AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27127

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27127.t1 MTR_6g045183 86.458 768 83 2 1 747 1 768 0.0 1252
MS.gene27127.t1 MTR_2g091260 65.074 879 172 9 2 747 1 877 0.0 1000
MS.gene27127.t1 MTR_2g091105 54.722 720 251 10 55 746 15 687 0.0 623
MS.gene27127.t1 MTR_2g091090 52.180 757 247 10 1 746 1 653 0.0 616
MS.gene27127.t1 MTR_2g091245 52.983 704 264 10 55 747 14 661 0.0 554
MS.gene27127.t1 MTR_2g091370 44.070 860 342 16 2 745 1 837 0.0 553
MS.gene27127.t1 MTR_2g091240 58.088 544 184 4 203 746 91 590 1.35e-179 526
MS.gene27127.t1 MTR_2g091240 29.839 372 177 10 46 400 10 314 8.20e-18 88.2
MS.gene27127.t1 MTR_2g091290 44.486 798 311 13 57 727 26 818 2.27e-178 531
MS.gene27127.t1 MTR_5g078510 61.066 488 176 2 266 746 65 545 1.92e-177 519
MS.gene27127.t1 MTR_5g078510 37.634 186 74 5 328 471 1 186 1.23e-12 71.6
MS.gene27127.t1 MTR_2g091250 51.077 650 240 9 169 747 653 1295 5.51e-161 499
MS.gene27127.t1 MTR_2g091250 44.259 479 198 8 6 465 18 446 3.38e-85 294
MS.gene27127.t1 MTR_2g091250 44.000 225 112 1 256 466 377 601 1.84e-35 145
MS.gene27127.t1 MTR_2g091250 36.782 348 160 6 175 472 340 677 1.46e-30 129
MS.gene27127.t1 MTR_2g091250 41.256 223 124 1 250 465 476 698 7.02e-30 127
MS.gene27127.t1 MTR_2g091250 37.241 290 175 3 203 492 509 791 6.62e-29 124
MS.gene27127.t1 MTR_2g091250 36.087 230 144 1 237 466 585 811 8.28e-25 111
MS.gene27127.t1 MTR_2g091330 53.488 602 134 13 2 467 1 592 1.24e-159 476
MS.gene27127.t1 MTR_2g091335 49.233 652 273 12 2 643 1 604 7.16e-158 471
MS.gene27127.t1 MTR_2g091110 50.791 632 227 6 150 746 719 1301 5.83e-153 479
MS.gene27127.t1 MTR_2g091110 37.009 535 221 12 47 505 2 496 3.24e-59 218
MS.gene27127.t1 MTR_2g091110 41.892 222 115 1 258 465 632 853 1.44e-30 129
MS.gene27127.t1 MTR_2g091110 33.159 383 191 10 154 495 409 767 6.64e-28 121
MS.gene27127.t1 MTR_2g091110 32.143 392 196 5 141 472 227 608 9.98e-28 120
MS.gene27127.t1 MTR_2g091110 33.945 327 170 7 201 499 378 686 1.13e-22 104
MS.gene27127.t1 MTR_2g091080 43.563 769 249 9 50 646 6 761 1.09e-151 460
MS.gene27127.t1 MTR_2g091030 49.321 663 240 13 2 643 1 588 4.06e-145 438
MS.gene27127.t1 MTR_2g091285 45.482 653 274 11 5 643 5 589 4.55e-141 427
MS.gene27127.t1 MTR_2g010420 44.518 602 308 9 159 746 250 839 7.75e-133 414
MS.gene27127.t1 MTR_2g010420 31.130 469 231 6 57 466 25 460 5.18e-37 149
MS.gene27127.t1 MTR_2g104190 41.748 721 286 15 2 688 1 621 2.02e-118 370
MS.gene27127.t1 MTR_5g038810 42.150 586 238 9 74 659 14 498 2.21e-116 365
MS.gene27127.t1 MTR_2g091015 54.386 399 169 3 258 656 496 881 6.16e-116 371
MS.gene27127.t1 MTR_2g091015 37.062 599 215 17 5 480 5 564 3.22e-58 213
MS.gene27127.t1 MTR_2g091025 46.993 449 219 3 266 704 137 576 1.70e-114 358
MS.gene27127.t1 MTR_3g110385 41.850 638 278 11 164 747 215 813 4.16e-112 359
MS.gene27127.t1 MTR_3g110385 33.806 423 208 8 97 471 34 432 1.20e-38 154
MS.gene27127.t1 MTR_2g091040 45.920 527 176 9 1 522 1 423 1.50e-107 338
MS.gene27127.t1 MTR_2g091040 65.385 104 36 0 643 746 422 525 3.38e-35 141
MS.gene27127.t1 MTR_2g091325 42.933 566 227 12 1 477 1 559 2.30e-98 316
MS.gene27127.t1 MTR_2g093010 48.500 400 191 3 266 665 457 841 1.35e-92 308
MS.gene27127.t1 MTR_2g093010 37.597 516 219 13 1 474 1 455 2.29e-61 222
MS.gene27127.t1 MTR_2g093010 48.500 400 191 3 266 665 456 840 1.38e-92 308
MS.gene27127.t1 MTR_2g093010 37.476 515 219 13 2 474 1 454 1.56e-60 219
MS.gene27127.t1 MTR_2g091010 38.117 648 261 13 2 518 1 639 2.05e-92 305
MS.gene27127.t1 MTR_2g091010 58.654 104 42 1 642 745 634 736 6.90e-27 117
MS.gene27127.t1 MTR_2g091315 40.853 563 184 12 2 472 1 506 1.89e-90 295
MS.gene27127.t1 MTR_2g091315 37.931 174 100 2 239 407 383 553 6.92e-16 82.0
MS.gene27127.t1 MTR_2g010420 39.679 499 276 8 159 643 250 737 7.58e-81 273
MS.gene27127.t1 MTR_2g010420 31.130 469 231 6 57 466 25 460 8.84e-37 148
MS.gene27127.t1 MTR_5g078500 47.397 365 119 8 2 354 1 304 6.73e-78 253
MS.gene27127.t1 MTR_2g091070 59.804 204 82 0 501 704 6 209 5.60e-70 228
MS.gene27127.t1 MTR_2g091280 41.700 506 221 12 5 461 5 485 1.30e-67 237
MS.gene27127.t1 MTR_2g091280 35.598 368 164 6 164 472 365 718 3.16e-32 134
MS.gene27127.t1 MTR_2g091280 37.500 304 166 6 176 469 321 610 3.10e-26 115
MS.gene27127.t1 MTR_2g091280 36.877 301 132 5 222 492 308 580 6.92e-25 110
MS.gene27127.t1 MTR_2g090980 48.496 266 129 1 407 672 288 545 8.44e-64 223
MS.gene27127.t1 MTR_2g103640 46.780 295 128 5 324 616 86 353 1.48e-59 205
MS.gene27127.t1 MTR_2g103640 31.295 278 135 5 87 363 2 224 1.69e-19 91.3
