Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26902.t1 | XP_003592403.2 | 95 | 660 | 30 | 3 | 1 | 659 | 1 | 658 | 0.00E+00 | 1282.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26902.t1 | O23349 | 59.9 | 653 | 252 | 7 | 13 | 659 | 1 | 649 | 5.6e-238 | 825.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26902.t1 | G7ID64 | 95.0 | 660 | 30 | 3 | 1 | 659 | 1 | 658 | 0.0e+00 | 1282.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80066 | MS.gene26902 | PPI |
| MS.gene26902 | MS.gene33547 | PPI |
| MS.gene26906 | MS.gene26902 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26902.t1 | MTR_1g104550 | 95.000 | 660 | 30 | 3 | 1 | 659 | 1 | 658 | 0.0 | 1295 |
| MS.gene26902.t1 | MTR_1g104590 | 53.058 | 654 | 293 | 5 | 18 | 659 | 7 | 658 | 0.0 | 740 |
| MS.gene26902.t1 | MTR_4g117660 | 48.504 | 635 | 311 | 6 | 34 | 659 | 33 | 660 | 0.0 | 640 |
| MS.gene26902.t1 | MTR_4g045887 | 45.606 | 660 | 344 | 7 | 10 | 659 | 4 | 658 | 0.0 | 626 |
| MS.gene26902.t1 | MTR_4g117610 | 46.044 | 632 | 330 | 5 | 34 | 659 | 27 | 653 | 0.0 | 611 |
| MS.gene26902.t1 | MTR_4g117670 | 50.000 | 554 | 268 | 4 | 112 | 659 | 26 | 576 | 0.0 | 579 |
| MS.gene26902.t1 | MTR_3g080500 | 45.483 | 642 | 327 | 10 | 34 | 659 | 78 | 712 | 0.0 | 560 |
| MS.gene26902.t1 | MTR_3g077080 | 29.765 | 682 | 405 | 21 | 34 | 659 | 8 | 671 | 4.86e-79 | 266 |
| MS.gene26902.t1 | MTR_8g069505 | 29.308 | 679 | 412 | 20 | 34 | 659 | 8 | 671 | 1.09e-78 | 265 |
| MS.gene26902.t1 | MTR_3g077080 | 29.765 | 682 | 405 | 21 | 34 | 659 | 73 | 736 | 1.69e-78 | 266 |
| MS.gene26902.t1 | MTR_8g069505 | 29.394 | 677 | 410 | 20 | 34 | 657 | 32 | 693 | 2.07e-78 | 264 |
| MS.gene26902.t1 | MTR_8g069505 | 29.308 | 679 | 412 | 20 | 34 | 659 | 69 | 732 | 4.03e-78 | 264 |
| MS.gene26902.t1 | MTR_8g069505 | 29.308 | 679 | 412 | 20 | 34 | 659 | 82 | 745 | 5.65e-78 | 264 |
| MS.gene26902.t1 | MTR_5g033170 | 29.118 | 680 | 413 | 20 | 34 | 659 | 44 | 708 | 3.20e-77 | 261 |
| MS.gene26902.t1 | MTR_5g033170 | 29.042 | 668 | 405 | 20 | 34 | 647 | 44 | 696 | 1.84e-74 | 253 |
| MS.gene26902.t1 | MTR_3g077080 | 30.943 | 530 | 328 | 13 | 153 | 659 | 1 | 515 | 5.44e-72 | 243 |
| MS.gene26902.t1 | MTR_8g069505 | 28.287 | 502 | 298 | 16 | 34 | 487 | 8 | 495 | 9.28e-50 | 182 |
| MS.gene26902.t1 | MTR_8g069505 | 28.287 | 502 | 298 | 16 | 34 | 487 | 82 | 569 | 2.37e-49 | 182 |
| MS.gene26902.t1 | MTR_8g069505 | 28.287 | 502 | 298 | 16 | 34 | 487 | 69 | 556 | 2.47e-49 | 182 |
| MS.gene26902.t1 | MTR_8g069505 | 28.287 | 502 | 298 | 16 | 34 | 487 | 82 | 569 | 2.72e-49 | 182 |
| MS.gene26902.t1 | MTR_4g098910 | 46.535 | 101 | 46 | 3 | 67 | 163 | 27 | 123 | 1.45e-17 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26902.t1 | AT4G14940 | 61.256 | 653 | 243 | 7 | 13 | 659 | 1 | 649 | 0.0 | 835 |
| MS.gene26902.t1 | AT1G31690 | 50.629 | 636 | 303 | 6 | 33 | 659 | 26 | 659 | 0.0 | 654 |
| MS.gene26902.t1 | AT1G31710 | 50.157 | 638 | 304 | 7 | 34 | 659 | 28 | 663 | 0.0 | 651 |
| MS.gene26902.t1 | AT1G31670 | 50.784 | 638 | 283 | 11 | 33 | 659 | 106 | 723 | 0.0 | 629 |
| MS.gene26902.t1 | AT1G62810 | 44.531 | 640 | 335 | 10 | 34 | 659 | 60 | 693 | 0.0 | 549 |
| MS.gene26902.t1 | AT4G12290 | 43.740 | 647 | 336 | 13 | 34 | 659 | 82 | 721 | 0.0 | 539 |
| MS.gene26902.t1 | AT3G43670 | 44.375 | 640 | 336 | 10 | 34 | 659 | 41 | 674 | 0.0 | 538 |
| MS.gene26902.t1 | AT4G12290 | 42.044 | 597 | 318 | 13 | 34 | 609 | 82 | 671 | 2.58e-154 | 461 |
| MS.gene26902.t1 | AT4G12280 | 48.736 | 277 | 133 | 3 | 391 | 659 | 5 | 280 | 2.10e-94 | 293 |
| MS.gene26902.t1 | AT4G12270 | 37.805 | 410 | 220 | 14 | 3 | 383 | 49 | 452 | 4.15e-79 | 259 |
| MS.gene26902.t1 | AT2G42490 | 28.719 | 679 | 416 | 20 | 34 | 659 | 80 | 743 | 7.77e-77 | 261 |
Find 152 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAACTTTGTCAGTTTATT+AGG | 0.060118 | 1.4:-80455831 | None:intergenic |
| TATAGAAGCATGACACTTTA+AGG | 0.116614 | 1.4:-80453856 | None:intergenic |
| CCCTGAACTGTTGGCATTAC+TGG | 0.128920 | 1.4:-80457080 | None:intergenic |
| GTTACATGTAGCAACTATTT+TGG | 0.149249 | 1.4:-80454032 | None:intergenic |
| TTTATGGATGTTGGGGAATT+TGG | 0.164942 | 1.4:+80454274 | MS.gene26902:CDS |
| ATGAAGTGAAATGGGGTAAT+TGG | 0.194135 | 1.4:+80454086 | MS.gene26902:CDS |
| CCATCTTTCTGACTTATTAT+AGG | 0.201107 | 1.4:-80455970 | None:intergenic |
| GGGATGAATCAGTAAATATT+TGG | 0.213588 | 1.4:+80453879 | MS.gene26902:CDS |
| CATCTTTCTGACTTATTATA+GGG | 0.253755 | 1.4:-80455969 | None:intergenic |
| TCCAGTAATGCCAACAGTTC+AGG | 0.266063 | 1.4:+80457079 | MS.gene26902:CDS |
| AATTACCCCATTTCACTTCA+TGG | 0.275191 | 1.4:-80454084 | None:intergenic |
| ACAAAATGATAGGTAATATT+AGG | 0.286083 | 1.4:-80453491 | None:intergenic |
| AATCAACAATCCCACAAAAT+TGG | 0.291880 | 1.4:+80454462 | MS.gene26902:CDS |
| AAATTTGTACCTTCAGCTTT+AGG | 0.299315 | 1.4:-80453989 | None:intergenic |
| TTAAAGTGTCATGCTTCTAT+AGG | 0.300359 | 1.4:+80453858 | MS.gene26902:CDS |
| TAGCTCATGGGTTTCACCTT+TGG | 0.306251 | 1.4:-80453615 | None:intergenic |
