Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27150.t1 | XP_024636752.1 | 84.5 | 367 | 39 | 3 | 1 | 360 | 79 | 434 | 1.80E-162 | 582.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27150.t1 | G7JV31 | 67.8 | 444 | 124 | 7 | 1 | 433 | 79 | 514 | 1.5e-145 | 526.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050780 | MS.gene27150 | 0.810687 | 1.02E-50 | -1.69E-46 |
MS.gene051247 | MS.gene27150 | 0.825668 | 4.13E-54 | -1.69E-46 |
MS.gene051719 | MS.gene27150 | 0.807378 | 5.20E-50 | -1.69E-46 |
MS.gene051720 | MS.gene27150 | 0.801758 | 7.74E-49 | -1.69E-46 |
MS.gene051744 | MS.gene27150 | 0.81554 | 8.78E-52 | -1.69E-46 |
MS.gene053641 | MS.gene27150 | 0.803463 | 3.45E-49 | -1.69E-46 |
MS.gene05414 | MS.gene27150 | 0.808417 | 3.13E-50 | -1.69E-46 |
MS.gene05468 | MS.gene27150 | 0.806736 | 7.12E-50 | -1.69E-46 |
MS.gene054775 | MS.gene27150 | 0.812569 | 3.97E-51 | -1.69E-46 |
MS.gene057915 | MS.gene27150 | 0.808356 | 3.22E-50 | -1.69E-46 |
MS.gene058477 | MS.gene27150 | 0.811668 | 6.24E-51 | -1.69E-46 |
MS.gene060312 | MS.gene27150 | 0.80572 | 1.16E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27150.t1 | MTR_4g093510 | 64.835 | 455 | 119 | 8 | 1 | 433 | 79 | 514 | 0.0 | 538 |
MS.gene27150.t1 | MTR_4g093510 | 56.890 | 283 | 78 | 9 | 191 | 436 | 141 | 416 | 2.20e-75 | 249 |
MS.gene27150.t1 | MTR_4g093280 | 66.146 | 384 | 109 | 7 | 1 | 373 | 79 | 452 | 3.42e-161 | 469 |
MS.gene27150.t1 | MTR_4g093280 | 47.603 | 292 | 114 | 8 | 191 | 449 | 141 | 426 | 1.40e-56 | 198 |
MS.gene27150.t1 | MTR_4g093280 | 62.245 | 98 | 37 | 0 | 360 | 457 | 202 | 299 | 3.54e-28 | 118 |
MS.gene27150.t1 | MTR_4g093260 | 52.411 | 477 | 160 | 14 | 1 | 443 | 79 | 522 | 1.08e-127 | 390 |
MS.gene27150.t1 | MTR_4g093260 | 52.411 | 477 | 160 | 14 | 1 | 443 | 70 | 513 | 1.17e-127 | 390 |
MS.gene27150.t1 | MTR_4g093260 | 50.000 | 460 | 149 | 14 | 25 | 443 | 1 | 420 | 1.15e-112 | 348 |
MS.gene27150.t1 | MTR_4g093270 | 63.819 | 199 | 66 | 3 | 1 | 193 | 76 | 274 | 1.72e-78 | 251 |
MS.gene27150.t1 | MTR_4g093270 | 61.438 | 153 | 49 | 4 | 208 | 359 | 153 | 296 | 3.35e-47 | 169 |
MS.gene27150.t1 | MTR_4g093270 | 65.333 | 75 | 25 | 1 | 368 | 441 | 205 | 279 | 1.26e-19 | 90.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 159 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAGACTTTACATATTAATT+TGG | 0.211897 | 6.2:-51125537 | None:intergenic |