MS.gene27127.t1 MTR_2g103620 42.342 333 143 5 315 643 91 378 1.88e-58 203
MS.gene27127.t1 MTR_2g103620 31.502 273 134 6 77 344 4 228 2.23e-17 85.1
MS.gene27127.t1 MTR_2g091005 32.975 558 210 12 2 444 1 509 8.36e-51 187
MS.gene27127.t1 MTR_2g091005 42.718 103 37 2 645 747 530 610 6.45e-14 75.9
MS.gene27127.t1 MTR_7g056313 39.071 366 187 5 87 452 40 369 1.65e-49 178
MS.gene27127.t1 MTR_7g056313 35.963 431 171 12 5 396 5 369 9.61e-42 156
MS.gene27127.t1 MTR_8g467200 36.096 374 212 6 386 738 32 399 1.37e-41 159
MS.gene27127.t1 MTR_4g046660 46.581 234 118 3 511 741 446 675 3.28e-39 155
MS.gene27127.t1 MTR_8g107320 41.743 218 80 5 429 643 36 209 1.18e-36 137
MS.gene27127.t1 MTR_4g084930 61.856 97 35 2 645 741 37 131 1.04e-29 115
MS.gene27127.t1 MTR_2g090640 32.500 400 226 11 202 571 130 515 1.75e-27 118
MS.gene27127.t1 MTR_8g106540 32.593 270 147 6 377 643 47 284 6.59e-26 108
MS.gene27127.t1 MTR_7g056317 71.134 97 27 1 560 656 1 96 9.42e-25 99.8
MS.gene27127.t1 MTR_4g084920 57.143 98 39 2 483 578 195 291 6.50e-23 100
MS.gene27127.t1 MTR_4g095080 27.237 257 160 6 512 745 189 441 1.61e-17 87.0
MS.gene27127.t1 MTR_3g056070 30.000 190 127 3 553 741 172 356 6.25e-14 75.5
MS.gene27127.t1 MTR_2g091360 40.602 133 62 2 315 447 44 159 2.90e-12 68.9
MS.gene27127.t1 MTR_2g091360 36.364 143 80 2 257 399 36 167 3.26e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27127.t1 AT5G27220 26.606 218 150 4 511 725 861 1071 8.13e-14 76.3
MS.gene27127.t1 AT5G27220 25.105 474 305 12 202 640 342 800 1.11e-11 69.3
MS.gene27127.t1 AT5G27220 26.606 218 150 4 511 725 861 1071 8.13e-14 76.3
MS.gene27127.t1 AT5G27220 25.105 474 305 12 202 640 342 800 1.11e-11 69.3
MS.gene27127.t1 AT5G48385 24.542 273 186 5 493 746 185 456 9.49e-12 68.9
MS.gene27127.t1 AT5G27220 25.319 470 309 11 202 640 342 800 9.49e-12 69.3
MS.gene27127.t1 AT5G27220 25.319 470 309 11 202 640 342 800 9.49e-12 69.3

Find 111 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCAATATCTCTCTTTA+TGG 0.097305 6.2:-50523074 None:intergenic
GGCTTTGCAAATAAAGTTTC+TGG 0.144689 6.2:+50525015 MS.gene27127:CDS
TACAAATCAGTTTCGCATTC+TGG 0.162033 6.2:-50526424 None:intergenic
TGAAATTTACAACAAAATAT+TGG 0.213745 6.2:+50523153 MS.gene27127:CDS
TACATCAACCTCTTTCTCTT+TGG 0.259964 6.2:-50523251 None:intergenic
CTTCTGCTTCTGTCAATATA+TGG 0.262163 6.2:+50524901 MS.gene27127:CDS
AGATCCATCTAGACTTGTTT+TGG 0.287421 6.2:+50524669 MS.gene27127:CDS
GAGTCAAAGCTGAACAAATT+TGG 0.292587 6.2:+50523907 MS.gene27127:CDS
GCAGCTTGAAGGCCAGAAAA+AGG 0.319865 6.2:+50523627 MS.gene27127:CDS
GAAATTTACAACAAAATATT+GGG 0.323941 6.2:+50523154 MS.gene27127:CDS
ATATTCTCCGAGTTCAAGTT+TGG 0.326157 6.2:+50522763 MS.gene27127:CDS
GAAGCAGATCCTCAGATTCT+AGG 0.330062 6.2:-50526655 None:intergenic
AGATCAAGAAATCGCTAGTC+TGG 0.335747 6.2:+50526601 MS.gene27127:CDS
CCGAAGAAGCCTGAGTTAAC+AGG 0.347686 6.2:+50523937 MS.gene27127:CDS
TTATCAAACAACCTCTTAAC+TGG 0.355392 6.2:-50522848 None:intergenic
GCGACTTGAAGGTCATATTA+AGG 0.356638 6.2:+50523375 MS.gene27127:CDS
AAACGAACATAAAGGCAAAT+AGG 0.360837 6.2:+50526709 MS.gene27127:CDS
CCTGTTAACTCAGGCTTCTT+CGG 0.362022 6.2:-50523937 None:intergenic
TCATGATACGGTGACATCTT+TGG 0.373925 6.2:-50522902 None:intergenic
AAAAGTTGCTGAATGTAATC+TGG 0.380835 6.2:+50523219 MS.gene27127:CDS
TTCTTACACAGTGGAGTGCC+GGG 0.389367 6.2:-50524706 None:intergenic
CGTACACAAGGTTTAATAGT+TGG 0.390627 6.2:-50524796 None:intergenic
ATTTCCAAAACAAGTCTAGA+TGG 0.395227 6.2:-50524673 None:intergenic
GCAAGTTGAAGGACGAGAAA+TGG 0.399180 6.2:+50523585 MS.gene27127:CDS
CTTTAGTAACTGCTTCCTTT+CGG 0.405060 6.2:-50523314 None:intergenic
GGAACTTGAAAATCATATAA+AGG 0.412247 6.2:+50523543 MS.gene27127:CDS
GCTCAAATGAAGCGACTTGA+AGG 0.418905 6.2:+50523364 MS.gene27127:CDS
TCGAAGGAGAAGTACTTAGA+AGG 0.422549 6.2:+50523448 MS.gene27127:CDS
GTTCGTTTAGCTCATGAATA+CGG 0.436104 6.2:-50526694 None:intergenic
TCAAAGTCCTCACAAGAAAC+AGG 0.437023 6.2:-50522701 None:intergenic
TATGGAGCTGTTTGAGACCC+TGG 0.438859 6.2:+50524993 MS.gene27127:CDS
GATGGGAACTTAAATGCTAA+AGG 0.439157 6.2:+50522629 MS.gene27127:CDS
AGAGAGATATTGAAGAATGT+TGG 0.441441 6.2:+50523080 MS.gene27127:CDS
TATTCTCCGAGTTCAAGTTT+GGG 0.447098 6.2:+50522764 MS.gene27127:CDS
CTTGAACTCGGAGAATATCT+TGG 0.448365 6.2:-50522758 None:intergenic
CTTCTTACACAGTGGAGTGC+CGG 0.448871 6.2:-50524707 None:intergenic
TCAAAAGAGATGCAGCTTGA+AGG 0.459792 6.2:+50523616 MS.gene27127:CDS
CTCTTCTTAACAGAAACATC+AGG 0.468989 6.2:-50522803 None:intergenic
AACTAACTCAATTGAAATCA+AGG 0.469031 6.2:+50526463 MS.gene27127:CDS