| CTAACTTTGTCAGTTTATTA+GGG | 0.313939 | 1.4:-80455830 | None:intergenic |
| AATATAGGAGAGTGATGTAT+AGG | 0.327555 | 1.4:+80454188 | MS.gene26902:CDS |
| ACTACGATTATATTCTTGAT+TGG | 0.332434 | 1.4:+80455198 | MS.gene26902:CDS |
| TAGTAGATGACAACCACTTT+AGG | 0.334817 | 1.4:-80453544 | None:intergenic |
| CCTAATAAACTGACAAAGTT+AGG | 0.341168 | 1.4:+80455831 | MS.gene26902:CDS |
| AGACAAATATAAGCCCCTTT+TGG | 0.346719 | 1.4:-80453774 | None:intergenic |
| GAACACCAAGGAAGAGTTAC+TGG | 0.348403 | 1.4:+80455724 | MS.gene26902:CDS |
| GATGTTGGGGAATTTGGTTT+TGG | 0.350716 | 1.4:+80454280 | MS.gene26902:CDS |
| ACATGTAACATATCAAATAT+TGG | 0.356378 | 1.4:+80454046 | MS.gene26902:CDS |
| ACTTGTTGCACCTCACCATT+AGG | 0.359348 | 1.4:-80454379 | None:intergenic |
| CAAATAAAAGAAAGAGCATT+TGG | 0.360244 | 1.4:+80455567 | MS.gene26902:CDS |
| ATATAGGAGAGTGATGTATA+GGG | 0.363872 | 1.4:+80454189 | MS.gene26902:CDS |
| CCAGGGAAATGCAGTGTATA+TGG | 0.368289 | 1.4:+80454339 | MS.gene26902:CDS |
| AAGGTCAAAGCAAGTGGCTT+TGG | 0.369667 | 1.4:+80455702 | MS.gene26902:CDS |
| TAAAAGACCATGAAGTGAAA+TGG | 0.370388 | 1.4:+80454077 | MS.gene26902:CDS |
| TAGGTAATCAAGTGGGTTAC+CGG | 0.374528 | 1.4:+80455850 | MS.gene26902:CDS |
| GGGAAGCTGAGGCTAGAATT+AGG | 0.374969 | 1.4:+80455772 | MS.gene26902:CDS |
| TATGCATAGGTGGCTCTAAC+AGG | 0.375675 | 1.4:+80455504 | MS.gene26902:intron |
| TTTATTTCAGTTGGAGATAG+AGG | 0.376408 | 1.4:-80453425 | None:intergenic |
| AAAAGACCATGAAGTGAAAT+GGG | 0.385354 | 1.4:+80454078 | MS.gene26902:CDS |
| GAGATGATGGCTTAGCCGTT+TGG | 0.398485 | 1.4:+80456024 | MS.gene26902:CDS |
| ACTGGAAAATCTTCTTGATA+AGG | 0.399267 | 1.4:-80457062 | None:intergenic |
| ACAACCGGTTACTTCTTTGT+TGG | 0.399751 | 1.4:+80455884 | MS.gene26902:CDS |
| TTTCCCTGGCAATCAACCTT+GGG | 0.401712 | 1.4:-80454325 | None:intergenic |
| CTACGATTATATTCTTGATT+GGG | 0.402457 | 1.4:+80455199 | MS.gene26902:CDS |
| GTATAAGAAGCTCTTCTTTG+TGG | 0.406138 | 1.4:-80455921 | None:intergenic |
| TTATGTATAATGATAGATAC+AGG | 0.412401 | 1.4:+80453957 | MS.gene26902:CDS |
| CAAAGAGTCAATTGCCAAAA+GGG | 0.412911 | 1.4:+80453760 | MS.gene26902:CDS |
| TGAAGTGAAATGGGGTAATT+GGG | 0.414227 | 1.4:+80454087 | MS.gene26902:CDS |
| TAAAGTGTCATGCTTCTATA+GGG | 0.417273 | 1.4:+80453859 | MS.gene26902:CDS |
| AGTAATGTGATTCCTTCAAT+AGG | 0.423251 | 1.4:-80453908 | None:intergenic |
| CCGGTTGATTAGTGGACAAC+CGG | 0.428443 | 1.4:+80455869 | MS.gene26902:CDS |
| GTGGGTTACCGGTTGATTAG+TGG | 0.428815 | 1.4:+80455861 | MS.gene26902:CDS |
| ATTTCCCTGGCAATCAACCT+TGG | 0.429441 | 1.4:-80454326 | None:intergenic |
| CCATTCACAATTGGTTGGTA+TGG | 0.433670 | 1.4:+80453812 | MS.gene26902:CDS |
| CCAGTAATGCCAACAGTTCA+GGG | 0.434764 | 1.4:+80457080 | MS.gene26902:CDS |
| GCAACCCAAGGTTGATTGCC+AGG | 0.438150 | 1.4:+80454321 | MS.gene26902:CDS |
| CTGGAGGGTTCTATGCTGAT+AGG | 0.440718 | 1.4:+80455994 | MS.gene26902:CDS |
| ATAGAAGCATGACACTTTAA+GGG | 0.442635 | 1.4:-80453855 | None:intergenic |
| TTGGCTTGTCTAGGAATACT+AGG | 0.444539 | 1.4:-80453578 | None:intergenic |
| GGATGAATCAGTAAATATTT+GGG | 0.448183 | 1.4:+80453880 | MS.gene26902:CDS |
| AAGAGCATTTGGAACCTTAG+TGG | 0.448202 | 1.4:+80455578 | MS.gene26902:CDS |
| AAAAGCTCAATGAATGTAAA+CGG | 0.449384 | 1.4:-80453701 | None:intergenic |
| TTTATCAAACCTTGATGCTA+TGG | 0.452224 | 1.4:-80453318 | None:intergenic |
| CTAAAATACCATTCTAATGT+AGG | 0.459209 | 1.4:-80454247 | None:intergenic |
| AACTAGACATTGTGCAATCA+TGG | 0.462369 | 1.4:-80453348 | None:intergenic |
| AAAGTGGCAGCATAAAAGTT+GGG | 0.464025 | 1.4:+80455231 | MS.gene26902:CDS |
| TGAGACATTTGTTCCTTACA+TGG | 0.466817 | 1.4:+80454222 | MS.gene26902:CDS |
| TCTTGTGTACCATTCACAAT+TGG | 0.469454 | 1.4:+80453803 | MS.gene26902:CDS |
| TCTAGCCTCAGCTTCCCTCT+TGG | 0.471207 | 1.4:-80455766 | None:intergenic |
| CCGGTTGTCCACTAATCAAC+CGG | 0.473694 | 1.4:-80455869 | None:intergenic |
| TCAAAGAGTCAATTGCCAAA+AGG | 0.480601 | 1.4:+80453759 | MS.gene26902:CDS |
| TCATCCAACAAAGAAGTAAC+CGG | 0.481046 | 1.4:-80455888 | None:intergenic |
| CTTCTTGATAAGGAACATGA+TGG | 0.481769 | 1.4:-80457052 | None:intergenic |
| TTCAACATCAACAAAATGAT+AGG | 0.482896 | 1.4:-80453501 | None:intergenic |
| ACCGTCCAGTAACTCTTCCT+TGG | 0.484188 | 1.4:-80455729 | None:intergenic |
| ATTTGGGCACGGCCTATTGA+AGG | 0.485547 | 1.4:+80453896 | MS.gene26902:CDS |
| CCTATAATAAGTCAGAAAGA+TGG | 0.486412 | 1.4:+80455970 | MS.gene26902:CDS |
| CATCAATGCAAAGTTGCAAA+AGG | 0.489305 | 1.4:+80455683 | MS.gene26902:CDS |
| GGACTTCTGGTAATGTGGCT+TGG | 0.489469 | 1.4:+80454428 | MS.gene26902:CDS |
| TGGAGAGGCTGATATAACTT+TGG | 0.495614 | 1.4:+80455148 | MS.gene26902:CDS |
| TTGGAGATAGAGGGTCTAAA+GGG | 0.500491 | 1.4:-80453415 | None:intergenic |
| TTAACTATTAACAGCTCAGT+TGG | 0.505019 | 1.4:-80455807 | None:intergenic |
| TTTGGCTCTAACAACTACCT+TGG | 0.506905 | 1.4:-80453597 | None:intergenic |
| AATAAGTCAGAAAGATGGGC+TGG | 0.508097 | 1.4:+80455975 | MS.gene26902:CDS |
| GTACCTTCAGCTTTAGGCAT+AGG | 0.508242 | 1.4:-80453983 | None:intergenic |
| AAAAGTGGCAGCATAAAAGT+TGG | 0.511324 | 1.4:+80455230 | MS.gene26902:CDS |
