Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27239.t1 | XP_003629155.1 | 94.8 | 539 | 27 | 1 | 1 | 538 | 1 | 539 | 4.60E-189 | 671 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27239.t1 | Q9SII8 | 50.4 | 569 | 233 | 10 | 1 | 538 | 1 | 551 | 3.8e-83 | 310.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27239.t1 | G7L9G3 | 94.8 | 539 | 27 | 1 | 1 | 538 | 1 | 539 | 3.3e-189 | 671.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050787 | MS.gene27239 | -0.819529 | 1.11E-52 | -1.69E-46 |
| MS.gene051468 | MS.gene27239 | 0.805041 | 1.62E-49 | -1.69E-46 |
| MS.gene052361 | MS.gene27239 | 0.850208 | 1.97E-60 | -1.69E-46 |
| MS.gene053054 | MS.gene27239 | 0.814835 | 1.26E-51 | -1.69E-46 |
| MS.gene059896 | MS.gene27239 | 0.816049 | 6.76E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene27239 | 0.803574 | 3.27E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene27239 | 0.809677 | 1.68E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27239.t1 | MTR_8g073920 | 98.330 | 539 | 8 | 1 | 1 | 538 | 1 | 539 | 0.0 | 1056 |
| MS.gene27239.t1 | MTR_5g023830 | 75.000 | 552 | 112 | 12 | 1 | 538 | 1 | 540 | 0.0 | 726 |
| MS.gene27239.t1 | MTR_5g023830 | 75.000 | 552 | 114 | 12 | 1 | 538 | 1 | 542 | 0.0 | 717 |
| MS.gene27239.t1 | MTR_8g073910 | 41.165 | 532 | 203 | 16 | 18 | 538 | 53 | 485 | 2.92e-106 | 327 |
| MS.gene27239.t1 | MTR_8g072040 | 51.613 | 62 | 26 | 1 | 18 | 79 | 46 | 103 | 2.08e-13 | 67.4 |
| MS.gene27239.t1 | MTR_1g026290 | 35.052 | 97 | 62 | 1 | 11 | 107 | 20 | 115 | 1.29e-12 | 71.2 |
| MS.gene27239.t1 | MTR_1g026290 | 35.052 | 97 | 62 | 1 | 11 | 107 | 20 | 115 | 1.29e-12 | 71.2 |
| MS.gene27239.t1 | MTR_1g026290 | 35.052 | 97 | 62 | 1 | 11 | 107 | 20 | 115 | 1.61e-12 | 70.9 |
| MS.gene27239.t1 | MTR_1g026290 | 35.052 | 97 | 62 | 1 | 11 | 107 | 20 | 115 | 1.66e-12 | 70.9 |
| MS.gene27239.t1 | MTR_7g451280 | 35.938 | 128 | 74 | 5 | 306 | 429 | 12 | 135 | 5.94e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27239.t1 | AT2G17200 | 57.774 | 566 | 196 | 13 | 1 | 538 | 1 | 551 | 3.25e-180 | 518 |
| MS.gene27239.t1 | AT2G17190 | 59.099 | 555 | 193 | 13 | 1 | 538 | 1 | 538 | 4.58e-178 | 513 |
| MS.gene27239.t1 | AT5G42220 | 36.806 | 144 | 80 | 5 | 15 | 156 | 21 | 155 | 2.60e-13 | 73.6 |
| MS.gene27239.t1 | AT5G42220 | 36.806 | 144 | 80 | 5 | 15 | 156 | 21 | 155 | 2.60e-13 | 73.6 |
Find 186 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTAACCATTTGATCTATT+TGG | 0.095163 | 8.3:+29213888 | None:intergenic |
| CATCATTTCTCTCATTAAAT+TGG | 0.113663 | 8.3:+29216914 | None:intergenic |
| TTGATCTCCTGGTGTTATTT+TGG | 0.155737 | 8.3:+29216318 | None:intergenic |
| TGCAGCCGTTGAACGTCTTT+TGG | 0.207783 | 8.3:-29213037 | MS.gene27239:CDS |
| CTTATTTGGCGAGGGATTTC+CGG | 0.227137 | 8.3:-29216973 | MS.gene27239:CDS |
| GCCGGTAATACAGCACTTTC+AGG | 0.241961 | 8.3:-29216594 | MS.gene27239:CDS |
