Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26355.t1 | XP_013456979.1 | 98.7 | 620 | 8 | 0 | 1 | 620 | 1 | 620 | 0.00E+00 | 1233.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26355.t1 | Q9SGN6 | 62.4 | 615 | 210 | 9 | 16 | 620 | 9 | 612 | 3.3e-216 | 752.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26355.t1 | A0A072UYS7 | 98.7 | 620 | 8 | 0 | 1 | 620 | 1 | 620 | 0.0e+00 | 1233.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015641 | MS.gene26355 | PPI |
| MS.gene26355 | MS.gene002651 | PPI |
| MS.gene004330 | MS.gene26355 | PPI |
| MS.gene26355 | MS.gene62676 | PPI |
| MS.gene058592 | MS.gene26355 | PPI |
| MS.gene26355 | MS.gene95833 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26355.t1 | MTR_4g088500 | 98.710 | 620 | 8 | 0 | 1 | 620 | 1 | 620 | 0.0 | 1262 |
| MS.gene26355.t1 | MTR_7g116350 | 70.607 | 626 | 44 | 9 | 2 | 620 | 316 | 808 | 0.0 | 798 |
| MS.gene26355.t1 | MTR_2g005730 | 52.658 | 602 | 261 | 9 | 21 | 614 | 11 | 596 | 0.0 | 614 |
| MS.gene26355.t1 | MTR_8g095090 | 51.410 | 603 | 272 | 9 | 20 | 617 | 8 | 594 | 0.0 | 573 |
| MS.gene26355.t1 | MTR_8g095090 | 52.000 | 525 | 235 | 7 | 96 | 617 | 1 | 511 | 5.15e-175 | 507 |
| MS.gene26355.t1 | MTR_8g097210 | 41.491 | 617 | 320 | 11 | 25 | 611 | 11 | 616 | 1.07e-159 | 472 |
| MS.gene26355.t1 | MTR_3g084930 | 40.492 | 610 | 335 | 9 | 23 | 611 | 15 | 617 | 3.57e-156 | 462 |
| MS.gene26355.t1 | MTR_8g095110 | 43.046 | 604 | 290 | 11 | 21 | 616 | 12 | 569 | 3.59e-153 | 453 |
| MS.gene26355.t1 | MTR_8g095150 | 40.735 | 599 | 292 | 14 | 21 | 613 | 12 | 553 | 2.10e-143 | 427 |
| MS.gene26355.t1 | MTR_8g097210 | 42.561 | 531 | 281 | 8 | 96 | 611 | 1 | 522 | 2.28e-143 | 426 |
| MS.gene26355.t1 | MTR_8g095140 | 40.164 | 610 | 304 | 12 | 21 | 613 | 12 | 577 | 7.42e-140 | 419 |
| MS.gene26355.t1 | MTR_8g105700 | 40.436 | 596 | 300 | 9 | 22 | 611 | 6 | 552 | 2.04e-136 | 410 |
| MS.gene26355.t1 | MTR_2g005730 | 52.381 | 399 | 173 | 6 | 22 | 414 | 12 | 399 | 1.15e-132 | 396 |
| MS.gene26355.t1 | MTR_2g017740 | 38.602 | 601 | 297 | 13 | 25 | 611 | 22 | 564 | 1.14e-127 | 387 |
| MS.gene26355.t1 | MTR_8g095130 | 41.734 | 496 | 250 | 10 | 127 | 619 | 12 | 471 | 3.83e-115 | 352 |
| MS.gene26355.t1 | MTR_4g027860 | 42.241 | 348 | 170 | 6 | 273 | 611 | 79 | 404 | 4.18e-79 | 256 |
| MS.gene26355.t1 | MTR_4g027880 | 38.854 | 157 | 90 | 2 | 22 | 174 | 11 | 165 | 2.12e-28 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26355.t1 | AT1G28380 | 62.439 | 615 | 210 | 9 | 16 | 620 | 9 | 612 | 0.0 | 765 |
| MS.gene26355.t1 | AT4G24290 | 51.639 | 610 | 265 | 10 | 21 | 619 | 10 | 600 | 0.0 | 601 |
| MS.gene26355.t1 | AT4G24290 | 51.639 | 610 | 265 | 10 | 21 | 619 | 10 | 600 | 0.0 | 601 |
| MS.gene26355.t1 | AT1G14780 | 38.961 | 616 | 342 | 13 | 23 | 611 | 10 | 618 | 1.58e-137 | 415 |
| MS.gene26355.t1 | AT1G29690 | 38.833 | 600 | 290 | 11 | 25 | 611 | 24 | 559 | 2.00e-133 | 402 |
| MS.gene26355.t1 | AT4G24290 | 49.853 | 339 | 147 | 7 | 21 | 348 | 10 | 336 | 3.20e-102 | 314 |
Find 148 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCGACAAAATTAAGCATTT+TGG | 0.150769 | 4.1:-21517434 | None:intergenic |
| TGTGATCTTCTGAAATTTCT+AGG | 0.199569 | 4.1:-21517021 | None:intergenic |
| CACGGTATTAACATAAAGTT+TGG | 0.221178 | 4.1:-21516677 | None:intergenic |
| GTCACTTCAGTTCACTCTTA+TGG | 0.231370 | 4.1:+21516651 | MS.gene26355:CDS |
| ACTAAGAGCCTTGCCTTTGA+TGG | 0.266531 | 4.1:+21515230 | MS.gene26355:CDS |
| TTCAGGTTCATTGAAAAGTA+TGG | 0.283487 | 4.1:+21515692 | MS.gene26355:intron |
| CAGAGGATCCACCAGGATAT+TGG | 0.288457 | 4.1:+21517479 | MS.gene26355:CDS |
| CAGCATCTTTCAGAGGTTCC+AGG | 0.308912 | 4.1:+21516995 | MS.gene26355:CDS |
| TTAATAGATAAGGGAACATT+AGG | 0.309328 | 4.1:-21514388 | None:intergenic |
| GGCTATATCAGGAAAATTAA+AGG | 0.311318 | 4.1:+21515880 | MS.gene26355:CDS |
| TGATGAAGTTCTTCTATTGC+AGG | 0.314788 | 4.1:-21516535 | None:intergenic |
| GTTGAGAGCCACTGGTTATA+AGG | 0.316965 | 4.1:-21516274 | None:intergenic |
| TATTCGACCATAAGTATAAA+AGG | 0.318647 | 4.1:+21516617 | MS.gene26355:CDS |
| TTCAATAAGCAGGTTGATTC+GGG | 0.318983 | 4.1:+21516902 | MS.gene26355:intron |
| GTCAATCCTGCGGCTATATC+AGG | 0.325598 | 4.1:+21515869 | MS.gene26355:CDS |
| CTGAATTCTGTCCCAGGAAA+TGG | 0.330279 | 4.1:+21516352 | MS.gene26355:CDS |
| TTGAACTACTATTGTCAATA+TGG | 0.331381 | 4.1:-21514327 | None:intergenic |
| AGATGTAGACTCATCCATTC+TGG | 0.349924 | 4.1:-21517146 | None:intergenic |
| TCACTTCAGTTCACTCTTAT+GGG | 0.350996 | 4.1:+21516652 | MS.gene26355:CDS |
| TCAACTTTAGATTGTTTCTC+AGG | 0.363374 | 4.1:-21517361 | None:intergenic |
| TCGTAGTAGCCTCGGCCATC+TGG | 0.365164 | 4.1:-21517064 | None:intergenic |