| CTATAATAAGTCAGAAAGAT+GGG | 0.513360 | 1.4:+80455971 | MS.gene26902:CDS |
| AAGGTAGTTGTTAGAGCCAA+AGG | 0.513719 | 1.4:+80453599 | MS.gene26902:CDS |
| GACAAAGTTAGGTAATCAAG+TGG | 0.516354 | 1.4:+80455842 | MS.gene26902:CDS |
| GTTGGAGATAGAGGGTCTAA+AGG | 0.519701 | 1.4:-80453416 | None:intergenic |
| TGAGAGGACTTCTGGTAATG+TGG | 0.521014 | 1.4:+80454423 | MS.gene26902:CDS |
| GATAGGAGCCGTGGAGATGA+TGG | 0.529443 | 1.4:+80456011 | MS.gene26902:CDS |
| TTAAGTCCACCACTAGCTCA+TGG | 0.529687 | 1.4:-80453628 | None:intergenic |
| AGCTGATAGCTTGCAACCCA+AGG | 0.530584 | 1.4:+80454309 | MS.gene26902:CDS |
| GATTGGGAATTCCTGAAAAG+TGG | 0.539523 | 1.4:+80455215 | MS.gene26902:CDS |
| CTAGTGGTGGACTTAACAAA+AGG | 0.541951 | 1.4:+80453635 | MS.gene26902:CDS |
| CCATACCAACCAATTGTGAA+TGG | 0.543660 | 1.4:-80453812 | None:intergenic |
| TCAAAACCACCCTGAACTGT+TGG | 0.547785 | 1.4:-80457089 | None:intergenic |
| CAACCCAAGGTTGATTGCCA+GGG | 0.550143 | 1.4:+80454322 | MS.gene26902:CDS |
| TAAGTCCACCACTAGCTCAT+GGG | 0.550349 | 1.4:-80453627 | None:intergenic |
| AAGTTACCTCTGGCTCCAAA+CGG | 0.553158 | 1.4:-80456039 | None:intergenic |
| GTAGGGTTTAATGCTAGAGC+AGG | 0.558166 | 1.4:+80454118 | MS.gene26902:CDS |
| GATAAAATCTACAAAGGTCA+CGG | 0.559746 | 1.4:+80453671 | MS.gene26902:CDS |
| ACATGGATCCTACATTAGAA+TGG | 0.559767 | 1.4:+80454239 | MS.gene26902:CDS |
| TAGTATTCCTAGACAAGCCA+AGG | 0.560332 | 1.4:+80453580 | MS.gene26902:CDS |
| AGCTGCCAAGAGGGAAGCTG+AGG | 0.560924 | 1.4:+80455761 | MS.gene26902:CDS |
| TCTAATGTAGGATCCATGTA+AGG | 0.562823 | 1.4:-80454235 | None:intergenic |
| GTACTTTATACTCAAAGCAA+TGG | 0.566274 | 1.4:-80457143 | None:intergenic |
| TTGCATTATCATCAATGTCA+AGG | 0.566643 | 1.4:-80455653 | None:intergenic |
| TTATTTCAGTTGGAGATAGA+GGG | 0.567066 | 1.4:-80453424 | None:intergenic |
| AGAGGCTGATATAACTTTGG+TGG | 0.568953 | 1.4:+80455151 | MS.gene26902:CDS |
| TCTACAGATAAGAGATGGAG+AGG | 0.570899 | 1.4:+80455133 | MS.gene26902:intron |
| ATAGTTCAACAATCTTACCT+TGG | 0.573038 | 1.4:+80453461 | MS.gene26902:CDS |
| CCATATACACTGCATTTCCC+TGG | 0.573734 | 1.4:-80454339 | None:intergenic |
| GTGAGGTGCAACAAGTGCCA+AGG | 0.576154 | 1.4:+80454386 | MS.gene26902:CDS |
| ATAGTGCTGTGGCACACAGT+TGG | 0.581553 | 1.4:+80457026 | MS.gene26902:CDS |
| GTGTACCATTCACAATTGGT+TGG | 0.582500 | 1.4:+80453807 | MS.gene26902:CDS |
| AGTCAGAAAGATGGGCTGGA+GGG | 0.585305 | 1.4:+80455979 | MS.gene26902:CDS |
| ACAACTACCTTGGCTTGTCT+AGG | 0.585547 | 1.4:-80453587 | None:intergenic |
| GTGATCATGATAATCAGCTA+TGG | 0.588908 | 1.4:-80455610 | None:intergenic |
| TTCTATGCTGATAGGAGCCG+TGG | 0.589255 | 1.4:+80456002 | MS.gene26902:CDS |
| GGTCAAGATAATATGTTACA+AGG | 0.594480 | 1.4:-80455632 | None:intergenic |
| AAAGAGTCAATTGCCAAAAG+GGG | 0.595022 | 1.4:+80453761 | MS.gene26902:CDS |
| AAAACATGACCATAGCATCA+AGG | 0.597001 | 1.4:+80453309 | None:intergenic |
| GATAGAGGGTCTAAAGGGTG+AGG | 0.598787 | 1.4:-80453410 | None:intergenic |
| TATAGGAGAGTGATGTATAG+GGG | 0.599318 | 1.4:+80454190 | MS.gene26902:CDS |
| TTGCAAAAGGTCAAAGCAAG+TGG | 0.608603 | 1.4:+80455696 | MS.gene26902:CDS |
| AGGTGAAACCCATGAGCTAG+TGG | 0.611197 | 1.4:+80453619 | MS.gene26902:CDS |
| AATAAAAGAAGCTGCCAAGA+GGG | 0.611661 | 1.4:+80455752 | MS.gene26902:CDS |
| GGAAATGCAGTGTATATGGA+TGG | 0.614117 | 1.4:+80454343 | MS.gene26902:CDS |
| GCTCAATGAATGTAAACGGA+GGG | 0.614184 | 1.4:-80453697 | None:intergenic |
| GGTCAGAATGATTGCTACTG+TGG | 0.615858 | 1.4:+80455172 | MS.gene26902:CDS |
| GTACCTATGCCTAAAGCTGA+AGG | 0.627064 | 1.4:+80453980 | MS.gene26902:CDS |
| TAATGTGGCTTGGAGACACA+TGG | 0.627138 | 1.4:+80454438 | MS.gene26902:CDS |
| AAGTGGCAGCATAAAAGTTG+GGG | 0.627330 | 1.4:+80455232 | MS.gene26902:CDS |
| GCTTAGCCGTTTGGAGCCAG+AGG | 0.628223 | 1.4:+80456033 | MS.gene26902:CDS |
| AATCAGTAAATATTTGGGCA+CGG | 0.629929 | 1.4:+80453885 | MS.gene26902:CDS |
| GTCAGAATGATTGCTACTGT+GGG | 0.632702 | 1.4:+80455173 | MS.gene26902:CDS |
| AAGTCAGAAAGATGGGCTGG+AGG | 0.632809 | 1.4:+80455978 | MS.gene26902:CDS |
| GCTGAGGCTAGAATTAGGCT+CGG | 0.634518 | 1.4:+80455777 | MS.gene26902:CDS |
| AGCTCAATGAATGTAAACGG+AGG | 0.644081 | 1.4:-80453698 | None:intergenic |
| TGAGGTGCAACAAGTGCCAA+GGG | 0.646795 | 1.4:+80454387 | MS.gene26902:CDS |
| TATGGCGGGTCCTAATGGTG+AGG | 0.651158 | 1.4:+80454369 | MS.gene26902:CDS |
| TAATAAAAGAAGCTGCCAAG+AGG | 0.654704 | 1.4:+80455751 | MS.gene26902:CDS |
| GTATCAGATAAAATCTACAA+AGG | 0.657648 | 1.4:+80453665 | MS.gene26902:CDS |
| TGAAACCCATGAGCTAGTGG+TGG | 0.659649 | 1.4:+80453622 | MS.gene26902:CDS |
| ACAAAGTTAGGTAATCAAGT+GGG | 0.674986 | 1.4:+80455843 | MS.gene26902:CDS |
| ACCAAGGAAGAGTTACTGGA+CGG | 0.675087 | 1.4:+80455728 | MS.gene26902:CDS |
| CGGCTAAGCCATCATCTCCA+CGG | 0.681883 | 1.4:-80456019 | None:intergenic |
| AAAGACCATGAAGTGAAATG+GGG | 0.693342 | 1.4:+80454079 | MS.gene26902:CDS |
| AGAATACAGACATAGTGCTG+TGG | 0.711683 | 1.4:+80457015 | MS.gene26902:CDS |
| TATGTATAATGATAGATACA+GGG | 0.716158 | 1.4:+80453958 | MS.gene26902:CDS |
