Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26901.t1 | XP_003592402.1 | 95.4 | 414 | 9 | 3 | 1 | 413 | 1 | 405 | 7.50E-216 | 759.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26901.t1 | G7ID63 | 95.4 | 414 | 9 | 3 | 1 | 413 | 1 | 405 | 5.4e-216 | 759.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050707 | MS.gene26901 | 0.837733 | 4.37E-57 | -1.69E-46 |
| MS.gene054850 | MS.gene26901 | 0.842965 | 1.87E-58 | -1.69E-46 |
| MS.gene058128 | MS.gene26901 | 0.804949 | 1.69E-49 | -1.69E-46 |
| MS.gene058853 | MS.gene26901 | 0.800532 | 1.38E-48 | -1.69E-46 |
| MS.gene059905 | MS.gene26901 | 0.809175 | 2.15E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26901.t1 | MTR_1g104540 | 95.411 | 414 | 9 | 3 | 1 | 413 | 1 | 405 | 0.0 | 800 |
| MS.gene26901.t1 | MTR_3g098530 | 30.198 | 202 | 127 | 4 | 12 | 208 | 44 | 236 | 1.07e-21 | 94.4 |
| MS.gene26901.t1 | MTR_1g022185 | 29.798 | 198 | 132 | 4 | 9 | 203 | 13 | 206 | 1.98e-20 | 91.3 |
| MS.gene26901.t1 | MTR_8g096180 | 27.778 | 198 | 137 | 3 | 12 | 208 | 24 | 216 | 7.26e-20 | 89.0 |
| MS.gene26901.t1 | MTR_8g096170 | 26.471 | 204 | 144 | 3 | 6 | 208 | 21 | 219 | 3.80e-19 | 86.7 |
| MS.gene26901.t1 | MTR_3g074050 | 29.353 | 201 | 134 | 3 | 8 | 207 | 21 | 214 | 8.09e-19 | 87.0 |
| MS.gene26901.t1 | MTR_3g074050 | 28.856 | 201 | 136 | 3 | 8 | 207 | 21 | 215 | 8.27e-19 | 87.0 |
| MS.gene26901.t1 | MTR_5g062310 | 27.586 | 203 | 138 | 4 | 7 | 207 | 17 | 212 | 2.48e-18 | 85.9 |
| MS.gene26901.t1 | MTR_7g087500 | 29.570 | 186 | 127 | 2 | 19 | 203 | 24 | 206 | 1.43e-17 | 83.6 |
| MS.gene26901.t1 | MTR_8g096180 | 26.190 | 210 | 139 | 4 | 10 | 208 | 22 | 226 | 9.26e-17 | 80.1 |
| MS.gene26901.t1 | MTR_8g077700 | 27.273 | 198 | 125 | 5 | 19 | 207 | 23 | 210 | 1.00e-14 | 74.7 |
| MS.gene26901.t1 | MTR_8g077700 | 27.273 | 198 | 125 | 5 | 19 | 207 | 51 | 238 | 1.43e-14 | 74.7 |
| MS.gene26901.t1 | MTR_4g105460 | 25.478 | 157 | 115 | 2 | 45 | 200 | 77 | 232 | 3.73e-11 | 63.5 |
| MS.gene26901.t1 | MTR_4g105450 | 25.641 | 156 | 114 | 2 | 42 | 196 | 72 | 226 | 5.01e-11 | 63.2 |
| MS.gene26901.t1 | MTR_1g022480 | 27.461 | 193 | 110 | 5 | 39 | 207 | 26 | 212 | 6.87e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26901.t1 | AT1G05370 | 63.256 | 430 | 128 | 11 | 1 | 413 | 1 | 417 | 1.01e-177 | 502 |
| MS.gene26901.t1 | AT3G22410 | 60.714 | 420 | 138 | 13 | 1 | 413 | 1 | 400 | 7.94e-164 | 466 |
| MS.gene26901.t1 | AT4G08690 | 31.795 | 195 | 126 | 3 | 10 | 203 | 17 | 205 | 1.96e-22 | 97.1 |
| MS.gene26901.t1 | AT4G08690 | 31.795 | 195 | 126 | 3 | 10 | 203 | 17 | 205 | 1.96e-22 | 97.1 |
| MS.gene26901.t1 | AT4G08690 | 31.795 | 195 | 126 | 3 | 10 | 203 | 17 | 205 | 1.96e-22 | 97.1 |
| MS.gene26901.t1 | AT1G75170 | 33.005 | 203 | 128 | 5 | 9 | 207 | 13 | 211 | 2.08e-22 | 97.1 |
| MS.gene26901.t1 | AT1G75170 | 33.005 | 203 | 128 | 5 | 9 | 207 | 13 | 211 | 2.08e-22 | 97.1 |
| MS.gene26901.t1 | AT1G22180 | 31.492 | 181 | 120 | 2 | 28 | 207 | 35 | 212 | 2.58e-22 | 97.1 |
| MS.gene26901.t1 | AT1G22180 | 31.492 | 181 | 120 | 2 | 28 | 207 | 35 | 212 | 2.58e-22 | 97.1 |
| MS.gene26901.t1 | AT1G01630 | 25.962 | 208 | 147 | 4 | 3 | 208 | 17 | 219 | 2.60e-17 | 81.6 |
| MS.gene26901.t1 | AT4G36640 | 29.208 | 202 | 138 | 4 | 8 | 207 | 10 | 208 | 2.87e-16 | 79.3 |
| MS.gene26901.t1 | AT4G36640 | 29.208 | 202 | 138 | 4 | 8 | 207 | 10 | 208 | 2.87e-16 | 79.3 |
| MS.gene26901.t1 | AT1G22180 | 28.859 | 149 | 102 | 2 | 60 | 207 | 2 | 147 | 4.90e-13 | 68.9 |
| MS.gene26901.t1 | AT1G22180 | 28.859 | 149 | 102 | 2 | 60 | 207 | 2 | 147 | 4.90e-13 | 68.9 |
| MS.gene26901.t1 | AT5G63060 | 28.025 | 157 | 111 | 2 | 45 | 200 | 78 | 233 | 2.72e-12 | 67.0 |
| MS.gene26901.t1 | AT5G63060 | 28.025 | 157 | 111 | 2 | 45 | 200 | 43 | 198 | 4.99e-12 | 65.9 |
Find 106 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTAAGAGCTTGTCTTTCA+TGG | 0.260163 | 1.4:+80433190 | MS.gene26901:CDS |
| TAGCAGTTTCCTTGTCTTTG+AGG | 0.282802 | 1.4:-80432953 | None:intergenic |
| AAGGTTCTTCACTCGTTTAT+TGG | 0.316228 | 1.4:+80434009 | MS.gene26901:intron |
| CCATTGATGGTTCGAAATCT+AGG | 0.348472 | 1.4:-80436004 | None:intergenic |
| AGGGATGATGCTGCTGGGGA+GGG | 0.352053 | 1.4:-80436227 | None:intergenic |
| TGCTGCTGGGGAGGGGCTAG+TGG | 0.364455 | 1.4:-80436219 | None:intergenic |
| TGGAGAGAAAGCATTGTTAC+TGG | 0.366079 | 1.4:+80433210 | MS.gene26901:CDS |
| TGATGAATCCAGACCTGTTT+TGG | 0.373995 | 1.4:+80433678 | MS.gene26901:CDS |
| ATAATAAAACTTACCAAAAC+AGG | 0.377861 | 1.4:-80433691 | None:intergenic |
| CGTATGATGAAATGGTTTAT+AGG | 0.382044 | 1.4:+80436498 | MS.gene26901:CDS |
| TGCTGGCTGGTGGGCCCAGT+GGG | 0.383306 | 1.4:-80436301 | None:intergenic |