| GGTTTAGGAGGGCTCGGTTT+TGG | 0.248427 | 8.3:-29217044 | MS.gene27239:CDS |
| GGCGCTGGAGCTAATGCTGC+TGG | 0.256693 | 8.3:-29217068 | MS.gene27239:CDS |
| TCCAGCATGTTTGGTGGCCT+TGG | 0.260519 | 8.3:-29213933 | MS.gene27239:CDS |
| GGACTAGGTGCCAATGGCAC+TGG | 0.260883 | 8.3:-29217005 | MS.gene27239:CDS |
| CTTGGTTTGCCTGGCCTTGA+AGG | 0.267418 | 8.3:-29216248 | MS.gene27239:CDS |
| GCCTGGCCTTGAAGGCATGC+TGG | 0.268650 | 8.3:-29216240 | MS.gene27239:CDS |
| AAATTGGGATTTGAAATAAA+TGG | 0.271386 | 8.3:+29216930 | None:intergenic |
| GGCCTTGGAGCTGGTGGCCT+TGG | 0.281154 | 8.3:-29213918 | MS.gene27239:CDS |
| AGGGCTCTTATTGCCACTTC+GGG | 0.284847 | 8.3:-29213069 | MS.gene27239:CDS |
| CCCTGAAAGTGCTGTATTAC+CGG | 0.314430 | 8.3:+29216593 | None:intergenic |
| TTTGGAGCTTCATTGTTTCC+TGG | 0.314820 | 8.3:-29217026 | MS.gene27239:CDS |
| TTAGGAGGGCTTGGTTTGCC+TGG | 0.316520 | 8.3:-29216257 | MS.gene27239:CDS |
| GGACTCAGGGTGGCCTAGCC+AGG | 0.319120 | 8.3:-29216572 | MS.gene27239:CDS |
| GGCATCTTGTTGCAGGGAAT+CGG | 0.321826 | 8.3:-29214613 | MS.gene27239:intron |
| CAGGGTTCCTTGTAGCTTCA+AGG | 0.334942 | 8.3:+29216748 | None:intergenic |
| TCCAACCCCATGTTGTTAAA+TGG | 0.337199 | 8.3:+29213963 | None:intergenic |
| AAGGGTCTGGCGGAGAGTAC+TGG | 0.348994 | 8.3:+29216767 | None:intergenic |
| ATCATTTCACGCATGATCTC+AGG | 0.358686 | 8.3:+29216729 | None:intergenic |
| GGCATCATTTGTTGTGGTAT+TGG | 0.361362 | 8.3:+29217094 | None:intergenic |
| ATCATTTCTCTCATTAAATT+GGG | 0.367089 | 8.3:+29216915 | None:intergenic |
| AGCAGTTGTTTCAGAATTAG+TGG | 0.368320 | 8.3:+29216527 | None:intergenic |
| CCTACTGGCTTAGGAGGGCT+TGG | 0.368516 | 8.3:-29216266 | MS.gene27239:CDS |
| CCTGGCCTTGAAGGCATGCT+GGG | 0.369591 | 8.3:-29216239 | MS.gene27239:CDS |
| TACCACCCAGCATGCCTTCA+AGG | 0.370796 | 8.3:+29216234 | None:intergenic |
| GGCAGATCATGCTGTGCATT+TGG | 0.371321 | 8.3:-29217168 | MS.gene27239:CDS |
| TCCTTGTAGCTTCAAGGGTC+TGG | 0.373739 | 8.3:+29216754 | None:intergenic |
| CGGTACAAAGTATTCCGTTC+AGG | 0.373894 | 8.3:-29218592 | MS.gene27239:CDS |
| GCGCTGGAGCTAATGCTGCT+GGG | 0.376682 | 8.3:-29217067 | MS.gene27239:CDS |
| TCTCTTGAAGCTGTGTAAGC+TGG | 0.382513 | 8.3:+29213121 | None:intergenic |
| TGCTGCATTTGTTCAAGATC+CGG | 0.401443 | 8.3:+29216954 | None:intergenic |
| GACTAGGTGCCAATGGCACT+GGG | 0.403673 | 8.3:-29217004 | MS.gene27239:CDS |
| ATGAGATTCCGCACTATCTC+GGG | 0.404359 | 8.3:+29216858 | None:intergenic |
| CCCACCAGTGGTTGATCTCC+TGG | 0.405497 | 8.3:+29216307 | None:intergenic |
| TTGACACACAAGAGAACATA+AGG | 0.405989 | 8.3:-29213089 | MS.gene27239:CDS |
| ACAAATGATGCCGCAGGCGC+TGG | 0.407506 | 8.3:-29217083 | MS.gene27239:CDS |
| GCTTCATTGTTTCCTGGACT+AGG | 0.416547 | 8.3:-29217020 | MS.gene27239:CDS |
| TGGTTGAGGGATTAGTTGAT+TGG | 0.416871 | 8.3:+29216547 | None:intergenic |
| CCTGTAGAGGACCAAGGATT+AGG | 0.420164 | 8.3:+29216474 | None:intergenic |