| CGGCCATCTGGTTCGTCAAT+AGG | 0.368985 | 4.1:-21517052 | None:intergenic |
| TTTCAATAAGCAGGTTGATT+CGG | 0.374923 | 4.1:+21516901 | MS.gene26355:intron |
| TTGGTTTGAGGTTAAGCTAA+TGG | 0.376476 | 4.1:+21517183 | MS.gene26355:CDS |
| TCGGGAAACCGGCCGGTAAC+AGG | 0.378523 | 4.1:+21516920 | MS.gene26355:CDS |
| AGAGGATCCACCAGGATATT+GGG | 0.391881 | 4.1:+21517480 | MS.gene26355:CDS |
| TGTCGAACATGCTATTGAAT+TGG | 0.395267 | 4.1:-21515175 | None:intergenic |
| TAATGTCATATCAATGTCTT+TGG | 0.396557 | 4.1:+21516312 | MS.gene26355:CDS |
| TGGTTTGAGGTTAAGCTAAT+GGG | 0.397784 | 4.1:+21517184 | MS.gene26355:CDS |
| GAATTCAGTAATGAAGTAAT+AGG | 0.399717 | 4.1:-21516337 | None:intergenic |
| TCAACCTCATCTAGAAAATC+AGG | 0.407263 | 4.1:+21517289 | MS.gene26355:CDS |
| TGTGACAAAGGCTTGGTTTG+AGG | 0.418183 | 4.1:+21517171 | MS.gene26355:CDS |
| AGCAGGTTGATTCGGGAAAC+CGG | 0.418321 | 4.1:+21516909 | MS.gene26355:intron |
| AAAGACATTGATATGACATT+AGG | 0.419683 | 4.1:-21516310 | None:intergenic |
| GATGCTGAAGATGGATTGAT+AGG | 0.420463 | 4.1:-21516979 | None:intergenic |
| ATGGTACACACGTAGTTGTT+GGG | 0.421463 | 4.1:+21515711 | MS.gene26355:CDS |
| CTTAGTGGAAGCTGCATCCC+TGG | 0.425444 | 4.1:-21515213 | None:intergenic |
| GGATGATCATACAAAGCTTA+GGG | 0.425872 | 4.1:+21516007 | MS.gene26355:intron |
| CAATATCCTGGTGGATCCTC+TGG | 0.428546 | 4.1:-21517478 | None:intergenic |
| CGTAGTTGTTGGGGTGAAGA+TGG | 0.431793 | 4.1:+21515721 | MS.gene26355:CDS |
| TTATCAGACTTAATAGATAA+GGG | 0.435251 | 4.1:-21514397 | None:intergenic |
| GCTTTCTCAGCTGCTAATTG+AGG | 0.435446 | 4.1:-21514232 | None:intergenic |
| ACTAATAGCTATGGAAATGC+AGG | 0.435774 | 4.1:+21514202 | MS.gene26355:CDS |
| CGACAATGGGCACCGATGTA+TGG | 0.437293 | 4.1:+21516580 | MS.gene26355:CDS |
| TTTATCAGACTTAATAGATA+AGG | 0.439387 | 4.1:-21514398 | None:intergenic |
| TTATCTATTAAGTCTGATAA+AGG | 0.439839 | 4.1:+21514400 | MS.gene26355:CDS |
| AGGATGATCATACAAAGCTT+AGG | 0.446411 | 4.1:+21516006 | MS.gene26355:intron |
| TTGGGAGCCCTTCTTGGCAC+AGG | 0.449347 | 4.1:-21517415 | None:intergenic |
| AACAAACCTCCGTCCCTTGT+TGG | 0.451722 | 4.1:+21516041 | MS.gene26355:CDS |
| AACAGACAACTATCATTGTC+GGG | 0.452760 | 4.1:+21515137 | MS.gene26355:CDS |
| AACAGGTATTCGTTTATACT+TGG | 0.457606 | 4.1:+21516937 | MS.gene26355:CDS |
| ACTTACTCAGCAAGAGCAGC+AGG | 0.458220 | 4.1:-21515344 | None:intergenic |
| ATCAAAGGCAAGGCTCTTAG+TGG | 0.462014 | 4.1:-21515228 | None:intergenic |
| GTTAATAATACTAATAGCTA+TGG | 0.462044 | 4.1:+21514193 | MS.gene26355:CDS |
| AACCTCCGTCCCTTGTTGGC+AGG | 0.463366 | 4.1:+21516045 | MS.gene26355:CDS |
| CTGGAGCTATTGTATTGTAC+AGG | 0.472485 | 4.1:-21517127 | None:intergenic |
| GTTTCAGTTGCCACGACAAT+GGG | 0.473101 | 4.1:+21516567 | MS.gene26355:CDS |
| ACGGTATTAACATAAAGTTT+GGG | 0.475299 | 4.1:-21516676 | None:intergenic |
| CTGATAAAGGTGATTGTACC+AGG | 0.476222 | 4.1:+21514413 | MS.gene26355:CDS |
| GGAGCCCTTCTTGGCACAGG+TGG | 0.479630 | 4.1:-21517412 | None:intergenic |
| CATCTATTGTGACAAAGGCT+TGG | 0.480707 | 4.1:+21517164 | MS.gene26355:CDS |
| GTGGTCCACCTGTGCCAAGA+AGG | 0.484031 | 4.1:+21517407 | MS.gene26355:CDS |
| TATAAACGAATACCTGTTAC+CGG | 0.485389 | 4.1:-21516932 | None:intergenic |
| GAGAAAGCTGTGAGTGTGAT+TGG | 0.485451 | 4.1:+21514247 | MS.gene26355:CDS |
| CCTCTGAAAGATGCTGAAGA+TGG | 0.486026 | 4.1:-21516988 | None:intergenic |
| CGAAAATTCGCAGATCAGAA+TGG | 0.487617 | 4.1:+21517257 | MS.gene26355:CDS |
| CCAGGATATTGGGTTGTCAC+TGG | 0.487824 | 4.1:+21517490 | MS.gene26355:CDS |
| TATGGTACACACGTAGTTGT+TGG | 0.495177 | 4.1:+21515710 | MS.gene26355:CDS |
| CAACAGACAACTATCATTGT+CGG | 0.500149 | 4.1:+21515136 | MS.gene26355:CDS |
| AGAGCCTTGCCTTTGATGGA+TGG | 0.511034 | 4.1:+21515234 | MS.gene26355:CDS |
| GGTATTCGTTTATACTTGGA+AGG | 0.511213 | 4.1:+21516941 | MS.gene26355:CDS |
| AGCAATTTCTGCAGTTCAGT+CGG | 0.511584 | 4.1:-21515794 | None:intergenic |
| GAAAATTCGCAGATCAGAAT+GGG | 0.514979 | 4.1:+21517258 | MS.gene26355:CDS |
| TAGTAAGCATTTCTGTTCGA+AGG | 0.519900 | 4.1:+21516230 | MS.gene26355:CDS |
| TTACAATTGGCCTGCCAACA+AGG | 0.520191 | 4.1:-21516055 | None:intergenic |
| GGTGCAAAGTTATGTGTAGA+AGG | 0.521969 | 4.1:+21517511 | MS.gene26355:CDS |
| TAGCTATGGAAATGCAGGGT+TGG | 0.526822 | 4.1:+21514207 | MS.gene26355:CDS |
| GACATTAGGAGACTGTGATA+TGG | 0.529982 | 4.1:-21516296 | None:intergenic |
| TCTCAGGTGAATGCAATCCT+TGG | 0.530122 | 4.1:-21517345 | None:intergenic |
| AGTTTCAGTTGCCACGACAA+TGG | 0.531590 | 4.1:+21516566 | MS.gene26355:CDS |
| GAAAACATGCTCCACTTCAC+TGG | 0.533461 | 4.1:-21517088 | None:intergenic |
| AGTAAGCATTTCTGTTCGAA+GGG | 0.537776 | 4.1:+21516231 | MS.gene26355:CDS |