| CGTATGTGAAATTCTATAGA+AGG | 0.391586 | 1.4:+80436474 | MS.gene26901:CDS |
| CCCAGTGGGTTACGTGCTAT+TGG | 0.399472 | 1.4:-80436287 | None:intergenic |
| CTCTGCGGCAGTGGTGTTGA+AGG | 0.404669 | 1.4:-80436338 | None:intergenic |
| AAGTCGTTGTAGTCCATTGA+TGG | 0.407526 | 1.4:-80436017 | None:intergenic |
| AACACCTCTTACTGTCAAAC+AGG | 0.413229 | 1.4:+80433010 | MS.gene26901:CDS |
| ATCTGAAGGGTTGGCTTATG+TGG | 0.418745 | 1.4:+80433645 | MS.gene26901:CDS |
| AACCCCTTCCTGCTGGCTGG+TGG | 0.418815 | 1.4:-80436311 | None:intergenic |
| TGGATTTATGAACTTGTTGT+TGG | 0.425772 | 1.4:+80434689 | MS.gene26901:CDS |
| ATCTGAGGGATGAGGCTCTT+GGG | 0.427015 | 1.4:-80436049 | None:intergenic |
| AAGGGATGATGCTGCTGGGG+AGG | 0.428497 | 1.4:-80436228 | None:intergenic |
| GCTGCTGGGGAGGGGCTAGT+GGG | 0.439448 | 1.4:-80436218 | None:intergenic |
| AACAACCCCTTCCTGCTGGC+TGG | 0.440949 | 1.4:-80436314 | None:intergenic |
| ACCCCTTCCTGCTGGCTGGT+GGG | 0.442147 | 1.4:-80436310 | None:intergenic |
| GGCCCACCAGCCAGCAGGAA+GGG | 0.443514 | 1.4:+80436308 | MS.gene26901:CDS |
| GGGGCTAGTGGGTCCTACCT+TGG | 0.446906 | 1.4:-80436207 | None:intergenic |
| AGCGAGCGTTGAGTGGTGTA+AGG | 0.447735 | 1.4:-80436247 | None:intergenic |
| TAGAAGGGCGTATGATGAAA+TGG | 0.454431 | 1.4:+80436490 | MS.gene26901:CDS |
| CCTAGATTTCGAACCATCAA+TGG | 0.454461 | 1.4:+80436004 | MS.gene26901:CDS |
| CTAAAATCAACGGCCAAGAT+TGG | 0.455841 | 1.4:+80436086 | MS.gene26901:CDS |
| GCTAGTGGGTCCTACCTTGG+AGG | 0.458451 | 1.4:-80436204 | None:intergenic |
| GGATGAGCATGAACCAATCT+TGG | 0.477387 | 1.4:-80436099 | None:intergenic |
| GCTGTCACTCTCTGCGGCAG+TGG | 0.479497 | 1.4:-80436347 | None:intergenic |
| ACCAATAGCACGTAACCCAC+TGG | 0.480055 | 1.4:+80436286 | MS.gene26901:CDS |
| GAAGGGTTGGCTTATGTGGC+TGG | 0.480517 | 1.4:+80433649 | MS.gene26901:CDS |
| AAAACTTACCAAAACAGGTC+TGG | 0.482409 | 1.4:-80433686 | None:intergenic |
| GGATTTATGAACTTGTTGTT+GGG | 0.483181 | 1.4:+80434690 | MS.gene26901:CDS |
| AATCTGAGGGATGAGGCTCT+TGG | 0.483672 | 1.4:-80436050 | None:intergenic |
| ATTGTGGGTGAGTACTATCC+AGG | 0.486719 | 1.4:+80434723 | MS.gene26901:CDS |
| CACTGGGCCCACCAGCCAGC+AGG | 0.490128 | 1.4:+80436303 | MS.gene26901:CDS |
| AATGCTTTGCTTAACCGTCC+TGG | 0.493604 | 1.4:-80434741 | None:intergenic |
| TTGGGAGCATTGAAAATTGT+GGG | 0.494434 | 1.4:+80434708 | MS.gene26901:CDS |
| CTGCTGGCTGGTGGGCCCAG+TGG | 0.496285 | 1.4:-80436302 | None:intergenic |
| TGTTGTCTCCTCCTAGGCTT+AGG | 0.500621 | 1.4:-80436175 | None:intergenic |
| GGTGTAAGGGATGATGCTGC+TGG | 0.502520 | 1.4:-80436233 | None:intergenic |
| GGCGTCGTTTCTTCAATCTC+CGG | 0.503298 | 1.4:+80436388 | MS.gene26901:CDS |
| GTTGGGAGCATTGAAAATTG+TGG | 0.506561 | 1.4:+80434707 | MS.gene26901:CDS |
| TTCTCAGCTGAATTATCTGA+AGG | 0.510130 | 1.4:+80433631 | MS.gene26901:CDS |
| ATTGGCTTTCACAATGGAAG+TGG | 0.511205 | 1.4:+80434027 | MS.gene26901:CDS |
| GTAACTATGCTTGTGTGAAA+CGG | 0.512111 | 1.4:+80433124 | MS.gene26901:CDS |
| TGTACCTGTTTGACAGTAAG+AGG | 0.513987 | 1.4:-80433014 | None:intergenic |
| AGCTGAATTATCTGAAGGGT+TGG | 0.514458 | 1.4:+80433636 | MS.gene26901:CDS |
| AGGGAACAACCCCTTCCTGC+TGG | 0.515575 | 1.4:-80436318 | None:intergenic |
| GGGATGATGCTGCTGGGGAG+GGG | 0.519871 | 1.4:-80436226 | None:intergenic |
| GCCCACCAGCCAGCAGGAAG+GGG | 0.520539 | 1.4:+80436309 | MS.gene26901:CDS |
| TGATTAGAAACGCTGAGAAA+CGG | 0.520943 | 1.4:-80436597 | None:intergenic |
| CATTGATGGTTCGAAATCTA+GGG | 0.533344 | 1.4:-80436003 | None:intergenic |
| GATAATGTGAAGGTGGAAAG+AGG | 0.533969 | 1.4:+80436434 | MS.gene26901:CDS |
| ATGACGTGTTGTCTCCTCCT+AGG | 0.536999 | 1.4:-80436181 | None:intergenic |
| GTGTAAGGGATGATGCTGCT+GGG | 0.543625 | 1.4:-80436232 | None:intergenic |
| TGTAAGGGATGATGCTGCTG+GGG | 0.547217 | 1.4:-80436231 | None:intergenic |
| CCTCCTAGGCTTAGGTACCA+TGG | 0.550873 | 1.4:-80436167 | None:intergenic |
| GAGGGATGAGGCTCTTGGGT+AGG | 0.552830 | 1.4:-80436045 | None:intergenic |
| GGGTTGATGGGTCGAATCTG+AGG | 0.558790 | 1.4:-80436064 | None:intergenic |
| GGGCCCACCAGCCAGCAGGA+AGG | 0.561599 | 1.4:+80436307 | MS.gene26901:CDS |
| AGAGAGTGACAGCTCCTCAC+CGG | 0.572658 | 1.4:+80436357 | MS.gene26901:CDS |
| CAAAGACAAGGAAACTGCTA+AGG | 0.578054 | 1.4:+80432956 | MS.gene26901:CDS |
| AACTCGACTCACTCAAACCA+TGG | 0.579927 | 1.4:+80436150 | MS.gene26901:CDS |
| CCAATAGCACGTAACCCACT+GGG | 0.581169 | 1.4:+80436287 | MS.gene26901:CDS |
| AAACGGTTTCTGAAAGTGAA+AGG | 0.582881 | 1.4:+80433141 | MS.gene26901:CDS |
| GAAACGACGCCGTTGTACTC+CGG | 0.585788 | 1.4:-80436376 | None:intergenic |
| TAGAGACTAATCCACCAAGT+GGG | 0.588815 | 1.4:-80436535 | None:intergenic |
| TCGTTTATTGGCTTTCACAA+TGG | 0.591579 | 1.4:+80434021 | MS.gene26901:CDS |