| GAGATGTTATCCAGCATGTT+TGG | 0.421661 | 8.3:-29213942 | MS.gene27239:CDS |
| CCCAGCATGCCTTCAAGGCC+AGG | 0.423484 | 8.3:+29216239 | None:intergenic |
| ATGTTTGGTGGCCTTGGAGC+TGG | 0.423707 | 8.3:-29213927 | MS.gene27239:CDS |
| GCTGAGACAGAAGTGCTTGC+TGG | 0.432802 | 8.3:+29215488 | None:intergenic |
| CAACCCACAAACTTTGAGTC+AGG | 0.433513 | 8.3:-29216132 | MS.gene27239:intron |
| TTAAGTACGTGTGCTAGCTC+AGG | 0.440549 | 8.3:+29216795 | None:intergenic |
| AAATGATGAGAAATACAGAT+AGG | 0.441026 | 8.3:-29216713 | MS.gene27239:CDS |
| TCTCTAAGAGAATTTAAATC+AGG | 0.446313 | 8.3:+29215985 | None:intergenic |
| CAACCACTGGTGGGGATGCT+AGG | 0.446872 | 8.3:-29216298 | MS.gene27239:CDS |
| GTTTCTCTCGATTCCACCGT+TGG | 0.448102 | 8.3:-29218570 | MS.gene27239:CDS |
| CGCTGGAGCTAATGCTGCTG+GGG | 0.451509 | 8.3:-29217066 | MS.gene27239:CDS |
| CTCTTGAAGCTGTGTAAGCT+GGG | 0.451569 | 8.3:+29213122 | None:intergenic |
| CTGTCTACCTGCATTGTCTC+AGG | 0.452131 | 8.3:+29215922 | None:intergenic |
| TCGGGTCAAACCGGTCAAAC+TGG | 0.454383 | 8.3:-29214594 | MS.gene27239:CDS |
| TTCCACCGTTGGATCGTTCA+AGG | 0.458297 | 8.3:-29218559 | MS.gene27239:CDS |
| CTTACTAGATTCTGCATAGC+AGG | 0.460235 | 8.3:+29216885 | None:intergenic |
| TGCATCATTTGTGAGATAGC+TGG | 0.460997 | 8.3:+29216167 | None:intergenic |
| GCTGCTCCAAATAGATCAAA+TGG | 0.463157 | 8.3:-29213894 | MS.gene27239:intron |
| GATACCTGACTCAAAGTTTG+TGG | 0.465492 | 8.3:+29216128 | None:intergenic |
| GCATCTTGTTGCAGGGAATC+GGG | 0.466113 | 8.3:-29214612 | MS.gene27239:intron |
| CCTAATCCTTGGTCCTCTAC+AGG | 0.466381 | 8.3:-29216474 | MS.gene27239:intron |
| GTTTCAGAATTAGTGGTTGA+GGG | 0.468060 | 8.3:+29216534 | None:intergenic |
| AAGGGCTCTTATTGCCACTT+CGG | 0.468533 | 8.3:-29213070 | MS.gene27239:CDS |
| TGTTTCAGAATTAGTGGTTG+AGG | 0.479560 | 8.3:+29216533 | None:intergenic |
| TGCAGGGAATCGGGTCAAAC+CGG | 0.483495 | 8.3:-29214603 | MS.gene27239:intron |
| TTAGGAAGTGGGTTAGCATT+GGG | 0.483668 | 8.3:+29216492 | None:intergenic |
| CTAACCCACTTCCTAATCCT+TGG | 0.484134 | 8.3:-29216485 | MS.gene27239:CDS |
| TAGTTGATTGGTCCCTGGCT+AGG | 0.484407 | 8.3:+29216559 | None:intergenic |
| CAGCAAGCACCTACTGGCTT+AGG | 0.485272 | 8.3:-29216275 | MS.gene27239:CDS |
| GCTAGGCAGCAAGCACCTAC+TGG | 0.485833 | 8.3:-29216281 | MS.gene27239:CDS |
| ATTAGGAAGTGGGTTAGCAT+TGG | 0.485988 | 8.3:+29216491 | None:intergenic |
| TGAAACAATCGTAGGAACTC+TGG | 0.486341 | 8.3:+29215949 | None:intergenic |
| TCCATGAGCTCTTGCATCTG+TGG | 0.486598 | 8.3:+29216825 | None:intergenic |
| GAAGGCATGCTGGGTGGTAG+TGG | 0.487263 | 8.3:-29216230 | MS.gene27239:CDS |
| AGGGTTCCTTGTAGCTTCAA+GGG | 0.487986 | 8.3:+29216749 | None:intergenic |
| ATGAGACGTTGTTGTTGCGC+GGG | 0.488217 | 8.3:+29218510 | None:intergenic |
| AGCATTAGCTCCAGCGCCTG+CGG | 0.488420 | 8.3:+29217073 | None:intergenic |
| GTAATTTATTATAGGTTTGG+AGG | 0.493413 | 8.3:-29217189 | MS.gene27239:intron |