| GACACAAAGGAAATGGTAAG+AGG | 0.538834 | 4.1:+21517454 | MS.gene26355:CDS |
| ATAAACTCGGCAATTTATCA+TGG | 0.539597 | 4.1:+21517385 | MS.gene26355:CDS |
| GATTCTCTGCTTGCAAGTCA+AGG | 0.541130 | 4.1:+21514299 | MS.gene26355:CDS |
| TAATAGATAAGGGAACATTA+GGG | 0.541232 | 4.1:-21514387 | None:intergenic |
| CCATCTTCAGCATCTTTCAG+AGG | 0.545066 | 4.1:+21516988 | MS.gene26355:CDS |
| TTGTCGGGAAAGATTCCATC+CGG | 0.552924 | 4.1:+21515152 | MS.gene26355:CDS |
| AGCATTTCTGTTCGAAGGGG+AGG | 0.555180 | 4.1:+21516235 | MS.gene26355:CDS |
| GGAAGAAGGAATTACCTTCA+CGG | 0.561197 | 4.1:-21516695 | None:intergenic |
| ACAATACAATAGCTCCAGAA+TGG | 0.564872 | 4.1:+21517132 | MS.gene26355:CDS |
| TGGTCCACCTGTGCCAAGAA+GGG | 0.573430 | 4.1:+21517408 | MS.gene26355:CDS |
| TCTGAAATTTCTAGGACACC+TGG | 0.574524 | 4.1:-21517013 | None:intergenic |
| GTAGTTGTTGGGGTGAAGAT+GGG | 0.574754 | 4.1:+21515722 | MS.gene26355:CDS |
| ATGCTATTGAATTGGCCGGA+TGG | 0.576725 | 4.1:-21515167 | None:intergenic |
| CCAGTGACAACCCAATATCC+TGG | 0.577834 | 4.1:-21517490 | None:intergenic |
| GTGATATGGTTGAGAGCCAC+TGG | 0.578254 | 4.1:-21516282 | None:intergenic |
| TACAATTGGCCTGCCAACAA+GGG | 0.578423 | 4.1:-21516054 | None:intergenic |
| AGGTGGCAGAATCTCAATCA+AGG | 0.582915 | 4.1:+21517531 | MS.gene26355:CDS |
| AACGAATACCTGTTACCGGC+CGG | 0.583865 | 4.1:-21516928 | None:intergenic |
| TACTTATGGTCGAATACAAG+AGG | 0.584243 | 4.1:-21516610 | None:intergenic |
| TGTTATGAACCATCCATCAA+AGG | 0.584689 | 4.1:-21515243 | None:intergenic |
| TCATTACTGAATTCTGTCCC+AGG | 0.588026 | 4.1:+21516346 | MS.gene26355:CDS |
| GAGGACATCGGATCGAAACC+TGG | 0.588872 | 4.1:-21514431 | None:intergenic |
| GGTTGATTCGGGAAACCGGC+CGG | 0.595912 | 4.1:+21516913 | MS.gene26355:intron |
| ATGAGTGCAAAGCTTAGCCA+AGG | 0.599460 | 4.1:+21517328 | MS.gene26355:CDS |
| GCTACTACGAACCAGTGAAG+TGG | 0.605145 | 4.1:+21517077 | MS.gene26355:CDS |
| GTCTACATCTATTGTGACAA+AGG | 0.606707 | 4.1:+21517159 | MS.gene26355:CDS |
| TACATCGGTGCCCATTGTCG+TGG | 0.607453 | 4.1:-21516577 | None:intergenic |
| ATTGGCCTGCCAACAAGGGA+CGG | 0.613832 | 4.1:-21516050 | None:intergenic |
| CTTAAGACTTGGATACTCAA+CGG | 0.619317 | 4.1:+21517225 | MS.gene26355:CDS |
| CTAATAGCTATGGAAATGCA+GGG | 0.619542 | 4.1:+21514203 | MS.gene26355:CDS |
| CAATGACCTGATTAAAAGTG+AGG | 0.619839 | 4.1:-21514450 | None:intergenic |
| TGAACCATCCATCAAAGGCA+AGG | 0.620613 | 4.1:-21515238 | None:intergenic |
| ATTCGCAGATCAGAATGGGA+TGG | 0.626214 | 4.1:+21517262 | MS.gene26355:CDS |
| AATTTCTGCAGTTCAGTCGG+CGG | 0.627237 | 4.1:-21515791 | None:intergenic |
| AGAGGTCCAGAGGATCCACC+AGG | 0.627751 | 4.1:+21517472 | MS.gene26355:CDS |
| CAAAGCTTAGGGGACTGCAC+AGG | 0.627915 | 4.1:+21516018 | MS.gene26355:CDS |
| TCACTGGTTCGTAGTAGCCT+CGG | 0.627996 | 4.1:-21517072 | None:intergenic |
| ACTTTATGTTAATACCGTGA+AGG | 0.630084 | 4.1:+21516681 | MS.gene26355:CDS |
| GCAGCAGGGTTCCACGAACA+AGG | 0.630710 | 4.1:-21515329 | None:intergenic |
| GGAAATGGTAAGAGGTCCAG+AGG | 0.631442 | 4.1:+21517462 | MS.gene26355:CDS |
| GATCCTATTGACGAACCAGA+TGG | 0.633830 | 4.1:+21517049 | MS.gene26355:CDS |
| ATTGACGAACCAGATGGCCG+AGG | 0.634066 | 4.1:+21517055 | MS.gene26355:CDS |
| GTTGTTGGGGTGAAGATGGG+AGG | 0.635084 | 4.1:+21515725 | MS.gene26355:CDS |
| ATAAGAGTGAACTGAAGTGA+CGG | 0.635680 | 4.1:-21516649 | None:intergenic |
| GAACATGCTATTGAATTGGC+CGG | 0.637602 | 4.1:-21515171 | None:intergenic |
| ATCTAAAGTTGACATAAACT+CGG | 0.638507 | 4.1:+21517372 | MS.gene26355:CDS |
| TTAGGGACAACAACACCAGA+AGG | 0.641365 | 4.1:-21514370 | None:intergenic |
| TGGTACACACGTAGTTGTTG+GGG | 0.641806 | 4.1:+21515712 | MS.gene26355:CDS |
| AACTCGGCAATTTATCATGG+TGG | 0.643726 | 4.1:+21517388 | MS.gene26355:CDS |
| ATCCACAGAAAACCTCTCGT+CGG | 0.645918 | 4.1:-21515828 | None:intergenic |
| TATGTCAACCTTATAACCAG+TGG | 0.646194 | 4.1:+21516266 | MS.gene26355:CDS |
| ACAATAGTAGTTCAAACACA+AGG | 0.647296 | 4.1:+21514335 | MS.gene26355:CDS |
| TTAAGCAATTAGCCGACGAG+AGG | 0.648867 | 4.1:+21515816 | MS.gene26355:CDS |
| GCTGTGAGTGTGATTGGTCA+AGG | 0.654752 | 4.1:+21514253 | MS.gene26355:CDS |
| GGCCTGCCAACAAGGGACGG+AGG | 0.659617 | 4.1:-21516047 | None:intergenic |
| GTAAGCATTTCTGTTCGAAG+GGG | 0.662446 | 4.1:+21516232 | MS.gene26355:CDS |
| CTGATTAAAAGTGAGGACAT+CGG | 0.670013 | 4.1:-21514443 | None:intergenic |
| AAGTTCTAATGTCAATCCTG+CGG | 0.679076 | 4.1:+21515859 | MS.gene26355:CDS |
| CTTACTCAGCAAGAGCAGCA+GGG | 0.684776 | 4.1:-21515343 | None:intergenic |
| GATGATCATACAAAGCTTAG+GGG | 0.687701 | 4.1:+21516008 | MS.gene26355:CDS |
| TAGTTGTCTGTTGAAATGCT+CGG | 0.693311 | 4.1:-21515126 | None:intergenic |
| GCTGAAGATGGATTGATAGG+TGG | 0.699756 | 4.1:-21516976 | None:intergenic |