| TCTGATAGTCTTGTTTCATG+CGG | 0.591599 | 1.4:-80433859 | None:intergenic |
| TCTGCGGCAGTGGTGTTGAA+GGG | 0.591949 | 1.4:-80436337 | None:intergenic |
| GAGAGTGAGCGAGCGTTGAG+TGG | 0.592294 | 1.4:-80436254 | None:intergenic |
| CCATGGTACCTAAGCCTAGG+AGG | 0.598899 | 1.4:+80436167 | MS.gene26901:CDS |
| ACGTGCTATTGGTGAAGCGA+AGG | 0.605710 | 1.4:-80436276 | None:intergenic |
| AGAGACTAATCCACCAAGTG+GGG | 0.606305 | 1.4:-80436534 | None:intergenic |
| CCCATCAACCCTAAAATCAA+CGG | 0.608077 | 1.4:+80436076 | MS.gene26901:CDS |
| AAACCATGGTACCTAAGCCT+AGG | 0.608161 | 1.4:+80436164 | MS.gene26901:CDS |
| TCTCAGCTGAATTATCTGAA+GGG | 0.608948 | 1.4:+80433632 | MS.gene26901:CDS |
| TCACATTATCCCTATCCCGC+CGG | 0.611014 | 1.4:-80436421 | None:intergenic |
| GGTTGATGGGTCGAATCTGA+GGG | 0.612135 | 1.4:-80436063 | None:intergenic |
| ATGGTTTGAGTGAGTCGAGT+TGG | 0.618278 | 1.4:-80436148 | None:intergenic |
| GGATAGGGATAATGTGAAGG+TGG | 0.622484 | 1.4:+80436427 | MS.gene26901:CDS |
| AGACAACACGTCATCCTCCA+AGG | 0.622914 | 1.4:+80436190 | MS.gene26901:CDS |
| CATGTTGATAGCTCAACGAA+TGG | 0.624312 | 1.4:-80435963 | None:intergenic |
| GTATGTGAAATTCTATAGAA+GGG | 0.624349 | 1.4:+80436475 | MS.gene26901:CDS |
| TGGGTCGAATCTGAGGGATG+AGG | 0.634099 | 1.4:-80436057 | None:intergenic |
| AAACGGAAAGGTGAGTGTGA+CGG | 0.648731 | 1.4:-80436580 | None:intergenic |
| GCGGGATAGGGATAATGTGA+AGG | 0.650440 | 1.4:+80436424 | MS.gene26901:CDS |
| ACTTGAACTCCTCAAAGACA+AGG | 0.655023 | 1.4:+80432944 | MS.gene26901:CDS |
| GTGTGACGGCGTCTAATATG+AGG | 0.655901 | 1.4:-80436566 | None:intergenic |
| AGCTCCTCACCGGAGTACAA+CGG | 0.657216 | 1.4:+80436367 | MS.gene26901:CDS |
| AGAAACGCTGAGAAACGGAA+AGG | 0.658877 | 1.4:-80436592 | None:intergenic |
| GCGAGCGTTGAGTGGTGTAA+GGG | 0.663009 | 1.4:-80436246 | None:intergenic |
| AACACGTCATCCTCCAAGGT+AGG | 0.663458 | 1.4:+80436194 | MS.gene26901:CDS |
| GAGACTAATCCACCAAGTGG+GGG | 0.677099 | 1.4:-80436533 | None:intergenic |
| TGAGGAGCTGTCACTCTCTG+CGG | 0.688210 | 1.4:-80436353 | None:intergenic |
| TGGTTTATAGGTCAAAGATG+AGG | 0.693083 | 1.4:+80436510 | MS.gene26901:CDS |
| GACGCCGTTGTACTCCGGTG+AGG | 0.706939 | 1.4:-80436371 | None:intergenic |
| ATAGAGACTAATCCACCAAG+TGG | 0.711384 | 1.4:-80436536 | None:intergenic |
| TGGGTGAGTACTATCCAGGA+CGG | 0.714746 | 1.4:+80434727 | MS.gene26901:CDS |
| GACTGTGAAGGAGAAGCGTG+AGG | 0.721537 | 1.4:-80436120 | None:intergenic |
| GAGTTGGTGTGAGACTGTGA+AGG | 0.737605 | 1.4:-80436132 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACATAAATTTTCAAAATAA+AGG | - | chr1.4:80433717-80433736 | None:intergenic | 10.0% |
| !!! | CATTTTAAAACAATTTTTTT+TGG | + | chr1.4:80435748-80435767 | MS.gene26901:intron | 10.0% |
| !!! | TATTTTTAAAAGTAATACTT+TGG | + | chr1.4:80435645-80435664 | MS.gene26901:intron | 10.0% |
| !! | AAAATAACCAATAGTTAATA+AGG | - | chr1.4:80435631-80435650 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr1.4:80435621-80435640 | MS.gene26901:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr1.4:80435622-80435641 | None:intergenic | 15.0% |
| !! | ATAATTGAATTGATAGATAT+AGG | - | chr1.4:80435436-80435455 | None:intergenic | 15.0% |
| !! | TAAATCTATTTATGAAAGAA+AGG | + | chr1.4:80435902-80435921 | MS.gene26901:intron | 15.0% |
| !!! | TAAAAAACTTTTCTAGTTAA+AGG | - | chr1.4:80433295-80433314 | None:intergenic | 15.0% |
| !! | AAAAGATATTATTCTTTGTG+GGG | - | chr1.4:80433494-80433513 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr1.4:80435708-80435727 | MS.gene26901:intron | 20.0% |
| !! | AGAAAAGATATTATTCTTTG+TGG | - | chr1.4:80433496-80433515 | None:intergenic | 20.0% |
| !! | AGCTACAATAACATAATTTA+AGG | - | chr1.4:80434491-80434510 | None:intergenic | 20.0% |
| !! | AGTACTACGTAATTAATAAA+GGG | - | chr1.4:80434608-80434627 | None:intergenic | 20.0% |
| !! | ATAATAAAACTTACCAAAAC+AGG | - | chr1.4:80433694-80433713 | None:intergenic | 20.0% |
| !! | ATGACAAATAAGTTAAAATG+AGG | + | chr1.4:80434178-80434197 | MS.gene26901:intron | 20.0% |
| !! | ATTACAGAGTTACATTTATA+GGG | + | chr1.4:80435344-80435363 | MS.gene26901:intron | 20.0% |
| !! | CATATTTAATTAGAATCACA+AGG | - | chr1.4:80435119-80435138 | None:intergenic | 20.0% |
| !! | GAAAAGATATTATTCTTTGT+GGG | - | chr1.4:80433495-80433514 | None:intergenic | 20.0% |
| !! | GTAAAAAAAGTTAGAATCAT+GGG | - | chr1.4:80434536-80434555 | None:intergenic | 20.0% |
| !! | TAGTACTACGTAATTAATAA+AGG | - | chr1.4:80434609-80434628 | None:intergenic | 20.0% |
| !! | TATAAATGTAACTCTGTAAT+AGG | - | chr1.4:80435344-80435363 | None:intergenic | 20.0% |
| !! | TATTACAGAGTTACATTTAT+AGG | + | chr1.4:80435343-80435362 | MS.gene26901:intron | 20.0% |
| !!! | AACATTTTAATCTCAAGAAA+GGG | + | chr1.4:80435398-80435417 | MS.gene26901:intron | 20.0% |
