AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27108


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27108.t1 MTR_1g026290 96.569 991 23 4 1 988 1 983 0.0 1890
MS.gene27108.t1 MTR_1g026290 96.181 995 23 5 1 988 1 987 0.0 1884
MS.gene27108.t1 MTR_1g026290 96.154 910 27 3 14 923 17 918 0.0 1706
MS.gene27108.t1 MTR_1g026290 96.260 909 26 3 14 922 17 917 0.0 1704
MS.gene27108.t1 MTR_1g026290 97.269 769 14 2 220 988 1 762 0.0 1479
MS.gene27108.t1 MTR_4g116370 34.615 520 279 16 10 493 11 505 4.43e-60 219
MS.gene27108.t1 MTR_4g116370 34.615 520 279 16 10 493 19 513 4.95e-60 219
MS.gene27108.t1 MTR_4g116370 33.201 503 277 16 29 493 10 491 5.01e-52 195
MS.gene27108.t1 MTR_4g116370 31.061 396 225 13 134 493 34 417 1.75e-30 129
MS.gene27108.t1 MTR_4g116370 33.569 283 160 9 234 493 58 335 3.95e-27 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27108.t1 AT5G42220 46.509 888 377 25 1 855 1 823 0.0 609
MS.gene27108.t1 AT5G42220 46.509 888 377 25 1 855 1 823 0.0 609
MS.gene27108.t1 AT5G25270 34.988 423 225 14 24 429 20 409 8.53e-52 193
MS.gene27108.t1 AT5G11080 33.939 165 91 6 24 184 10 160 3.68e-13 72.4
MS.gene27108.t1 AT5G11080 33.939 165 91 6 24 184 10 160 8.47e-13 71.6

Find 312 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTAGGGTGCACGGGTTTC+TGG 0.081281 1.1:-179755 None:intergenic
ATGTTCATCTGTGGGCTTTC+TGG 0.145540 1.1:-179560 None:intergenic
CTCTGTTCATTTACCTGTTC+AGG 0.186974 1.1:-177068 None:intergenic
CTTTCTTGTACAGGAATATT+TGG 0.188581 1.1:+180917 MS.gene27108:intron
GTAATATGGTTTCAGGTTAT+TGG 0.197097 1.1:+172980 MS.gene27108:intron
TGACAAACCTGCACCATTAT+AGG 0.224010 1.1:-175287 None:intergenic
TAATATGGTTTCAGGTTATT+GGG 0.238705 1.1:+172981 MS.gene27108:intron
AAGGGCTTCTGATGATCTTT+TGG 0.244313 1.1:+180753 MS.gene27108:CDS
GCAGGTTGACAGTCAGGATA+TGG 0.259529 1.1:+179601 MS.gene27108:CDS
GCAGGTTGGCAGTCAGGATA+TGG 0.262907 1.1:+179403 MS.gene27108:CDS
GGGTGCACTTCTACTTGAAC+TGG 0.270093 1.1:+175088 MS.gene27108:CDS
GAAGAAGTTTGTGCGGAATT+AGG 0.272535 1.1:-173052 None:intergenic
CCCTGCTAGTTGATTGCATT+TGG 0.273481 1.1:-177019 None:intergenic
AGGTTAGTTGAAGATATATT+TGG 0.275645 1.1:-174054 None:intergenic
GAGCCCGGTTCTGGTGATTC+AGG 0.283347 1.1:+176600 MS.gene27108:CDS
TCATTTACCTGTTCAGGTCT+TGG 0.283401 1.1:-177062 None:intergenic
AAGCTGCTCGAAGGACGTTC+TGG 0.292892 1.1:+180963 MS.gene27108:CDS
CTGTCAACCTGCTGGGCAAT+CGG 0.292962 1.1:-179590 None:intergenic
ACTAGCAGGGACTTGTCTTC+TGG 0.308253 1.1:+177032 MS.gene27108:CDS
CTTGTCCCTTCCCCATTGTT+TGG 0.310487 1.1:-176561 None:intergenic
CAGTCCAAGAGGAGCAGTTT+TGG 0.314139 1.1:-177438 None:intergenic
TATTACCAACAGAGTTTCTA+AGG 0.317262 1.1:-176791 None:intergenic
AGGAATTGCTATGCAGCATT+TGG 0.319967 1.1:+175067 MS.gene27108:CDS
ACCTGCACCATTATAGGATT+TGG 0.321015 1.1:-175281 None:intergenic
GGGTTAGATGGGAGAGTTGC+TGG 0.327771 1.1:-176657 None:intergenic
ATGCTAACTGGAACGGAAAC+AGG 0.333341 1.1:+179629 MS.gene27108:CDS
GCACCAATTGTTTCAGCAAT+TGG 0.338308 1.1:+176531 MS.gene27108:CDS
TCTTCAACTCCTGCAACTTT+AGG 0.346394 1.1:+176377 MS.gene27108:CDS
CACCGTAGTGAGCCCGGTTC+TGG 0.349753 1.1:+176591 MS.gene27108:CDS
CTTCAAACAAGCTCCTTGTT+TGG 0.351103 1.1:+176341 MS.gene27108:CDS
ATGAGTCGTTGCTGATTAAC+TGG 0.353590 1.1:-172349 None:intergenic
GAACATGCACTCTCTCAAAA+TGG 0.354321 1.1:+173951 MS.gene27108:CDS
ATGAGCGGACGTGGGGCTTC+CGG 0.360117 1.1:+177104 MS.gene27108:CDS
ACAACTTTGTAAATCTTGAT+TGG 0.360242 1.1:-177333 None:intergenic
GCAGTTTATATTTCTCCATC+AGG 0.362139 1.1:+175257 MS.gene27108:CDS
TTCTGATAATCGAAGTTTGC+AGG 0.364782 1.1:+179787 MS.gene27108:CDS
TAATGATGAGAGAGATGTTT+TGG 0.365444 1.1:+177286 MS.gene27108:CDS
TTGTGACTCTAGCATATTGC+AGG 0.375677 1.1:+174972 MS.gene27108:intron
TTTCACACAGTGTGGTTCTT+GGG 0.376592 1.1:+172773 MS.gene27108:CDS
GCTGCTGGCAGCACACCATC+TGG 0.377689 1.1:+176693 MS.gene27108:CDS
GGAGCACTTCCAACACCAAC+GGG 0.378459 1.1:-176401 None:intergenic
CAGTCAGAGTCAGTACAAAT+AGG 0.378536 1.1:+175047 MS.gene27108:CDS
CCTCTGCCCTCCTTCCGTTC+CGG 0.379314 1.1:-179438 None:intergenic
CCGATGCCAGAAGGGTTAGA+TGG 0.380811 1.1:-176669 None:intergenic
TTAATTTGATAAATGCTGAT+AGG 0.382229 1.1:+179177 MS.gene27108:CDS
AGATGACAATGGAGCTGAAT+CGG 0.385957 1.1:-176745 None:intergenic
GATCCGTCATCAGCACCTTT+AGG 0.387358 1.1:-179068 None:intergenic