| CCCACAGATGCAAGAGCTCA+TGG | 0.494458 | 8.3:-29216826 | MS.gene27239:CDS |
| TATGAGATTCCGCACTATCT+CGG | 0.496987 | 8.3:+29216857 | None:intergenic |
| CAAGCACCTACTGGCTTAGG+AGG | 0.499973 | 8.3:-29216272 | MS.gene27239:CDS |
| AACGGAATACTTTGTACCGT+TGG | 0.500258 | 8.3:+29218596 | None:intergenic |
| AGTGGGTTAGCATTGGGTAT+GGG | 0.500436 | 8.3:+29216498 | None:intergenic |
| CTTACACAGCTTCAAGAGAT+GGG | 0.500998 | 8.3:-29213117 | MS.gene27239:CDS |
| AGTCGCTCCACCAGTTTGAC+CGG | 0.503983 | 8.3:+29214584 | None:intergenic |
| TACAGCACTTTCAGGGACTC+AGG | 0.506615 | 8.3:-29216586 | MS.gene27239:CDS |
| CTCAGCATGTTGAATCCCTC+AGG | 0.507902 | 8.3:+29216666 | None:intergenic |
| GGGATTAGTTGATTGGTCCC+TGG | 0.508862 | 8.3:+29216554 | None:intergenic |
| GGTATTGGTGCCACTACCAT+TGG | 0.511924 | 8.3:+29217109 | None:intergenic |
| TTTGGTGGCCTTGGAGCTGG+TGG | 0.513712 | 8.3:-29213924 | MS.gene27239:CDS |
| GCTTACACAGCTTCAAGAGA+TGG | 0.514614 | 8.3:-29213118 | MS.gene27239:CDS |
| GTGCCATTGGCACCTAGTCC+AGG | 0.515695 | 8.3:+29217008 | None:intergenic |
| AGGGTCTGGCGGAGAGTACT+GGG | 0.517192 | 8.3:+29216768 | None:intergenic |
| ACCATTTAACAACATGGGGT+TGG | 0.521909 | 8.3:-29213964 | MS.gene27239:CDS |
| GAGGACCAAGGATTAGGAAG+TGG | 0.522329 | 8.3:+29216480 | None:intergenic |
| ATACCTGACTCAAAGTTTGT+GGG | 0.522709 | 8.3:+29216129 | None:intergenic |
| TGAGTCAATAGAGCAGGATC+TGG | 0.523426 | 8.3:+29216203 | None:intergenic |
| ATGTTATCCAGCATGTTTGG+TGG | 0.523512 | 8.3:-29213939 | MS.gene27239:CDS |
| ATTAATTGAGTCAATAGAGC+AGG | 0.525143 | 8.3:+29216197 | None:intergenic |
| CCGGTAATACAGCACTTTCA+GGG | 0.525813 | 8.3:-29216593 | MS.gene27239:CDS |
| TTAAATGCCACTACAATGGC+CGG | 0.526256 | 8.3:-29216612 | MS.gene27239:CDS |
| AAGTGGGTTAGCATTGGGTA+TGG | 0.526308 | 8.3:+29216497 | None:intergenic |
| GACTCAGGGTGGCCTAGCCA+GGG | 0.528165 | 8.3:-29216571 | MS.gene27239:CDS |
| CGCGCCACCATGGGAGGTGA+CGG | 0.535486 | 8.3:-29218678 | None:intergenic |
| AACGGCACCGTCACCTCCCA+TGG | 0.537241 | 8.3:+29218671 | None:intergenic |
| AGCAGGACCATTTAACAACA+TGG | 0.538223 | 8.3:-29213970 | MS.gene27239:intron |
| CCATGAGCTCTTGCATCTGT+GGG | 0.540275 | 8.3:+29216826 | None:intergenic |
| GCCAGACCCTTGAAGCTACA+AGG | 0.540693 | 8.3:-29216755 | MS.gene27239:CDS |
| TGGGTGGCATACAATTGCTC+TGG | 0.545809 | 8.3:+29213141 | None:intergenic |
| GGTCAAACTGGTGGAGCGAC+TGG | 0.545814 | 8.3:-29214582 | MS.gene27239:intron |
| ATCTATTTGGAGCAGCTCCA+AGG | 0.549978 | 8.3:+29213901 | None:intergenic |
| TCCAAGGCCACCAAACATGC+TGG | 0.550161 | 8.3:+29213932 | None:intergenic |
| CTACAAAGGTCGTATATTGA+AGG | 0.553680 | 8.3:-29218487 | MS.gene27239:CDS |
| CTCCAAGGCCACCAGCTCCA+AGG | 0.554706 | 8.3:+29213916 | None:intergenic |
| ACTAATTCTGAAACAACTGC+TGG | 0.555289 | 8.3:-29216525 | MS.gene27239:CDS |
| GGGAGGTGACGGTGCCGTTG+AGG | 0.557401 | 8.3:-29218667 | MS.gene27239:CDS |
| GTGGCATACAATTGCTCTGG+TGG | 0.559784 | 8.3:+29213144 | None:intergenic |