| TAATATTAGGAATAGCACCA+AGG | 0.730567 | 1.4:-80453478 | None:intergenic |
| CAAGTGGCTTTGGAACACCA+AGG | 0.777920 | 1.4:+80455712 | MS.gene26902:CDS |
| GTAATGCCAACAGTTCAGGG+TGG | 0.794870 | 1.4:+80457083 | MS.gene26902:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAATAAAAAAATT+AGG | + | chr1.4:80456628-80456647 | MS.gene26902:intron | 0.0% |
| !! | AAGTAATAAAAAAAAAATTG+AGG | - | chr1.4:80456759-80456778 | None:intergenic | 10.0% |
| !! | TTTAATAAAAAAATTAGGAA+GGG | + | chr1.4:80456633-80456652 | MS.gene26902:intron | 10.0% |
| !!! | ATATATAAATCTACAATTTT+TGG | - | chr1.4:80456286-80456305 | None:intergenic | 10.0% |
| !!! | TCAATATTTTTTTTAAATTG+GGG | + | chr1.4:80456601-80456620 | MS.gene26902:intron | 10.0% |
| !!! | TTTTAATAAAAAAATTAGGA+AGG | + | chr1.4:80456632-80456651 | MS.gene26902:intron | 10.0% |
| !! | AAAAAAAAAGTCCTATAAAA+AGG | + | chr1.4:80454723-80454742 | MS.gene26902:intron | 15.0% |
| !! | AATAATATCTATAGTAAAAG+TGG | - | chr1.4:80456156-80456175 | None:intergenic | 15.0% |
| !! | AATTTACTATTCAATTACAA+AGG | + | chr1.4:80455379-80455398 | MS.gene26902:intron | 15.0% |
| !! | CTCAAAATTGTATAAATATA+TGG | + | chr1.4:80456226-80456245 | MS.gene26902:intron | 15.0% |
| !! | TATAAATGCTCTTATATTTA+GGG | + | chr1.4:80454759-80454778 | MS.gene26902:intron | 15.0% |
| !! | TTAATAAAAAAATTAGGAAG+GGG | + | chr1.4:80456634-80456653 | MS.gene26902:intron | 15.0% |
| !!! | ACTTTTACTATAGATATTAT+TGG | + | chr1.4:80456155-80456174 | MS.gene26902:intron | 15.0% |
| !!! | ATAAAACAATTTAGGATATT+AGG | - | chr1.4:80455487-80455506 | None:intergenic | 15.0% |
| !! | AAAAAAATATGTTGTCTTCT+TGG | + | chr1.4:80456897-80456916 | MS.gene26902:intron | 20.0% |
| !! | AATCATATATTTATAGACGA+AGG | - | chr1.4:80454519-80454538 | None:intergenic | 20.0% |
| !! | ACAAAATGATAGGTAATATT+AGG | - | chr1.4:80453494-80453513 | None:intergenic | 20.0% |
| !! | ACATGTAACATATCAAATAT+TGG | + | chr1.4:80454046-80454065 | MS.gene26902:CDS | 20.0% |
| !! | ACTATAGATATTATTGGAAT+GGG | + | chr1.4:80456161-80456180 | MS.gene26902:intron | 20.0% |
| !! | ATCATATATTTATAGACGAA+GGG | - | chr1.4:80454518-80454537 | None:intergenic | 20.0% |
| !! | ATGTTAAATTGATTGACAAT+TGG | + | chr1.4:80454581-80454600 | MS.gene26902:intron | 20.0% |
| !! | ATTATATGGACTTATTTCAA+TGG | + | chr1.4:80456460-80456479 | MS.gene26902:intron | 20.0% |
| !! | CCAAAGTAATATAAATTCTA+AGG | - | chr1.4:80455320-80455339 | None:intergenic | 20.0% |
| !! | CCTTAGAATTTATATTACTT+TGG | + | chr1.4:80455317-80455336 | MS.gene26902:intron | 20.0% |
| !! | CTATAAATGCTCTTATATTT+AGG | + | chr1.4:80454758-80454777 | MS.gene26902:intron | 20.0% |
| !! | GAAAAAAAAAAAGAAATCCA+AGG | - | chr1.4:80455285-80455304 | None:intergenic | 20.0% |
| !! | GATAAGTTCTACATATTATA+TGG | + | chr1.4:80456446-80456465 | MS.gene26902:intron | 20.0% |
| !! | TAATAAAAAAATTAGGAAGG+GGG | + | chr1.4:80456635-80456654 | MS.gene26902:intron | 20.0% |
| !! | TACTATAGATATTATTGGAA+TGG | + | chr1.4:80456160-80456179 | MS.gene26902:intron | 20.0% |
| !! | TATGGTAATTCTACTTAATT+AGG | + | chr1.4:80456792-80456811 | MS.gene26902:intron | 20.0% |
| !! | TATGTATAATGATAGATACA+GGG | + | chr1.4:80453958-80453977 | MS.gene26902:CDS | 20.0% |
| !! | TTATGTATAATGATAGATAC+AGG | + | chr1.4:80453957-80453976 | MS.gene26902:CDS | 20.0% |
| !!! | AAAAAAAAAATTGAGGTGTT+AGG | - | chr1.4:80456752-80456771 | None:intergenic | 20.0% |
| !!! | AACTTTTGTTTTTACTTTAG+TGG | + | chr1.4:80456057-80456076 | MS.gene26902:intron | 20.0% |
| !!! | AATTTTCAATCTTCAAGTAA+AGG | + | chr1.4:80454007-80454026 | MS.gene26902:CDS | 20.0% |
| !!! | ACAATTGGTATTATTTTATC+AGG | + | chr1.4:80454596-80454615 | MS.gene26902:intron | 20.0% |
| !!! | ATTTTACAAATATTTTGGAG+AGG | + | chr1.4:80456690-80456709 | MS.gene26902:intron | 20.0% |
| !!! | ATTTTCAATCTTCAAGTAAA+GGG | + | chr1.4:80454008-80454027 | MS.gene26902:CDS | 20.0% |
| !!! | CTAAATATAAGAGCATTTAT+AGG | - | chr1.4:80454760-80454779 | None:intergenic | 20.0% |
| !!! | CTTATTTTTGTAAACTCTTT+AGG | + | chr1.4:80454954-80454973 | MS.gene26902:intron | 20.0% |
| !!! | GGAAATTTTATTAATTCAAG+TGG | + | chr1.4:80456656-80456675 | MS.gene26902:intron | 20.0% |
| !!! | TACTTCAATTTTCATCTTTA+TGG | + | chr1.4:80456774-80456793 | MS.gene26902:intron | 20.0% |
| !!! | TCATGTTTTCATAGTAATAT+TGG | + | chr1.4:80454645-80454664 | MS.gene26902:intron | 20.0% |
| !!! | TGGTCATTTTACAAATATTT+TGG | + | chr1.4:80456685-80456704 | MS.gene26902:intron | 20.0% |
| !!! | TTGAAGCTATTTGAAATATA+TGG | + | chr1.4:80454805-80454824 | MS.gene26902:intron | 20.0% |
| !!! | TTGAATTTTGAATATGTAAG+AGG | - | chr1.4:80453743-80453762 | None:intergenic | 20.0% |
| !!! | TTTATCATTTTGCTATTGTA+AGG | - | chr1.4:80455417-80455436 | None:intergenic | 20.0% |
| !!! | TTTTTCTAGATCCTTTTTAT+AGG | - | chr1.4:80454737-80454756 | None:intergenic | 20.0% |
| ! | AAAAGCTCAATGAATGTAAA+CGG | - | chr1.4:80453704-80453723 | None:intergenic | 25.0% |
| ! | ACCTATGCATAAAACAATTT+AGG | - | chr1.4:80455495-80455514 | None:intergenic | 25.0% |
| ! | ACTACGATTATATTCTTGAT+TGG | + | chr1.4:80455198-80455217 | MS.gene26902:CDS | 25.0% |
