71293270-71293289 | MS.gene25743:intron | 65.0% | |
| ! | ACCCGGCTTTGTGCCGTGCT+AGG | + | chr3.2:71295237-71295256 | MS.gene25743:CDS | 65.0% |
| ! | CGGCTTTGTGCCGTGCTAGG+TGG | + | chr3.2:71295240-71295259 | MS.gene25743:CDS | 65.0% |
| !! | CTGCCCAACGTTGGTGGCAG+TGG | + | chr3.2:71293535-71293554 | MS.gene25743:intron | 65.0% |
| !! | GTGTCAGGTGCTGGCAGTGG+TGG | + | chr3.2:71293458-71293477 | MS.gene25743:intron | 65.0% |
| !! | TGGGTGTCAGGTGCTGGCAG+TGG | + | chr3.2:71293455-71293474 | MS.gene25743:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 71289671 | 71295874 | 71289671 | ID=MS.gene25743 |
| chr3.2 | mRNA | 71289671 | 71295874 | 71289671 | ID=MS.gene25743.t1;Parent=MS.gene25743 |
| chr3.2 | exon | 71289671 | 71289758 | 71289671 | ID=MS.gene25743.t1.exon1;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71289671 | 71289758 | 71289671 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| chr3.2 | exon | 71289886 | 71289968 | 71289886 | ID=MS.gene25743.t1.exon2;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71289886 | 71289968 | 71289886 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| chr3.2 | exon | 71290498 | 71290573 | 71290498 | ID=MS.gene25743.t1.exon3;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71290498 | 71290573 | 71290498 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| chr3.2 | exon | 71290704 | 71290771 | 71290704 | ID=MS.gene25743.t1.exon4;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71290704 | 71290771 | 71290704 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| chr3.2 | exon | 71292176 | 71292272 | 71292176 | ID=MS.gene25743.t1.exon5;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71292176 | 71292272 | 71292176 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| chr3.2 | exon | 71294006 | 71294127 | 71294006 | ID=MS.gene25743.t1.exon6;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71294006 | 71294127 | 71294006 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| chr3.2 | exon | 71294221 | 71294304 | 71294221 | ID=MS.gene25743.t1.exon7;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71294221 | 71294304 | 71294221 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| chr3.2 | exon | 71294730 | 71294876 | 71294730 | ID=MS.gene25743.t1.exon8;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71294730 | 71294876 | 71294730 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| chr3.2 | exon | 71294955 | 71295066 | 71294955 | ID=MS.gene25743.t1.exon9;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71294955 | 71295066 | 71294955 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| chr3.2 | exon | 71295160 | 71295279 | 71295160 | ID=MS.gene25743.t1.exon10;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71295160 | 71295279 | 71295160 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| chr3.2 | exon | 71295810 | 71295874 | 71295810 | ID=MS.gene25743.t1.exon11;Parent=MS.gene25743.t1 |
| chr3.2 | CDS | 71295810 | 71295874 | 71295810 | ID=cds.MS.gene25743.t1;Parent=MS.gene25743.t1 |
| Gene Sequence |
| Protein sequence |