| GTGACAACCCAATATCCTGG+TGG | 0.702984 | 4.1:-21517487 | None:intergenic |
| CAATAGTAGTTCAAACACAA+GGG | 0.705935 | 4.1:+21514336 | MS.gene26355:CDS |
| AGAGGCAGATCACCATACAT+CGG | 0.713318 | 4.1:-21516592 | None:intergenic |
| GCAAAGTTATGTGTAGAAGG+TGG | 0.744121 | 4.1:+21517514 | MS.gene26355:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAATAAAAAAGAAAGA+AGG | - | chr4.1:21516113-21516132 | None:intergenic | 15.0% |
| !! | AGAAGAAAAAAATAAGTATT+GGG | - | chr4.1:21516447-21516466 | None:intergenic | 15.0% |
| !! | ATGAAACTATTGAATATAAT+TGG | - | chr4.1:21514557-21514576 | None:intergenic | 15.0% |
| !!! | TAATAACTATTAAAGAGTAT+TGG | - | chr4.1:21516726-21516745 | None:intergenic | 15.0% |
| !!! | TATTATAAGAATTTCTTTTC+AGG | + | chr4.1:21516204-21516223 | MS.gene26355:intron | 15.0% |
| !! | AAAAAAAAAGGTAAATCAAC+AGG | - | chr4.1:21514977-21514996 | None:intergenic | 20.0% |
| !! | AAGAAATAAAGATCTAAGTA+AGG | - | chr4.1:21515599-21515618 | None:intergenic | 20.0% |
| !! | ACATATAAGTGATATGAAAA+GGG | + | chr4.1:21515030-21515049 | MS.gene26355:intron | 20.0% |
| !! | AGAACATGAAGATAAAAATA+TGG | + | chr4.1:21515928-21515947 | MS.gene26355:intron | 20.0% |
| !! | CAGAAGAAAAAAATAAGTAT+TGG | - | chr4.1:21516448-21516467 | None:intergenic | 20.0% |
| !! | GTTAATAATACTAATAGCTA+TGG | + | chr4.1:21514193-21514212 | MS.gene26355:CDS | 20.0% |
| !! | TAAAACTATAAGCATTCATT+TGG | + | chr4.1:21515484-21515503 | MS.gene26355:intron | 20.0% |
| !! | TGAAGATAAAAATATGGAAA+TGG | + | chr4.1:21515934-21515953 | MS.gene26355:intron | 20.0% |
| !! | TTATCAGACTTAATAGATAA+GGG | - | chr4.1:21514400-21514419 | None:intergenic | 20.0% |
| !! | TTATCTATTAAGTCTGATAA+AGG | + | chr4.1:21514400-21514419 | MS.gene26355:CDS | 20.0% |
| !! | TTCTTTGTTGAAATATATGT+TGG | + | chr4.1:21516476-21516495 | MS.gene26355:intron | 20.0% |
| !! | TTTATCAGACTTAATAGATA+AGG | - | chr4.1:21514401-21514420 | None:intergenic | 20.0% |
| !!! | AGTTTAAAACACTATTAACT+CGG | - | chr4.1:21515657-21515676 | None:intergenic | 20.0% |
| !!! | ATATGAAAAGGGAAATTTTA+GGG | + | chr4.1:21515041-21515060 | MS.gene26355:intron | 20.0% |
| !!! | ATTATATGATTTTCTAGTTG+CGG | + | chr4.1:21514732-21514751 | MS.gene26355:intron | 20.0% |
| !!! | CAATACTTATTTTTTTCTTC+TGG | + | chr4.1:21516446-21516465 | MS.gene26355:intron | 20.0% |
| !!! | TAATTTTCATTTATGGTAGA+TGG | + | chr4.1:21514996-21515015 | MS.gene26355:intron | 20.0% |
| !!! | TGAAATTTTTTGTTTGCATT+TGG | + | chr4.1:21514891-21514910 | MS.gene26355:intron | 20.0% |
| ! | AAAAATGCTAACATCATTCT+TGG | - | chr4.1:21516090-21516109 | None:intergenic | 25.0% |
| ! | AAAGACATTGATATGACATT+AGG | - | chr4.1:21516313-21516332 | None:intergenic | 25.0% |
| ! | AAATTCTCCTATATGTTGAT+TGG | + | chr4.1:21515630-21515649 | MS.gene26355:intron | 25.0% |
| ! | ACGGTATTAACATAAAGTTT+GGG | - | chr4.1:21516679-21516698 | None:intergenic | 25.0% |
| ! | ACTATTGATAAAACACAGTT+AGG | - | chr4.1:21514712-21514731 | None:intergenic | 25.0% |
| ! | ATATCTTTGATCATGTTTGT+AGG | + | chr4.1:21515986-21516005 | MS.gene26355:intron | 25.0% |
| ! | ATCAATCTTCAAAAGTCAAA+AGG | - | chr4.1:21514945-21514964 | None:intergenic | 25.0% |
| ! | CAAAAGTCAAAAGGTTAAAA+AGG | - | chr4.1:21514936-21514955 | None:intergenic | 25.0% |
| ! | CTAAATAAACATGATTCTTC+AGG | + | chr4.1:21515675-21515694 | MS.gene26355:intron | 25.0% |
| ! | CTATTGAATATAATTGGTCA+TGG | - | chr4.1:21514551-21514570 | None:intergenic | 25.0% |
| ! | GAATTCAGTAATGAAGTAAT+AGG | - | chr4.1:21516340-21516359 | None:intergenic | 25.0% |
| ! | GACATATAAGTGATATGAAA+AGG | + | chr4.1:21515029-21515048 | MS.gene26355:intron | 25.0% |
| ! | TAATAGATAAGGGAACATTA+GGG | - | chr4.1:21514390-21514409 | None:intergenic | 25.0% |
| ! | TAATGTCATATCAATGTCTT+TGG | + | chr4.1:21516312-21516331 | MS.gene26355:CDS | 25.0% |
| ! | TAGTGATCAGAATTCAATTA+TGG | - | chr4.1:21514862-21514881 | None:intergenic | 25.0% |
| ! | TATTCGACCATAAGTATAAA+AGG | + | chr4.1:21516617-21516636 | MS.gene26355:CDS | 25.0% |
| ! | TTAATAGATAAGGGAACATT+AGG | - | chr4.1:21514391-21514410 | None:intergenic | 25.0% |
| ! | TTCAATCAACTAGTTGAAAA+AGG | - | chr4.1:21514603-21514622 | None:intergenic | 25.0% |
| ! | TTGAACTACTATTGTCAATA+TGG | - | chr4.1:21514330-21514349 | None:intergenic | 25.0% |
| !! | ATAGAAAAGTTATTGACTAG+TGG | + | chr4.1:21514646-21514665 | MS.gene26355:intron | 25.0% |
| !! | ATCTAAAGTTGACATAAACT+CGG | + | chr4.1:21517372-21517391 | MS.gene26355:CDS | 25.0% |
| !! | GATATGAAAAGGGAAATTTT+AGG | + | chr4.1:21515040-21515059 | MS.gene26355:intron | 25.0% |
| !! | TATGAAAAGGGAAATTTTAG+GGG | + | chr4.1:21515042-21515061 | MS.gene26355:intron | 25.0% |