TCAATTCATGCTCCTTCACT+CGG 0.469446 6.2:-50523681 None:intergenic
TTAAGAAATGCAAAAGGAAG+AGG 0.472582 6.2:+50523026 MS.gene27127:CDS
CATGAGCTAAACGAACATAA+AGG 0.475448 6.2:+50526701 MS.gene27127:CDS
TTTCTTAACAGAAATGTTCA+AGG 0.479459 6.2:-50522879 None:intergenic
TTCCCTCATCACATCTGAAT+GGG 0.479678 6.2:-50522678 None:intergenic
AGAACTCGAAGGTCGAGTTA+AGG 0.480507 6.2:+50523711 MS.gene27127:CDS
ATGGGAACTTAAATGCTAAA+GGG 0.482449 6.2:+50522630 MS.gene27127:CDS
ATGGAGCTGTTTGAGACCCT+GGG 0.482722 6.2:+50524994 MS.gene27127:CDS
ATACTACACTGCCAGTTAAG+AGG 0.487504 6.2:+50522837 MS.gene27127:CDS
TAGTGTTTCCCTGTTAACTC+AGG 0.494437 6.2:-50523946 None:intergenic
AGAGAATCAATTCAAAGTAA+AGG 0.495255 6.2:+50523831 MS.gene27127:CDS
AAAGGAGTTGGAATTAAAAG+AGG 0.497111 6.2:+50523645 MS.gene27127:CDS
ATTCAGCTGTGCATATAACT+TGG 0.497248 6.2:+50526361 MS.gene27127:CDS
GTTCCCTCATCACATCTGAA+TGG 0.497529 6.2:-50522679 None:intergenic
CGGCACTCCACTGTGTAAGA+AGG 0.497985 6.2:+50524708 MS.gene27127:CDS
TTGATTTGAAATACTCAACT+TGG 0.512958 6.2:-50523765 None:intergenic
AAACTTTATTTGCAAAGCCC+AGG 0.517429 6.2:-50525011 None:intergenic
GGAAGAGGGAAGTAGAAGAG+AGG 0.527909 6.2:+50523041 MS.gene27127:CDS
AGAGAATCTGTGCAATGGAC+GGG 0.530647 6.2:+50523411 MS.gene27127:CDS
CGAAAGGAAGCAGTTACTAA+AGG 0.530759 6.2:+50523315 MS.gene27127:CDS
TAAGAAATGCAAAAGGAAGA+GGG 0.531392 6.2:+50523027 MS.gene27127:CDS
AATTGTTTAAGAAATGCAAA+AGG 0.532167 6.2:+50523020 MS.gene27127:CDS
ATTGGGAAAAGTTGAAAGCA+AGG 0.539892 6.2:+50523171 MS.gene27127:CDS
TCTGTGCAATGGACGGGTGG+AGG 0.545829 6.2:+50523417 MS.gene27127:CDS
ACTTAAGTCCAAAGAGAAAG+AGG 0.545905 6.2:+50523243 MS.gene27127:CDS
AACTTTATTTGCAAAGCCCA+GGG 0.547664 6.2:-50525010 None:intergenic
CTGATGTTTCTGTTAAGAAG+AGG 0.551021 6.2:+50522804 MS.gene27127:CDS
TCAATTCAAAGTAAAGGAGA+AGG 0.554204 6.2:+50523837 MS.gene27127:CDS
TGCTCAGCACAAGACAGCTA+TGG 0.554357 6.2:+50524975 MS.gene27127:CDS
AAGAGAATCTGTGCAATGGA+CGG 0.555830 6.2:+50523410 MS.gene27127:CDS
CGAAGGTCGAGTTAAGGAGA+TGG 0.560126 6.2:+50523717 MS.gene27127:CDS
GCAGATTGAAGTACAAGTCA+AGG 0.561383 6.2:+50523879 MS.gene27127:CDS
TGATGTTTCTGTTAAGAAGA+GGG 0.562050 6.2:+50522805 MS.gene27127:CDS
GATCAAGAAATCGCTAGTCT+GGG 0.562784 6.2:+50526602 MS.gene27127:CDS
CGGAAATATTAGAGTCCGAA+AGG 0.563570 6.2:+50523299 MS.gene27127:CDS
TCAAGAGCGAAGCAGATGAA+AGG 0.564494 6.2:+50523490 MS.gene27127:CDS
GTACTTAGAAGGACAACTAA+AGG 0.565254 6.2:+50523459 MS.gene27127:CDS
TTTGTGTTGGTGATGATGAT+GGG 0.570871 6.2:+50522612 MS.gene27127:CDS
CATATTCCCAAACTTGAACT+CGG 0.573923 6.2:-50522770 None:intergenic
GTAATGAAAATATTAATTAG+CGG 0.577428 6.2:+50523271 MS.gene27127:CDS
CATCCCATTCAGATGTGATG+AGG 0.582634 6.2:+50522675 MS.gene27127:CDS
CGAAGAAGCCTGAGTTAACA+GGG 0.584765 6.2:+50523938 MS.gene27127:CDS
AACAGTTTAAGTCAATGAAG+AGG 0.585785 6.2:+50523521 MS.gene27127:CDS
TAGTAGAACAAGTTTGCAGT+TGG 0.588424 6.2:+50524576 MS.gene27127:CDS
GGCACTCCACTGTGTAAGAA+GGG 0.589889 6.2:+50524709 MS.gene27127:CDS
GGTGGAGGAACTTGAGTCGA+AGG 0.591983 6.2:+50523432 MS.gene27127:CDS
TCAAAAGAGAATCTGTGCAA+TGG 0.596894 6.2:+50523406 MS.gene27127:CDS
ATATGCAGTTGCATCTCACA+TGG 0.598801 6.2:+50524531 MS.gene27127:intron
AATATTAATTAGCGGACAAG+CGG 0.601647 6.2:+50523279 MS.gene27127:CDS
TCAAAGCTGAACAAATTTGG+CGG 0.605623 6.2:+50523910 MS.gene27127:CDS
ACAGTTTAAGTCAATGAAGA+GGG 0.606615 6.2:+50523522 MS.gene27127:CDS
TCTTCGCCGTGATCATGATA+CGG 0.607679 6.2:-50522914 None:intergenic
AGACAACAGCCTAGAATCTG+AGG 0.608679 6.2:+50526646 MS.gene27127:CDS
AAGCAAGGAAGAAGAACTCA+AGG 0.609312 6.2:+50523186 MS.gene27127:CDS
CTGCAAACTTGTTCTACTAG+TGG 0.609575 6.2:-50524572 None:intergenic
ACGATACACAATTTGAAGAA+CGG 0.610709 6.2:+50523788 MS.gene27127:CDS
ATCCCATTCAGATGTGATGA+GGG 0.610719 6.2:+50522676 MS.gene27127:CDS
GAGGGAACCTGTTTCTTGTG+AGG 0.612930 6.2:+50522694 MS.gene27127:CDS
AAAATGGGAAGGCCGAGTGA+AGG 0.620364 6.2:+50523669 MS.gene27127:CDS
GGAGAATATCTTGGTGACAC+AGG 0.622505 6.2:-50522749 None:intergenic
GTGGCTATCATCAATAATCA+CGG 0.622761 6.2:-50524740 None:intergenic
TCTTACACAGTGGAGTGCCG+GGG 0.627543 6.2:-50524705 None:intergenic
ATCTGAGGATCTGCTTCGCG+AGG 0.629635 6.2:+50526661 MS.gene27127:CDS
GAATCTGTGCAATGGACGGG+TGG 0.631820 6.2:+50523414 MS.gene27127:CDS
GTTCTTCTAACAGATAGATG+TGG 0.646254 6.2:-50524759 None:intergenic
ATGTCACCGTATCATGATCA+CGG 0.647784 6.2:+50522908 MS.gene27127:CDS
ATACACAATTTGAAGAACGG+TGG 0.661848 6.2:+50523791 MS.gene27127:CDS
ACTTGAAAATCATATAAAGG+AGG 0.666678 6.2:+50523546 MS.gene27127:CDS
GTTGAAGCTAGCGCATGATG+TGG 0.671688 6.2:+50524828 MS.gene27127:CDS