GGCAACCCTTGTGTATTAGA+AGG 0.388446 1.1:-174099 None:intergenic
ATTTCACACAGTGTGGTTCT+TGG 0.390711 1.1:+172772 MS.gene27108:CDS
CTAAATAGTCCTGCTTTGAA+TGG 0.397811 1.1:+179263 MS.gene27108:CDS
TGCCCAGCAGGTTGGCAGTC+AGG 0.400197 1.1:+179397 MS.gene27108:CDS
TGTTGCAACGAGAGTCTTGC+CGG 0.402364 1.1:+180784 MS.gene27108:CDS
TGCCCAGCAGGTTGACAGTC+AGG 0.410461 1.1:+179595 MS.gene27108:CDS
CGAACCTGAATCACCAGAAC+CGG 0.412370 1.1:-176604 None:intergenic
ATCAGGGCCAAATCCTATAA+TGG 0.413483 1.1:+175274 MS.gene27108:CDS
ACTCTCCCATCTAACCCTTC+TGG 0.413671 1.1:+176663 MS.gene27108:CDS
GTGCTCCTCGTAGCCGTGTT+GGG 0.414635 1.1:+172746 MS.gene27108:CDS
GCTGGTATGACATTTCTAAC+AGG 0.415527 1.1:-176639 None:intergenic
TTGTCTTTGAACAGCGAAAC+GGG 0.418382 1.1:-172304 None:intergenic
ACCTTTAGGAGGTTGGAGTC+TGG 0.421199 1.1:-179054 None:intergenic
TTGTTCAGAAACATTGGTAC+TGG 0.424220 1.1:-172086 None:intergenic
ATCTGAACCAAGACCTGAAC+AGG 0.426549 1.1:+177055 MS.gene27108:CDS
AGGAAATCAAGCTGGAAATC+AGG 0.426719 1.1:+173697 MS.gene27108:CDS
GGTCAGCCCGATTGCCCAGC+AGG 0.428555 1.1:+179583 MS.gene27108:CDS
GGAATTGCTATGCAGCATTT+GGG 0.432404 1.1:+175068 MS.gene27108:CDS
GCTGGAAATCAGGCACCATC+TGG 0.433495 1.1:+173707 MS.gene27108:CDS
TATCCTGACTGCCAACCTGC+TGG 0.435244 1.1:-179400 None:intergenic
TTGACTCACCTGATGGCTTA+AGG 0.438048 1.1:+179318 MS.gene27108:CDS
CCAACGGGGCCTAAAGTTGC+AGG 0.440187 1.1:-176386 None:intergenic
GACAAAATTGCAACTGAAGT+AGG 0.442503 1.1:+172322 MS.gene27108:CDS
ACGGAAACAGGGCAGGGTGG+TGG 0.443483 1.1:+179641 MS.gene27108:CDS
TTCGCAGTGTTAACATAGTT+CGG 0.443754 1.1:-175112 None:intergenic
GAATGGCCATACATTGCATT+TGG 0.444494 1.1:+172526 MS.gene27108:CDS
GATATGGGGAATATGCTAAC+TGG 0.446741 1.1:+179617 MS.gene27108:CDS
TCACTGCCGGACCCCGTAGC+AGG 0.447048 1.1:-172578 None:intergenic
CTTTGAATGGTTTGTTGGAA+GGG 0.448136 1.1:+179276 MS.gene27108:CDS
TATCCTGACTGTCAACCTGC+TGG 0.448937 1.1:-179598 None:intergenic
CCTGCCAAAACTGCTCCTCT+TGG 0.448981 1.1:+177434 MS.gene27108:CDS
CCTTCTGGCATCGGAGCTGC+TGG 0.449331 1.1:+176678 MS.gene27108:CDS
AAAGGAAACAATGTTGGATC+AGG 0.451832 1.1:+172724 MS.gene27108:intron
CAGACAGTGTGTTGAGGGAA+TGG 0.453201 1.1:-173911 None:intergenic
CGTACAGAACAGTTGCTTAG+TGG 0.453630 1.1:+174153 MS.gene27108:CDS
AGACAGTGTGTTGAGGGAAT+GGG 0.453746 1.1:-173910 None:intergenic
GTGTTGAGGGAATGGGGAAT+TGG 0.453924 1.1:-173903 None:intergenic
ACTGCGAATGGGACAGTCTT+CGG 0.454831 1.1:+175127 MS.gene27108:CDS
TCCTATCAGCCACTGGTTGA+AGG 0.458836 1.1:-180657 None:intergenic
TAATTCCGCACAAACTTCTT+CGG 0.459355 1.1:+173054 MS.gene27108:CDS
ACGGAAGGAGGGCAGAGGGG+TGG 0.459563 1.1:+179443 MS.gene27108:CDS
GAGCCAATTGCTGAAACAAT+TGG 0.459970 1.1:-176534 None:intergenic
AGCTGCTCGAAGGACGTTCT+GGG 0.461367 1.1:+180964 MS.gene27108:CDS
CAAAACTGCTCCTCTTGGAC+TGG 0.461628 1.1:+177439 MS.gene27108:CDS
TTCTTTCATCAATCAAAGTC+AGG 0.461942 1.1:+179097 MS.gene27108:CDS
TTTCCTTCAGTTTCGTTCCC+CGG 0.463751 1.1:-173680 None:intergenic
GAGGGAACTTCTGCTGATCT+AGG 0.464850 1.1:+175008 MS.gene27108:CDS
CTGACTACCGCTGGTGGGCA+AGG 0.465410 1.1:-179210 None:intergenic
CAAACAAGCTCCTTGTTTGG+CGG 0.466746 1.1:+176344 MS.gene27108:CDS
CAGAGTTTCTAAGGTGTGAC+TGG 0.466854 1.1:-176782 None:intergenic
GCAGGAGTGTGTGTCTGATT+TGG 0.470969 1.1:-172560 None:intergenic
GATATGGGGAATATGTTAAC+CGG 0.471960 1.1:+179419 MS.gene27108:CDS
GCAGAATCTGTTGTTAATGC+TGG 0.472329 1.1:+175230 MS.gene27108:CDS
ATGTGAATGTTTACGTTCCT+AGG 0.472527 1.1:-176422 None:intergenic
CATTTGAAAGGAAACAATGT+TGG 0.473006 1.1:+172718 MS.gene27108:intron
TTGGCTCTAGACCAAACAAT+GGG 0.473293 1.1:+176550 MS.gene27108:CDS
TGTCAGTCAGATTGCCCAGC+AGG 0.474074 1.1:+179385 MS.gene27108:CDS
TCATGTTGTTCAGATTCCTA+TGG 0.474117 1.1:+173751 MS.gene27108:CDS
CCATCTAACCCTTCTGGCAT+CGG 0.474223 1.1:+176669 MS.gene27108:CDS
CCCTTTCACTGCTAGACAGC+TGG 0.474737 1.1:-180735 None:intergenic
ACTTTAGGCCCCGTTGGTGT+TGG 0.474796 1.1:+176392 MS.gene27108:CDS
TTTCAACCAAATGCAATGTA+TGG 0.475715 1.1:-172532 None:intergenic
TCCTGCTTTGAATGGTTTGT+TGG 0.475916 1.1:+179271 MS.gene27108:CDS
AACTATGTTAACACTGCGAA+TGG 0.476187 1.1:+175115 MS.gene27108:CDS
TCTCGCCTTTCACTTGAAGA+TGG 0.477787 1.1:-177401 None:intergenic
CACACTCCTGCTACGGGGTC+CGG 0.479486 1.1:+172572 MS.gene27108:CDS
ACTTTGATTGATGAAAGAAC+TGG 0.480329 1.1:-179093 None:intergenic