| !! | TCGACAAAATTAAGCATTTT+GGG | - | chr4.1:21517436-21517455 | None:intergenic | 25.0% |
| !!! | AAAAAATAAGTATTGGGCAA+AGG | - | chr4.1:21516441-21516460 | None:intergenic | 25.0% |
| !!! | AAAGTACTTTTCTTAAGACT+TGG | + | chr4.1:21517214-21517233 | MS.gene26355:CDS | 25.0% |
| !!! | AAATGGATTTTTAAGTCATG+CGG | + | chr4.1:21516369-21516388 | MS.gene26355:CDS | 25.0% |
| !!! | TATGGTAGATGGTTTTTTTT+TGG | + | chr4.1:21515007-21515026 | MS.gene26355:intron | 25.0% |
| !!! | TATTAAAGAGTATTGGAACT+TGG | - | chr4.1:21516719-21516738 | None:intergenic | 25.0% |
| AACAGGTATTCGTTTATACT+TGG | + | chr4.1:21516937-21516956 | MS.gene26355:CDS | 30.0% | |
| AAGAAATTGAAGCAGAAGTA+AGG | - | chr4.1:21514485-21514504 | None:intergenic | 30.0% | |
| ACAATAGTAGTTCAAACACA+AGG | + | chr4.1:21514335-21514354 | MS.gene26355:CDS | 30.0% | |
| ACTTGTATAGCAAGAATGTA+AGG | + | chr4.1:21516761-21516780 | MS.gene26355:intron | 30.0% | |
| ACTTTATGTTAATACCGTGA+AGG | + | chr4.1:21516681-21516700 | MS.gene26355:CDS | 30.0% | |
| ATAAACTCGGCAATTTATCA+TGG | + | chr4.1:21517385-21517404 | MS.gene26355:CDS | 30.0% | |
| ATTTCATGATGACTTAGAAG+AGG | - | chr4.1:21515388-21515407 | None:intergenic | 30.0% | |
| CAATAGTAGTTCAAACACAA+GGG | + | chr4.1:21514336-21514355 | MS.gene26355:CDS | 30.0% | |
| CACGGTATTAACATAAAGTT+TGG | - | chr4.1:21516680-21516699 | None:intergenic | 30.0% | |
| GACTTAAAAATCCATTTCCT+GGG | - | chr4.1:21516366-21516385 | None:intergenic | 30.0% | |
| GGCTATATCAGGAAAATTAA+AGG | + | chr4.1:21515880-21515899 | MS.gene26355:CDS | 30.0% | |
| TATAAACGAATACCTGTTAC+CGG | - | chr4.1:21516935-21516954 | None:intergenic | 30.0% | |
| TGACTTAAAAATCCATTTCC+TGG | - | chr4.1:21516367-21516386 | None:intergenic | 30.0% | |
| TGTTCGACATGAAAAAATGT+TGG | + | chr4.1:21515189-21515208 | MS.gene26355:CDS | 30.0% | |
| TTACATATTTGTGCTGAACA+TGG | - | chr4.1:21514627-21514646 | None:intergenic | 30.0% | |
| ! | AAATCCTGATTTTCTAGATG+AGG | - | chr4.1:21517296-21517315 | None:intergenic | 30.0% |
| ! | ACGCATTCCTTTTATACTTA+TGG | - | chr4.1:21516627-21516646 | None:intergenic | 30.0% |
| ! | AGTTGATATATTGAGCAAGT+TGG | + | chr4.1:21514679-21514698 | MS.gene26355:intron | 30.0% |
| ! | GTCGACAAAATTAAGCATTT+TGG | - | chr4.1:21517437-21517456 | None:intergenic | 30.0% |
| ! | GTTGAATGTTACTGCTATTT+AGG | - | chr4.1:21515541-21515560 | None:intergenic | 30.0% |
| ! | TCAACTTTAGATTGTTTCTC+AGG | - | chr4.1:21517364-21517383 | None:intergenic | 30.0% |
| ! | TTCAGGTTCATTGAAAAGTA+TGG | + | chr4.1:21515692-21515711 | MS.gene26355:intron | 30.0% |
| ! | TTGGAGTGACTTTTTACAAT+TGG | - | chr4.1:21516071-21516090 | None:intergenic | 30.0% |
| !! | GTTTTAGCAATTATAGAGCA+AGG | - | chr4.1:21515470-21515489 | None:intergenic | 30.0% |
| !! | TGTGATCTTCTGAAATTTCT+AGG | - | chr4.1:21517024-21517043 | None:intergenic | 30.0% |
| !! | TTTCAATAAGCAGGTTGATT+CGG | + | chr4.1:21516901-21516920 | MS.gene26355:intron | 30.0% |
| AACAGACAACTATCATTGTC+GGG | + | chr4.1:21515137-21515156 | MS.gene26355:CDS | 35.0% | |
| ACAATACAATAGCTCCAGAA+TGG | + | chr4.1:21517132-21517151 | MS.gene26355:CDS | 35.0% | |
| ACATGAAAAAATGTTGGTCC+AGG | + | chr4.1:21515195-21515214 | MS.gene26355:CDS | 35.0% | |
| ACTAATAGCTATGGAAATGC+AGG | + | chr4.1:21514202-21514221 | MS.gene26355:CDS | 35.0% | |
| AGGATGATCATACAAAGCTT+AGG | + | chr4.1:21516006-21516025 | MS.gene26355:intron | 35.0% | |
| AGTAAGCATTTCTGTTCGAA+GGG | + | chr4.1:21516231-21516250 | MS.gene26355:CDS | 35.0% | |
| ATAAGAGTGAACTGAAGTGA+CGG | - | chr4.1:21516652-21516671 | None:intergenic | 35.0% | |
| ATCAACCTGCTTATTGAAAC+AGG | - | chr4.1:21516900-21516919 | None:intergenic | 35.0% | |
| CAACAGACAACTATCATTGT+CGG | + | chr4.1:21515136-21515155 | MS.gene26355:CDS | 35.0% | |
| CAATGACCTGATTAAAAGTG+AGG | - | chr4.1:21514453-21514472 | None:intergenic | 35.0% | |
| CATGAAAAAATGTTGGTCCA+GGG | + | chr4.1:21515196-21515215 | MS.gene26355:CDS | 35.0% | |
| CTAATAGCTATGGAAATGCA+GGG | + | chr4.1:21514203-21514222 | MS.gene26355:CDS | 35.0% | |
| CTGATTAAAAGTGAGGACAT+CGG | - | chr4.1:21514446-21514465 | None:intergenic | 35.0% | |
| CTTAAGACTTGGATACTCAA+CGG | + | chr4.1:21517225-21517244 | MS.gene26355:CDS | 35.0% | |
| GAAAATTCGCAGATCAGAAT+GGG | + | chr4.1:21517258-21517277 | MS.gene26355:CDS | 35.0% | |
| GAAGAACACACGATTATTGT+AGG | + | chr4.1:21516842-21516861 | MS.gene26355:intron | 35.0% | |
| GATGATCATACAAAGCTTAG+GGG | + | chr4.1:21516008-21516027 | MS.gene26355:CDS | 35.0% | |
| GGATGATCATACAAAGCTTA+GGG | + | chr4.1:21516007-21516026 | MS.gene26355:intron | 35.0% | |
| GGTATTCGTTTATACTTGGA+AGG | + | chr4.1:21516941-21516960 | MS.gene26355:CDS | 35.0% | |
| GTCTACATCTATTGTGACAA+AGG | + | chr4.1:21517159-21517178 | MS.gene26355:CDS | 35.0% | |