TTGGAAATAATACTGAACCC+CGG 0.687236 6.2:+50524688 MS.gene27127:CDS
TAAAGGGCTCAATTCATGTG+AGG 0.687414 6.2:+50522646 MS.gene27127:CDS
TTGAAAGCAGAAGAACTCGA+AGG 0.687468 6.2:+50523700 MS.gene27127:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTTAAATATATTATC+AGG + chr6.2:50526312-50526331 MS.gene27127:CDS 10.0%
!!! TAATTTAAAATTATTGACTT+TGG - chr6.2:50526065-50526084 None:intergenic 10.0%
!! GAAATTTACAACAAAATATT+GGG + chr6.2:50523154-50523173 MS.gene27127:CDS 15.0%
!! GTAATGAAAATATTAATTAG+CGG + chr6.2:50523271-50523290 MS.gene27127:CDS 15.0%
!! TGAAATTTACAACAAAATAT+TGG + chr6.2:50523153-50523172 MS.gene27127:CDS 15.0%
!! TTTACTCATTTAATCATTTA+TGG + chr6.2:50525178-50525197 MS.gene27127:intron 15.0%
!!! ATTTTTTTTTGGGTTATATT+TGG - chr6.2:50525728-50525747 None:intergenic 15.0%
!!! TATCTTCATTTATTTAGTTT+TGG + chr6.2:50524325-50524344 MS.gene27127:intron 15.0%
!! AAAGCATAATGATAAAAGAA+GGG - chr6.2:50525078-50525097 None:intergenic 20.0%
!! AATTGTTTAAGAAATGCAAA+AGG + chr6.2:50523020-50523039 MS.gene27127:CDS 20.0%
!! AGAGAATACTAAAAATTCTT+CGG + chr6.2:50524864-50524883 MS.gene27127:CDS 20.0%
!! ATTATAAGTAAAATCTTTGC+AGG + chr6.2:50526081-50526100 MS.gene27127:intron 20.0%
!! TATATTTAACAAAATCTGCA+AGG - chr6.2:50526307-50526326 None:intergenic 20.0%
!! TTATTTATGACTATCATGAA+GGG - chr6.2:50526548-50526567 None:intergenic 20.0%
!! TTTATTTATGACTATCATGA+AGG - chr6.2:50526549-50526568 None:intergenic 20.0%
!!! CATTTCAGAGATTTTTTTTT+GGG - chr6.2:50525738-50525757 None:intergenic 20.0%
!!! TATGTTAGTATAGAATGTTT+TGG + chr6.2:50525038-50525057 MS.gene27127:intron 20.0%
!!! TCATTTCAGAGATTTTTTTT+TGG - chr6.2:50525739-50525758 None:intergenic 20.0%
! AAAAAAAAGGAATCAGTTCA+AGG + chr6.2:50525998-50526017 MS.gene27127:intron 25.0%
! AACTAACTCAATTGAAATCA+AGG + chr6.2:50526463-50526482 MS.gene27127:CDS 25.0%
! ACTTGAAAATCATATAAAGG+AGG + chr6.2:50523546-50523565 MS.gene27127:CDS 25.0%
! AGAGAATCAATTCAAAGTAA+AGG + chr6.2:50523831-50523850 MS.gene27127:CDS 25.0%
! AGAGATTCATAAAATGTTCA+AGG - chr6.2:50524133-50524152 None:intergenic 25.0%
! ATCAGAAAAACATATTGACA+AGG + chr6.2:50523975-50523994 MS.gene27127:CDS 25.0%
! ATGAATCCTTTCAAGAAAAT+AGG + chr6.2:50526021-50526040 MS.gene27127:intron 25.0%
! CAAAGCATAATGATAAAAGA+AGG - chr6.2:50525079-50525098 None:intergenic 25.0%
! GAGATTCATAAAATGTTCAA+GGG - chr6.2:50524132-50524151 None:intergenic 25.0%
! GGAACTTGAAAATCATATAA+AGG + chr6.2:50523543-50523562 MS.gene27127:CDS 25.0%
! GGAATTAAAAGAGGAAAAAT+GGG + chr6.2:50523654-50523673 MS.gene27127:CDS 25.0%
! TAATCATTTATGGTAGATGT+GGG + chr6.2:50525188-50525207 MS.gene27127:intron 25.0%
! TATTGACAAGGAAAAAGAAT+CGG + chr6.2:50523987-50524006 MS.gene27127:CDS 25.0%
! TATTTATGACTATCATGAAG+GGG - chr6.2:50526547-50526566 None:intergenic 25.0%
! TGGAATTAAAAGAGGAAAAA+TGG + chr6.2:50523653-50523672 MS.gene27127:CDS 25.0%
! TTAATCATTTATGGTAGATG+TGG + chr6.2:50525187-50525206 MS.gene27127:intron 25.0%
! TTATAATTAAACCTTAGCCA+TGG - chr6.2:50524184-50524203 None:intergenic 25.0%
! TTCTTCAATATCTCTCTTTA+TGG - chr6.2:50523077-50523096 None:intergenic 25.0%
! TTTCTTAACAGAAATGTTCA+AGG - chr6.2:50522882-50522901 None:intergenic 25.0%
!! AAGATTTAAGATTTAGCTGT+TGG + chr6.2:50526121-50526140 MS.gene27127:intron 25.0%
!! ATTACATTCAGCAACTTTTT+GGG - chr6.2:50523218-50523237 None:intergenic 25.0%
!! CTTCTTTTATCATTATGCTT+TGG + chr6.2:50525077-50525096 MS.gene27127:intron 25.0%
!! GTAATTAGTTGGATACATTT+TGG + chr6.2:50525363-50525382 MS.gene27127:intron 25.0%
!! GTGTTTTCTCAAATAATTAG+TGG - chr6.2:50525479-50525498 None:intergenic 25.0%
!! TCAAAAAATAAGCAAGTTGA+AGG + chr6.2:50523574-50523593 MS.gene27127:CDS 25.0%
!! TTGATTTGAAATACTCAACT+TGG - chr6.2:50523768-50523787 None:intergenic 25.0%
!!! ATAAAAGCATCGTTTAATGA+AGG - chr6.2:50524472-50524491 None:intergenic 25.0%
!!! CTTTCTGAGATTGAAATTTA+TGG - chr6.2:50524402-50524421 None:intergenic 25.0%
!!! TTTTGAGAAAATTGACATCT+TGG + chr6.2:50526208-50526227 MS.gene27127:intron 25.0%
AAAACAAATGTGAGAACTGT+TGG - chr6.2:50526192-50526211 None:intergenic 30.0%
AAAAGTTGCTGAATGTAATC+TGG + chr6.2:50523219-50523238 MS.gene27127:CDS 30.0%
AAAGGAGTTGGAATTAAAAG+AGG + chr6.2:50523645-50523664 MS.gene27127:CDS 30.0%
AACAGTTTAAGTCAATGAAG+AGG + chr6.2:50523521-50523540 MS.gene27127:CDS 30.0%
AATGAAGGTAACAATAGGAA+CGG - chr6.2:50524457-50524476 None:intergenic 30.0%
ACAGTTTAAGTCAATGAAGA+GGG + chr6.2:50523522-50523541 MS.gene27127:CDS 30.0%
ACGATACACAATTTGAAGAA+CGG + chr6.2:50523788-50523807 MS.gene27127:CDS 30.0%
AGAGAGATATTGAAGAATGT+TGG + chr6.2:50523080-50523099 MS.gene27127:CDS 30.0%