AAAATATATTGCAAACACTC+GGG 0.480549 1.1:+179138 MS.gene27108:CDS
GCCAAATGCAATCAACTAGC+AGG 0.482738 1.1:+177018 MS.gene27108:CDS
TTCATTCCCGTAGGGTGCAC+GGG 0.484925 1.1:-179762 None:intergenic
GAGCTTGTTTGAAGTGGAAA+TGG 0.485347 1.1:-176332 None:intergenic
ACCGCGGAGATGAGCGGACG+TGG 0.485367 1.1:+177095 MS.gene27108:CDS
TGTCAACCTGCTGGGCAATC+GGG 0.485522 1.1:-179589 None:intergenic
GCATTTCTCAAGACATTACT+CGG 0.487020 1.1:+172827 MS.gene27108:CDS
GTTGGTTGCACTTCTGAAAG+TGG 0.487800 1.1:+177137 MS.gene27108:CDS
GGCTGACCATGTTCATCTGT+GGG 0.487914 1.1:-179568 None:intergenic
ACCTTCAACCAGTGGCTGAT+AGG 0.490194 1.1:+180656 MS.gene27108:CDS
GTTCAGATTCCTATGGCTGC+GGG 0.490634 1.1:+173758 MS.gene27108:CDS
CCAGCAGCTCCGATGCCAGA+AGG 0.490801 1.1:-176678 None:intergenic
GTGGTTAGTGCTTCAAGTGT+TGG 0.491485 1.1:-174120 None:intergenic
ATCTCTCTCATCATTACTAC+AGG 0.491809 1.1:-177279 None:intergenic
CAGGTTGGCAGTCAGGATAT+GGG 0.492293 1.1:+179404 MS.gene27108:CDS
CAGGTTGACAGTCAGGATAT+GGG 0.492293 1.1:+179602 MS.gene27108:CDS
AATATATCTTCAACTAACCT+TGG 0.492822 1.1:+174057 MS.gene27108:CDS
AACTGGAACGGAAACAGGGC+AGG 0.493231 1.1:+179634 MS.gene27108:CDS
CATCAGCACCTTTAGGAGGT+TGG 0.493318 1.1:-179061 None:intergenic
TTTCATTCCCGTAGGGTGCA+CGG 0.495737 1.1:-179763 None:intergenic
GCTTTGAATGGTTTGTTGGA+AGG 0.495809 1.1:+179275 MS.gene27108:CDS
TCAGACACACACTCCTGCTA+CGG 0.495909 1.1:+172565 MS.gene27108:CDS
CAGACACACACTCCTGCTAC+GGG 0.497357 1.1:+172566 MS.gene27108:CDS
CCCTCCGAGAGCTTGTATCA+TGG 0.498027 1.1:-179699 None:intergenic
AACATGCTCCTTAAGCCATC+AGG 0.499359 1.1:-179326 None:intergenic
AACAAGGAGCTTGTTTGAAG+TGG 0.499575 1.1:-176338 None:intergenic
CCGGAACGGAAGGAGGGCAG+AGG 0.500044 1.1:+179438 MS.gene27108:CDS
ATTGTATCACAAGCCCTTGG+TGG 0.501552 1.1:+179503 MS.gene27108:CDS
GGTGCTCCTCGTAGCCGTGT+TGG 0.503290 1.1:+172745 MS.gene27108:CDS
GATGACAATGGAGCTGAATC+GGG 0.503305 1.1:-176744 None:intergenic
GCGAATCAATCTTCAAATGA+AGG 0.505900 1.1:+172055 MS.gene27108:CDS
ATTATAGGATTTGGCCCTGA+TGG 0.508302 1.1:-175272 None:intergenic
CGGAACGGAAGGAGGGCAGA+GGG 0.509216 1.1:+179439 MS.gene27108:CDS
CTGGTGATTCAGGTTCGACA+CGG 0.513653 1.1:+176610 MS.gene27108:CDS
TTTGTCTTTGAACAGCGAAA+CGG 0.514925 1.1:-172305 None:intergenic
GATTTACAAAGTTGTTCTAG+TGG 0.515216 1.1:+177341 MS.gene27108:CDS
GGCTCTGCAGCAGAGAATAG+TGG 0.516233 1.1:-179734 None:intergenic
ATCTGAACAACATGAGGAAA+CGG 0.516291 1.1:-173743 None:intergenic
TGTGGCGGGTTTAATGTCTC+AGG 0.517663 1.1:+179238 MS.gene27108:CDS
TGTTCAGATTCCTATGGCTG+CGG 0.519569 1.1:+173757 MS.gene27108:CDS
ACTGCATTGAAAGAAGGAAC+AGG 0.520422 1.1:-173788 None:intergenic
GAACACAGACAGTGTGTTGA+GGG 0.521105 1.1:-173916 None:intergenic
TCCACTAAAGATGTTGAGAA+TGG 0.521526 1.1:+172509 MS.gene27108:intron
ATTCCTACTGCATTGAAAGA+AGG 0.523356 1.1:-173794 None:intergenic
GTTCTTGGGACTATTAATGT+GGG 0.523988 1.1:+172787 MS.gene27108:CDS
GCCAAATCCTATAATGGTGC+AGG 0.524609 1.1:+175280 MS.gene27108:CDS
GGTTCTTGGGACTATTAATG+TGG 0.525047 1.1:+172786 MS.gene27108:CDS
CAAAATATATTGCAAACACT+CGG 0.525718 1.1:+179137 MS.gene27108:CDS
GGAACGGAAGGAGGGCAGAG+GGG 0.527535 1.1:+179440 MS.gene27108:CDS
TCCAGCTGTCTAGCAGTGAA+AGG 0.528815 1.1:+180734 MS.gene27108:CDS
ATCTTGTTGTTCAGAAACAT+TGG 0.528977 1.1:-172092 None:intergenic
GGGCTGACCATGTTCATCTG+TGG 0.529144 1.1:-179569 None:intergenic
TCTGCTGATCTAGGTGTAAG+AGG 0.529800 1.1:+175017 MS.gene27108:CDS
CCTCCGAGAGCTTGTATCAT+GGG 0.530428 1.1:-179698 None:intergenic
CCAAGGGCTTGTGATACAAT+GGG 0.531514 1.1:-179500 None:intergenic
CCAGAAACCCGTGCACCCTA+CGG 0.531887 1.1:+179755 MS.gene27108:CDS
GCTTCCGGTGTATCCTCAGT+TGG 0.536156 1.1:+177119 MS.gene27108:CDS
GATGGAGAAATATAAACTGC+TGG 0.536793 1.1:-175254 None:intergenic
GGGGTGGTGTTGACCTCTCA+AGG 0.536912 1.1:+179459 MS.gene27108:CDS
TGCAGGACGCATGGAGCGAG+AGG 0.537065 1.1:+174989 MS.gene27108:CDS
TGGTGATTCAGGTTCGACAC+GGG 0.537877 1.1:+176611 MS.gene27108:CDS
CGGTAGTCAGATTGATGTGG+CGG 0.538847 1.1:+179223 MS.gene27108:CDS
AAAACTGCTCCTCTTGGACT+GGG 0.539076 1.1:+177440 MS.gene27108:CDS
TTGTATCACAAGCCCTTGGT+GGG 0.540065 1.1:+179504 MS.gene27108:CDS
TGACAGTGTTCATCATCTGC+GGG 0.540994 1.1:-179367 None:intergenic
ACCAGACTCCAACCTCCTAA+AGG 0.542230 1.1:+179053 MS.gene27108:CDS
ACCAAGGGCTTGTGATACAA+TGG 0.542806 1.1:-179501 None:intergenic