| TACTTATGGTCGAATACAAG+AGG | - | chr4.1:21516613-21516632 | None:intergenic | 35.0% | |
| TAGTAAGCATTTCTGTTCGA+AGG | + | chr4.1:21516230-21516249 | MS.gene26355:CDS | 35.0% | |
| TAGTTGTCTGTTGAAATGCT+CGG | - | chr4.1:21515129-21515148 | None:intergenic | 35.0% | |
| TATGTCAACCTTATAACCAG+TGG | + | chr4.1:21516266-21516285 | MS.gene26355:CDS | 35.0% | |
| TCAACCTCATCTAGAAAATC+AGG | + | chr4.1:21517289-21517308 | MS.gene26355:CDS | 35.0% | |
| TCAACCTGCTTATTGAAACA+GGG | - | chr4.1:21516899-21516918 | None:intergenic | 35.0% | |
| TCACTTCAGTTCACTCTTAT+GGG | + | chr4.1:21516652-21516671 | MS.gene26355:CDS | 35.0% | |
| TCATTAGATACGATTCATCG+TGG | + | chr4.1:21514796-21514815 | MS.gene26355:intron | 35.0% | |
| TGATGAAGTTCTTCTATTGC+AGG | - | chr4.1:21516538-21516557 | None:intergenic | 35.0% | |
| TGTCGAACATGCTATTGAAT+TGG | - | chr4.1:21515178-21515197 | None:intergenic | 35.0% | |
| TGTTATGAACCATCCATCAA+AGG | - | chr4.1:21515246-21515265 | None:intergenic | 35.0% | |
| TTGTAGGAATTAGTTAGCAC+TGG | + | chr4.1:21516858-21516877 | MS.gene26355:intron | 35.0% | |
| ! | AAGTTCTAATGTCAATCCTG+CGG | + | chr4.1:21515859-21515878 | MS.gene26355:CDS | 35.0% |
| ! | GATTTTCTAGATGAGGTTGA+AGG | - | chr4.1:21517289-21517308 | None:intergenic | 35.0% |
| ! | GCTTAATTTTGTCGACACAA+AGG | + | chr4.1:21517441-21517460 | MS.gene26355:CDS | 35.0% |
| ! | TGGTTTGAGGTTAAGCTAAT+GGG | + | chr4.1:21517184-21517203 | MS.gene26355:CDS | 35.0% |
| ! | TTGGTTTGAGGTTAAGCTAA+TGG | + | chr4.1:21517183-21517202 | MS.gene26355:CDS | 35.0% |
| ! | TTTTGTCGACACAAAGGAAA+TGG | + | chr4.1:21517447-21517466 | MS.gene26355:CDS | 35.0% |
| !! | TTCAATAAGCAGGTTGATTC+GGG | + | chr4.1:21516902-21516921 | MS.gene26355:intron | 35.0% |
| AAAAAGACGTACCTTGTTCG+TGG | + | chr4.1:21515318-21515337 | MS.gene26355:CDS | 40.0% | |
| AACTCGGCAATTTATCATGG+TGG | + | chr4.1:21517388-21517407 | MS.gene26355:CDS | 40.0% | |
| AAGTTCGACTGTTCGAGTAT+AGG | - | chr4.1:21516185-21516204 | None:intergenic | 40.0% | |
| ACTCGGTCCAATCAACATAT+AGG | - | chr4.1:21515640-21515659 | None:intergenic | 40.0% | |
| AGAATAGATGCAAAGTGCAC+AGG | - | chr4.1:21516154-21516173 | None:intergenic | 40.0% | |
| AGATGTAGACTCATCCATTC+TGG | - | chr4.1:21517149-21517168 | None:intergenic | 40.0% | |
| AGCAATTTCTGCAGTTCAGT+CGG | - | chr4.1:21515797-21515816 | None:intergenic | 40.0% | |
| ATGGTACACACGTAGTTGTT+GGG | + | chr4.1:21515711-21515730 | MS.gene26355:CDS | 40.0% | |
| CAACACCAGAAGGAAAAACA+AGG | - | chr4.1:21514363-21514382 | None:intergenic | 40.0% | |
| CATCTATTGTGACAAAGGCT+TGG | + | chr4.1:21517164-21517183 | MS.gene26355:CDS | 40.0% | |
| CGAAAATTCGCAGATCAGAA+TGG | + | chr4.1:21517257-21517276 | MS.gene26355:CDS | 40.0% | |
| CTGATAAAGGTGATTGTACC+AGG | + | chr4.1:21514413-21514432 | MS.gene26355:CDS | 40.0% | |
| CTGGAGCTATTGTATTGTAC+AGG | - | chr4.1:21517130-21517149 | None:intergenic | 40.0% | |
| GAACATGCTATTGAATTGGC+CGG | - | chr4.1:21515174-21515193 | None:intergenic | 40.0% | |
| GACACAAAGGAAATGGTAAG+AGG | + | chr4.1:21517454-21517473 | MS.gene26355:CDS | 40.0% | |
| GACATTAGGAGACTGTGATA+TGG | - | chr4.1:21516299-21516318 | None:intergenic | 40.0% | |
| GCAAAGTTATGTGTAGAAGG+TGG | + | chr4.1:21517514-21517533 | MS.gene26355:CDS | 40.0% | |
| GGAAGAAGGAATTACCTTCA+CGG | - | chr4.1:21516698-21516717 | None:intergenic | 40.0% | |
| GGTGCAAAGTTATGTGTAGA+AGG | + | chr4.1:21517511-21517530 | MS.gene26355:CDS | 40.0% | |
| GTAAGCATTTCTGTTCGAAG+GGG | + | chr4.1:21516232-21516251 | MS.gene26355:CDS | 40.0% | |
| GTCACTTCAGTTCACTCTTA+TGG | + | chr4.1:21516651-21516670 | MS.gene26355:CDS | 40.0% | |
| TATGGTACACACGTAGTTGT+TGG | + | chr4.1:21515710-21515729 | MS.gene26355:CDS | 40.0% | |
| TCATTACTGAATTCTGTCCC+AGG | + | chr4.1:21516346-21516365 | MS.gene26355:CDS | 40.0% | |
| ! | AATTTTCCTGATATAGCCGC+AGG | - | chr4.1:21515878-21515897 | None:intergenic | 40.0% |
| ! | AGTTATTGACTAGTGGCAGA+TGG | + | chr4.1:21514653-21514672 | MS.gene26355:intron | 40.0% |
| ! | GTTATTGACTAGTGGCAGAT+GGG | + | chr4.1:21514654-21514673 | MS.gene26355:intron | 40.0% |
| ! | TTATTGACTAGTGGCAGATG+GGG | + | chr4.1:21514655-21514674 | MS.gene26355:intron | 40.0% |
| !! | AAGGGAAATTTTAGGGGTGA+TGG | + | chr4.1:21515048-21515067 | MS.gene26355:intron | 40.0% |
| !! | AGGGAAATTTTAGGGGTGAT+GGG | + | chr4.1:21515049-21515068 | MS.gene26355:intron | 40.0% |
| !! | CGATGTCCTCACTTTTAATC+AGG | + | chr4.1:21514444-21514463 | MS.gene26355:CDS | 40.0% |
| !! | GAGTATTGGAACTTGGAAGA+AGG | - | chr4.1:21516712-21516731 | None:intergenic | 40.0% |
| !! | GATGCTGAAGATGGATTGAT+AGG | - | chr4.1:21516982-21517001 | None:intergenic | 40.0% |