ATGGGAACTTAAATGCTAAA+GGG + chr6.2:50522630-50522649 MS.gene27127:CDS 30.0%
ATGTATCCAACTAATTACTG+TGG - chr6.2:50525361-50525380 None:intergenic 30.0%
ATTGACAAGGAAAAAGAATC+GGG + chr6.2:50523988-50524007 MS.gene27127:CDS 30.0%
ATTTCCAAAACAAGTCTAGA+TGG - chr6.2:50524676-50524695 None:intergenic 30.0%
CGTTTAATGAAGGTAACAAT+AGG - chr6.2:50524462-50524481 None:intergenic 30.0%
GCTGAAGCAGTATAAAAAAA+AGG + chr6.2:50525985-50526004 MS.gene27127:intron 30.0%
GGAGTCAAAAAATAAGCATT+TGG + chr6.2:50523738-50523757 MS.gene27127:CDS 30.0%
GTAAAACCACAGTAATTAGT+TGG + chr6.2:50525352-50525371 MS.gene27127:intron 30.0%
TAACAAAAAACTGAGCAGAT+TGG - chr6.2:50526257-50526276 None:intergenic 30.0%
TAAGAAATGCAAAAGGAAGA+GGG + chr6.2:50523027-50523046 MS.gene27127:CDS 30.0%
TCAATTCAAAGTAAAGGAGA+AGG + chr6.2:50523837-50523856 MS.gene27127:CDS 30.0%
TTAAAAGAGGAAAAATGGGA+AGG + chr6.2:50523658-50523677 MS.gene27127:CDS 30.0%
TTAAGAAATGCAAAAGGAAG+AGG + chr6.2:50523026-50523045 MS.gene27127:CDS 30.0%
TTATCAAACAACCTCTTAAC+TGG - chr6.2:50522851-50522870 None:intergenic 30.0%
TTCTCAAATAATTAGTGGTG+TGG - chr6.2:50525474-50525493 None:intergenic 30.0%
TTGAAATTTATGGCTGACAT+AGG - chr6.2:50524392-50524411 None:intergenic 30.0%
! AATATTAATTAGCGGACAAG+CGG + chr6.2:50523279-50523298 MS.gene27127:CDS 30.0%
! ACGATGCTTTTATCAATATG+AGG + chr6.2:50524479-50524498 MS.gene27127:intron 30.0%
! AGTTGTCCTATTTTCTTGAA+AGG - chr6.2:50526030-50526049 None:intergenic 30.0%
! CGATGCTTTTATCAATATGA+GGG + chr6.2:50524480-50524499 MS.gene27127:intron 30.0%
! GATTACATTCAGCAACTTTT+TGG - chr6.2:50523219-50523238 None:intergenic 30.0%
! GCTGAAAAATGAAGTTGATT+TGG + chr6.2:50522991-50523010 MS.gene27127:CDS 30.0%
! TGATGTTTCTGTTAAGAAGA+GGG + chr6.2:50522805-50522824 MS.gene27127:CDS 30.0%
! TTAATTCCAACTCCTTTTTC+TGG - chr6.2:50523642-50523661 None:intergenic 30.0%
! TTTTGATGAATGCGAAGTTT+TGG + chr6.2:50524936-50524955 MS.gene27127:CDS 30.0%
!! ATCAACTTCATTTTTCAGCA+AGG - chr6.2:50522990-50523009 None:intergenic 30.0%
!!! TGGTTGTTAGTCTTTTTTAC+CGG - chr6.2:50525306-50525325 None:intergenic 30.0%
!!! TTGAGTTAGTTTTCTCACAA+CGG - chr6.2:50526454-50526473 None:intergenic 30.0%
AAAAATTCTTCGGCTGTTCT+TGG + chr6.2:50524874-50524893 MS.gene27127:CDS 35.0%
AATGTGATTCAGATATGCTC+TGG - chr6.2:50525648-50525667 None:intergenic 35.0%
ACTTAAGTCCAAAGAGAAAG+AGG + chr6.2:50523243-50523262 MS.gene27127:CDS 35.0%
ATACACAATTTGAAGAACGG+TGG + chr6.2:50523791-50523810 MS.gene27127:CDS 35.0%
ATATGCTACTGTACTGCTAA+TGG + chr6.2:50524205-50524224 MS.gene27127:intron 35.0%
ATTCAGCTGTGCATATAACT+TGG + chr6.2:50526361-50526380 MS.gene27127:CDS 35.0%
ATTGGGAAAAGTTGAAAGCA+AGG + chr6.2:50523171-50523190 MS.gene27127:CDS 35.0%
ATTTACATCAAAGTCCCCTT+AGG + chr6.2:50525401-50525420 MS.gene27127:intron 35.0%
CATATTCCCAAACTTGAACT+CGG - chr6.2:50522773-50522792 None:intergenic 35.0%
CATGAGCTAAACGAACATAA+AGG + chr6.2:50526701-50526720 MS.gene27127:CDS 35.0%
CATTCATGTTGTATGAAGCA+CGG - chr6.2:50525592-50525611 None:intergenic 35.0%
CGTACACAAGGTTTAATAGT+TGG - chr6.2:50524799-50524818 None:intergenic 35.0%
CTCTTCTTAACAGAAACATC+AGG - chr6.2:50522806-50522825 None:intergenic 35.0%
CTTCTGCTTCTGTCAATATA+TGG + chr6.2:50524901-50524920 MS.gene27127:CDS 35.0%
CTTTAGTAACTGCTTCCTTT+CGG - chr6.2:50523317-50523336 None:intergenic 35.0%
GACATCTTGGTATTAATGCT+TGG + chr6.2:50526221-50526240 MS.gene27127:intron 35.0%
GAGTCAAAGCTGAACAAATT+TGG + chr6.2:50523907-50523926 MS.gene27127:CDS 35.0%
GATGGGAACTTAAATGCTAA+AGG + chr6.2:50522629-50522648 MS.gene27127:CDS 35.0%
GGCTTTGCAAATAAAGTTTC+TGG + chr6.2:50525015-50525034 MS.gene27127:CDS 35.0%
GTACTTAGAAGGACAACTAA+AGG + chr6.2:50523459-50523478 MS.gene27127:CDS 35.0%
GTGGCTATCATCAATAATCA+CGG - chr6.2:50524743-50524762 None:intergenic 35.0%
GTTCTTCTAACAGATAGATG+TGG - chr6.2:50524762-50524781 None:intergenic 35.0%
TACAAATCAGTTTCGCATTC+TGG - chr6.2:50526427-50526446 None:intergenic 35.0%
TACATCAACCTCTTTCTCTT+TGG - chr6.2:50523254-50523273 None:intergenic 35.0%
TAGTAGAACAAGTTTGCAGT+TGG + chr6.2:50524576-50524595 MS.gene27127:CDS 35.0%
TCAAAAGAGAATCTGTGCAA+TGG + chr6.2:50523406-50523425 MS.gene27127:CDS 35.0%
TCAAAGCTGAACAAATTTGG+CGG + chr6.2:50523910-50523929 MS.gene27127:CDS 35.0%
TGCACATACTTGCATATACT+TGG - chr6.2:50524262-50524281 None:intergenic 35.0%
TTGGAAATAATACTGAACCC+CGG + chr6.2:50524688-50524707 MS.gene27127:CDS 35.0%
TTTAAATCTCCCAAGAGTCT+AGG + chr6.2:50525803-50525822 MS.gene27127:intron 35.0%
! AAACTTTATTTGCAAAGCCC+AGG - chr6.2:50525014-50525033 None:intergenic 35.0%