| !!! | AATAACATAGTTTAGTTTCA+TGG | - | chr1.4:80433965-80433984 | None:intergenic | 20.0% |
| !!! | AATTCTCAACAATTTTCTTT+CGG | + | chr1.4:80435172-80435191 | MS.gene26901:intron | 20.0% |
| !!! | ACAAATTGTTCAACATTTTT+TGG | - | chr1.4:80434067-80434086 | None:intergenic | 20.0% |
| !!! | ACTTTTAAAGCTTAATTCAA+AGG | - | chr1.4:80433397-80433416 | None:intergenic | 20.0% |
| !!! | TTTATGTTTGTTTGATTTGA+AGG | + | chr1.4:80433729-80433748 | MS.gene26901:intron | 20.0% |
| !!! | TTTTCCTTTTGTAATATTGA+AGG | + | chr1.4:80433990-80434009 | MS.gene26901:intron | 20.0% |
| ! | AAAGAAACAGAAAAGATTGA+GGG | + | chr1.4:80434229-80434248 | MS.gene26901:intron | 25.0% |
| ! | AAATGGCATTATGGAAAATT+TGG | - | chr1.4:80434138-80434157 | None:intergenic | 25.0% |
| ! | AAATTATGTTATTGTAGCTG+TGG | + | chr1.4:80434492-80434511 | MS.gene26901:intron | 25.0% |
| ! | AATTACATCCATACATTACT+AGG | + | chr1.4:80435092-80435111 | MS.gene26901:intron | 25.0% |
| ! | AATTCAACTGATTACATTAC+AGG | + | chr1.4:80434648-80434667 | MS.gene26901:intron | 25.0% |
| ! | ACAACTACTACTATAGTATA+GGG | - | chr1.4:80433438-80433457 | None:intergenic | 25.0% |
| ! | AGAACCTTCAATATTACAAA+AGG | - | chr1.4:80433997-80434016 | None:intergenic | 25.0% |
| ! | ATGGTACTAATTTACAAAAG+AGG | - | chr1.4:80434583-80434602 | None:intergenic | 25.0% |
| ! | CTGTAGTATACATTAATTGA+AGG | - | chr1.4:80434381-80434400 | None:intergenic | 25.0% |
| ! | GAAAGAAAATTGTTGAGAAT+TGG | - | chr1.4:80435173-80435192 | None:intergenic | 25.0% |
| ! | GGTAAAAAAAGTTAGAATCA+TGG | - | chr1.4:80434537-80434556 | None:intergenic | 25.0% |
| ! | GTAATCAGTTGAATTAAACA+TGG | - | chr1.4:80434643-80434662 | None:intergenic | 25.0% |
| ! | GTATGTGAAATTCTATAGAA+GGG | + | chr1.4:80436475-80436494 | MS.gene26901:CDS | 25.0% |
| ! | TACAACTACTACTATAGTAT+AGG | - | chr1.4:80433439-80433458 | None:intergenic | 25.0% |
| ! | TATTTGTAGTTTATGACTGA+TGG | + | chr1.4:80435869-80435888 | MS.gene26901:intron | 25.0% |
| !! | GTAGTGTACAAAGTATTAAT+TGG | + | chr1.4:80435670-80435689 | MS.gene26901:intron | 25.0% |
| !! | TGTACAAAGTATTAATTGGA+GGG | + | chr1.4:80435674-80435693 | MS.gene26901:intron | 25.0% |
| !!! | ATGTTAGAAAGGGTATTATT+GGG | + | chr1.4:80434404-80434423 | MS.gene26901:intron | 25.0% |
| !!! | CAACATTTTAATCTCAAGAA+AGG | + | chr1.4:80435397-80435416 | MS.gene26901:intron | 25.0% |
| !!! | TCTTGTTTTTTTGTGTGTAT+AGG | + | chr1.4:80433092-80433111 | MS.gene26901:intron | 25.0% |
| !!! | TGGAAAATTTGGTAATGAAT+AGG | - | chr1.4:80434127-80434146 | None:intergenic | 25.0% |
| AAATGCGATGATTAAGAGAA+AGG | + | chr1.4:80435582-80435601 | MS.gene26901:intron | 30.0% | |
| AACCTATATCTAGTACTGTT+TGG | + | chr1.4:80434823-80434842 | MS.gene26901:intron | 30.0% | |
| AAGAGGTAAATAAAGAGTAG+TGG | - | chr1.4:80434566-80434585 | None:intergenic | 30.0% | |
| AAGATTAGGTAGAACTAGTT+CGG | + | chr1.4:80435229-80435248 | MS.gene26901:intron | 30.0% | |
| AATGCGATGATTAAGAGAAA+GGG | + | chr1.4:80435583-80435602 | MS.gene26901:intron | 30.0% | |
| ACGTAATTAATAAAGGGTGA+TGG | - | chr1.4:80434602-80434621 | None:intergenic | 30.0% | |
| ACTACAGTACATGTTAGAAA+GGG | + | chr1.4:80434394-80434413 | MS.gene26901:intron | 30.0% | |
| AGAAACAATAAATGAGAGAG+TGG | + | chr1.4:80434255-80434274 | MS.gene26901:intron | 30.0% | |
| AGAGGTAAATAAAGAGTAGT+GGG | - | chr1.4:80434565-80434584 | None:intergenic | 30.0% | |
| AGAGTTACATTTATAGGGTA+TGG | + | chr1.4:80435349-80435368 | MS.gene26901:intron | 30.0% | |
| ATTAATTGAAGGTTGAGTCT+GGG | - | chr1.4:80434370-80434389 | None:intergenic | 30.0% | |
| CACATAGCTAGGTAATTATA+TGG | - | chr1.4:80435284-80435303 | None:intergenic | 30.0% | |
| CGTATGATGAAATGGTTTAT+AGG | + | chr1.4:80436498-80436517 | MS.gene26901:CDS | 30.0% | |
| CGTATGTGAAATTCTATAGA+AGG | + | chr1.4:80436474-80436493 | MS.gene26901:CDS | 30.0% | |
| GAAAACACAAAAAGAGAAGT+CGG | - | chr1.4:80433336-80433355 | None:intergenic | 30.0% | |
| GAAAGAAACAGAAAAGATTG+AGG | + | chr1.4:80434228-80434247 | MS.gene26901:intron | 30.0% | |
| GAAATAGACCAATTGTGATA+GGG | - | chr1.4:80434454-80434473 | None:intergenic | 30.0% | |
| GAAGAAAAAGCAAGATTCTT+TGG | - | chr1.4:80433372-80433391 | None:intergenic | 30.0% | |
| GAGTTACATTTATAGGGTAT+GGG | + | chr1.4:80435350-80435369 | MS.gene26901:intron | 30.0% | |
| GGGATTTGAATTTGGTTAAT+TGG | + | chr1.4:80433819-80433838 | MS.gene26901:intron | 30.0% | |
| TACTACAGTACATGTTAGAA+AGG | + | chr1.4:80434393-80434412 | MS.gene26901:intron | 30.0% | |
| TAGCTAGGTAATTATATGGT+TGG | - | chr1.4:80435280-80435299 | None:intergenic | 30.0% | |
| TGAAATAGACCAATTGTGAT+AGG | - | chr1.4:80434455-80434474 | None:intergenic | 30.0% | |