GACTTGATTTCCCACCTTAA+TGG | 0.221230 | 6.2:+51124713 | MS.gene27150:CDS |
CCCTGTGTTTCCTTCCATTA+AGG | 0.232179 | 6.2:-51124727 | None:intergenic |
ACCTTGAATTCCCATCTTAA+AGG | 0.243666 | 6.2:+51126270 | MS.gene27150:CDS |
AGAACCTTTCAGAACCCTTT+AGG | 0.269175 | 6.2:+51125504 | MS.gene27150:CDS |
TTCACTCTCTGCTGTTCCTT+TGG | 0.274660 | 6.2:-51124594 | None:intergenic |
ACCTTGAATTCCCACATTAA+TGG | 0.284729 | 6.2:+51125419 | MS.gene27150:CDS |
ATCCTTACTTGCTTGGTTGC+AGG | 0.292591 | 6.2:-51125064 | None:intergenic |
CGGTGCCCTTGTTCTCTGTT+TGG | 0.294742 | 6.2:-51125009 | None:intergenic |
GGCCTTACTTGCTTGGTTGC+AGG | 0.296529 | 6.2:-51124240 | None:intergenic |
GATTCCTTCGGTTTCTACTA+TGG | 0.299196 | 6.2:-51125282 | None:intergenic |
GGAACAGGGTGACGCGGTTT+GGG | 0.304692 | 6.2:+51137949 | MS.gene27150:CDS |
GATTGAGTGTTTGGAGGAAC+AGG | 0.319489 | 6.2:+51137934 | MS.gene27150:CDS |
CCTTGAATTCCCACATTAAT+GGG | 0.319670 | 6.2:+51125420 | MS.gene27150:CDS |
CGATGATAAAGAAATGTTAA+AGG | 0.331489 | 6.2:+51124015 | MS.gene27150:CDS |
TCTGACTATTTGCGGTTTCA+TGG | 0.331736 | 6.2:-51123667 | None:intergenic |
AAAATCTTCTAACGACCATT+TGG | 0.333249 | 6.2:-51138349 | None:intergenic |
TGTGGGAATTCAAGGTTATC+TGG | 0.341223 | 6.2:-51125412 | None:intergenic |
CTCCAAACACTCAATCTTGC+GGG | 0.346049 | 6.2:-51137927 | None:intergenic |
AACCCGCAAGATTGAGTGTT+TGG | 0.348397 | 6.2:+51137925 | MS.gene27150:CDS |
TCATTTGTCACTTCTGCATC+AGG | 0.350141 | 6.2:-51123980 | None:intergenic |
GCTAGCAATGAGTTTCTCTA+AGG | 0.350536 | 6.2:-51123784 | None:intergenic |
CCTCGGAGTTCTACACAAAA+TGG | 0.351208 | 6.2:+51124635 | MS.gene27150:CDS |
CTAAGCTAATGATCATCTTC+TGG | 0.358270 | 6.2:+51123589 | None:intergenic |
CCTTGAATTCCCATCTTAAA+GGG | 0.361822 | 6.2:+51126271 | MS.gene27150:CDS |
AGAGAGGATGATTAGTACTT+TGG | 0.361925 | 6.2:+51138093 | MS.gene27150:CDS |
CCCATTAATGTGGGAATTCA+AGG | 0.362628 | 6.2:-51125420 | None:intergenic |
CCCTTTAAGATGGGAATTCA+AGG | 0.364865 | 6.2:-51126271 | None:intergenic |
GAGAGGATGATTAGTACTTT+GGG | 0.366154 | 6.2:+51138094 | MS.gene27150:CDS |
AGGAACAGGGTGACGCGGTT+TGG | 0.371652 | 6.2:+51137948 | MS.gene27150:CDS |