! AACTCTTGCGTTTTTATCCA+TGG + chr6.2:50524164-50524183 MS.gene27127:intron 35.0%
! AACTTTATTTGCAAAGCCCA+GGG - chr6.2:50525013-50525032 None:intergenic 35.0%
! AAGTGAGTATTGTAGCAAAG+AGG - chr6.2:50525903-50525922 None:intergenic 35.0%
! ATATTCTCCGAGTTCAAGTT+TGG + chr6.2:50522763-50522782 MS.gene27127:CDS 35.0%
! CTGATGTTTCTGTTAAGAAG+AGG + chr6.2:50522804-50522823 MS.gene27127:CDS 35.0%
! GATAAGCGAAACTTTTGTGT+TGG + chr6.2:50522599-50522618 MS.gene27127:CDS 35.0%
! GTTCGTTTAGCTCATGAATA+CGG - chr6.2:50526697-50526716 None:intergenic 35.0%
! TATTCTCCGAGTTCAAGTTT+GGG + chr6.2:50522764-50522783 MS.gene27127:CDS 35.0%
!! ACTTGTTTTTCTTGACATGC+CGG + chr6.2:50525284-50525303 MS.gene27127:intron 35.0%
!! AGATCCATCTAGACTTGTTT+TGG + chr6.2:50524669-50524688 MS.gene27127:CDS 35.0%
!! CATTATCCCACTCTAAGATA+GGG + chr6.2:50525147-50525166 MS.gene27127:intron 35.0%
!! TTTGTGTTGGTGATGATGAT+GGG + chr6.2:50522612-50522631 MS.gene27127:CDS 35.0%
!!! TTTTGTGTTGGTGATGATGA+TGG + chr6.2:50522611-50522630 MS.gene27127:CDS 35.0%
AAGAGAATCTGTGCAATGGA+CGG + chr6.2:50523410-50523429 MS.gene27127:CDS 40.0%
AAGCAAGGAAGAAGAACTCA+AGG + chr6.2:50523186-50523205 MS.gene27127:CDS 40.0%
AATGCCAACTGTCATTCTCT+TGG - chr6.2:50525326-50525345 None:intergenic 40.0%
ACAACCAAGAGAATGACAGT+TGG + chr6.2:50525319-50525338 MS.gene27127:intron 40.0%
AGATCAAGAAATCGCTAGTC+TGG + chr6.2:50526601-50526620 MS.gene27127:CDS 40.0%
ATACTACACTGCCAGTTAAG+AGG + chr6.2:50522837-50522856 MS.gene27127:CDS 40.0%
ATATGCAGTTGCATCTCACA+TGG + chr6.2:50524531-50524550 MS.gene27127:intron 40.0%
ATCCCATTCAGATGTGATGA+GGG + chr6.2:50522676-50522695 MS.gene27127:CDS 40.0%
ATGTCACCGTATCATGATCA+CGG + chr6.2:50522908-50522927 MS.gene27127:CDS 40.0%
ATTGACACCCTATCTTAGAG+TGG - chr6.2:50525157-50525176 None:intergenic 40.0%
CAAATGTGAGAACTGTTGGA+TGG - chr6.2:50526188-50526207 None:intergenic 40.0%
CGAAAGGAAGCAGTTACTAA+AGG + chr6.2:50523315-50523334 MS.gene27127:CDS 40.0%
CGAGTTCAATGAAACATGCT+AGG - chr6.2:50525671-50525690 None:intergenic 40.0%
CGGAAATATTAGAGTCCGAA+AGG + chr6.2:50523299-50523318 MS.gene27127:CDS 40.0%
CTTGAACTCGGAGAATATCT+TGG - chr6.2:50522761-50522780 None:intergenic 40.0%
GATCTGAATGAACCTAGAAC+AGG - chr6.2:50525704-50525723 None:intergenic 40.0%
GCAGATTGAAGTACAAGTCA+AGG + chr6.2:50523879-50523898 MS.gene27127:CDS 40.0%
GCGACTTGAAGGTCATATTA+AGG + chr6.2:50523375-50523394 MS.gene27127:CDS 40.0%
TAAAGGGCTCAATTCATGTG+AGG + chr6.2:50522646-50522665 MS.gene27127:CDS 40.0%
TAGTGTTTCCCTGTTAACTC+AGG - chr6.2:50523949-50523968 None:intergenic 40.0%
TATATGTGTCAGTGTCGTGT+CGG + chr6.2:50525514-50525533 MS.gene27127:intron 40.0%
TCAAAAGAGATGCAGCTTGA+AGG + chr6.2:50523616-50523635 MS.gene27127:CDS 40.0%
TCAAAGTCCTCACAAGAAAC+AGG - chr6.2:50522704-50522723 None:intergenic 40.0%
TCAATTCATGCTCCTTCACT+CGG - chr6.2:50523684-50523703 None:intergenic 40.0%
TCATGATACGGTGACATCTT+TGG - chr6.2:50522905-50522924 None:intergenic 40.0%
TGCAGAAATCCTAGACTCTT+GGG - chr6.2:50525815-50525834 None:intergenic 40.0%
TTCCCTCATCACATCTGAAT+GGG - chr6.2:50522681-50522700 None:intergenic 40.0%
TTGAAAGCAGAAGAACTCGA+AGG + chr6.2:50523700-50523719 MS.gene27127:CDS 40.0%
TTGACACCCTATCTTAGAGT+GGG - chr6.2:50525156-50525175 None:intergenic 40.0%
! CTGCAAACTTGTTCTACTAG+TGG - chr6.2:50524575-50524594 None:intergenic 40.0%
! GAAGGGGTATATGTCTGAAA+TGG - chr6.2:50526531-50526550 None:intergenic 40.0%
! GATCAAGAAATCGCTAGTCT+GGG + chr6.2:50526602-50526621 MS.gene27127:CDS 40.0%
! TGCGTTTTTATCCATGGCTA+AGG + chr6.2:50524170-50524189 MS.gene27127:intron 40.0%
! TTTTCTCCCTTCTTACACAG+TGG - chr6.2:50524718-50524737 None:intergenic 40.0%
!! GCATTATCCCACTCTAAGAT+AGG + chr6.2:50525146-50525165 MS.gene27127:intron 40.0%
!! TCCTTGGATTAGAAGTGTTC+CGG - chr6.2:50525565-50525584 None:intergenic 40.0%
!! TCGAAGGAGAAGTACTTAGA+AGG + chr6.2:50523448-50523467 MS.gene27127:CDS 40.0%
!!! AACGCTTTTTCTCGTACACA+AGG - chr6.2:50524811-50524830 None:intergenic 40.0%
ACCGGAACACTTCTAATCCA+AGG + chr6.2:50525561-50525580 MS.gene27127:intron 45.0%
AGAACTCGAAGGTCGAGTTA+AGG + chr6.2:50523711-50523730 MS.gene27127:CDS 45.0%
AGACAACAGCCTAGAATCTG+AGG + chr6.2:50526646-50526665 MS.gene27127:CDS 45.0%
AGAGAATCTGTGCAATGGAC+GGG + chr6.2:50523411-50523430 MS.gene27127:CDS 45.0%
CATCCCATTCAGATGTGATG+AGG + chr6.2:50522675-50522694 MS.gene27127:CDS 45.0%
CCTGTTAACTCAGGCTTCTT+CGG - chr6.2:50523940-50523959 None:intergenic 45.0%
CGAAGAAGCCTGAGTTAACA+GGG + chr6.2:50523938-50523957 MS.gene27127:CDS 45.0%
CGCTTTCACTAACCTGTTCT+AGG + chr6.2:50525689-50525708 MS.gene27127:intron 45.0%