| !! | TCTGAAATTTCTAGGACACC+TGG | - | chr4.1:21517016-21517035 | None:intergenic | 40.0% |
| !!! | ATTTTAGGGGTGATGGGATA+TGG | + | chr4.1:21515055-21515074 | MS.gene26355:intron | 40.0% |
| AATTTCTGCAGTTCAGTCGG+CGG | - | chr4.1:21515794-21515813 | None:intergenic | 45.0% | |
| ACTAAGAGCCTTGCCTTTGA+TGG | + | chr4.1:21515230-21515249 | MS.gene26355:CDS | 45.0% | |
| AGAGGATCCACCAGGATATT+GGG | + | chr4.1:21517480-21517499 | MS.gene26355:CDS | 45.0% | |
| AGAGGCAGATCACCATACAT+CGG | - | chr4.1:21516595-21516614 | None:intergenic | 45.0% | |
| AGGTGGCAGAATCTCAATCA+AGG | + | chr4.1:21517531-21517550 | MS.gene26355:CDS | 45.0% | |
| AGTTTCAGTTGCCACGACAA+TGG | + | chr4.1:21516566-21516585 | MS.gene26355:CDS | 45.0% | |
| ATCAAAGGCAAGGCTCTTAG+TGG | - | chr4.1:21515231-21515250 | None:intergenic | 45.0% | |
| ATCCACAGAAAACCTCTCGT+CGG | - | chr4.1:21515831-21515850 | None:intergenic | 45.0% | |
| ATGAGTGCAAAGCTTAGCCA+AGG | + | chr4.1:21517328-21517347 | MS.gene26355:CDS | 45.0% | |
| ATGCTATTGAATTGGCCGGA+TGG | - | chr4.1:21515170-21515189 | None:intergenic | 45.0% | |
| ATTCGCAGATCAGAATGGGA+TGG | + | chr4.1:21517262-21517281 | MS.gene26355:CDS | 45.0% | |
| CAAAGGAAAACCAAAGTCGC+AGG | - | chr4.1:21516424-21516443 | None:intergenic | 45.0% | |
| CCATCTTCAGCATCTTTCAG+AGG | + | chr4.1:21516988-21517007 | MS.gene26355:CDS | 45.0% | |
| CTGAATTCTGTCCCAGGAAA+TGG | + | chr4.1:21516352-21516371 | MS.gene26355:CDS | 45.0% | |
| GAAAACATGCTCCACTTCAC+TGG | - | chr4.1:21517091-21517110 | None:intergenic | 45.0% | |
| GAGAAAGCTGTGAGTGTGAT+TGG | + | chr4.1:21514247-21514266 | MS.gene26355:CDS | 45.0% | |
| GATCCTATTGACGAACCAGA+TGG | + | chr4.1:21517049-21517068 | MS.gene26355:CDS | 45.0% | |
| GATTCTCTGCTTGCAAGTCA+AGG | + | chr4.1:21514299-21514318 | MS.gene26355:CDS | 45.0% | |
| GCTTTCTCAGCTGCTAATTG+AGG | - | chr4.1:21514235-21514254 | None:intergenic | 45.0% | |
| GTAGTTGTTGGGGTGAAGAT+GGG | + | chr4.1:21515722-21515741 | MS.gene26355:CDS | 45.0% | |
| GTTTCAGTTGCCACGACAAT+GGG | + | chr4.1:21516567-21516586 | MS.gene26355:CDS | 45.0% | |
| TAGCTATGGAAATGCAGGGT+TGG | + | chr4.1:21514207-21514226 | MS.gene26355:CDS | 45.0% | |
| TCGACCCTGTTTCAATAAGC+AGG | + | chr4.1:21516892-21516911 | MS.gene26355:intron | 45.0% | |
| TCTCAGGTGAATGCAATCCT+TGG | - | chr4.1:21517348-21517367 | None:intergenic | 45.0% | |
| TGAACCATCCATCAAAGGCA+AGG | - | chr4.1:21515241-21515260 | None:intergenic | 45.0% | |
| TGGTAATACCACGCACTAGA+TGG | - | chr4.1:21514842-21514861 | None:intergenic | 45.0% | |
| TGGTACACACGTAGTTGTTG+GGG | + | chr4.1:21515712-21515731 | MS.gene26355:CDS | 45.0% | |
| TGTTAGATCCATCTAGTGCG+TGG | + | chr4.1:21514831-21514850 | MS.gene26355:intron | 45.0% | |
| TTAAGCAATTAGCCGACGAG+AGG | + | chr4.1:21515816-21515835 | MS.gene26355:CDS | 45.0% | |
| TTAGGGACAACAACACCAGA+AGG | - | chr4.1:21514373-21514392 | None:intergenic | 45.0% | |
| TTGTCGGGAAAGATTCCATC+CGG | + | chr4.1:21515152-21515171 | MS.gene26355:CDS | 45.0% | |
| ! | CCTCTGAAAGATGCTGAAGA+TGG | - | chr4.1:21516991-21517010 | None:intergenic | 45.0% |
| ! | GTTGAGAGCCACTGGTTATA+AGG | - | chr4.1:21516277-21516296 | None:intergenic | 45.0% |
| ! | TACAATTGGCCTGCCAACAA+GGG | - | chr4.1:21516057-21516076 | None:intergenic | 45.0% |
| ! | TGTGACAAAGGCTTGGTTTG+AGG | + | chr4.1:21517171-21517190 | MS.gene26355:CDS | 45.0% |
| ! | TTACAATTGGCCTGCCAACA+AGG | - | chr4.1:21516058-21516077 | None:intergenic | 45.0% |
| !! | GCTGAAGATGGATTGATAGG+TGG | - | chr4.1:21516979-21516998 | None:intergenic | 45.0% |
| !!! | AGGGACCTTGTTTTTCCTTC+TGG | + | chr4.1:21514355-21514374 | MS.gene26355:CDS | 45.0% |
| !! | TAAATGAAAATTAAAAAAAA+AGG | - | chr4.1:21514989-21515008 | None:intergenic | 5.0% |
| !!! | TTTTTTTTAATTTTCATTTA+TGG | + | chr4.1:21514989-21515008 | MS.gene26355:intron | 5.0% |
| AACAAACCTCCGTCCCTTGT+TGG | + | chr4.1:21516041-21516060 | MS.gene26355:CDS | 50.0% | |
| AACGAATACCTGTTACCGGC+CGG | - | chr4.1:21516931-21516950 | None:intergenic | 50.0% | |
| ACTTACTCAGCAAGAGCAGC+AGG | - | chr4.1:21515347-21515366 | None:intergenic | 50.0% | |
| AGAGCCTTGCCTTTGATGGA+TGG | + | chr4.1:21515234-21515253 | MS.gene26355:CDS | 50.0% | |
| AGCATTTCTGTTCGAAGGGG+AGG | + | chr4.1:21516235-21516254 | MS.gene26355:CDS | 50.0% | |
| CAGAGGATCCACCAGGATAT+TGG | + | chr4.1:21517479-21517498 | MS.gene26355:CDS | 50.0% | |
| CAGCATCTTTCAGAGGTTCC+AGG | + | chr4.1:21516995-21517014 | MS.gene26355:CDS | 50.0% | |
| CCAGTGACAACCCAATATCC+TGG | - | chr4.1:21517493-21517512 | None:intergenic | 50.0% | |
| CGTAGTTGTTGGGGTGAAGA+TGG | + | chr4.1:21515721-21515740 | MS.gene26355:CDS | 50.0% | |