| TTGAGATTAAAATGTTGCGA+AGG | - | chr1.4:80435394-80435413 | None:intergenic | 30.0% | |
| TTTGGAAAACTCTGTTTGTT+AGG | + | chr1.4:80434286-80434305 | MS.gene26901:intron | 30.0% | |
| ! | AAGAGGTAGAGAATCATTTT+TGG | + | chr1.4:80436451-80436470 | MS.gene26901:CDS | 30.0% |
| ! | AATAAAGAGTAGTGGGAAAA+AGG | - | chr1.4:80434558-80434577 | None:intergenic | 30.0% |
| ! | ACAGCAAATAGTGTTGTTAT+TGG | - | chr1.4:80434866-80434885 | None:intergenic | 30.0% |
| ! | ATTTTTCTGAGTTCAAAGTG+TGG | + | chr1.4:80433798-80433817 | MS.gene26901:intron | 30.0% |
| ! | GTGTACAAAGTATTAATTGG+AGG | + | chr1.4:80435673-80435692 | MS.gene26901:intron | 30.0% |
| ! | TCTTGTTTCAAATGGCATTA+TGG | - | chr1.4:80434147-80434166 | None:intergenic | 30.0% |
| ! | TGTTGTTATTGGAGTTTAAC+TGG | - | chr1.4:80434855-80434874 | None:intergenic | 30.0% |
| ! | TTTTTCTGAGTTCAAAGTGT+GGG | + | chr1.4:80433799-80433818 | MS.gene26901:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr1.4:80435539-80435558 | None:intergenic | 30.0% |
| !! | CATGTTAGAAAGGGTATTAT+TGG | + | chr1.4:80434403-80434422 | MS.gene26901:intron | 30.0% |
| !! | GGATTTATGAACTTGTTGTT+GGG | + | chr1.4:80434690-80434709 | MS.gene26901:CDS | 30.0% |
| !! | TGGATTTATGAACTTGTTGT+TGG | + | chr1.4:80434689-80434708 | MS.gene26901:CDS | 30.0% |
| !! | TTGACTTGTTGTGTAAGATT+AGG | + | chr1.4:80435215-80435234 | MS.gene26901:intron | 30.0% |
| !!! | ATTTTTTGGCATGCTTGAAA+TGG | - | chr1.4:80434053-80434072 | None:intergenic | 30.0% |
| !!! | TCTCGATCTCTGTTTTTTTA+AGG | + | chr1.4:80435018-80435037 | MS.gene26901:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr1.4:80435540-80435559 | MS.gene26901:intron | 30.0% |
| AAAAAAACAGAGATCGAGAG+TGG | - | chr1.4:80435017-80435036 | None:intergenic | 35.0% | |
| AAAACTTACCAAAACAGGTC+TGG | - | chr1.4:80433689-80433708 | None:intergenic | 35.0% | |
| AACTAAGAGCTTGTCTTTCA+TGG | + | chr1.4:80433190-80433209 | MS.gene26901:CDS | 35.0% | |
| AAGAGCAAGTAGTATATCCT+TGG | - | chr1.4:80435062-80435081 | None:intergenic | 35.0% | |
| AAGGTTCTTCACTCGTTTAT+TGG | + | chr1.4:80434009-80434028 | MS.gene26901:intron | 35.0% | |
| AAGTATGCAAAAAGTGATGG+AGG | - | chr1.4:80434777-80434796 | None:intergenic | 35.0% | |
| ACTACTATAGTATAGGGAGT+GGG | - | chr1.4:80433432-80433451 | None:intergenic | 35.0% | |
| CAAAGTGTGGGATTTGAATT+TGG | + | chr1.4:80433811-80433830 | MS.gene26901:intron | 35.0% | |
| CACAAGTATGCAAAAAGTGA+TGG | - | chr1.4:80434780-80434799 | None:intergenic | 35.0% | |
| CATTAATTGAAGGTTGAGTC+TGG | - | chr1.4:80434371-80434390 | None:intergenic | 35.0% | |
| GATACATTCCCTATCACAAT+TGG | + | chr1.4:80434443-80434462 | MS.gene26901:intron | 35.0% | |
| GTAACTATGCTTGTGTGAAA+CGG | + | chr1.4:80433124-80433143 | MS.gene26901:CDS | 35.0% | |
| TACTACTATAGTATAGGGAG+TGG | - | chr1.4:80433433-80433452 | None:intergenic | 35.0% | |
| TAGTATATCCTTGGATGGAT+TGG | - | chr1.4:80435053-80435072 | None:intergenic | 35.0% | |
| TCTCAGCTGAATTATCTGAA+GGG | + | chr1.4:80433632-80433651 | MS.gene26901:CDS | 35.0% | |
| TGGTTTATAGGTCAAAGATG+AGG | + | chr1.4:80436510-80436529 | MS.gene26901:CDS | 35.0% | |
| TTACATTTATAGGGTATGGG+AGG | + | chr1.4:80435353-80435372 | MS.gene26901:intron | 35.0% | |
| TTCTCAGCTGAATTATCTGA+AGG | + | chr1.4:80433631-80433650 | MS.gene26901:CDS | 35.0% | |
| ! | AAACGGTTTCTGAAAGTGAA+AGG | + | chr1.4:80433141-80433160 | MS.gene26901:CDS | 35.0% |
| ! | ACTTTTTGCATACTTGTGGA+AGG | + | chr1.4:80434782-80434801 | MS.gene26901:CDS | 35.0% |
| ! | AGTATGCAAAAAGTGATGGA+GGG | - | chr1.4:80434776-80434795 | None:intergenic | 35.0% |
| ! | CATTGATGGTTCGAAATCTA+GGG | - | chr1.4:80436006-80436025 | None:intergenic | 35.0% |
| ! | CCATTTGAAACAAGAGAGTT+AGG | + | chr1.4:80434152-80434171 | MS.gene26901:intron | 35.0% |
| ! | CCTAACTCTCTTGTTTCAAA+TGG | - | chr1.4:80434155-80434174 | None:intergenic | 35.0% |
| ! | TTTCAGAGGTATGAAGAAAG+TGG | - | chr1.4:80433471-80433490 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr1.4:80435774-80435793 | MS.gene26901:intron | 35.0% |
| !! | GTCTTGTTTGTAGTTGTGTT+GGG | + | chr1.4:80434884-80434903 | MS.gene26901:intron | 35.0% |
| !! | TCGTTTATTGGCTTTCACAA+TGG | + | chr1.4:80434021-80434040 | MS.gene26901:CDS | 35.0% |
| !! | TCTGATAGTCTTGTTTCATG+CGG | - | chr1.4:80433862-80433881 | None:intergenic | 35.0% |
| !! | TGAAGTTTGAGTTGAAGAAG+TGG | - | chr1.4:80433071-80433090 | None:intergenic | 35.0% |
| !! | TGTCTTGTTTGTAGTTGTGT+TGG | + | chr1.4:80434883-80434902 | MS.gene26901:intron | 35.0% |
| !! | TTGGGAGCATTGAAAATTGT+GGG | + | chr1.4:80434708-80434727 | MS.gene26901:CDS | 35.0% |
| !!! | AATCTTGGCCGTTGATTTTA+GGG | - | chr1.4:80436087-80436106 | None:intergenic | 35.0% |