CTCTTTGTGCCTTCATCACT+TGG - chr6.2:50525857-50525876 None:intergenic 45.0%
CTTCGTAGTTCATGCCTAAG+GGG - chr6.2:50525418-50525437 None:intergenic 45.0%
GAAGCAGATCCTCAGATTCT+AGG - chr6.2:50526658-50526677 None:intergenic 45.0%
GCTCAAATGAAGCGACTTGA+AGG + chr6.2:50523364-50523383 MS.gene27127:CDS 45.0%
GCTTCGTAGTTCATGCCTAA+GGG - chr6.2:50525419-50525438 None:intergenic 45.0%
GTGCAGAAATCCTAGACTCT+TGG - chr6.2:50525816-50525835 None:intergenic 45.0%
GTTCCCTCATCACATCTGAA+TGG - chr6.2:50522682-50522701 None:intergenic 45.0%
TAGGCATGAACTACGAAGCA+CGG + chr6.2:50525420-50525439 MS.gene27127:intron 45.0%
TATGAAGCACGGACAATCCT+TGG - chr6.2:50525581-50525600 None:intergenic 45.0%
TCAAGAGCGAAGCAGATGAA+AGG + chr6.2:50523490-50523509 MS.gene27127:CDS 45.0%
TCTTCGCCGTGATCATGATA+CGG - chr6.2:50522917-50522936 None:intergenic 45.0%
TGAAGGCCAGAAAAAGGAGT+TGG + chr6.2:50523633-50523652 MS.gene27127:CDS 45.0%
TGCTTCGTAGTTCATGCCTA+AGG - chr6.2:50525420-50525439 None:intergenic 45.0%
! GCAAGTTGAAGGACGAGAAA+TGG + chr6.2:50523585-50523604 MS.gene27127:CDS 45.0%
! GGAGAATATCTTGGTGACAC+AGG - chr6.2:50522752-50522771 None:intergenic 45.0%
!! GATTAGAAGTGTTCCGGTGT+AGG - chr6.2:50525559-50525578 None:intergenic 45.0%
AAAATGGGAAGGCCGAGTGA+AGG + chr6.2:50523669-50523688 MS.gene27127:CDS 50.0%
ACACGACGCATTTCCTACAC+CGG + chr6.2:50525543-50525562 MS.gene27127:intron 50.0%
CCGAAGAAGCCTGAGTTAAC+AGG + chr6.2:50523937-50523956 MS.gene27127:CDS 50.0%
CGAAGGTCGAGTTAAGGAGA+TGG + chr6.2:50523717-50523736 MS.gene27127:CDS 50.0%
CTTCTTACACAGTGGAGTGC+CGG - chr6.2:50524710-50524729 None:intergenic 50.0%
GCAGCTTGAAGGCCAGAAAA+AGG + chr6.2:50523627-50523646 MS.gene27127:CDS 50.0%
GGAAGAGGGAAGTAGAAGAG+AGG + chr6.2:50523041-50523060 MS.gene27127:CDS 50.0%
GGCACTCCACTGTGTAAGAA+GGG + chr6.2:50524709-50524728 MS.gene27127:CDS 50.0%
GTTGAAGCTAGCGCATGATG+TGG + chr6.2:50524828-50524847 MS.gene27127:CDS 50.0%
TGAACTACGAAGCACGGACA+CGG + chr6.2:50525426-50525445 MS.gene27127:intron 50.0%
TGCTCAGCACAAGACAGCTA+TGG + chr6.2:50524975-50524994 MS.gene27127:CDS 50.0%
! ATGGAGCTGTTTGAGACCCT+GGG + chr6.2:50524994-50525013 MS.gene27127:CDS 50.0%
! GAGGGAACCTGTTTCTTGTG+AGG + chr6.2:50522694-50522713 MS.gene27127:CDS 50.0%
! TATGGAGCTGTTTGAGACCC+TGG + chr6.2:50524993-50525012 MS.gene27127:CDS 50.0%
! TCTAGGATTTCTGCACCGTG+TGG + chr6.2:50525820-50525839 MS.gene27127:intron 50.0%
! TTCTTACACAGTGGAGTGCC+GGG - chr6.2:50524709-50524728 None:intergenic 50.0%
ATCTGAGGATCTGCTTCGCG+AGG + chr6.2:50526661-50526680 MS.gene27127:CDS 55.0%
CGGCACTCCACTGTGTAAGA+AGG + chr6.2:50524708-50524727 MS.gene27127:CDS 55.0%
GAATCTGTGCAATGGACGGG+TGG + chr6.2:50523414-50523433 MS.gene27127:CDS 55.0%
GCTGCAGAGCCAAGTGATGA+AGG + chr6.2:50525845-50525864 MS.gene27127:intron 55.0%
GGTGGAGGAACTTGAGTCGA+AGG + chr6.2:50523432-50523451 MS.gene27127:CDS 55.0%
! TGTCAGTGTCGTGTCGGTGT+CGG + chr6.2:50525520-50525539 MS.gene27127:intron 55.0%
!! TCTTACACAGTGGAGTGCCG+GGG - chr6.2:50524708-50524727 None:intergenic 55.0%
GCACGGACACGGACACAACA+CGG + chr6.2:50525437-50525456 MS.gene27127:intron 60.0%
TCTGTGCAATGGACGGGTGG+AGG + chr6.2:50523417-50523436 MS.gene27127:CDS 60.0%
!! TTGGCTCTGCAGCTGCCACA+CGG - chr6.2:50525838-50525857 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 50522578 50526730 50522578 ID=MS.gene27127
chr6.2 mRNA 50522578 50526730 50522578 ID=MS.gene27127.t1;Parent=MS.gene27127
chr6.2 exon 50522578 50524009 50522578 ID=MS.gene27127.t1.exon1;Parent=MS.gene27127.t1
chr6.2 CDS 50522578 50524009 50522578 ID=cds.MS.gene27127.t1;Parent=MS.gene27127.t1
chr6.2 exon 50524539 50525036 50524539 ID=MS.gene27127.t1.exon2;Parent=MS.gene27127.t1
chr6.2 CDS 50524539 50525036 50524539 ID=cds.MS.gene27127.t1;Parent=MS.gene27127.t1
chr6.2 exon 50526312 50526484 50526312 ID=MS.gene27127.t1.exon3;Parent=MS.gene27127.t1
chr6.2 CDS 50526312 50526484 50526312 ID=cds.MS.gene27127.t1;Parent=MS.gene27127.t1
chr6.2 exon 50526590 50526730 50526590 ID=MS.gene27127.t1.exon4;Parent=MS.gene27127.t1
chr6.2 CDS 50526590 50526730 50526590 ID=cds.MS.gene27127.t1;Parent=MS.gene27127.t1
Gene Sequence

>MS.gene27127