GCCCTGTGAAAGTCAGTGTT+TGG | 0.371907 | 6.2:-51137988 | None:intergenic |
TTGGAATTAATCATCCTAAA+GGG | 0.375665 | 6.2:-51125518 | None:intergenic |
ACGCGGTTTGGGAGTTAGAT+AGG | 0.376752 | 6.2:+51137960 | MS.gene27150:CDS |
TGACTTTCACAGGGCTGGTT+AGG | 0.388067 | 6.2:+51137996 | MS.gene27150:CDS |
CCTTTGGTTTCCACTGTGAC+AGG | 0.391417 | 6.2:-51124578 | None:intergenic |
CTTGGTGTTGGTGGTGCTAA+TGG | 0.392135 | 6.2:+51138319 | MS.gene27150:CDS |
TCCTCAAAATGATAAACAAC+CGG | 0.401962 | 6.2:-51138208 | None:intergenic |
GTACTAATCATCCTCTCTAA+TGG | 0.402556 | 6.2:-51138088 | None:intergenic |
TGAAAGAATCCTTACTTGCT+TGG | 0.409634 | 6.2:-51125071 | None:intergenic |
TGTGTTTCCTCCCTTTAAGA+TGG | 0.421058 | 6.2:-51126281 | None:intergenic |
GAAAGGTTCTTCTGCGGAGC+AGG | 0.422036 | 6.2:-51125491 | None:intergenic |
AAATCTTCTAACGACCATTT+GGG | 0.423351 | 6.2:-51138348 | None:intergenic |
TACAATTTGCAGATGATGCC+GGG | 0.427477 | 6.2:+51137881 | MS.gene27150:intron |
TTTGGAATTAATCATCCTAA+AGG | 0.440188 | 6.2:-51125519 | None:intergenic |
TGAATGAGGCCTTACTTGCT+TGG | 0.443918 | 6.2:-51124247 | None:intergenic |
ATTCGACCTCTGAGAGGGCT+AGG | 0.446704 | 6.2:+51138137 | MS.gene27150:CDS |
TGGCTCATCATACCGGACTT+TGG | 0.448937 | 6.2:+51123609 | MS.gene27150:CDS |
GTCATTGCCATCGATTCCTT+CGG | 0.451104 | 6.2:-51125294 | None:intergenic |
TCCCAAACACTGACTTTCAC+AGG | 0.451720 | 6.2:+51137986 | MS.gene27150:CDS |
GTGTTTCCTCCCTTTAAGAT+GGG | 0.453147 | 6.2:-51126280 | None:intergenic |
ATCTTAAAGGGAGGAAACAC+AGG | 0.454301 | 6.2:+51126283 | MS.gene27150:CDS |
GTTAGGACAACCGAAGGAAT+AGG | 0.454454 | 6.2:+51138013 | MS.gene27150:CDS |
ATGTTCACCTTCTGCGAAGC+AGG | 0.458818 | 6.2:-51126342 | None:intergenic |
AACACTGACTTTCACAGGGC+TGG | 0.459255 | 6.2:+51137991 | MS.gene27150:CDS |
GTGGACTTGTGCTTTATGTT+TGG | 0.459600 | 6.2:+51125376 | MS.gene27150:CDS |
TAATAAACCTCCTATTCCTT+CGG | 0.464684 | 6.2:-51138023 | None:intergenic |
AGGGTCTTTGTGCAGACAAA+TGG | 0.469962 | 6.2:+51124153 | MS.gene27150:intron |
GAGAGATATATGAAAGAGAA+TGG | 0.473137 | 6.2:+51123753 | MS.gene27150:CDS |
ATGTCTGCTCCATCCTCCTC+AGG | 0.474703 | 6.2:-51138235 | None:intergenic |
CTTTGGGTCTTGATAGAGCT+AGG | 0.475378 | 6.2:+51138110 | MS.gene27150:CDS |
GTGGACTTGTGCTATATGTT+TGG | 0.475777 | 6.2:+51124670 | MS.gene27150:CDS |