| CTTACTCAGCAAGAGCAGCA+GGG | - | chr4.1:21515346-21515365 | None:intergenic | 50.0% | |
| GCTACTACGAACCAGTGAAG+TGG | + | chr4.1:21517077-21517096 | MS.gene26355:CDS | 50.0% | |
| GGAAATGGTAAGAGGTCCAG+AGG | + | chr4.1:21517462-21517481 | MS.gene26355:CDS | 50.0% | |
| GTCAATCCTGCGGCTATATC+AGG | + | chr4.1:21515869-21515888 | MS.gene26355:CDS | 50.0% | |
| GTGACAACCCAATATCCTGG+TGG | - | chr4.1:21517490-21517509 | None:intergenic | 50.0% | |
| GTGATATGGTTGAGAGCCAC+TGG | - | chr4.1:21516285-21516304 | None:intergenic | 50.0% | |
| TGAGTAGACACCTGCGACTT+TGG | + | chr4.1:21516411-21516430 | MS.gene26355:intron | 50.0% | |
| ! | CAATATCCTGGTGGATCCTC+TGG | - | chr4.1:21517481-21517500 | None:intergenic | 50.0% |
| ! | CCAGGATATTGGGTTGTCAC+TGG | + | chr4.1:21517490-21517509 | MS.gene26355:CDS | 50.0% |
| ! | GCTGTGAGTGTGATTGGTCA+AGG | + | chr4.1:21514253-21514272 | MS.gene26355:CDS | 50.0% |
| !! | AGCAGGTTGATTCGGGAAAC+CGG | + | chr4.1:21516909-21516928 | MS.gene26355:intron | 50.0% |
| !! | AGCATTTTGGGAGCCCTTCT+TGG | - | chr4.1:21517424-21517443 | None:intergenic | 50.0% |
| !! | TCACTGGTTCGTAGTAGCCT+CGG | - | chr4.1:21517075-21517094 | None:intergenic | 50.0% |
| ATTGACGAACCAGATGGCCG+AGG | + | chr4.1:21517055-21517074 | MS.gene26355:CDS | 55.0% | |
| CAAAGCTTAGGGGACTGCAC+AGG | + | chr4.1:21516018-21516037 | MS.gene26355:CDS | 55.0% | |
| CTTAGTGGAAGCTGCATCCC+TGG | - | chr4.1:21515216-21515235 | None:intergenic | 55.0% | |
| GAGGACATCGGATCGAAACC+TGG | - | chr4.1:21514434-21514453 | None:intergenic | 55.0% | |
| GTTGTTGGGGTGAAGATGGG+AGG | + | chr4.1:21515725-21515744 | MS.gene26355:CDS | 55.0% | |
| TGGTCCACCTGTGCCAAGAA+GGG | + | chr4.1:21517408-21517427 | MS.gene26355:CDS | 55.0% | |
| ! | AGCCGACGAGAGGTTTTCTG+TGG | + | chr4.1:21515826-21515845 | MS.gene26355:CDS | 55.0% |
| ! | ATTGGCCTGCCAACAAGGGA+CGG | - | chr4.1:21516053-21516072 | None:intergenic | 55.0% |
| ! | CGGCCATCTGGTTCGTCAAT+AGG | - | chr4.1:21517055-21517074 | None:intergenic | 55.0% |
| ! | TACATCGGTGCCCATTGTCG+TGG | - | chr4.1:21516580-21516599 | None:intergenic | 55.0% |
| !! | CGACAATGGGCACCGATGTA+TGG | + | chr4.1:21516580-21516599 | MS.gene26355:CDS | 55.0% |
| AACCTCCGTCCCTTGTTGGC+AGG | + | chr4.1:21516045-21516064 | MS.gene26355:CDS | 60.0% | |
| AGAGGTCCAGAGGATCCACC+AGG | + | chr4.1:21517472-21517491 | MS.gene26355:CDS | 60.0% | |
| GCAGCAGGGTTCCACGAACA+AGG | - | chr4.1:21515332-21515351 | None:intergenic | 60.0% | |
| GTGGTCCACCTGTGCCAAGA+AGG | + | chr4.1:21517407-21517426 | MS.gene26355:CDS | 60.0% | |
| TCGTAGTAGCCTCGGCCATC+TGG | - | chr4.1:21517067-21517086 | None:intergenic | 60.0% | |
| TTGGGAGCCCTTCTTGGCAC+AGG | - | chr4.1:21517418-21517437 | None:intergenic | 60.0% | |
| !! | GGTTGATTCGGGAAACCGGC+CGG | + | chr4.1:21516913-21516932 | MS.gene26355:intron | 60.0% |
| GGAGCCCTTCTTGGCACAGG+TGG | - | chr4.1:21517415-21517434 | None:intergenic | 65.0% | |
| TCGGGAAACCGGCCGGTAAC+AGG | + | chr4.1:21516920-21516939 | MS.gene26355:CDS | 65.0% | |
| GGCCTGCCAACAAGGGACGG+AGG | - | chr4.1:21516050-21516069 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 21514181 | 21517600 | 21514181 | ID=MS.gene26355 |
| chr4.1 | mRNA | 21514181 | 21517600 | 21514181 | ID=MS.gene26355.t1;Parent=MS.gene26355 |
| chr4.1 | exon | 21514181 | 21514465 | 21514181 | ID=MS.gene26355.t1.exon1;Parent=MS.gene26355.t1 |
| chr4.1 | CDS | 21514181 | 21514465 | 21514181 | ID=cds.MS.gene26355.t1;Parent=MS.gene26355.t1 |
| chr4.1 | exon | 21515122 | 21515360 | 21515122 | ID=MS.gene26355.t1.exon2;Parent=MS.gene26355.t1 |
| chr4.1 | CDS | 21515122 | 21515360 | 21515122 | ID=cds.MS.gene26355.t1;Parent=MS.gene26355.t1 |
| chr4.1 | exon | 21515697 | 21515901 | 21515697 | ID=MS.gene26355.t1.exon3;Parent=MS.gene26355.t1 |
| chr4.1 | CDS | 21515697 | 21515901 | 21515697 | ID=cds.MS.gene26355.t1;Parent=MS.gene26355.t1 |
| chr4.1 | exon | 21516008 | 21516097 | 21516008 | ID=MS.gene26355.t1.exon4;Parent=MS.gene26355.t1 |
| chr4.1 | CDS | 21516008 | 21516097 | 21516008 | ID=cds.MS.gene26355.t1;Parent=MS.gene26355.t1 |
| chr4.1 | exon | 21516226 | 21516409 | 21516226 | ID=MS.gene26355.t1.exon5;Parent=MS.gene26355.t1 |
| chr4.1 | CDS | 21516226 | 21516409 | 21516226 | ID=cds.MS.gene26355.t1;Parent=MS.gene26355.t1 |
| chr4.1 | exon | 21516530 | 21516702 | 21516530 | ID=MS.gene26355.t1.exon6;Parent=MS.gene26355.t1 |
| chr4.1 | CDS | 21516530 | 21516702 | 21516530 | ID=cds.MS.gene26355.t1;Parent=MS.gene26355.t1 |
| chr4.1 | exon | 21516914 | 21517600 | 21516914 | ID=MS.gene26355.t1.exon7;Parent=MS.gene26355.t1 |
| chr4.1 | CDS | 21516914 | 21517600 | 21516914 | ID=cds.MS.gene26355.t1;Parent=MS.gene26355.t1 |
| Gene Sequence |
| Protein sequence |