ATGATGGATTTTGAGGCTTCTGATAAGCGAAACTTTTGTGTTGGTGATGATGATGGGAACTTAAATGCTAAAGGGCTCAATTCATGTGAGGAAAAAACATCCCATTCAGATGTGATGAGGGAACCTGTTTCTTGTGAGGACTTTGAATCTGAACAAGATGTTGATGATGTTCCTGTGTCACCAAGATATTCTCCGAGTTCAAGTTTGGGAATATGTAGTAGTAAACCTGATGTTTCTGTTAAGAAGAGGGATATTAGTAATACTACACTGCCAGTTAAGAGGTTGTTTGATAACAGCAATTCCTTGAACATTTCTGTTAAGAAACCAAAGATGTCACCGTATCATGATCACGGCGAAGACGAAGATAAAGACGAAGATGTTGATGATGAATCAGCTGATAAATCATTTTCCTTGCTGAAAAATGAAGTTGATTTGGTAGAAAAATTGTTTAAGAAATGCAAAAGGAAGAGGGAAGTAGAAGAGAGGAGATTACAGACCATAAAGAGAGATATTGAAGAATGTTGGAAAGAGCTTCGAAATAAGAAGCAGCAAGTTATTTGTGTTAGAAGAGTTAATGAAATTTACAACAAAATATTGGGAAAAGTTGAAAGCAAGGAAGAAGAACTCAAGGCTCTTACCCAAAAAGTTGCTGAATGTAATCTGGAACTTAAGTCCAAAGAGAAAGAGGTTGATGTAATGAAAATATTAATTAGCGGACAAGCGGAAATATTAGAGTCCGAAAGGAAGCAGTTACTAAAGGTAATATCAGTAATGCAGAATGATCGTGCTCAAATGAAGCGACTTGAAGGTCATATTAAGGAACTCGAGTCAAAAGAGAATCTGTGCAATGGACGGGTGGAGGAACTTGAGTCGAAGGAGAAGTACTTAGAAGGACAACTAAAGGCGTTAGAATCAAGAGCGAAGCAGATGAAAGGACATGTGAAACAGTTTAAGTCAATGAAGAGGGAACTTGAAAATCATATAAAGGAGGTTGAATCAAAAAATAAGCAAGTTGAAGGACGAGAAATGGAACTAAAGTCAAAAGAGATGCAGCTTGAAGGCCAGAAAAAGGAGTTGGAATTAAAAGAGGAAAAATGGGAAGGCCGAGTGAAGGAGCATGAATTGAAAGCAGAAGAACTCGAAGGTCGAGTTAAGGAGATGGAGTCAAAAAATAAGCATTTGGAAAGCCAAGTTGAGTATTTCAAATCAAACGATACACAATTTGAAGAACGGTGGAAAGAACTCGAGTCAAAAGAGAATCAATTCAAAGTAAAGGAGAAGGAGCTCAAGTTGAAAGAAGAGCAGATTGAAGTACAAGTCAAGGAGCTTGAGTCAAAGCTGAACAAATTTGGCGGACAACCGAAGAAGCCTGAGTTAACAGGGAAACACTATGAAGCATCAGAAAAACATATTGACAAGGAAAAAGAATCGGGTAAGTGTTGTCATTCATCTAGTTTATTGAAAAAAATTCATTTCAATTGCTTCTTTTAATGATGTTTATAATTCAATAGTAATATTTTATCATGTTAAAGTTGTATAGTTTTCAGCTCACCCTTGAACATTTTATGAATCTCTTAAATGCGAAAAACTCTTGCGTTTTTATCCATGGCTAAGGTTTAATTATAATATATGCTACTGTACTGCTAATGGTAGATTAGTATTTCAATGTAGTTTAAATTTTCCAAGTATATGCAAGTATGTGCAACTATTTTTAGTCTTATTTATGAAGTATGAATCAATCTGACACTATCTTCATTTATTTAGTTTTGGTGCGATATTGACATTGATTGTAACTATTAGTATAATTCTTTCCTATGTCAGCCATAAATTTCAATCTCAGAAAGTGTTTACATTCTTTCATAGTATACATTTTTTTCCGTTCCTATTGTTACCTTCATTAAACGATGCTTTTATCAATATGAGGGAGCTAAAATATCTTGCTCTGCTATCTAAATATGCAGTTGCATCTCACATGGACGATCAATTAAGCGATACCACTAGTAGAACAAGTTTGCAGTTGGACACAAGCGAGAAAACTGATGACGTTGAGTCACTTTGCAATGACATTTTTGTTTATCTGCAACAATCAGCAGATCCATCTAGACTTGTTTTGGAAATAATACTGAACCCCGGCACTCCACTGTGTAAGAAGGGAGAAAATGCCGTGATTATTGATGATAGCCACATCTATCTGTTAGAAGAACTGATGAGAATATCACCAACTATTAAACCTTGTGTACGAGAAAAAGCGTTGAAGCTAGCGCATGATGTGGAAGCTTACATGAGAGAGAATACTAAAAATTCTTCGGCTGTTCTTGGTTTTCTTCTGCTTCTGTCAATATATGGATTGCTTACTTCTTTTGATGAATGCGAAGTTTTGGAGCTTTTTGCATCTGTTGCTCAGCACAAGACAGCTATGGAGCTGTTTGAGACCCTGGGCTTTGCAAATAAAGTTTCTGGTATGTTAGTATAGAATGTTTTGGTCTGTGACTAGTATCCCTTCTTTTATCATTATGCTTTGGTATGTTACATCATATCATATGATTATGAAATGTGCAGAGATTATTAGCATTATCCCACTCTAAGATAGGGTGTCAATTTTTACTCATTTAATCATTTATGGTAGATGTGGGAATTTGTTATTGCAAATTCAATTTATATTGAAATGACAGAAAATGTAAATAATAAGATAATAGAAAACAAATCACTTGTTTTTCTTGACATGCCGGTAAAAAAGACTAACAACCAAGAGAATGACAGTTGGCATTTAAAATGTAAAACCACAGTAATTAGTTGGATACATTTTGGTCATAAATTTTTCTTATTTACATCAAAGTCCCCTTAGGCATGAACTACGAAGCACGGACACGGACACAACACGGACACTTACACGCCACACCACTAATTATTTGAGAAAACACATAATTGAGTGTAATTATATGTGTCAGTGTCGTGTCGGTGTCGGACACGACGCATTTCCTACACCGGAACACTTCTAATCCAAGGATTGTCCGTGCTTCATACAACATGAATGAGACACATGCTTAACAATCACATTCAACACAAGCCAGAGCATATCTGAATCACATTCCTAGCATGTTTCATTGAACTCGCTTTCACTAACCTGTTCTAGGTTCATTCAGATCACCAAATATAACCCAAAAAAAAATCTCTGAAATGAATGTAGTGATTGCTGAGCATTTGCAATGATTATTCAAATGTGAATTTAAATCTCCCAAGAGTCTAGGATTTCTGCACCGTGTGGCAGCTGCAGAGCCAAGTGATGAAGGCACAAAGAGCTTGAATATAAGACACATCTTTTCCTCTTTGCTACAATACTCACTTGCAGCTACTCGCTAGAGATGCACAGCAATACAACTCATAAAGATAGAATCAAGAAAAGACATGCTGAAGCAGTATAAAAAAAAGGAATCAGTTCAAGGATGAATCCTTTCAAGAAAATAGGACAACTCGTCTAAATTTGCCAAAGTCAATAATTTTAAATTATAAGTAAAATCTTTGCAGGATATATACACAGACACTAAGATTTAAGATTTAGCTGTTGGTACGAGATTGAACTGAAATAATGTAATTGACTTACTTTTTTCCATCCAACAGTTCTCACATTTGTTTTGAGAAAATTGACATCTTGGTATTAATGCTTGGAATATTCAGTCCAATCTGCTCAGTTTTTTGTTAATTTTTGATGAAGTGAAATTTCTTGTACCTTGCAGATTTTGTTAAATATATTATCAGGAGAAAGCAATTTGTTGAAGCTGTTAGATTCAGCTGTGCATATAACTTGGCTGACAAGAATCAATTAATTGATATGTTGCGAGAACACGTCCAGAATGCGAAACTGATTTGTACGAGCCGTTGTGAGAAAACTAACTCAATTGAAATCAAGGTTCTTATATTTTTATCATTTGAATTCTATTTTATGAAACATTCCATTTCAGACATATACCCCTTCATGATAGTCATAAATAAATTACTATGAACTTGAACTCAGGATAAGGCTAGAGATCAAGAAATCGCTAGTCTGGGAACTGTTCTACAATGCATATCAGACAACAGCCTAGAATCTGAGGATCTGCTTCGCGAGGAAATTCAATGCCGTATTCATGAGCTAAACGAACATAAAGGCAAATAG
Protein sequence

>MS.gene27127.t1

MMDFEASDKRNFCVGDDDGNLNAKGLNSCEEKTSHSDVMREPVSCEDFESEQDVDDVPVSPRYSPSSSLGICSSKPDVSVKKRDISNTTLPVKRLFDNSNSLNISVKKPKMSPYHDHGEDEDKDEDVDDESADKSFSLLKNEVDLVEKLFKKCKRKREVEERRLQTIKRDIEECWKELRNKKQQVICVRRVNEIYNKILGKVESKEEELKALTQKVAECNLELKSKEKEVDVMKILISGQAEILESERKQLLKVISVMQNDRAQMKRLEGHIKELESKENLCNGRVEELESKEKYLEGQLKALESRAKQMKGHVKQFKSMKRELENHIKEVESKNKQVEGREMELKSKEMQLEGQKKELELKEEKWEGRVKEHELKAEELEGRVKEMESKNKHLESQVEYFKSNDTQFEERWKELESKENQFKVKEKELKLKEEQIEVQVKELESKLNKFGGQPKKPELTGKHYEASEKHIDKEKESVASHMDDQLSDTTSRTSLQLDTSEKTDDVESLCNDIFVYLQQSADPSRLVLEIILNPGTPLCKKGENAVIIDDSHIYLLEELMRISPTIKPCVREKALKLAHDVEAYMRENTKNSSAVLGFLLLLSIYGLLTSFDECEVLELFASVAQHKTAMELFETLGFANKVSDFVKYIIRRKQFVEAVRFSCAYNLADKNQLIDMLREHVQNAKLICTSRCEKTNSIEIKDKARDQEIASLGTVLQCISDNSLESEDLLREEIQCRIHELNEHKGK