GTATGGCGAAAACGAGGCCT+TGG | 0.476262 | 6.2:-51138163 | None:intergenic |
ACCACCAACACCAAGGTCTT+CGG | 0.481758 | 6.2:-51138311 | None:intergenic |
ACAGCAAAGAGTGACAAATC+TGG | 0.484031 | 6.2:+51126159 | MS.gene27150:CDS |
CCCTGTGAAAGTCAGTGTTT+GGG | 0.486188 | 6.2:-51137987 | None:intergenic |
TCCGAAGACCTTGGTGTTGG+TGG | 0.490374 | 6.2:+51138310 | MS.gene27150:CDS |
TGTGTTTCCTCCCATTAATG+TGG | 0.493651 | 6.2:-51125430 | None:intergenic |
TCGCATTAGTGTGCGTCCCC+CGG | 0.496159 | 6.2:+51138189 | MS.gene27150:CDS |
TCTTAAGAGTTCTGCACAGA+AGG | 0.497488 | 6.2:+51126191 | MS.gene27150:CDS |
TTACAATTTGCAGATGATGC+CGG | 0.498536 | 6.2:+51137880 | MS.gene27150:intron |
TAAGAAGCTCGTCCAAAGTC+CGG | 0.504580 | 6.2:-51123621 | None:intergenic |
TTCGACCTCTGAGAGGGCTA+GGG | 0.508706 | 6.2:+51138138 | MS.gene27150:CDS |
CATCTTCTGGCTCATCATAC+CGG | 0.514317 | 6.2:+51123602 | MS.gene27150:CDS |
GAACAAGGGCACCGAGTATG+TGG | 0.516613 | 6.2:+51125018 | MS.gene27150:CDS |
CTTTAACATTTCTTTATCAT+CGG | 0.517051 | 6.2:-51124014 | None:intergenic |
GAGGATGATCCTGAGGAGGA+TGG | 0.520293 | 6.2:+51138226 | MS.gene27150:CDS |
CCTCAAAATGATAAACAACC+GGG | 0.525404 | 6.2:-51138207 | None:intergenic |
ATCGATGGCAATGACGCAGC+TGG | 0.526770 | 6.2:+51125302 | MS.gene27150:CDS |
GAAACCGCAAATAGTCAGAT+GGG | 0.530505 | 6.2:+51123671 | MS.gene27150:CDS |
TGTGTTTCCTTCCATTAAGG+TGG | 0.531895 | 6.2:-51124724 | None:intergenic |
AGAAGGAAGTGCAGAAAGAG+TGG | 0.533380 | 6.2:+51126208 | MS.gene27150:CDS |
TAAATAGCTTCTGGAAGAAG+TGG | 0.534630 | 6.2:+51123697 | MS.gene27150:CDS |
ATCAATAGCCTCCACATACT+CGG | 0.534744 | 6.2:-51125029 | None:intergenic |
ACCTACCCAGCAGAAGCAAA+AGG | 0.535322 | 6.2:+51124781 | MS.gene27150:CDS |
ACAGCAGAGAGTGAAAGAGC+TGG | 0.536962 | 6.2:+51124602 | MS.gene27150:CDS |
TGTCATTCATCATATTACCT+TGG | 0.537522 | 6.2:+51138054 | MS.gene27150:CDS |
GTGTTTCCTCCCATTAATGT+GGG | 0.538572 | 6.2:-51125429 | None:intergenic |
CCGCAAGATTGAGTGTTTGG+AGG | 0.542127 | 6.2:+51137928 | MS.gene27150:CDS |
AGAAGGAAGTGCAGAAAGAG+TGG | 0.545798 | 6.2:+51125357 | MS.gene27150:CDS |
CCCTCCGAAGACCTTGGTGT+TGG | 0.551178 | 6.2:+51138307 | MS.gene27150:CDS |
GATGTGGGTGTGAGTGGACG+TGG | 0.551294 | 6.2:+51138268 | MS.gene27150:CDS |