| ! | CATCTTTCTGACTTATTATA+GGG | - | chr1.4:80455972-80455991 | None:intergenic | 25.0% |
| ! | CTAAAATACCATTCTAATGT+AGG | - | chr1.4:80454250-80454269 | None:intergenic | 25.0% |
| ! | CTAACTTTGTCAGTTTATTA+GGG | - | chr1.4:80455833-80455852 | None:intergenic | 25.0% |
| ! | CTACGATTATATTCTTGATT+GGG | + | chr1.4:80455199-80455218 | MS.gene26902:CDS | 25.0% |
| ! | CTATAATAAGTCAGAAAGAT+GGG | + | chr1.4:80455971-80455990 | MS.gene26902:CDS | 25.0% |
| ! | GCTTATTATTTAACCAAACA+GGG | + | chr1.4:80455070-80455089 | MS.gene26902:intron | 25.0% |
| ! | GGATGAATCAGTAAATATTT+GGG | + | chr1.4:80453880-80453899 | MS.gene26902:CDS | 25.0% |
| ! | GTATCAGATAAAATCTACAA+AGG | + | chr1.4:80453665-80453684 | MS.gene26902:CDS | 25.0% |
| ! | TCTATAGTAAAAGTGGTATA+CGG | - | chr1.4:80456149-80456168 | None:intergenic | 25.0% |
| ! | TGCTTATTATTTAACCAAAC+AGG | + | chr1.4:80455069-80455088 | MS.gene26902:intron | 25.0% |
| ! | TTCAACATCAACAAAATGAT+AGG | - | chr1.4:80453504-80453523 | None:intergenic | 25.0% |
| ! | TTTATTACCGAACTTTGAAT+TGG | + | chr1.4:80456970-80456989 | MS.gene26902:intron | 25.0% |
| !! | ATCAGGTTTTCTATTTAGAA+GGG | + | chr1.4:80454613-80454632 | MS.gene26902:intron | 25.0% |
| !! | CAAATGCTCTTTCTTTTATT+TGG | - | chr1.4:80455569-80455588 | None:intergenic | 25.0% |
| !! | CTACATTAGAATGGTATTTT+AGG | + | chr1.4:80454248-80454267 | MS.gene26902:CDS | 25.0% |
| !! | TAATATTGGTTACATGTTGT+AGG | + | chr1.4:80454659-80454678 | MS.gene26902:intron | 25.0% |
| !! | TATCAGGTTTTCTATTTAGA+AGG | + | chr1.4:80454612-80454631 | MS.gene26902:intron | 25.0% |
| !!! | ATACAAAAAAGTATCAAGTG+TGG | + | chr1.4:80455940-80455959 | MS.gene26902:CDS | 25.0% |
| !!! | ATGGTATTTTAGGACTTTTA+TGG | + | chr1.4:80454258-80454277 | MS.gene26902:CDS | 25.0% |
| !!! | ATTTGGTTTTTATGTGTGTA+TGG | - | chr1.4:80455552-80455571 | None:intergenic | 25.0% |
| !!! | CAAATAAAAGAAAGAGCATT+TGG | + | chr1.4:80455567-80455586 | MS.gene26902:CDS | 25.0% |
| !!! | CTTGTTTTGTTTATTTCAGT+TGG | - | chr1.4:80453437-80453456 | None:intergenic | 25.0% |
| !!! | TAAATTGTTTTATGCATAGG+TGG | + | chr1.4:80455494-80455513 | MS.gene26902:intron | 25.0% |
| !!! | TACAAAAAAGTATCAAGTGT+GGG | + | chr1.4:80455941-80455960 | MS.gene26902:CDS | 25.0% |
| !!! | TCCTAAATTGTTTTATGCAT+AGG | + | chr1.4:80455491-80455510 | MS.gene26902:intron | 25.0% |
| !!! | TTTAGGACATTGTTTTTGTT+TGG | - | chr1.4:80453530-80453549 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTATGTGTGTAT+GGG | - | chr1.4:80455551-80455570 | None:intergenic | 25.0% |
| !!! | TTTTTTCTACAGATAAGAGA+TGG | + | chr1.4:80455128-80455147 | MS.gene26902:intron | 25.0% |
| AAAAGACCATGAAGTGAAAT+GGG | + | chr1.4:80454078-80454097 | MS.gene26902:CDS | 30.0% | |
| AAATTTGTACCTTCAGCTTT+AGG | - | chr1.4:80453992-80454011 | None:intergenic | 30.0% | |
| AACATATATACTAGTCAGGT+AGG | - | chr1.4:80455345-80455364 | None:intergenic | 30.0% | |
| AATATAGGAGAGTGATGTAT+AGG | + | chr1.4:80454188-80454207 | MS.gene26902:CDS | 30.0% | |
| AATCAACAATCCCACAAAAT+TGG | + | chr1.4:80454462-80454481 | MS.gene26902:CDS | 30.0% | |
| AATCAGTAAATATTTGGGCA+CGG | + | chr1.4:80453885-80453904 | MS.gene26902:CDS | 30.0% | |
| AATCCAAGGTAAAATAGTTG+TGG | - | chr1.4:80455271-80455290 | None:intergenic | 30.0% | |
| ACAAAAACAATGTCCTAAAG+TGG | + | chr1.4:80453531-80453550 | MS.gene26902:CDS | 30.0% | |
| ACAAAGTTAGGTAATCAAGT+GGG | + | chr1.4:80455843-80455862 | MS.gene26902:CDS | 30.0% | |
| ACTGGAAAATCTTCTTGATA+AGG | - | chr1.4:80457065-80457084 | None:intergenic | 30.0% | |
| AGTAATGTGATTCCTTCAAT+AGG | - | chr1.4:80453911-80453930 | None:intergenic | 30.0% | |
| ATAGTTCAACAATCTTACCT+TGG | + | chr1.4:80453461-80453480 | MS.gene26902:CDS | 30.0% | |
| ATATAGGAGAGTGATGTATA+GGG | + | chr1.4:80454189-80454208 | MS.gene26902:CDS | 30.0% | |
| ATTAATTCAAGTGGCAATGA+TGG | + | chr1.4:80456665-80456684 | MS.gene26902:intron | 30.0% | |
| CAACAACATATATACTAGTC+AGG | - | chr1.4:80455349-80455368 | None:intergenic | 30.0% | |
| CCATCTTTCTGACTTATTAT+AGG | - | chr1.4:80455973-80455992 | None:intergenic | 30.0% | |
| CCTAACTTTGTCAGTTTATT+AGG | - | chr1.4:80455834-80455853 | None:intergenic | 30.0% | |
| CCTAATAAACTGACAAAGTT+AGG | + | chr1.4:80455831-80455850 | MS.gene26902:CDS | 30.0% | |
| CCTATAATAAGTCAGAAAGA+TGG | + | chr1.4:80455970-80455989 | MS.gene26902:CDS | 30.0% | |
| CTCTTATATTTAGGGATGAA+GGG | + | chr1.4:80454767-80454786 | MS.gene26902:intron | 30.0% | |
| CTTATCTATTAGCATAGCAT+AGG | + | chr1.4:80454868-80454887 | MS.gene26902:intron | 30.0% | |
| GATAAAATCTACAAAGGTCA+CGG | + | chr1.4:80453671-80453690 | MS.gene26902:CDS | 30.0% | |
| GGGATGAATCAGTAAATATT+TGG | + | chr1.4:80453879-80453898 | MS.gene26902:CDS | 30.0% | |
| GGTCAAGATAATATGTTACA+AGG | - | chr1.4:80455635-80455654 | None:intergenic | 30.0% | |
| GTAAAAACAAAAGTTACCTC+TGG | - | chr1.4:80456052-80456071 | None:intergenic | 30.0% | |
| TAAAAGACCATGAAGTGAAA+TGG | + | chr1.4:80454077-80454096 | MS.gene26902:CDS | 30.0% | |