| !!! | CATCACTTTTTGCATACTTG+TGG | + | chr1.4:80434778-80434797 | MS.gene26901:CDS | 35.0% |
| !!! | CGATCTCTGTTTTTTTAAGG+TGG | + | chr1.4:80435021-80435040 | MS.gene26901:intron | 35.0% |
| AACACCTCTTACTGTCAAAC+AGG | + | chr1.4:80433010-80433029 | MS.gene26901:CDS | 40.0% | |
| AAGTCGTTGTAGTCCATTGA+TGG | - | chr1.4:80436020-80436039 | None:intergenic | 40.0% | |
| AATAAATGAGAGAGTGGAGC+AGG | + | chr1.4:80434261-80434280 | MS.gene26901:intron | 40.0% | |
| AATAGTGTGTTGTCATGTGC+AGG | + | chr1.4:80435932-80435951 | MS.gene26901:intron | 40.0% | |
| ACTTGAACTCCTCAAAGACA+AGG | + | chr1.4:80432944-80432963 | MS.gene26901:CDS | 40.0% | |
| AGCTGAATTATCTGAAGGGT+TGG | + | chr1.4:80433636-80433655 | MS.gene26901:CDS | 40.0% | |
| ATAGAGACTAATCCACCAAG+TGG | - | chr1.4:80436539-80436558 | None:intergenic | 40.0% | |
| ATAGTGTGTTGTCATGTGCA+GGG | + | chr1.4:80435933-80435952 | MS.gene26901:intron | 40.0% | |
| CAAAGACAAGGAAACTGCTA+AGG | + | chr1.4:80432956-80432975 | MS.gene26901:CDS | 40.0% | |
| CACAAGGACCTAGTAATGTA+TGG | - | chr1.4:80435103-80435122 | None:intergenic | 40.0% | |
| CCCATCAACCCTAAAATCAA+CGG | + | chr1.4:80436076-80436095 | MS.gene26901:CDS | 40.0% | |
| CCTAGATTTCGAACCATCAA+TGG | + | chr1.4:80436004-80436023 | MS.gene26901:CDS | 40.0% | |
| CTAAAATCAACGGCCAAGAT+TGG | + | chr1.4:80436086-80436105 | MS.gene26901:CDS | 40.0% | |
| CTACTATAGTATAGGGAGTG+GGG | - | chr1.4:80433431-80433450 | None:intergenic | 40.0% | |
| GATAATGTGAAGGTGGAAAG+AGG | + | chr1.4:80436434-80436453 | MS.gene26901:CDS | 40.0% | |
| GCAAGTAGTATATCCTTGGA+TGG | - | chr1.4:80435058-80435077 | None:intergenic | 40.0% | |
| GGCCAAACAGTACTAGATAT+AGG | - | chr1.4:80434828-80434847 | None:intergenic | 40.0% | |
| TAGAGACTAATCCACCAAGT+GGG | - | chr1.4:80436538-80436557 | None:intergenic | 40.0% | |
| TAGCAGTTTCCTTGTCTTTG+AGG | - | chr1.4:80432956-80432975 | None:intergenic | 40.0% | |
| TATTCTTTGTGGGGTTTCAG+AGG | - | chr1.4:80433485-80433504 | None:intergenic | 40.0% | |
| TATTGGAGTTTAACTGGCAG+TGG | - | chr1.4:80434849-80434868 | None:intergenic | 40.0% | |
| TGTACCTGTTTGACAGTAAG+AGG | - | chr1.4:80433017-80433036 | None:intergenic | 40.0% | |
| ! | CCATTGATGGTTCGAAATCT+AGG | - | chr1.4:80436007-80436026 | None:intergenic | 40.0% |
| ! | CTCTGTTTGTTAGGATTCAC+CGG | + | chr1.4:80434295-80434314 | MS.gene26901:intron | 40.0% |
| ! | TAGAAGGGCGTATGATGAAA+TGG | + | chr1.4:80436490-80436509 | MS.gene26901:CDS | 40.0% |
| ! | TGATGAATCCAGACCTGTTT+TGG | + | chr1.4:80433678-80433697 | MS.gene26901:CDS | 40.0% |
| ! | TGGTAATGAATAGGTGTGTG+TGG | - | chr1.4:80434118-80434137 | None:intergenic | 40.0% |
| !! | ATTGGCTTTCACAATGGAAG+TGG | + | chr1.4:80434027-80434046 | MS.gene26901:CDS | 40.0% |
| !! | CATGTTGATAGCTCAACGAA+TGG | - | chr1.4:80435966-80435985 | None:intergenic | 40.0% |
| !! | GTTGGGAGCATTGAAAATTG+TGG | + | chr1.4:80434707-80434726 | MS.gene26901:CDS | 40.0% |
| !! | TATCCTTGGATGGATTGGAT+TGG | - | chr1.4:80435048-80435067 | None:intergenic | 40.0% |
| !! | TGGAGAGAAAGCATTGTTAC+TGG | + | chr1.4:80433210-80433229 | MS.gene26901:CDS | 40.0% |
| !!! | CAATCTTGGCCGTTGATTTT+AGG | - | chr1.4:80436088-80436107 | None:intergenic | 40.0% |
| !!! | CCGTTGATTTTAGGGTTGAT+GGG | - | chr1.4:80436079-80436098 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1.4:80435778-80435797 | MS.gene26901:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr1.4:80435797-80435778 | None:intergenic | 40.0% |
| AAACCATGGTACCTAAGCCT+AGG | + | chr1.4:80436164-80436183 | MS.gene26901:CDS | 45.0% | |
| AAACGGAAAGGTGAGTGTGA+CGG | - | chr1.4:80436583-80436602 | None:intergenic | 45.0% | |
| AACTCGACTCACTCAAACCA+TGG | + | chr1.4:80436150-80436169 | MS.gene26901:CDS | 45.0% | |
| AATGCTTTGCTTAACCGTCC+TGG | - | chr1.4:80434744-80434763 | None:intergenic | 45.0% | |
| ACAACAACTGCGCATGTAAC+TGG | + | chr1.4:80434990-80435009 | MS.gene26901:intron | 45.0% | |
| AGAAACGCTGAGAAACGGAA+AGG | - | chr1.4:80436595-80436614 | None:intergenic | 45.0% | |
| AGAGACTAATCCACCAAGTG+GGG | - | chr1.4:80436537-80436556 | None:intergenic | 45.0% | |
| ATGAATAGGTGTGTGTGGAG+TGG | - | chr1.4:80434113-80434132 | None:intergenic | 45.0% | |
| ATGGTTTGAGTGAGTCGAGT+TGG | - | chr1.4:80436151-80436170 | None:intergenic | 45.0% | |
| ATTGTGGGTGAGTACTATCC+AGG | + | chr1.4:80434723-80434742 | MS.gene26901:CDS | 45.0% | |
| GGATAGGGATAATGTGAAGG+TGG | + | chr1.4:80436427-80436446 | MS.gene26901:CDS | 45.0% | |
| GGATGAGCATGAACCAATCT+TGG | - | chr1.4:80436102-80436121 | None:intergenic | 45.0% | |
| ! | GGCTTTTACAGATCAGCATC+TGG | + | chr1.4:80434669-80434688 | MS.gene26901:intron | 45.0% |