GAGCTGGAGGAGAAGTTCCT+CGG | 0.551776 | 6.2:+51124618 | MS.gene27150:CDS |
GTGTTTCCTTCCATTAAGGT+GGG | 0.556051 | 6.2:-51124723 | None:intergenic |
CCTCCAAACACTCAATCTTG+CGG | 0.561594 | 6.2:-51137928 | None:intergenic |
TGAAACCGCAAATAGTCAGA+TGG | 0.561609 | 6.2:+51123670 | MS.gene27150:CDS |
GCTAATGGAGATCTCCCAAA+TGG | 0.563217 | 6.2:+51138334 | MS.gene27150:CDS |
AAGACTCCAAACAGAGAACA+AGG | 0.564033 | 6.2:+51125003 | MS.gene27150:CDS |
GTGGACTTGTGCTTTGTGCT+CGG | 0.565292 | 6.2:+51126227 | MS.gene27150:CDS |
TGATTTCCCACCTTAATGGA+AGG | 0.565801 | 6.2:+51124717 | MS.gene27150:CDS |
ACCTTAATGGAAGGAAACAC+AGG | 0.566703 | 6.2:+51124726 | MS.gene27150:CDS |
TTGTGCAGACAAATGGAGAA+AGG | 0.568069 | 6.2:+51124160 | MS.gene27150:intron |
GAGTGATTCAGTGACTCTCC+CGG | 0.568603 | 6.2:-51137899 | None:intergenic |
AGAGAAACTCATTGCTAGCA+AGG | 0.570547 | 6.2:+51123788 | MS.gene27150:CDS |
GAAGCAACCTGCTTCGCAGA+AGG | 0.574291 | 6.2:+51126335 | MS.gene27150:CDS |
ACGGATCCCTCCGAAGACCT+TGG | 0.574546 | 6.2:+51138301 | MS.gene27150:CDS |
CTGAGAGGGCTAGGGGACCA+AGG | 0.575845 | 6.2:+51138146 | MS.gene27150:CDS |
GGGTCTTGATAGAGCTAGGG+AGG | 0.580621 | 6.2:+51138114 | MS.gene27150:CDS |
GCACACTAATGCGAGCGGTA+TGG | 0.581530 | 6.2:-51138180 | None:intergenic |
GATGGCAATGACGCAGCTGG+TGG | 0.582251 | 6.2:+51125305 | MS.gene27150:CDS |
AAAATGGAGTGCAGAGAGAG+TGG | 0.584012 | 6.2:+51124651 | MS.gene27150:CDS |
GAGTTCTACCGCTACACAGA+AGG | 0.584990 | 6.2:+51125340 | MS.gene27150:CDS |
CTGCACTTCCTTCTGTGTAG+CGG | 0.588324 | 6.2:-51125348 | None:intergenic |
GTGACTGATGTGGGTGTGAG+TGG | 0.589058 | 6.2:+51138262 | MS.gene27150:CDS |
GAAACACAGAGCTGCTTGTG+AGG | 0.591208 | 6.2:+51125445 | MS.gene27150:CDS |
TCGACCTCTGAGAGGGCTAG+GGG | 0.595273 | 6.2:+51138139 | MS.gene27150:CDS |
ACCAACACCAAGGTCTTCGG+AGG | 0.596816 | 6.2:-51138308 | None:intergenic |
GGGAGAGTCACTGAATCACT+CGG | 0.598895 | 6.2:+51137901 | MS.gene27150:CDS |
TGGACGTGGTGAAGATGAAA+CGG | 0.601473 | 6.2:+51138282 | MS.gene27150:CDS |
TTTGGGTCTTGATAGAGCTA+GGG | 0.603912 | 6.2:+51138111 | MS.gene27150:CDS |
TAATGGCAATACTATCTCCA+AGG | 0.606348 | 6.2:-51138071 | None:intergenic |
TCATCCTAAAGGGTTCTGAA+AGG | 0.610088 | 6.2:-51125508 | None:intergenic |
CCCAAACACTGACTTTCACA+GGG | 0.610738 | 6.2:+51137987 | MS.gene27150:CDS |