| TAATATTAGGAATAGCACCA+AGG | - | chr1.4:80453481-80453500 | None:intergenic | 30.0% | |
| TATTTGCACTTAGAGACATT+TGG | + | chr1.4:80454830-80454849 | MS.gene26902:intron | 30.0% | |
| TGTTTGTCCAATTCAAAGTT+CGG | - | chr1.4:80456980-80456999 | None:intergenic | 30.0% | |
| TTAACTATTAACAGCTCAGT+TGG | - | chr1.4:80455810-80455829 | None:intergenic | 30.0% | |
| TTATTTCAGTTGGAGATAGA+GGG | - | chr1.4:80453427-80453446 | None:intergenic | 30.0% | |
| TTGCATTATCATCAATGTCA+AGG | - | chr1.4:80455656-80455675 | None:intergenic | 30.0% | |
| TTTATCAAACCTTGATGCTA+TGG | - | chr1.4:80453321-80453340 | None:intergenic | 30.0% | |
| TTTATTTCAGTTGGAGATAG+AGG | - | chr1.4:80453428-80453447 | None:intergenic | 30.0% | |
| ! | ATAGAAGCATGACACTTTAA+GGG | - | chr1.4:80453858-80453877 | None:intergenic | 30.0% |
| ! | GTTACATGTAGCAACTATTT+TGG | - | chr1.4:80454035-80454054 | None:intergenic | 30.0% |
| ! | TAAAGTGTCATGCTTCTATA+GGG | + | chr1.4:80453859-80453878 | MS.gene26902:CDS | 30.0% |
| ! | TATAGAAGCATGACACTTTA+AGG | - | chr1.4:80453859-80453878 | None:intergenic | 30.0% |
| ! | TTAAAGTGTCATGCTTCTAT+AGG | + | chr1.4:80453858-80453877 | MS.gene26902:CDS | 30.0% |
| ! | TTAGGACTTTTATGGATGTT+GGG | + | chr1.4:80454266-80454285 | MS.gene26902:CDS | 30.0% |
| ! | TTTCACTTCATGGTCTTTTA+TGG | - | chr1.4:80454077-80454096 | None:intergenic | 30.0% |
| !! | AGTGTATATGGATGGTTTTA+TGG | + | chr1.4:80454351-80454370 | MS.gene26902:CDS | 30.0% |
| !! | TTTAGGACTTTTATGGATGT+TGG | + | chr1.4:80454265-80454284 | MS.gene26902:CDS | 30.0% |
| !!! | GGTCTTAAGTTGTTTTTCTT+TGG | + | chr1.4:80455091-80455110 | MS.gene26902:intron | 30.0% |
| AAAAGTGGCAGCATAAAAGT+TGG | + | chr1.4:80455230-80455249 | MS.gene26902:CDS | 35.0% | |
| AAACAACTTAAGACCCTGTT+TGG | - | chr1.4:80455086-80455105 | None:intergenic | 35.0% | |
| AAAGACCATGAAGTGAAATG+GGG | + | chr1.4:80454079-80454098 | MS.gene26902:CDS | 35.0% | |
| AAAGAGTCAATTGCCAAAAG+GGG | + | chr1.4:80453761-80453780 | MS.gene26902:CDS | 35.0% | |
| AAAGTGGCAGCATAAAAGTT+GGG | + | chr1.4:80455231-80455250 | MS.gene26902:CDS | 35.0% | |
| AACTAGACATTGTGCAATCA+TGG | - | chr1.4:80453351-80453370 | None:intergenic | 35.0% | |
| AATAAAAGAAGCTGCCAAGA+GGG | + | chr1.4:80455752-80455771 | MS.gene26902:CDS | 35.0% | |
| AATTACCCCATTTCACTTCA+TGG | - | chr1.4:80454087-80454106 | None:intergenic | 35.0% | |
| ACAATCCCACAAAATTGGTA+AGG | + | chr1.4:80454467-80454486 | MS.gene26902:intron | 35.0% | |
| ACATGGATCCTACATTAGAA+TGG | + | chr1.4:80454239-80454258 | MS.gene26902:CDS | 35.0% | |
| ATGAAGTGAAATGGGGTAAT+TGG | + | chr1.4:80454086-80454105 | MS.gene26902:CDS | 35.0% | |
| CAAAGAGTCAATTGCCAAAA+GGG | + | chr1.4:80453760-80453779 | MS.gene26902:CDS | 35.0% | |
| CATCAATGCAAAGTTGCAAA+AGG | + | chr1.4:80455683-80455702 | MS.gene26902:CDS | 35.0% | |
| CTTCTTGATAAGGAACATGA+TGG | - | chr1.4:80457055-80457074 | None:intergenic | 35.0% | |
| GAACTTTGAATTGGACAAAC+AGG | + | chr1.4:80456979-80456998 | MS.gene26902:intron | 35.0% | |
| GACAAAGTTAGGTAATCAAG+TGG | + | chr1.4:80455842-80455861 | MS.gene26902:CDS | 35.0% | |
| GCTCTTATATTTAGGGATGA+AGG | + | chr1.4:80454766-80454785 | MS.gene26902:intron | 35.0% | |
| GGTATGGAGAAAAAATCACA+AGG | + | chr1.4:80453828-80453847 | MS.gene26902:CDS | 35.0% | |
| GGTGTTAAGATATGATGTAC+GGG | - | chr1.4:80456128-80456147 | None:intergenic | 35.0% | |
| GTATAAGAAGCTCTTCTTTG+TGG | - | chr1.4:80455924-80455943 | None:intergenic | 35.0% | |
| GTGATCATGATAATCAGCTA+TGG | - | chr1.4:80455613-80455632 | None:intergenic | 35.0% | |
| GTTACATGTTGTAGGTTTGT+TGG | + | chr1.4:80454667-80454686 | MS.gene26902:intron | 35.0% | |
| TAATAAAAGAAGCTGCCAAG+AGG | + | chr1.4:80455751-80455770 | MS.gene26902:CDS | 35.0% | |
| TAGGAACTTACAAGACTTTG+AGG | + | chr1.4:80454887-80454906 | MS.gene26902:intron | 35.0% | |
| TAGTAGATGACAACCACTTT+AGG | - | chr1.4:80453547-80453566 | None:intergenic | 35.0% | |
| TATAGGAGAGTGATGTATAG+GGG | + | chr1.4:80454190-80454209 | MS.gene26902:CDS | 35.0% | |
| TCAAAAATGCAAATAGCCCT+TGG | - | chr1.4:80454406-80454425 | None:intergenic | 35.0% | |
| TCAAAGAGTCAATTGCCAAA+AGG | + | chr1.4:80453759-80453778 | MS.gene26902:CDS | 35.0% | |
| TCATCCAACAAAGAAGTAAC+CGG | - | chr1.4:80455891-80455910 | None:intergenic | 35.0% | |
| TCTAATGTAGGATCCATGTA+AGG | - | chr1.4:80454238-80454257 | None:intergenic | 35.0% | |
| TCTTGTGTACCATTCACAAT+TGG | + | chr1.4:80453803-80453822 | MS.gene26902:CDS | 35.0% | |
| TGAAGTGAAATGGGGTAATT+GGG | + | chr1.4:80454087-80454106 | MS.gene26902:CDS | 35.0% | |
| TGAGACATTTGTTCCTTACA+TGG | + | chr1.4:80454222-80454241 | MS.gene26902:CDS | 35.0% | |
| TTGCTTTCGAAAAAGTTAGC+TGG | - | chr1.4:80457122-80457141 | None:intergenic | 35.0% | |
| TTTATGGATGTTGGGGAATT+TGG | + | chr1.4:80454274-80454293 | MS.gene26902:CDS | 35.0% | |
| ! | ACAAGACTTTGAGGAGTTTA+TGG | + | chr1.4:80454896-80454915 | MS.gene26902:intron | 35.0% |
| ! | AGACAAATATAAGCCCCTTT+TGG | - | chr1.4:80453777-80453796 | None:intergenic | 35.0% |
| ! | ATGACACCTTACCAATTTTG+TGG | - | chr1.4:80454476-80454495 | None:intergenic | 35.0% |