| !! | ATCTGAAGGGTTGGCTTATG+TGG | + | chr1.4:80433645-80433664 | MS.gene26901:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1.4:80435777-80435796 | MS.gene26901:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr1.4:80435796-80435777 | None:intergenic | 45.0% |
| !!! | GCCGTTGATTTTAGGGTTGA+TGG | - | chr1.4:80436080-80436099 | None:intergenic | 45.0% |
| !!! | AAAATAATAATTTTTAATGA+TGG | + | chr1.4:80433561-80433580 | MS.gene26901:intron | 5.0% |
| !!! | AAATAATAATTTTTAATGAT+GGG | + | chr1.4:80433562-80433581 | MS.gene26901:intron | 5.0% |
| AACACGTCATCCTCCAAGGT+AGG | + | chr1.4:80436194-80436213 | MS.gene26901:CDS | 50.0% | |
| AATCTGAGGGATGAGGCTCT+TGG | - | chr1.4:80436053-80436072 | None:intergenic | 50.0% | |
| ACCAATAGCACGTAACCCAC+TGG | + | chr1.4:80436286-80436305 | MS.gene26901:CDS | 50.0% | |
| AGACAACACGTCATCCTCCA+AGG | + | chr1.4:80436190-80436209 | MS.gene26901:CDS | 50.0% | |
| AGCACGTGAGTCACATAGCT+AGG | - | chr1.4:80435295-80435314 | None:intergenic | 50.0% | |
| ATCTGAGGGATGAGGCTCTT+GGG | - | chr1.4:80436052-80436071 | None:intergenic | 50.0% | |
| ATGACGTGTTGTCTCCTCCT+AGG | - | chr1.4:80436184-80436203 | None:intergenic | 50.0% | |
| CACAAAAAGAGAAGTCGGCG+TGG | - | chr1.4:80433331-80433350 | None:intergenic | 50.0% | |
| CCAATAGCACGTAACCCACT+GGG | + | chr1.4:80436287-80436306 | MS.gene26901:CDS | 50.0% | |
| GAGACTAATCCACCAAGTGG+GGG | - | chr1.4:80436536-80436555 | None:intergenic | 50.0% | |
| GCGGGATAGGGATAATGTGA+AGG | + | chr1.4:80436424-80436443 | MS.gene26901:CDS | 50.0% | |
| GGCGTCGTTTCTTCAATCTC+CGG | + | chr1.4:80436388-80436407 | MS.gene26901:CDS | 50.0% | |
| GGTCCAATCCAATCCATCCA+AGG | + | chr1.4:80435042-80435061 | MS.gene26901:intron | 50.0% | |
| GTGTAAGGGATGATGCTGCT+GGG | - | chr1.4:80436235-80436254 | None:intergenic | 50.0% | |
| GTGTGACGGCGTCTAATATG+AGG | - | chr1.4:80436569-80436588 | None:intergenic | 50.0% | |
| TCACATTATCCCTATCCCGC+CGG | - | chr1.4:80436424-80436443 | None:intergenic | 50.0% | |
| TGGGTGAGTACTATCCAGGA+CGG | + | chr1.4:80434727-80434746 | MS.gene26901:CDS | 50.0% | |
| TGTAAGGGATGATGCTGCTG+GGG | - | chr1.4:80436234-80436253 | None:intergenic | 50.0% | |
| TGTTGTCTCCTCCTAGGCTT+AGG | - | chr1.4:80436178-80436197 | None:intergenic | 50.0% | |
| ! | AATCTCCGGCGACGTTTTTC+CGG | + | chr1.4:80436402-80436421 | MS.gene26901:CDS | 50.0% |
| ! | ACGTGCTATTGGTGAAGCGA+AGG | - | chr1.4:80436279-80436298 | None:intergenic | 50.0% |
| ! | AGTCGGCGTGGTTTTCACAA+CGG | - | chr1.4:80433319-80433338 | None:intergenic | 50.0% |
| ! | GTTGAGTCTGGGACACAACA+GGG | - | chr1.4:80434359-80434378 | None:intergenic | 50.0% |
| ! | GTTTGTTAGGATTCACCGGC+AGG | + | chr1.4:80434299-80434318 | MS.gene26901:intron | 50.0% |
| ! | TTGAGTCTGGGACACAACAG+GGG | - | chr1.4:80434358-80434377 | None:intergenic | 50.0% |
| !! | GAGTTGGTGTGAGACTGTGA+AGG | - | chr1.4:80436135-80436154 | None:intergenic | 50.0% |
| !! | GGTTGATGGGTCGAATCTGA+GGG | - | chr1.4:80436066-80436085 | None:intergenic | 50.0% |
| AGAGAGTGACAGCTCCTCAC+CGG | + | chr1.4:80436357-80436376 | MS.gene26901:CDS | 55.0% | |
| AGCTCCTCACCGGAGTACAA+CGG | + | chr1.4:80436367-80436386 | MS.gene26901:CDS | 55.0% | |
| CACATTCTGTGTGCTCCCTC+AGG | - | chr1.4:80434326-80434345 | None:intergenic | 55.0% | |
| CCATGGTACCTAAGCCTAGG+AGG | + | chr1.4:80436167-80436186 | MS.gene26901:CDS | 55.0% | |
| CCTCCTAGGCTTAGGTACCA+TGG | - | chr1.4:80436170-80436189 | None:intergenic | 55.0% | |
| GAAACGACGCCGTTGTACTC+CGG | - | chr1.4:80436379-80436398 | None:intergenic | 55.0% | |
| GAGAGAGTGGAGCAGGCATT+TGG | + | chr1.4:80434268-80434287 | MS.gene26901:intron | 55.0% | |
| GGTGTAAGGGATGATGCTGC+TGG | - | chr1.4:80436236-80436255 | None:intergenic | 55.0% | |
| TCAAAGATGAGGCCCCCACT+TGG | + | chr1.4:80436521-80436540 | MS.gene26901:CDS | 55.0% | |
| TGAGGAGCTGTCACTCTCTG+CGG | - | chr1.4:80436356-80436375 | None:intergenic | 55.0% | |
| TGGGTCGAATCTGAGGGATG+AGG | - | chr1.4:80436060-80436079 | None:intergenic | 55.0% | |
| ! | GACGTTTTTCCGGCGGGATA+GGG | + | chr1.4:80436412-80436431 | MS.gene26901:CDS | 55.0% |
| ! | GACTGTGAAGGAGAAGCGTG+AGG | - | chr1.4:80436123-80436142 | None:intergenic | 55.0% |
| ! | GGGAGCACACAGAATGTGTC+CGG | + | chr1.4:80434328-80434347 | MS.gene26901:intron | 55.0% |
| ! | GGTTGAGTCTGGGACACAAC+AGG | - | chr1.4:80434360-80434379 | None:intergenic | 55.0% |
| ! | GTCGGCGTGGTTTTCACAAC+GGG | - | chr1.4:80433318-80433337 | None:intergenic | 55.0% |
| ! | TCTGCGGCAGTGGTGTTGAA+GGG | - | chr1.4:80436340-80436359 | None:intergenic | 55.0% |
| !! | AGCGAGCGTTGAGTGGTGTA+AGG | - | chr1.4:80436250-80436269 | None:intergenic | 55.0% |
| !! | CCCAGTGGGTTACGTGCTAT+TGG | - | chr1.4:80436290-80436309 | None:intergenic | 55.0% |