| CTAGGTGCCAATGGCACTGG+GGG | 0.560080 | 8.3:-29217002 | MS.gene27239:CDS |
| CACCTACCAATGCGAGTGGT+GGG | 0.560646 | 8.3:-29217133 | MS.gene27239:CDS |
| TAAGTACGTGTGCTAGCTCA+GGG | 0.563115 | 8.3:+29216796 | None:intergenic |
| TTCGGTCTTCGATTCTGAAG+AGG | 0.566870 | 8.3:+29218641 | None:intergenic |
| GATCAAACGCTTCAAAGCTA+TGG | 0.568397 | 8.3:-29218462 | MS.gene27239:intron |
| TTTCCTGGACTAGGTGCCAA+TGG | 0.570527 | 8.3:-29217011 | MS.gene27239:CDS |
| GCAGGACCATTTAACAACAT+GGG | 0.571719 | 8.3:-29213969 | MS.gene27239:intron |
| AATGATGAGAAATACAGATA+GGG | 0.573067 | 8.3:-29216712 | MS.gene27239:CDS |
| AATGCGAGTGGTGGGACCAA+TGG | 0.573204 | 8.3:-29217125 | MS.gene27239:CDS |
| GCCTGCGGCATCATTTGTTG+TGG | 0.573432 | 8.3:+29217088 | None:intergenic |
| ATCAACGTTCGATGCTCCAA+CGG | 0.575718 | 8.3:-29218612 | MS.gene27239:CDS |
| TTGTAGCTTCAAGGGTCTGG+CGG | 0.576486 | 8.3:+29216757 | None:intergenic |
| TCATTTCACGCATGATCTCA+GGG | 0.577540 | 8.3:+29216730 | None:intergenic |
| ATTGGTCCCACCACTCGCAT+TGG | 0.578241 | 8.3:+29217127 | None:intergenic |
| CTGACTCAAAGTTTGTGGGT+TGG | 0.578647 | 8.3:+29216133 | None:intergenic |
| TGTATTACCGGCCATTGTAG+TGG | 0.584022 | 8.3:+29216605 | None:intergenic |
| GGCCTTGAAGGCATGCTGGG+TGG | 0.586106 | 8.3:-29216236 | MS.gene27239:CDS |
| GCACCTACCAATGCGAGTGG+TGG | 0.586343 | 8.3:-29217134 | MS.gene27239:CDS |
| CTGCCTAGCATCCCCACCAG+TGG | 0.588374 | 8.3:+29216295 | None:intergenic |
| ACCAGGAGATCAACCACTGG+TGG | 0.588857 | 8.3:-29216308 | MS.gene27239:CDS |
| GGGAAATAGCTTATTTGGCG+AGG | 0.590425 | 8.3:-29216982 | MS.gene27239:CDS |
| CAGGACCATTTAACAACATG+GGG | 0.591578 | 8.3:-29213968 | MS.gene27239:CDS |
| GGAAATAGCTTATTTGGCGA+GGG | 0.596820 | 8.3:-29216981 | MS.gene27239:CDS |
| AGGACCAAGGATTAGGAAGT+GGG | 0.602928 | 8.3:+29216481 | None:intergenic |
| TCAATCACCTGAGACAATGC+AGG | 0.609798 | 8.3:-29215929 | MS.gene27239:intron |
| CCAAGCCCTCCTAAGCCAGT+AGG | 0.609864 | 8.3:+29216266 | None:intergenic |
| GGTCAAACCGGTCAAACTGG+TGG | 0.610292 | 8.3:-29214591 | MS.gene27239:CDS |
| CTGAGGGATTCAACATGCTG+AGG | 0.611154 | 8.3:-29216665 | MS.gene27239:CDS |
| GATGAGACGTTGTTGTTGCG+CGG | 0.615096 | 8.3:+29218509 | None:intergenic |
| CCAGGAGATCAACCACTGGT+GGG | 0.616254 | 8.3:-29216307 | MS.gene27239:CDS |
| CAACATTGAATCATCTCCTG+AGG | 0.617136 | 8.3:-29216682 | MS.gene27239:CDS |
| TGCATGAACATTCCCCGAAG+TGG | 0.617953 | 8.3:+29213056 | None:intergenic |
| ACCACAACAAATGATGCCGC+AGG | 0.619817 | 8.3:-29217089 | MS.gene27239:CDS |
| TCGAACGTTGATGTTAACTT+CGG | 0.623450 | 8.3:+29218623 | None:intergenic |
| AGTGGTGGGACCAATGGTAG+TGG | 0.625451 | 8.3:-29217119 | MS.gene27239:CDS |
| ACAGCACTTTCAGGGACTCA+GGG | 0.626403 | 8.3:-29216585 | MS.gene27239:CDS |
| TATTCACGCGCCACCATGGG+AGG | 0.630382 | 8.3:-29218684 | None:intergenic |
| TGACACACAAGAGAACATAA+GGG | 0.632386 | 8.3:-29213088 | MS.gene27239:CDS |