CAGAAACCCGTGCACCCTAC+GGG 0.542977 1.1:+179756 MS.gene27108:CDS
AACTCTGTTGGTAATATGCA+AGG 0.543610 1.1:+176798 MS.gene27108:CDS
GAAACTGAAGGAAATCAAGC+TGG 0.543666 1.1:+173689 MS.gene27108:CDS
TAGGAGCATTCATTGTGCCC+TGG 0.544651 1.1:-173033 None:intergenic
AAATCAGGCACCATCTGGAC+AGG 0.545938 1.1:+173712 MS.gene27108:CDS
TGCACTAGCTGTCTCACTGC+CGG 0.547750 1.1:-172591 None:intergenic
GTCTGTGTTCATAAATCGCA+TGG 0.548128 1.1:+173929 MS.gene27108:CDS
ATCCTGACTGCCAACCTGCT+GGG 0.548407 1.1:-179399 None:intergenic
CTAGCATATTGCAGGACGCA+TGG 0.549101 1.1:+174980 MS.gene27108:intron
TGACTACCGCTGGTGGGCAA+GGG 0.550222 1.1:-179209 None:intergenic
ACTGAACACCGTAGTGAGCC+CGG 0.552562 1.1:+176585 MS.gene27108:CDS
ATCAATCTGACTACCGCTGG+TGG 0.553084 1.1:-179216 None:intergenic
GGTGCACTTCTACTTGAACT+GGG 0.554167 1.1:+175089 MS.gene27108:CDS
AGAAAGTGGACCGCCAAACA+AGG 0.554785 1.1:-176354 None:intergenic
CCAGGTTGACCTTCAACCAG+TGG 0.554927 1.1:+180648 MS.gene27108:intron
TATGAGTGGTTTAGAGCGTA+AGG 0.555258 1.1:+177463 MS.gene27108:CDS
TTCTGAAAGTGGAGTAGAGA+AGG 0.555816 1.1:+177148 MS.gene27108:CDS
ACTATGTTAACACTGCGAAT+GGG 0.555829 1.1:+175116 MS.gene27108:CDS
AGATATCTGTAGGTGGACTC+AGG 0.555870 1.1:-180687 None:intergenic
ATGATACAAGCTCTCGGAGG+GGG 0.556251 1.1:+179701 MS.gene27108:CDS
CCAGCTGTCTAGCAGTGAAA+GGG 0.556611 1.1:+180735 MS.gene27108:CDS
TCAATCAAAGTCAGGAAACC+AGG 0.557847 1.1:+179105 MS.gene27108:CDS
GAACAACATGAGGAAACGGT+TGG 0.558266 1.1:-173739 None:intergenic
CCCATTGTATCACAAGCCCT+TGG 0.558380 1.1:+179500 MS.gene27108:CDS
ATTTGAAGATTGATTCGCCA+TGG 0.560305 1.1:-172050 None:intergenic
GGTTCTGTAGCAGAGAATAG+TGG 0.560598 1.1:-179539 None:intergenic
CCATGATACAAGCTCTCGGA+GGG 0.562487 1.1:+179699 MS.gene27108:CDS
CGATCAATCCTATCAGCCAC+TGG 0.564835 1.1:-180664 None:intergenic
GTATCACAAGCCCTTGGTGG+GGG 0.565830 1.1:+179506 MS.gene27108:CDS
GCAGGAGTTGAAGAAGAAAG+TGG 0.566669 1.1:-176368 None:intergenic
CAGTTTATATTTCTCCATCA+GGG 0.566861 1.1:+175258 MS.gene27108:CDS
CGATGCCAGAAGGGTTAGAT+GGG 0.567423 1.1:-176668 None:intergenic
GACAGTGTGTTGAGGGAATG+GGG 0.567926 1.1:-173909 None:intergenic
ATCCTGACTGTCAACCTGCT+GGG 0.568139 1.1:-179597 None:intergenic
GGTATGGCTCCCGCAGCCAT+AGG 0.569031 1.1:-173767 None:intergenic
AGTCAGGAAACCAGGACAGA+TGG 0.569397 1.1:+179113 MS.gene27108:CDS
TTCTTGGGACTATTAATGTG+GGG 0.569682 1.1:+172788 MS.gene27108:CDS
AAATATATTGCAAACACTCG+GGG 0.570038 1.1:+179139 MS.gene27108:CDS
GGATACGATAGTGAGAAAGA+AGG 0.570907 1.1:-172402 None:intergenic
ATGTTAACCGGAACGGAAGG+AGG 0.571880 1.1:+179431 MS.gene27108:CDS
CACATCAATCTGACTACCGC+TGG 0.573025 1.1:-179219 None:intergenic
CCTCTTGGACTGGGTATGAG+TGG 0.573762 1.1:+177449 MS.gene27108:CDS
TCTTGGGACTATTAATGTGG+GGG 0.574459 1.1:+172789 MS.gene27108:CDS
GCTCGAAGGACGTTCTGGGA+GGG 0.576177 1.1:+180968 MS.gene27108:CDS
TCCAACAAACCATTCAAAGC+AGG 0.577193 1.1:-179272 None:intergenic
GTGGTGGTCTCGACTTCTCA+AGG 0.577739 1.1:+179657 MS.gene27108:CDS
CTGACAGTGTTCATCATCTG+CGG 0.578106 1.1:-179368 None:intergenic
CCGTCATCAGCACCTTTAGG+AGG 0.578916 1.1:-179065 None:intergenic
TTGGTGTTGGAAGTGCTCCT+AGG 0.580894 1.1:+176405 MS.gene27108:CDS
CACCAGAACCGGGCTCACTA+CGG 0.581466 1.1:-176593 None:intergenic
ATGCTCCATCTTCAAGTGAA+AGG 0.582046 1.1:+177396 MS.gene27108:CDS
GCAGCAGAGAATAGTGGTGG+AGG 0.584726 1.1:-179728 None:intergenic
CCTGCAACTTTAGGCCCCGT+TGG 0.585045 1.1:+176386 MS.gene27108:CDS
ACGGGAGTTGACTCACCTGA+TGG 0.587577 1.1:+179311 MS.gene27108:CDS
CGCGGAGATGAGCGGACGTG+GGG 0.588211 1.1:+177097 MS.gene27108:CDS
TGAAACAATTGGTGCAAGAG+AGG 0.589969 1.1:-176523 None:intergenic
CCTTCAGTTTCGTTCCCCGG+TGG 0.591488 1.1:-173677 None:intergenic
CAGCGACCCTTGCCCACCAG+CGG 0.592187 1.1:+179203 MS.gene27108:CDS
TGTATCACAAGCCCTTGGTG+GGG 0.593198 1.1:+179505 MS.gene27108:CDS
CAAACAATGGGGAAGGGACA+AGG 0.594079 1.1:+176562 MS.gene27108:CDS
AATATGTTAACCGGAACGGA+AGG 0.594563 1.1:+179428 MS.gene27108:CDS
CAGCAGCTCCGATGCCAGAA+GGG 0.595475 1.1:-176677 None:intergenic
GGTAGTCAGATTGATGTGGC+GGG 0.595486 1.1:+179224 MS.gene27108:CDS
GGGGAATATGCTAACTGGAA+CGG 0.596357 1.1:+179622 MS.gene27108:CDS
GTAGCAGAGAATAGTGGTGG+AGG 0.597993 1.1:-179533 None:intergenic
GTAAACATTCACATACATGC+TGG 0.598953 1.1:+176431 MS.gene27108:CDS
TGAACACAGACAGTGTGTTG+AGG 0.599080 1.1:-173917 None:intergenic