| !! | GAAGGGTTGGCTTATGTGGC+TGG | + | chr1.4:80433649-80433668 | MS.gene26901:CDS | 55.0% |
| !! | GCGAGCGTTGAGTGGTGTAA+GGG | - | chr1.4:80436249-80436268 | None:intergenic | 55.0% |
| !! | GGGTTGATGGGTCGAATCTG+AGG | - | chr1.4:80436067-80436086 | None:intergenic | 55.0% |
| AACAACCCCTTCCTGCTGGC+TGG | - | chr1.4:80436317-80436336 | None:intergenic | 60.0% | |
| AAGATGAGGCCCCCACTTGG+TGG | + | chr1.4:80436524-80436543 | MS.gene26901:CDS | 60.0% | |
| AAGGGATGATGCTGCTGGGG+AGG | - | chr1.4:80436231-80436250 | None:intergenic | 60.0% | |
| AGGGAACAACCCCTTCCTGC+TGG | - | chr1.4:80436321-80436340 | None:intergenic | 60.0% | |
| AGGGATGATGCTGCTGGGGA+GGG | - | chr1.4:80436230-80436249 | None:intergenic | 60.0% | |
| GAGGGATGAGGCTCTTGGGT+AGG | - | chr1.4:80436048-80436067 | None:intergenic | 60.0% | |
| GATTCACCGGCAGGACCTGA+GGG | + | chr1.4:80434308-80434327 | MS.gene26901:intron | 60.0% | |
| ! | CGACGTTTTTCCGGCGGGAT+AGG | + | chr1.4:80436411-80436430 | MS.gene26901:CDS | 60.0% |
| ! | CTCTGCGGCAGTGGTGTTGA+AGG | - | chr1.4:80436341-80436360 | None:intergenic | 60.0% |
| ! | GCTAGTGGGTCCTACCTTGG+AGG | - | chr1.4:80436207-80436226 | None:intergenic | 60.0% |
| !! | GAGAGTGAGCGAGCGTTGAG+TGG | - | chr1.4:80436257-80436276 | None:intergenic | 60.0% |
| GACGCCGTTGTACTCCGGTG+AGG | - | chr1.4:80436374-80436393 | None:intergenic | 65.0% | |
| GCTGTCACTCTCTGCGGCAG+TGG | - | chr1.4:80436350-80436369 | None:intergenic | 65.0% | |
| GGATTCACCGGCAGGACCTG+AGG | + | chr1.4:80434307-80434326 | MS.gene26901:intron | 65.0% | |
| GGGATGATGCTGCTGGGGAG+GGG | - | chr1.4:80436229-80436248 | None:intergenic | 65.0% | |
| TCCCGCCGGAAAAACGTCGC+CGG | - | chr1.4:80436410-80436429 | None:intergenic | 65.0% | |
| TGTGCTCCCTCAGGTCCTGC+CGG | - | chr1.4:80434317-80434336 | None:intergenic | 65.0% | |
| ! | AACCCCTTCCTGCTGGCTGG+TGG | - | chr1.4:80436314-80436333 | None:intergenic | 65.0% |
| ! | ACCCCTTCCTGCTGGCTGGT+GGG | - | chr1.4:80436313-80436332 | None:intergenic | 65.0% |
| ! | CTCCGGCGACGTTTTTCCGG+CGG | + | chr1.4:80436405-80436424 | MS.gene26901:CDS | 65.0% |
| ! | GGGGCTAGTGGGTCCTACCT+TGG | - | chr1.4:80436210-80436229 | None:intergenic | 65.0% |
| ! | TCCGGCGACGTTTTTCCGGC+GGG | + | chr1.4:80436406-80436425 | MS.gene26901:CDS | 65.0% |
| !! | GGGACACAACAGGGGCACTC+CGG | - | chr1.4:80434350-80434369 | None:intergenic | 65.0% |
| GCCCACCAGCCAGCAGGAAG+GGG | + | chr1.4:80436309-80436328 | MS.gene26901:CDS | 70.0% | |
| GGCCCACCAGCCAGCAGGAA+GGG | + | chr1.4:80436308-80436327 | MS.gene26901:CDS | 70.0% | |
| TGCTGCTGGGGAGGGGCTAG+TGG | - | chr1.4:80436222-80436241 | None:intergenic | 70.0% | |
| ! | GCTGCTGGGGAGGGGCTAGT+GGG | - | chr1.4:80436221-80436240 | None:intergenic | 70.0% |
| ! | TGCTGGCTGGTGGGCCCAGT+GGG | - | chr1.4:80436304-80436323 | None:intergenic | 70.0% |
| CACTGGGCCCACCAGCCAGC+AGG | + | chr1.4:80436303-80436322 | MS.gene26901:CDS | 75.0% | |
| GGGCCCACCAGCCAGCAGGA+AGG | + | chr1.4:80436307-80436326 | MS.gene26901:CDS | 75.0% | |
| ! | CTGCTGGCTGGTGGGCCCAG+TGG | - | chr1.4:80436305-80436324 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 80432933 | 80436616 | 80432933 | ID=MS.gene26901 |
| chr1.4 | mRNA | 80432933 | 80436616 | 80432933 | ID=MS.gene26901.t1;Parent=MS.gene26901 |
| chr1.4 | exon | 80432933 | 80433031 | 80432933 | ID=MS.gene26901.t1.exon1;Parent=MS.gene26901.t1 |
| chr1.4 | CDS | 80432933 | 80433031 | 80432933 | ID=cds.MS.gene26901.t1;Parent=MS.gene26901.t1 |
| chr1.4 | exon | 80433114 | 80433231 | 80433114 | ID=MS.gene26901.t1.exon2;Parent=MS.gene26901.t1 |
| chr1.4 | CDS | 80433114 | 80433231 | 80433114 | ID=cds.MS.gene26901.t1;Parent=MS.gene26901.t1 |
| chr1.4 | exon | 80433611 | 80433699 | 80433611 | ID=MS.gene26901.t1.exon3;Parent=MS.gene26901.t1 |
| chr1.4 | CDS | 80433611 | 80433699 | 80433611 | ID=cds.MS.gene26901.t1;Parent=MS.gene26901.t1 |
| chr1.4 | exon | 80433854 | 80433900 | 80433854 | ID=MS.gene26901.t1.exon4;Parent=MS.gene26901.t1 |
| chr1.4 | CDS | 80433854 | 80433900 | 80433854 | ID=cds.MS.gene26901.t1;Parent=MS.gene26901.t1 |
| chr1.4 | exon | 80434012 | 80434103 | 80434012 | ID=MS.gene26901.t1.exon5;Parent=MS.gene26901.t1 |
| chr1.4 | CDS | 80434012 | 80434103 | 80434012 | ID=cds.MS.gene26901.t1;Parent=MS.gene26901.t1 |
| chr1.4 | exon | 80434670 | 80434803 | 80434670 | ID=MS.gene26901.t1.exon6;Parent=MS.gene26901.t1 |
| chr1.4 | CDS | 80434670 | 80434803 | 80434670 | ID=cds.MS.gene26901.t1;Parent=MS.gene26901.t1 |
| chr1.4 | exon | 80435954 | 80436616 | 80435954 | ID=MS.gene26901.t1.exon7;Parent=MS.gene26901.t1 |
| chr1.4 | CDS | 80435954 | 80436616 | 80435954 | ID=cds.MS.gene26901.t1;Parent=MS.gene26901.t1 |
| Gene Sequence |
| Protein sequence |