AGGACAACCGAAGGAATAGG+AGG | 0.611443 | 6.2:+51138016 | MS.gene27150:CDS |
GTAGAAACCGAAGGAATCGA+TGG | 0.618558 | 6.2:+51125287 | MS.gene27150:CDS |
GCAGAGAGTGAAAGAGCTGG+AGG | 0.620089 | 6.2:+51124605 | MS.gene27150:CDS |
AGATAGTATTGCCATTAGAG+AGG | 0.625900 | 6.2:+51138077 | MS.gene27150:CDS |
TGGGTTGATTCCTGTCACAG+TGG | 0.628225 | 6.2:+51124568 | MS.gene27150:CDS |
TGAATTCCCATCTTAAAGGG+AGG | 0.628329 | 6.2:+51126274 | MS.gene27150:CDS |
CAATGACGCAGCTGGTGGAG+AGG | 0.633183 | 6.2:+51125310 | MS.gene27150:CDS |
GGAGGATTCGACCTCTGAGA+GGG | 0.634282 | 6.2:+51138132 | MS.gene27150:CDS |
ACTCACACCCACATCAGTCA+CGG | 0.637308 | 6.2:-51138260 | None:intergenic |
TGAATTCCCACATTAATGGG+AGG | 0.637945 | 6.2:+51125423 | MS.gene27150:CDS |
TTTGGAGGAACAGGGTGACG+CGG | 0.639144 | 6.2:+51137943 | MS.gene27150:CDS |
TATTGTAGAACACAATGTGT+AGG | 0.642645 | 6.2:+51123957 | MS.gene27150:intron |
AAACCGCAAATAGTCAGATG+GGG | 0.645741 | 6.2:+51123672 | MS.gene27150:CDS |
ATTGAGTGTTTGGAGGAACA+GGG | 0.648984 | 6.2:+51137935 | MS.gene27150:CDS |
TCAGTCACAGTGGAAACGAA+AGG | 0.653344 | 6.2:+51126135 | MS.gene27150:CDS |
GGTTCTGAAAGGTTCTTCTG+CGG | 0.657548 | 6.2:-51125497 | None:intergenic |
CTCAAAATGATAAACAACCG+GGG | 0.667431 | 6.2:-51138206 | None:intergenic |
CCTGTCACAGTGGAAACCAA+AGG | 0.667906 | 6.2:+51124578 | MS.gene27150:CDS |
GGGAGGATTCGACCTCTGAG+AGG | 0.668031 | 6.2:+51138131 | MS.gene27150:CDS |
CGAGCGGTATGGCGAAAACG+AGG | 0.668661 | 6.2:-51138169 | None:intergenic |
GGAGAGTCACTGAATCACTC+GGG | 0.672005 | 6.2:+51137902 | MS.gene27150:CDS |
AGACATGACCGTGACTGATG+TGG | 0.673300 | 6.2:+51138252 | MS.gene27150:CDS |
CAAGGGCACCGAGTATGTGG+AGG | 0.677714 | 6.2:+51125021 | MS.gene27150:CDS |
GACATGACCGTGACTGATGT+GGG | 0.678835 | 6.2:+51138253 | MS.gene27150:CDS |
TCAACCATAGTAGAAACCGA+AGG | 0.682906 | 6.2:+51125278 | MS.gene27150:CDS |
CCTTAATGGAAGGAAACACA+GGG | 0.683958 | 6.2:+51124727 | MS.gene27150:CDS |
GGGCTGGTTAGGACAACCGA+AGG | 0.685562 | 6.2:+51138007 | MS.gene27150:CDS |
CCAACACCAAGGTCTTCGGA+GGG | 0.690233 | 6.2:-51138307 | None:intergenic |
TGTGTAGCGGTAGAACTCTG+AGG | 0.690266 | 6.2:-51125335 | None:intergenic |
AAATGCATCATCAGTCACAG+TGG | 0.696059 | 6.2:+51126125 | MS.gene27150:CDS |
TGGTCCCCTAGCCCTCTCAG+AGG | 0.696818 | 6.2:-51138143 | None:intergenic |