CCAAATGCAATCAACTAGCA+GGG 0.599347 1.1:+177019 MS.gene27108:CDS
CCTCCTAAAGGTGCTGATGA+CGG 0.599760 1.1:+179065 MS.gene27108:CDS
GGGGAATATGTTAACCGGAA+CGG 0.601844 1.1:+179424 MS.gene27108:CDS
GGTGATTCAGGTTCGACACG+GGG 0.602931 1.1:+176612 MS.gene27108:CDS
TCTAGACCAAACAATGGGGA+AGG 0.604140 1.1:+176555 MS.gene27108:CDS
ATTGAAAGAAGGAACAGGTA+TGG 0.608235 1.1:-173783 None:intergenic
AATATGGTTTCAGGTTATTG+GGG 0.609927 1.1:+172982 MS.gene27108:intron
TTGATTGATGAAAGAACTGG+AGG 0.610446 1.1:-179090 None:intergenic
CATTTCTCAAGACATTACTC+GGG 0.611396 1.1:+172828 MS.gene27108:CDS
AGGAGCACTTCCAACACCAA+CGG 0.613156 1.1:-176402 None:intergenic
ATGCCCATGATACAAGCTCT+CGG 0.617587 1.1:+179695 MS.gene27108:CDS
AGTCAGATTGCCCAGCAGGT+TGG 0.619153 1.1:+179389 MS.gene27108:CDS
AGGTTGGCAGTCAGGATATG+GGG 0.622013 1.1:+179405 MS.gene27108:CDS
AGGTTGACAGTCAGGATATG+GGG 0.622013 1.1:+179603 MS.gene27108:CDS
ATCGGGTGGTAGCTGTGAAG+TGG 0.627292 1.1:-176727 None:intergenic
TCTGTTGAAGCATCCTTGAG+AGG 0.630215 1.1:-179472 None:intergenic
TGCTAACTGGAACGGAAACA+GGG 0.630324 1.1:+179630 MS.gene27108:CDS
ATAGGAATCTGAACAACATG+AGG 0.630849 1.1:-173749 None:intergenic
CCACTCATACCCAGTCCAAG+AGG 0.633234 1.1:-177449 None:intergenic
TGTTAACCGGAACGGAAGGA+GGG 0.633672 1.1:+179432 MS.gene27108:CDS
TTCAGAAGTGCAACCAACTG+AGG 0.633745 1.1:-177132 None:intergenic
GGTTGGAATGCCTGTCCAGA+TGG 0.633876 1.1:-173722 None:intergenic
TGGGCAAATTTCACACAGTG+TGG 0.634556 1.1:+172765 MS.gene27108:CDS
GAACCTGAATCACCAGAACC+GGG 0.636088 1.1:-176603 None:intergenic
ATTCTGCTCGTTGATCTCCA+AGG 0.637073 1.1:-174074 None:intergenic
CCGCGGAGATGAGCGGACGT+GGG 0.638934 1.1:+177096 MS.gene27108:CDS
CCACCGGGGAACGAAACTGA+AGG 0.639658 1.1:+173677 MS.gene27108:CDS
TGCTCGAAGGACGTTCTGGG+AGG 0.640302 1.1:+180967 MS.gene27108:CDS
GAATTGCCTTCTAATACACA+AGG 0.641086 1.1:+174093 MS.gene27108:CDS
CTGGTGGGCAAGGGTCGCTG+AGG 0.641101 1.1:-179200 None:intergenic
ACAGCACGGAAGATATCTGT+AGG 0.645362 1.1:-180697 None:intergenic
TCAGCTAAAACAGATGACAA+TGG 0.645638 1.1:-176756 None:intergenic
TGTGTGAAATTTGCCCAACA+CGG 0.647094 1.1:-172759 None:intergenic
TCAATCTGACTACCGCTGGT+GGG 0.647138 1.1:-179215 None:intergenic
GATGTAAGTAAGCTGCTCGA+AGG 0.650206 1.1:+180954 MS.gene27108:CDS
AGAGATACCGCGGAGATGAG+CGG 0.652439 1.1:+177089 MS.gene27108:CDS
ATTGGCTCTAGACCAAACAA+TGG 0.655176 1.1:+176549 MS.gene27108:CDS
TCTGTAGCAGAGAATAGTGG+TGG 0.656147 1.1:-179536 None:intergenic
CAGCGGTAGTCAGATTGATG+TGG 0.657434 1.1:+179220 MS.gene27108:CDS
GGAACGGAAACAGGGCAGGG+TGG 0.658322 1.1:+179638 MS.gene27108:CDS
AGAAAGCCCACAGATGAACA+TGG 0.659366 1.1:+179562 MS.gene27108:CDS
CATGATACAAGCTCTCGGAG+GGG 0.659991 1.1:+179700 MS.gene27108:CDS
ACTGGAACGGAAACAGGGCA+GGG 0.660931 1.1:+179635 MS.gene27108:CDS
GCAGGACGCATGGAGCGAGA+GGG 0.662033 1.1:+174990 MS.gene27108:CDS
CTAGACCAAACAATGGGGAA+GGG 0.662121 1.1:+176556 MS.gene27108:CDS
TCACACCTTAGAAACTCTGT+TGG 0.665440 1.1:+176786 MS.gene27108:CDS
CCCATGATACAAGCTCTCGG+AGG 0.668225 1.1:+179698 MS.gene27108:CDS
CCCACGTCCGCTCATCTCCG+CGG 0.669954 1.1:-177096 None:intergenic
GACAATGGAGCTGAATCGGG+TGG 0.672692 1.1:-176741 None:intergenic
GCAACCAACTGAGGATACAC+CGG 0.678404 1.1:-177123 None:intergenic
ACTGACCGAAGAAGTTTGTG+CGG 0.679232 1.1:-173059 None:intergenic
GCTAGTGCAAATAGTAACCG+AGG 0.687450 1.1:+172605 MS.gene27108:CDS
TCTGCAGCAGAGAATAGTGG+TGG 0.699613 1.1:-179731 None:intergenic
GCACGGAAGATATCTGTAGG+TGG 0.700840 1.1:-180694 None:intergenic
TCACAACCAGACCCAAACTG+AGG 0.703188 1.1:+177247 MS.gene27108:intron
AATATATTGCAAACACTCGG+GGG 0.705829 1.1:+179140 MS.gene27108:CDS
ATTTGCCCAACACGGCTACG+AGG 0.706337 1.1:-172751 None:intergenic
TTCTGTACGATGCAATACAG+TGG 0.709351 1.1:-174139 None:intergenic
GTGGAGATACTGAATCCAGA+TGG 0.710982 1.1:-176708 None:intergenic
AAATGAACAGAGAGATACCG+CGG 0.715935 1.1:+177079 MS.gene27108:CDS
AATTGCCTTCTAATACACAA+GGG 0.735513 1.1:+174094 MS.gene27108:CDS
TGGCTCTAGACCAAACAATG+GGG 0.735668 1.1:+176551 MS.gene27108:CDS
AGACACACACTCCTGCTACG+GGG 0.754610 1.1:+172567 MS.gene27108:CDS
GAGCACTTCCAACACCAACG+GGG 0.778341 1.1:-176400 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.1 gene 172052 181001 172052 ID=MS.gene27108
chr1.1 mRNA 172052 181001 172052 ID=MS.gene27108.t1;Parent=MS.gene27108
chr1.1 exon 172052 172183 172052 ID=MS.gene27108.t1.exon1;Parent=MS.gene27108.t1