| ! | CGGTGTTAAGATATGATGTA+CGG | - | chr1.4:80456129-80456148 | None:intergenic | 35.0% |
| ! | GTAATTGGGCTTTTCATGTA+GGG | + | chr1.4:80454101-80454120 | MS.gene26902:CDS | 35.0% |
| ! | GTACCACAACTATTTTACCT+TGG | + | chr1.4:80455265-80455284 | MS.gene26902:intron | 35.0% |
| ! | TAGGACTTTTATGGATGTTG+GGG | + | chr1.4:80454267-80454286 | MS.gene26902:CDS | 35.0% |
| ! | TATGGTATTTTCTGCCACTA+AGG | - | chr1.4:80455595-80455614 | None:intergenic | 35.0% |
| ! | TGACACCTTACCAATTTTGT+GGG | - | chr1.4:80454475-80454494 | None:intergenic | 35.0% |
| !!! | GTATATGGATGGTTTTATGG+CGG | + | chr1.4:80454354-80454373 | MS.gene26902:CDS | 35.0% |
| !!! | TATATGGATGGTTTTATGGC+GGG | + | chr1.4:80454355-80454374 | MS.gene26902:CDS | 35.0% |
| AAGGTAGTTGTTAGAGCCAA+AGG | + | chr1.4:80453599-80453618 | MS.gene26902:CDS | 40.0% | |
| AAGTGGCAGCATAAAAGTTG+GGG | + | chr1.4:80455232-80455251 | MS.gene26902:CDS | 40.0% | |
| AATAAGTCAGAAAGATGGGC+TGG | + | chr1.4:80455975-80455994 | MS.gene26902:CDS | 40.0% | |
| ACAACCGGTTACTTCTTTGT+TGG | + | chr1.4:80455884-80455903 | MS.gene26902:CDS | 40.0% | |
| AGAATACAGACATAGTGCTG+TGG | + | chr1.4:80457015-80457034 | MS.gene26902:CDS | 40.0% | |
| AGAGGCTGATATAACTTTGG+TGG | + | chr1.4:80455151-80455170 | MS.gene26902:CDS | 40.0% | |
| AGCTCAATGAATGTAAACGG+AGG | - | chr1.4:80453701-80453720 | None:intergenic | 40.0% | |
| CCATACCAACCAATTGTGAA+TGG | - | chr1.4:80453815-80453834 | None:intergenic | 40.0% | |
| GATTGGGAATTCCTGAAAAG+TGG | + | chr1.4:80455215-80455234 | MS.gene26902:CDS | 40.0% | |
| GCTCAATGAATGTAAACGGA+GGG | - | chr1.4:80453700-80453719 | None:intergenic | 40.0% | |
| GGAAATGCAGTGTATATGGA+TGG | + | chr1.4:80454343-80454362 | MS.gene26902:CDS | 40.0% | |
| GTCAGAATGATTGCTACTGT+GGG | + | chr1.4:80455173-80455192 | MS.gene26902:CDS | 40.0% | |
| GTGTACCATTCACAATTGGT+TGG | + | chr1.4:80453807-80453826 | MS.gene26902:CDS | 40.0% | |
| TAGTATTCCTAGACAAGCCA+AGG | + | chr1.4:80453580-80453599 | MS.gene26902:CDS | 40.0% | |
| TCTACAGATAAGAGATGGAG+AGG | + | chr1.4:80455133-80455152 | MS.gene26902:intron | 40.0% | |
| TGGAGAGGCTGATATAACTT+TGG | + | chr1.4:80455148-80455167 | MS.gene26902:CDS | 40.0% | |
| TTGCAAAAGGTCAAAGCAAG+TGG | + | chr1.4:80455696-80455715 | MS.gene26902:CDS | 40.0% | |
| TTGGAGATAGAGGGTCTAAA+GGG | - | chr1.4:80453418-80453437 | None:intergenic | 40.0% | |
| ! | CCATTCACAATTGGTTGGTA+TGG | + | chr1.4:80453812-80453831 | MS.gene26902:CDS | 40.0% |
| ! | GGTAATTGGGCTTTTCATGT+AGG | + | chr1.4:80454100-80454119 | MS.gene26902:CDS | 40.0% |
| !! | AAGAGCATTTGGAACCTTAG+TGG | + | chr1.4:80455578-80455597 | MS.gene26902:CDS | 40.0% |
| !! | CTAGTGGTGGACTTAACAAA+AGG | + | chr1.4:80453635-80453654 | MS.gene26902:CDS | 40.0% |
| !! | GATGTTGGGGAATTTGGTTT+TGG | + | chr1.4:80454280-80454299 | MS.gene26902:CDS | 40.0% |
| !! | GGGCTATTTGCATTTTTGAG+AGG | + | chr1.4:80454407-80454426 | MS.gene26902:CDS | 40.0% |
| !! | TAGGTAATCAAGTGGGTTAC+CGG | + | chr1.4:80455850-80455869 | MS.gene26902:CDS | 40.0% |
| !! | TGCATTTTTGAGAGGACTTC+TGG | + | chr1.4:80454415-80454434 | MS.gene26902:CDS | 40.0% |
| !! | TTGGCTTGTCTAGGAATACT+AGG | - | chr1.4:80453581-80453600 | None:intergenic | 40.0% |
| !! | TTTGGCTCTAACAACTACCT+TGG | - | chr1.4:80453600-80453619 | None:intergenic | 40.0% |
| !!! | CTTTTATGCTGCCACTTTTC+AGG | - | chr1.4:80455229-80455248 | None:intergenic | 40.0% |
| AAGGTCAAAGCAAGTGGCTT+TGG | + | chr1.4:80455702-80455721 | MS.gene26902:CDS | 45.0% | |
| ACCAAGGAAGAGTTACTGGA+CGG | + | chr1.4:80455728-80455747 | MS.gene26902:CDS | 45.0% | |
| ATTTCCCTGGCAATCAACCT+TGG | - | chr1.4:80454329-80454348 | None:intergenic | 45.0% | |
| CCAGGGAAATGCAGTGTATA+TGG | + | chr1.4:80454339-80454358 | MS.gene26902:CDS | 45.0% | |
| CCAGTAATGCCAACAGTTCA+GGG | + | chr1.4:80457080-80457099 | MS.gene26902:CDS | 45.0% | |
| CCATATACACTGCATTTCCC+TGG | - | chr1.4:80454342-80454361 | None:intergenic | 45.0% | |
| GAACACCAAGGAAGAGTTAC+TGG | + | chr1.4:80455724-80455743 | MS.gene26902:CDS | 45.0% | |
| GGTCAGAATGATTGCTACTG+TGG | + | chr1.4:80455172-80455191 | MS.gene26902:CDS | 45.0% | |
| GTACCTATGCCTAAAGCTGA+AGG | + | chr1.4:80453980-80453999 | MS.gene26902:CDS | 45.0% | |
| GTAGGGTTTAATGCTAGAGC+AGG | + | chr1.4:80454118-80454137 | MS.gene26902:CDS | 45.0% | |
| GTTGGAGATAGAGGGTCTAA+AGG | - | chr1.4:80453419-80453438 | None:intergenic | 45.0% | |
| TAAGTCCACCACTAGCTCAT+GGG | - | chr1.4:80453630-80453649 | None:intergenic | 45.0% | |
| TAGCTCATGGGTTTCACCTT+TGG | - | chr1.4:80453618-80453637 | None:intergenic | 45.0% | |
| TCAAAACCACCCTGAACTGT+TGG | - | chr1.4:80457092-80457111 | None:intergenic | 45.0% | |
| TCCAGTAATGCCAACAGTTC+AGG | + | chr1.4:80457079-80457098 | MS.gene26902:CDS | 45.0% | |
| TTAAGTCCACCACTAGCTCA+TGG | - | chr1.4:80453631-80453650 | None:intergenic | 45.0% | |
| TTTCCCTGGCAATCAACCTT+GGG | - | chr1.4:80454328-80454347 | None:intergenic | 45.0% | |
| ! | AAGTTACCTCTGGCTCCAAA+CGG | - | chr1.4:80456042-80456061 | None:intergenic | 45.0% |