TCTTAAAGGGAGGAAACACA+GGG | 0.699052 | 6.2:+51126284 | MS.gene27150:CDS |
AGACTCCAAACAGAGAACAA+GGG | 0.699952 | 6.2:+51125004 | MS.gene27150:CDS |
AACCGCAAATAGTCAGATGG+GGG | 0.700336 | 6.2:+51123673 | MS.gene27150:CDS |
CATTAGCACCACCAACACCA+AGG | 0.704164 | 6.2:-51138318 | None:intergenic |
TCAAAATGATAAACAACCGG+GGG | 0.716672 | 6.2:-51138205 | None:intergenic |
GGGACGCACACTAATGCGAG+CGG | 0.718807 | 6.2:-51138185 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 51123597 | 51138363 | 51123597 | ID=MS.gene27150 |
chr6.2 | mRNA | 51123597 | 51138363 | 51123597 | ID=MS.gene27150.t1;Parent=MS.gene27150 |
chr6.2 | exon | 51123597 | 51123809 | 51123597 | ID=MS.gene27150.t1.exon1;Parent=MS.gene27150.t1 |
chr6.2 | CDS | 51123597 | 51123809 | 51123597 | ID=cds.MS.gene27150.t1;Parent=MS.gene27150.t1 |
chr6.2 | exon | 51123965 | 51124036 | 51123965 | ID=MS.gene27150.t1.exon2;Parent=MS.gene27150.t1 |
chr6.2 | CDS | 51123965 | 51124036 | 51123965 | ID=cds.MS.gene27150.t1;Parent=MS.gene27150.t1 |
chr6.2 | exon | 51124168 | 51124254 | 51124168 | ID=MS.gene27150.t1.exon3;Parent=MS.gene27150.t1 |
chr6.2 | CDS | 51124168 | 51124254 | 51124168 | ID=cds.MS.gene27150.t1;Parent=MS.gene27150.t1 |
chr6.2 | exon | 51124554 | 51124859 | 51124554 | ID=MS.gene27150.t1.exon4;Parent=MS.gene27150.t1 |
chr6.2 | CDS | 51124554 | 51124859 | 51124554 | ID=cds.MS.gene27150.t1;Parent=MS.gene27150.t1 |
chr6.2 | exon | 51124992 | 51125078 | 51124992 | ID=MS.gene27150.t1.exon5;Parent=MS.gene27150.t1 |
chr6.2 | CDS | 51124992 | 51125078 | 51124992 | ID=cds.MS.gene27150.t1;Parent=MS.gene27150.t1 |
chr6.2 | exon | 51125239 | 51125553 | 51125239 | ID=MS.gene27150.t1.exon6;Parent=MS.gene27150.t1 |
chr6.2 | CDS | 51125239 | 51125553 | 51125239 | ID=cds.MS.gene27150.t1;Parent=MS.gene27150.t1 |
chr6.2 | exon | 51126090 | 51126356 | 51126090 | ID=MS.gene27150.t1.exon7;Parent=MS.gene27150.t1 |
chr6.2 | CDS | 51126090 | 51126356 | 51126090 | ID=cds.MS.gene27150.t1;Parent=MS.gene27150.t1 |
chr6.2 | exon | 51137893 | 51138363 | 51137893 | ID=MS.gene27150.t1.exon8;Parent=MS.gene27150.t1 |
chr6.2 | CDS | 51137893 | 51138363 | 51137893 | ID=cds.MS.gene27150.t1;Parent=MS.gene27150.t1 |
Gene Sequence |
Protein sequence |