chr1.1 CDS 172052 172183 172052 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 172301 172418 172301 ID=MS.gene27108.t1.exon2;Parent=MS.gene27108.t1
chr1.1 CDS 172301 172418 172301 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 172519 172626 172519 ID=MS.gene27108.t1.exon3;Parent=MS.gene27108.t1
chr1.1 CDS 172519 172626 172519 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 172728 172849 172728 ID=MS.gene27108.t1.exon4;Parent=MS.gene27108.t1
chr1.1 CDS 172728 172849 172728 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 172995 173075 172995 ID=MS.gene27108.t1.exon5;Parent=MS.gene27108.t1
chr1.1 CDS 172995 173075 172995 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 173674 173808 173674 ID=MS.gene27108.t1.exon6;Parent=MS.gene27108.t1
chr1.1 CDS 173674 173808 173674 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 173903 173972 173903 ID=MS.gene27108.t1.exon7;Parent=MS.gene27108.t1
chr1.1 CDS 173903 173972 173903 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 174046 174197 174046 ID=MS.gene27108.t1.exon8;Parent=MS.gene27108.t1
chr1.1 CDS 174046 174197 174046 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 174984 175148 174984 ID=MS.gene27108.t1.exon9;Parent=MS.gene27108.t1
chr1.1 CDS 174984 175148 174984 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 175230 175301 175230 ID=MS.gene27108.t1.exon10;Parent=MS.gene27108.t1
chr1.1 CDS 175230 175301 175230 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 176332 176452 176332 ID=MS.gene27108.t1.exon11;Parent=MS.gene27108.t1
chr1.1 CDS 176332 176452 176332 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 176520 176840 176520 ID=MS.gene27108.t1.exon12;Parent=MS.gene27108.t1
chr1.1 CDS 176520 176840 176520 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 177018 177169 177018 ID=MS.gene27108.t1.exon13;Parent=MS.gene27108.t1
chr1.1 CDS 177018 177169 177018 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 177257 177484 177257 ID=MS.gene27108.t1.exon14;Parent=MS.gene27108.t1
chr1.1 CDS 177257 177484 177257 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 179047 179808 179047 ID=MS.gene27108.t1.exon15;Parent=MS.gene27108.t1
chr1.1 CDS 179047 179808 179047 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 180652 180807 180652 ID=MS.gene27108.t1.exon16;Parent=MS.gene27108.t1
chr1.1 CDS 180652 180807 180652 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
chr1.1 exon 180930 181001 180930 ID=MS.gene27108.t1.exon17;Parent=MS.gene27108.t1
chr1.1 CDS 180930 181001 180930 ID=cds.MS.gene27108.t1;Parent=MS.gene27108.t1
Gene Sequence

>MS.gene27108

ATGGCGAATCAATCTTCAAATGAAGGCAGCAGCTCCAGTACCAATGTTTCTGAACAACAAGATTCAACTCTTCTTCATCTCAATATCAAGACTCTTGATTCGAGAATCTACACTTTTCAAGTCGACAAAAATGTCAGCTTTATTCAATCTCAAATCAATCTGCTTCTTCTTCTGTTTGTTTGTTTGTTTGTTTTTGTTATGCGGTTACTGATTGATTACTCTTTTCAATTTTCAATTATTTCATTTCAGATGCCCGTTTCGCTGTTCAAAGACAAAATTGCAACTGAAGTAGGTTTACCAGTTAATCAGCAACGACTCATTTTTAGAGGAAAAGTCTTAAAGGATGAACACCTTCTTTCTCACTATCGTATCCTTTTATTATTTCTACATCAGCTTTTAAATCACTCATGTAGTAGAATTTCATGTATCATAAAATGCCTCATTACTGTAATCCTTATCCACTAAAGATGTTGAGAATGGCCATACATTGCATTTGGTTGAAAGACAGCCAAATCAGACACACACTCCTGCTACGGGGTCCGGCAGTGAGACAGCTAGTGCAAATAGTAACCGAGGTATAACCTAAGGCATTTGCACTCCCCCGTTCGATCCAGGGTTTTTCATAGATCAACTTGTATTGTGCTAAATGCTGATGCTAAATTTTATCATTTGAAAGGAAACAATGTTGGATCAGGTGCTCCTCGTAGCCGTGTTGGGCAAATTTCACACAGTGTGGTTCTTGGGACTATTAATGTGGGGGATCAGGGTGGTGAAGGCATTTCTCAAGACATTACTCGGGTTCGTTATTGTATTCTTTGCTTCTACCTACAGTATCTACAACTTATACTTTCTATTAAGTTTTCTTTCTTTCATATGTGTTAGTGATGATGTTTTGCTTTGCTATTGCCTGAAAACATTATTTATTGATGTAATATGGTTTCAGGTTATTGGGGCAGTTTTGAATTCTTTTGCAAATGGGGGCCAGGGCACAATGAATGCTCCTAATTCCGCACAAACTTCTTCGGTCAGTGTTACTTTTTGCTTGAGAAAATACGACTTATTGCCATTTGTGTAATTTACTAGGTTATTATTTTCTTATACGCGAATCACTCATCACTCTAAATTAAATTCACAGCCATCTATGATTTTAGTCTGCATTTAGATTATCCTTGAAAGTGCATGGTAATTGTTGTTTAGGTTCCTTCTACTCGTCCTTTCAATTTTATCTTCTTTGATCATGATTAATGAAGTAATCACATCACATGTTGCGGTAACTATTCCAGCTGGTTTGTGTTTCGTAGTGGTAAACAGTTTCATCTGTTCTCCTACTAGTGATAAATATCAAATATCCTATAAATGATTATATTTATCTTCAAAAGTTGATAATTTATTTACTTTTGGCATATCTTTTCCCCCTTTTGGTAAAATGAATAATTTTTTTTTTCCTTATGATTTTTATGATGACACGGTTAATTCCTTTTATTCTCTACCAGTAGTTTAATTTTGAAAAAGATTCAGTGCAGCACAAACATTTGTCCTCTTGAGTCGGTAAATGTTGTTTTGCTACATCCATACTGCAATATATGTGCAACACCTTAACTGTAGCTGAATCCATTTTCTAGGCTCCACCGGGGAACGAAACTGAAGGAAATCAAGCTGGAAATCAGGCACCATCTGGACAGGCATTCCAACCGTTTCCTCATGTTGTTCAGATTCCTATGGCTGCGGGAGCCATACCTGTTCCTTCTTTCAATGCAGTAGGAATATAGTCTCTCTTCTGCACTTCCTCTTAATTTTTACTCCTTTAAATTTTGAATTTGAATATCATTTAACTCTCTCCCATCATTTCAGCCAATTCCCCATTCCCTCAACACACTGTCTGTGTTCATAAATCGCATGGAACATGCACTCTCTCAAAATGGTAATGGTACTGAAACTGTAATCTTCTATCTAGAATTGAAAGGGCACATAAATATTTATGTTTTCTTTTGCAGGTTATGGGCCAAATATATCTTCAACTAACCTTGGAGATCAACGAGCAGAATTGCCTTCTAATACACAAGGGTTGCCAACACTTGAAGCACTAACCACTGTATTGCATCGTACAGAACAGTTGCTTAGTGGTCAAGCTGTTTCTGCGCTATCTGTAATTACCACATCCCATTTATATACATACATTTTTTCACTATCTGTACTTGTTAGTTGTTTGTTGTTGTACTATAAACTTTACTGGAAACTGGCCAGAATTCTTGCCTAGGATAATCCTAAATATGTCCAAATTTCGGACACAACTAAATTGTCTTAATATTGTAACCATTGTAAATCTTTAATTTGTTATGTGTGTATATATGTGTGTGTGAGAGAGAGTGAAAGAAAGGGAGGACATAAAATGTCTTCATAACGATTGGTACTTTGAGCATGCTTTGATGGTAAAAGTAAAACTGTTTGTATGAACTGAAAATAATTGAGTCTTCCTTCTCTTTGCTTTTTTATCTCCATTAAACTCCTCATATGTATGGAAATCTACTACTTTTAGCAATGTTGGACTTTGTTGTACTAAGATAACACCTGCAATTTTACTCATAATATCAGTTGATTAATCGAGGGACCACCCATATGCATCACATTCTGTTGTGCCAGTTAAAGATCACATAGGATATGAAGGATGTATTTTTCTGAATACCCTCTTGTTGGTTAAAATTTCTAATCTAATGTATCCTGCTTTCCATCCCTGATATATGTGTTGGTGCAATGATCCATGAATCTGATAGAATCCAAGTCTCAAACAGAAGTGCTTCTGTTTATTTAACACAATAATGTTGTCATGATGAAGTGCATTTTAATTGTATGGATTTGTTAATGTCAACTAGTCTCAATATTTTCATCCTTTATGTTTATCTGATTCTGTTTTACTTGTAATTTGTGACTCTAGCATATTGCAGGACGCATGGAGCGAGAGGGAACTTCTGCTGATCTAGGTGTAAGAGGTCAAATACAGTCAGAGTCAGTACAAATAGGAATTGCTATGCAGCATTTGGGTGCACTTCTACTTGAACTGGGCCGAACTATGTTAACACTGCGAATGGGACAGTCTTCGGTATGTTTTCATTATTTTCATTTGGGATTTGGATTGCTTTCTTTTGACAAAATACTTTTCATGATCATATTCAATTTTCAGGCAGAATCTGTTGTTAATGCTGGACCAGCAGTTTATATTTCTCCATCAGGGCCAAATCCTATAATGGTGCAGGTTTGTCATTTTTGATATATTCACATTATTTGATTATTTGATATTTCAATTAAGTTGATGACAACATGCAATAAACTGTGCTTAGTTGATATGTCAAAACTTGACTCTAGACATTATAAATAGTTAAGTTGGTTAGATTATTGATAAAGGATTGAAGATTGGAAAAAAGTCAGTTGATAACCATTTTCATTTCAATACCTTGCCCTAGTCAAGCTGTTTGATGAAAGTTCAATTGTGCAACATGAGTCTTCAAATTTTATGACCTGAACTTGACTCTTAACTGTTCACGTGTTATACTGCATACTTGGGGTTTCATGGCTTAGGAACAATACAAGCTATATTTCTGCCAATATGCAAGAAAAATAGTTGATATTCATTAAATTATGTTTAAGATAACATGTGATCTCTATTAGGCATTAGTTGAATAGATTGTTCGTGAAAGAAGAGGTTTTAAGAATGATAAAAAATTCTTATGAATCTGATTGCATTCAAATATTTTTGTATAAGGCTAATTTACTCTGTATGGTACATCAAAGAAGGAAAAAACAGATATCTTTTTTAAACGAAAATAAAGCAAGCTAGACAAGAGACTAGTGAGGGAAATTGAAAAAAATCAATATCATATTTTCCTGTTTCGGTTGTCTAGAATTAGGTTTATCTCTTCCTAATACAACCATCGGGTGAGAACAAGTTTAAATTGTTAACCAATCTAATATGACGATGGAGACTACTATGTTTTGTGTCTCTGTAGCTGGATGTCGGTGTAGCAATTTTCAATGATCTTAATTTCGAACACATCATTTTTGTTGTACAATCTAGATCATGGTTCTCTGGGGGTTGATAATTGTGTATGCTCAAGCTCAATCAACGTAAGTTCATCGTTGAAGACTGTAGCATTTTTGATGGTCAATCTACTGAAATTTGTCTTTATCTGCGTGGTTTTGTTGATACTTTATATATTCACTGTTTTTTTTTTTTTGAGCAAATATATTCACTGTTTTTGTTTACACTGATAATGTGCTATTTTCAGCCATTTCCACTTCAAACAAGCTCCTTGTTTGGCGGTCCACTTTCTTCTTCAACTCCTGCAACTTTAGGCCCCGTTGGTGTTGGAAGTGCTCCTAGGAACGTAAACATTCACATACATGCTGGTAAGTAAAACTAATTGTACTTCTCCTGGTGAGATATACAAAATTTTTTAATTTTGTATCCTGCCAGGTGCCTCTCTTGCACCAATTGTTTCAGCAATTGGCTCTAGACCAAACAATGGGGAAGGGACAAGGACTGAACACCGTAGTGAGCCCGGTTCTGGTGATTCAGGTTCGACACGGGGTTTACCTGTTAGAAATGTCATACCAGCAACTCTCCCATCTAACCCTTCTGGCATCGGAGCTGCTGGCAGCACACCATCTGGATTCAGTATCTCCACTTCACAGCTACCACCCGATTCAGCTCCATTGTCATCTGTTTTAGCTGAAATCCAGTCACACCTTAGAAACTCTGTTGGTAATATGCAAGGAGACAGCACAATTTTGTCAGGTGGTTAGCAATTCATTGTTTTAATAATATGTATGGGTCTCAATACAATAGCATTGATTCTGCTCCTTCATCATTTCCTTCTGACAGATAGTTTGCCTATATATATTGTTTCATTATATGTGTAGATAGTCTCAATACAATCATATTTAACTTCTAAACTGTTCTGCATCCAATTAGGCCAAATGCAATCAACTAGCAGGGACTTGTCTTCTGGATCTGAACCAAGACCTGAACAGGTAAATGAACAGAGAGATACCGCGGAGATGAGCGGACGTGGGGCTTCCGGTGTATCCTCAGTTGGTTGCACTTCTGAAAGTGGAGTAGAGAAGGTATTACTTTTGTTCATACATGGTGATATATCTATCCCCTACAAGCATAGTTTTTATTTGACTAATAGTTAGTCCGATCACAACCAGACCCAAACTGAGGCAATCAAAACCTGTAGTAATGATGAGAGAGATGTTTTGGTCGACAAATTTGTTTCAAGTTCTTCCAATCAAGATTTACAAAGTTGTTCTAGTGGAGAAGCAGCTGTAAAATCAGAAAAAGTACAGGATGCTCCATCTTCAAGTGAAAGGCGAGATGTAACTGAACCTGCCAAAACTGCTCCTCTTGGACTGGGTATGAGTGGTTTAGAGCGTAAGGTAAGCATATTGTTTATGTTTTTGTGAATGAGAAGCTTGAATTTCGTAATTGATGCTATGTATTTTGCCAATGGATTTGTTTGTTGGGAGGTTATTTGCATGGTGTTTGAAAATTTTCTGGATGAGTCTTCTCTTTGAATTTATTATATATTTGCTTCTTCTTTTTTTTTTTTTTTTTTTGTGCGTTATATTTTATGATAAACTTGCTGCAGTAGTTCCATTCATCCCTTCATATTTTGTCCTCAAGGATACATCATATTTGTTGTAATTATGATTGGGAAGAAAATTGAACACTGAATTATTACTAGGTTTAACTTTTAAGTACTTTCGGTCCATCATACAAATTGACGGGGAGGAGAGATATCTAGATGTCTATCATACGATTCAAATGGGGTGGATGAAATAGTTGAATGATTGGGGTGGGATATGTGATAGGAGAAAAATACCTCGCAAGGTTAAAGGACAATTTTATCACATGCATATAAGACCAACAATGTTGTATGAAACTAAATGTTGGGTGGTAAAAAGTCAACAAGAAAGTAAACTTAGTGTCACAAAGATGAGTGTTATGATAGATATGCAAAATAGGACTATAATACAATTGTTAGAGAGAAAATTGGGACAACTTCCATAGTAGAGAAAATGGTGAATTATCGTCTTAGGTGGGGTGAAGGGAGACCAAGGAAAAGTATATGTCAAACCATTTAGAGAGATTTATAGGTGAATGGTTTGTATTTGGACCTGACACATGGCAAGAATTTATGGAATCAATTGATGCATGGATTAAACTGCACCTAGTGTAAAAGGGTTTGGCGTTGGTTGTGGGGATGACATGGTTGATCAGCCCTTATATGCCATTCAGCTGTTTAACCTGGAAGTCTCGTATTTATGTTTTTATATTTTGCCAGTTAGCATGATTGGTAATTTTAACATTCTTTTGAAGGTAATTTTAGTGCACTGTGCACATCAATCGTTATGTTAAGCTTAATATTTGGGGATTATCATTAAAAAGAGCAGATCTCTAGCTGACATGATAGGAATATTTACTATGTTTCTGTACCTATGAAAATAAATCATCCCTTTCGCTGCATGATCTGCTCTGCATGATTAGGGTGAAAATCACCCTATTCCACCCTTTCTCAACAGTGATTTGTGGGGCTTCTTTATTTTTTTGGAGACATTTATATATATTTGATTTTCTAAACTTTTTACTCCAGGGATGGCCAATGGGAGACATTTATTGATTGATTTTTTTTACATGGGAACATGTAATGTAATATAAAGGATAAAAAAAGTGAAAAAAAGAATTGATTTGGAGGCAGAAGCATGATGTAAGGAGGATAGGAACCTTATTGAACTGCATGGAGTGTGTGTTGCTTAGTTTTTATCACATTAACAATATAGAATTGTAAACTTGACACATTTGTTCATTAGCAAAGCCTTGGTGAACATGTTTTGAAACTTCTTCTCTTCTCTTGTTTTTTTGTTTTTGTTTTTGTTTTTATCAAATTTGCACGTCCTCGTTCATGACTCATCCTCCATAAATGTGTGCACCACAACAGAGACGAACCAGACTCCAACCTCCTAAAGGTGCTGATGACGGATCCTCCAGTTCTTTCATCAATCAAAGTCAGGAAACCAGGACAGATGGTCAAAATATATTGCAAACACTCGGGGGTCAAGGTTCTGCTGTTAATTTGATAAATGCTGATAGGCCTCAGCGACCCTTGCCCACCAGCGGTAGTCAGATTGATGTGGCGGGTTTAATGTCTCAGGCTCTAAATAGTCCTGCTTTGAATGGTTTGTTGGAAGGGTTTTCACAGCAAACGGGAGTTGACTCACCTGATGGCTTAAGGAGCATGTTGCAACAGTTCACACAAAGCCCGCAGATGATGAACACTGTCAGTCAGATTGCCCAGCAGGTTGGCAGTCAGGATATGGGGAATATGTTAACCGGAACGGAAGGAGGGCAGAGGGGTGGTGTTGACCTCTCAAGGATGCTTCAACAGATGATGCCCATTGTATCACAAGCCCTTGGTGGGGGAAATCCTCCACCACTATTCTCTGCTACAGAACCAGAAAGCCCACAGATGAACATGGTCAGCCCGATTGCCCAGCAGGTTGACAGTCAGGATATGGGGAATATGCTAACTGGAACGGAAACAGGGCAGGGTGGTGGTCTCGACTTCTCAAGGATGTTTCAACAGATGATGCCCATGATACAAGCTCTCGGAGGGGGAAATCCTCCACCACTATTCTCTGCTGCAGAGCCAGAAACCCGTGCACCCTACGGGAATGAAAATTCTGATAATCGAAGTTTGCAGGTTTGTATGCATGTACTTACAAAAAAGGCATAGTTTATTATTGCATTTGCATGTTATGTTTATTTATTTTGGTTACTTATTTTGGCATTAGATGAAACTGAAAGTCCTTTTCAGCTCATACTGTTCTACTTGAAGCTTTAAGTGTATTATGTAGATAAATATATCGTTTCATTCATAGGGTGAGCATTAGCTGCAAGTTGGCTGGCAGCTAATGCTTAGGCTTTGTTTGGGAGTTTGGAGGGGAAGGGAGGGGAGGGCTTTGGGGGGTTGGAAATATATAGAAAAATGGACAAAAAATTCACATTTTTTGAAAAAACAGTTTTTTAGAGAATGATAAACTAATACTTATGATTAATATACTTTTAATTTTAAGAATATTATAACAACATAGATTGAATTTGAAAAATTCATATAAACCCTCCATAACCCCCCAAAACCCTCCCCCAATACAATTTTTGAGTTCCCCCAAATGAGGGGGATTTTTTATTATGAGTAAAAAATTAACCTCCAAAGCCCTCTCCTCTCAATGTCTTCTATTTCTTCCACTTGCTCCTTCCTTTTTTCCAAAACCCTCCCCTCCAAACTCCCAAACAAAGCCTAAGTGTTTGTCCTGTAAACCAACCCCTCTAGGGCTGTAAACTTTCAGGCCTGTTTGACATAGTTGGCTGGCCTTTTAGCCTGTAAACTGACCCTTCTACGTCTCTTAATTTTTCTTTATCGTTAGATGATTCAAAAATATTTTGGACTAAGATCATTAATAAATATCTGCCTCACTAGTTGTAAGTAAACATAAACTTATGCTATTATAGTCGTTCTATTGTGACTGTTACCTTCTTTCTCCAGGTTGACCTTCAACCAGTGGCTGATAGGATTGATCGCCTGAGTCCACCTACAGATATCTTCCGTGCTGTAGCTGAAAATGCAGTCCAGCTGTCTAGCAGTGAAAGGGCTTCTGATGATCTTTTGGATGAGTTATGTTGCAACGAGAGTCTTGCCGGCGTAAGTTTATGTTTGTATACTTTGGTGTTTGAATTGCTGATACGCAGTCTACTTTTATTCTCTTGCTTGATTGTTTTGTTTGTGCACAATCACATCAAAAATTTAATTTCTTTCTTGTACAGGAATATTTGGAGATGTTGCGATCTGATGTAAGTAAGCTGCTCGAAGGACGTTCTGGGAGGGACAAGTCCTAA

Protein sequence

>MS.gene27108.t1

MANQSSNEGSSSSTNVSEQQDSTLLHLNIKTLDSRIYTFQVDKNMPVSLFKDKIATEVGLPVNQQRLIFRGKVLKDEHLLSHYHVENGHTLHLVERQPNQTHTPATGSGSETASANSNRGNNVGSGAPRSRVGQISHSVVLGTINVGDQGGEGISQDITRVIGAVLNSFANGGQGTMNAPNSAQTSSAPPGNETEGNQAGNQAPSGQAFQPFPHVVQIPMAAGAIPVPSFNAPIPHSLNTLSVFINRMEHALSQNGYGPNISSTNLGDQRAELPSNTQGLPTLEALTTVLHRTEQLLSGQAVSALSHIAGRMEREGTSADLGVRGQIQSESVQIGIAMQHLGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGGPLSSSTPATLGPVGVGSAPRNVNIHIHAGASLAPIVSAIGSRPNNGEGTRTEHRSEPGSGDSGSTRGLPVRNVIPATLPSNPSGIGAAGSTPSGFSISTSQLPPDSAPLSSVLAEIQSHLRNSVGNMQGDSTILSGQMQSTSRDLSSGSEPRPEQVNEQRDTAEMSGRGASGVSSVGCTSESGVEKTQTEAIKTCSNDERDVLVDKFVSSSSNQDLQSCSSGEAAVKSEKVQDAPSSSERRDVTEPAKTAPLGLGMSGLERKRRTRLQPPKGADDGSSSSFINQSQETRTDGQNILQTLGGQGSAVNLINADRPQRPLPTSGSQIDVAGLMSQALNSPALNGLLEGFSQQTGVDSPDGLRSMLQQFTQSPQMMNTVSQIAQQVGSQDMGNMLTGTEGGQRGGVDLSRMLQQMMPIVSQALGGGNPPPLFSATEPESPQMNMVSPIAQQVDSQDMGNMLTGTETGQGGGLDFSRMFQQMMPMIQALGGGNPPPLFSAAEPETRAPYGNENSDNRSLQVDLQPVADRIDRLSPPTDIFRAVAENAVQLSSSERASDDLLDELCCNESLAGEYLEMLRSDVSKLLEGRSGRDKS