| ! | ACTTGTTGCACCTCACCATT+AGG | - | chr1.4:80454382-80454401 | None:intergenic | 45.0% |
| ! | TAATGTGGCTTGGAGACACA+TGG | + | chr1.4:80454438-80454457 | MS.gene26902:CDS | 45.0% |
| ! | TGAGAGGACTTCTGGTAATG+TGG | + | chr1.4:80454423-80454442 | MS.gene26902:CDS | 45.0% |
| !! | ACAACTACCTTGGCTTGTCT+AGG | - | chr1.4:80453590-80453609 | None:intergenic | 45.0% |
| !! | GTACCTTCAGCTTTAGGCAT+AGG | - | chr1.4:80453986-80454005 | None:intergenic | 45.0% |
| !! | TATGCATAGGTGGCTCTAAC+AGG | + | chr1.4:80455504-80455523 | MS.gene26902:intron | 45.0% |
| !!! | TTCAGGGTGGTTTTGAACTC+AGG | + | chr1.4:80457096-80457115 | MS.gene26902:CDS | 45.0% |
| !! | ATAAAAAACAAAAAAAATAT+AGG | + | chr1.4:80454173-80454192 | MS.gene26902:CDS | 5.0% |
| !!! | ATCAATATTTTTTTTAAATT+GGG | + | chr1.4:80456600-80456619 | MS.gene26902:intron | 5.0% |
| !!! | TAAAAAATATTTCTTTAAAA+AGG | + | chr1.4:80456255-80456274 | MS.gene26902:intron | 5.0% |
| !!! | TATCAATATTTTTTTTAAAT+TGG | + | chr1.4:80456599-80456618 | MS.gene26902:intron | 5.0% |
| ACCGTCCAGTAACTCTTCCT+TGG | - | chr1.4:80455732-80455751 | None:intergenic | 50.0% | |
| AGGTGAAACCCATGAGCTAG+TGG | + | chr1.4:80453619-80453638 | MS.gene26902:CDS | 50.0% | |
| ATAGTGCTGTGGCACACAGT+TGG | + | chr1.4:80457026-80457045 | MS.gene26902:CDS | 50.0% | |
| ATTTGGGCACGGCCTATTGA+AGG | + | chr1.4:80453896-80453915 | MS.gene26902:CDS | 50.0% | |
| CCCTGAACTGTTGGCATTAC+TGG | - | chr1.4:80457083-80457102 | None:intergenic | 50.0% | |
| CCGGTTGTCCACTAATCAAC+CGG | - | chr1.4:80455872-80455891 | None:intergenic | 50.0% | |
| CTGGAGGGTTCTATGCTGAT+AGG | + | chr1.4:80455994-80456013 | MS.gene26902:CDS | 50.0% | |
| GATAGAGGGTCTAAAGGGTG+AGG | - | chr1.4:80453413-80453432 | None:intergenic | 50.0% | |
| GCTGAGGCTAGAATTAGGCT+CGG | + | chr1.4:80455777-80455796 | MS.gene26902:CDS | 50.0% | |
| GGAGAGGATTCGAACGAACT+CGG | + | chr1.4:80456706-80456725 | MS.gene26902:intron | 50.0% | |
| GGGAAGCTGAGGCTAGAATT+AGG | + | chr1.4:80455772-80455791 | MS.gene26902:CDS | 50.0% | |
| GTAATGCCAACAGTTCAGGG+TGG | + | chr1.4:80457083-80457102 | MS.gene26902:CDS | 50.0% | |
| TGAAACCCATGAGCTAGTGG+TGG | + | chr1.4:80453622-80453641 | MS.gene26902:CDS | 50.0% | |
| TGAGGTGCAACAAGTGCCAA+GGG | + | chr1.4:80454387-80454406 | MS.gene26902:CDS | 50.0% | |
| TTCTATGCTGATAGGAGCCG+TGG | + | chr1.4:80456002-80456021 | MS.gene26902:CDS | 50.0% | |
| ! | AGCTGATAGCTTGCAACCCA+AGG | + | chr1.4:80454309-80454328 | MS.gene26902:CDS | 50.0% |
| ! | CAACCCAAGGTTGATTGCCA+GGG | + | chr1.4:80454322-80454341 | MS.gene26902:CDS | 50.0% |
| ! | CCGGTTGATTAGTGGACAAC+CGG | + | chr1.4:80455869-80455888 | MS.gene26902:CDS | 50.0% |
| ! | GAGATGATGGCTTAGCCGTT+TGG | + | chr1.4:80456024-80456043 | MS.gene26902:CDS | 50.0% |
| ! | GGACTTCTGGTAATGTGGCT+TGG | + | chr1.4:80454428-80454447 | MS.gene26902:CDS | 50.0% |
| ! | GTGGGTTACCGGTTGATTAG+TGG | + | chr1.4:80455861-80455880 | MS.gene26902:CDS | 50.0% |
| !! | AAGTCAGAAAGATGGGCTGG+AGG | + | chr1.4:80455978-80455997 | MS.gene26902:CDS | 50.0% |
| !! | AGTCAGAAAGATGGGCTGGA+GGG | + | chr1.4:80455979-80455998 | MS.gene26902:CDS | 50.0% |
| !! | CAAGTGGCTTTGGAACACCA+AGG | + | chr1.4:80455712-80455731 | MS.gene26902:CDS | 50.0% |
| !!! | GGTTTTATGGCGGGTCCTAA+TGG | + | chr1.4:80454364-80454383 | MS.gene26902:CDS | 50.0% |
| CGGCTAAGCCATCATCTCCA+CGG | - | chr1.4:80456022-80456041 | None:intergenic | 55.0% | |
| GATAGGAGCCGTGGAGATGA+TGG | + | chr1.4:80456011-80456030 | MS.gene26902:CDS | 55.0% | |
| GTGAGGTGCAACAAGTGCCA+AGG | + | chr1.4:80454386-80454405 | MS.gene26902:CDS | 55.0% | |
| TCTAGCCTCAGCTTCCCTCT+TGG | - | chr1.4:80455769-80455788 | None:intergenic | 55.0% | |
| ! | GCAACCCAAGGTTGATTGCC+AGG | + | chr1.4:80454321-80454340 | MS.gene26902:CDS | 55.0% |
| !! | TATGGCGGGTCCTAATGGTG+AGG | + | chr1.4:80454369-80454388 | MS.gene26902:CDS | 55.0% |
| AGCTGCCAAGAGGGAAGCTG+AGG | + | chr1.4:80455761-80455780 | MS.gene26902:CDS | 60.0% | |
| ! | GCTTAGCCGTTTGGAGCCAG+AGG | + | chr1.4:80456033-80456052 | MS.gene26902:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 80453314 | 80457154 | 80453314 | ID=MS.gene26902 |
| chr1.4 | mRNA | 80453314 | 80457154 | 80453314 | ID=MS.gene26902.t1;Parent=MS.gene26902 |
| chr1.4 | exon | 80453314 | 80454483 | 80453314 | ID=MS.gene26902.t1.exon1;Parent=MS.gene26902.t1 |
| chr1.4 | CDS | 80453314 | 80454483 | 80453314 | ID=cds.MS.gene26902.t1;Parent=MS.gene26902.t1 |
| chr1.4 | exon | 80455140 | 80455253 | 80455140 | ID=MS.gene26902.t1.exon2;Parent=MS.gene26902.t1 |
| chr1.4 | CDS | 80455140 | 80455253 | 80455140 | ID=cds.MS.gene26902.t1;Parent=MS.gene26902.t1 |
| chr1.4 | exon | 80455513 | 80456054 | 80455513 | ID=MS.gene26902.t1.exon3;Parent=MS.gene26902.t1 |
| chr1.4 | CDS | 80455513 | 80456054 | 80455513 | ID=cds.MS.gene26902.t1;Parent=MS.gene26902.t1 |
| chr1.4 | exon | 80457001 | 80457154 | 80457001 | ID=MS.gene26902.t1.exon4;Parent=MS.gene26902.t1 |
| chr1.4 | CDS | 80457001 | 80457154 | 80457001 | ID=cds.MS.gene26902.t1;Parent=MS.gene26902.t1 |
| Gene Sequence |
| Protein sequence |