| GAGCTCCCCAAAATAACACC+AGG | 0.633399 | 8.3:-29216325 | MS.gene27239:CDS |
| GTTCCCCAAAAGACGTTCAA+CGG | 0.635209 | 8.3:+29213032 | None:intergenic |
| TCAGAACTTACTACCTGTAG+AGG | 0.637124 | 8.3:+29216461 | None:intergenic |
| AACATTGAATCATCTCCTGA+GGG | 0.641839 | 8.3:-29216681 | MS.gene27239:CDS |
| TTCTGAAGAGGAATCCTCAA+CGG | 0.642408 | 8.3:+29218653 | None:intergenic |
| GAGATCCTTGAACGATCCAA+CGG | 0.643208 | 8.3:+29218554 | None:intergenic |
| TAAGTAACCCCGAGATAGTG+CGG | 0.645574 | 8.3:-29216866 | MS.gene27239:CDS |
| TGAGACGTTGTTGTTGCGCG+GGG | 0.647737 | 8.3:+29218511 | None:intergenic |
| GTCCCACCACTCGCATTGGT+AGG | 0.647985 | 8.3:+29217131 | None:intergenic |
| AAGCACCTACTGGCTTAGGA+GGG | 0.649188 | 8.3:-29216271 | MS.gene27239:CDS |
| TGAGATTCCGCACTATCTCG+GGG | 0.649860 | 8.3:+29216859 | None:intergenic |
| CAGGAGATCAACCACTGGTG+GGG | 0.651954 | 8.3:-29216306 | MS.gene27239:CDS |
| GCTGGAGCTAATGCTGCTGG+GGG | 0.653587 | 8.3:-29217065 | MS.gene27239:CDS |
| GGGCTCTTATTGCCACTTCG+GGG | 0.653708 | 8.3:-29213068 | MS.gene27239:CDS |
| CAACAACGTCTCATCTACAA+AGG | 0.654774 | 8.3:-29218501 | MS.gene27239:CDS |
| ACTAGGTGCCAATGGCACTG+GGG | 0.663959 | 8.3:-29217003 | MS.gene27239:CDS |
| CAGGTGATTGAAACAATCGT+AGG | 0.671504 | 8.3:+29215941 | None:intergenic |
| TTGAAGCTGTGTAAGCTGGG+TGG | 0.671589 | 8.3:+29213125 | None:intergenic |
| AACACCAGGAGATCAACCAC+TGG | 0.674049 | 8.3:-29216311 | MS.gene27239:CDS |
| TTACTACCTGTAGAGGACCA+AGG | 0.676377 | 8.3:+29216468 | None:intergenic |
| ATCCTTGAACGATCCAACGG+TGG | 0.677694 | 8.3:+29218557 | None:intergenic |
| TTTGCACCTACCAATGCGAG+TGG | 0.688990 | 8.3:-29217137 | MS.gene27239:CDS |
| GCACTTTCAGGGACTCAGGG+TGG | 0.695739 | 8.3:-29216582 | MS.gene27239:CDS |
| GGAATCGAGAGAAACCTGAA+CGG | 0.705383 | 8.3:+29218578 | None:intergenic |
| TGTCTCAGCAACAATCAACA+CGG | 0.740000 | 8.3:-29215474 | MS.gene27239:intron |
| GCTAATACTGAACAACGTGG+TGG | 0.756105 | 8.3:-29216012 | MS.gene27239:CDS |
| GCTGCTAATACTGAACAACG+TGG | 0.869316 | 8.3:-29216015 | MS.gene27239:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATATGGAAAAATAA+CGG | - | chr8.3:29215934-29215953 | MS.gene27239:CDS | 10.0% |
| !! | TAACAAATTCAAAATTAATA+TGG | - | chr8.3:29215923-29215942 | MS.gene27239:intron | 10.0% |
| !! | TTATGAATTTAATTATAGTT+AGG | - | chr8.3:29213350-29213369 | MS.gene27239:intron | 10.0% |
| !! | AAAAACAAATAAATACAAGA+AGG | + | chr8.3:29216452-29216471 | None:intergenic | 15.0% |
| !! | AATTAATATGGAAAAATAAC+GGG | - | chr8.3:29215935-29215954 | MS.gene27239:CDS | 15.0% |
| !! | ATGTATTGTAAATTATTCTA+TGG | - | chr8.3:29213462-29213481 | MS.gene27239:intron | 15.0% |
| !! | TAAATTCATTACTCATTATT+CGG | + | chr8.3:29218495-29218514 | None:intergenic | 15.0% |
| !! | TTAATATAATAGACCTATAT+TGG | - | chr8.3:29214388-29214407 | MS.gene27239:intron | 15.0% |
| !! | TTTACGAATTTAATGATATT+CGG | - | chr8.3:29213531-29213550 | MS.gene27239:intron | 15.0% |
| !! | TTTGTAATTTATTATAGGTT+TGG | - | chr8.3:29214497-29214516 | MS.gene27239:intron | 15.0% |
| !!! | AAAGTTATCATTTTATTGTT+TGG | - | chr8.3:29217976-29217995 | MS.gene27239:intron | 15.0% |
| !!! | ATTTTTAATTCACAATACTT+AGG | + | chr8.3:29216027-29216046 | None:intergenic | 15.0% |
| !!! | TCTCATTTTATTACTTAAAA+AGG | + | chr8.3:29217448-29217467 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGCTTTATTAATC+TGG | - | chr8.3:29217055-29217074 | MS.gene27239:CDS | 15.0% |
| !! | AAAAAATCTTCAAACAATGT+GGG | - | chr8.3:29218468-29218487 | MS.gene27239:CDS | 20.0% |
| !! | AAAAAGACTAATTTGAACAA+CGG | - | chr8.3:29215959-29215978 | MS.gene27239:CDS | 20.0% |
| !! | AAAACAACTATCAAATTACA+TGG | + | chr8.3:29216123-29216142 | None:intergenic | 20.0% |
| !! | AAAATCCAAAAGAAATGTTA+AGG | - | chr8.3:29216676-29216695 | MS.gene27239:CDS | 20.0% |
| !! | AAACAACTATCAAATTACAT+GGG | + | chr8.3:29216122-29216141 | None:intergenic | 20.0% |
| !! | ATAGATACTATTTAGGAATT+AGG | - | chr8.3:29217882-29217901 | MS.gene27239:intron | 20.0% |
| !! | ATCATTTCTCTCATTAAATT+GGG | + | chr8.3:29214777-29214796 | None:intergenic | 20.0% |
| !! | ATGTTTGAAAGTTTATAACT+GGG | + | chr8.3:29218437-29218456 | None:intergenic | 20.0% |
| !! | ATTATCATAAACCAAGATAA+TGG | + | chr8.3:29217147-29217166 | None:intergenic | 20.0% |
| !! | CAGTAACATTAAAAACATTT+AGG | - | chr8.3:29213666-29213685 | MS.gene27239:intron | 20.0% |
| !! | CTGCATTTGTAATTTATTAT+AGG | - | chr8.3:29214492-29214511 | MS.gene27239:intron | 20.0% |
| !! | GAATAACATTATAACAGTAA+AGG | + | chr8.3:29218386-29218405 | None:intergenic | 20.0% |
| !! | GATATCTTTCAATAAATATG+TGG | - | chr8.3:29215838-29215857 | MS.gene27239:intron | 20.0% |
| !! | TAAAAAATCTTCAAACAATG+TGG | - | chr8.3:29218467-29218486 | MS.gene27239:CDS | 20.0% |
| !! | TAAAAATTGGAATAAAAGTG+AGG | - | chr8.3:29218052-29218071 | MS.gene27239:intron | 20.0% |
| !! | TATGTTTGAAAGTTTATAAC+TGG | + | chr8.3:29218438-29218457 | None:intergenic | 20.0% |
| !! | TGAGATTTCTCAAAAATATA+TGG | + | chr8.3:29216639-29216658 | None:intergenic | 20.0% |
| !! | TGATTCAAAAATATCCAATT+GGG | + | chr8.3:29218408-29218427 | None:intergenic | 20.0% |
| !! | TGTATTATATATAACAGGTT+AGG | + | chr8.3:29216954-29216973 | None:intergenic | 20.0% |
| !! | TTAATTATGCAGCTTAAATA+TGG | + | chr8.3:29217563-29217582 | None:intergenic | 20.0% |
| !! | TTATCATAAACCAAGATAAT+GGG | + | chr8.3:29217146-29217165 | None:intergenic | 20.0% |
| !! | TTTGATTATGAAATACACTT+TGG | - | chr8.3:29217469-29217488 | MS.gene27239:intron | 20.0% |
| !!! | AAATTCGTTTGTTTAAAATG+TGG | - | chr8.3:29216065-29216084 | MS.gene27239:intron | 20.0% |
| !!! | AAATTGGGATTTGAAATAAA+TGG | + | chr8.3:29214762-29214781 | None:intergenic | 20.0% |
| !!! | ACCAAACTAACAAATTTTAT+TGG | + | chr8.3:29218336-29218355 | None:intergenic | 20.0% |
| !!! | ACCAATAAAATTTGTTAGTT+TGG | - | chr8.3:29218332-29218351 | MS.gene27239:intron | 20.0% |
| !!! | ATTGAATCATTCTCTTTTTT+TGG | + | chr8.3:29213779-29213798 | None:intergenic | 20.0% |
| !!! | CTATATATATGCATAGTTTT+TGG | + | chr8.3:29216489-29216508 | None:intergenic | 20.0% |
| !!! | TACTTTACTTTTTAGATTCT+TGG | - | chr8.3:29215650-29215669 | MS.gene27239:intron | 20.0% |
| !!! | TTAACATTTCTTTTGGATTT+TGG | + | chr8.3:29216677-29216696 | None:intergenic | 20.0% |
| !!! | TTGTTGTTTTAGTATTTCAT+TGG | - | chr8.3:29217189-29217208 | MS.gene27239:intron | 20.0% |
| !!! | TTGTTTGGATATTTTAATCA+TGG | - | chr8.3:29217991-29218010 | MS.gene27239:intron | 20.0% |
| !!! | TTTGCTTTATGTCATTTTTT+TGG | - | chr8.3:29213320-29213339 | MS.gene27239:intron | 20.0% |
| ! | AAAAAGTTAACAAGAACAGA+AGG | + | chr8.3:29217005-29217024 | None:intergenic | 25.0% |
| ! | AAAATGTAAACTAGAGACTT+GGG | + | chr8.3:29218192-29218211 | None:intergenic | 25.0% |
| ! | AAATGATGAGAAATACAGAT+AGG | - | chr8.3:29214976-29214995 | MS.gene27239:intron | 25.0% |
| ! | AAGTAAATATTAGAACGATC+AGG | + | chr8.3:29215635-29215654 | None:intergenic | 25.0% |
| ! | AATGATGAGAAATACAGATA+GGG | - | chr8.3:29214977-29214996 | MS.gene27239:intron | 25.0% |
| ! | AATTACTTAGAGTTGTTTGA+GGG | - | chr8.3:29216909-29216928 | MS.gene27239:CDS | 25.0% |
| ! | ACAGAGATATTAAAAGATCT+TGG | + | chr8.3:29216556-29216575 | None:intergenic | 25.0% |
| ! | ATTGTAGTGGCATTTAAAAA+TGG | + | chr8.3:29215074-29215093 | None:intergenic | 25.0% |
| ! | CATCATTTCTCTCATTAAAT+TGG | + | chr8.3:29214778-29214797 | None:intergenic | 25.0% |
| ! | CTGAACATTGAAGAATATAA+TGG | - | chr8.3:29217292-29217311 | MS.gene27239:intron | 25.0% |
| ! | GAAAGAATAAACACATTCAA+AGG | + | chr8.3:29214439-29214458 | None:intergenic | 25.0% |
| ! | GAAGACAACAAAAAAAATCT+AGG | + | chr8.3:29218519-29218538 | None:intergenic | 25.0% |
| ! | GAATTTAATGATATTCGGTT+AGG | - | chr8.3:29213536-29213555 | MS.gene27239:intron | 25.0% |
| ! | GAGACTGTATTATATATAAC+AGG | + | chr8.3:29216959-29216978 | None:intergenic | 25.0% |
| ! | GCATATGATAGATACTATTT+AGG | - | chr8.3:29217875-29217894 | MS.gene27239:intron | 25.0% |
| ! | GGCAATTCATAAATAAAAGT+AGG | - | chr8.3:29217516-29217535 | MS.gene27239:intron | 25.0% |
| ! | GTAATTTATTATAGGTTTGG+AGG | - | chr8.3:29214500-29214519 | MS.gene27239:intron | 25.0% |
| ! | GTGATTCAAAAATATCCAAT+TGG | + | chr8.3:29218409-29218428 | None:intergenic | 25.0% |
| ! | GTTATAATGTTATTCCCAAT+TGG | - | chr8.3:29218391-29218410 | MS.gene27239:intron | 25.0% |
| ! | TAATTACTTAGAGTTGTTTG+AGG | - | chr8.3:29216908-29216927 | MS.gene27239:CDS | 25.0% |
| ! | TATCATAAACCAAGATAATG+GGG | + | chr8.3:29217145-29217164 | None:intergenic | 25.0% |
| ! | TGACTAATGCTGTAATTTAT+GGG | - | chr8.3:29215327-29215346 | MS.gene27239:intron | 25.0% |
| ! | TTCATAAATAAAAGTAGGCA+TGG | - | chr8.3:29217521-29217540 | MS.gene27239:intron | 25.0% |
| ! | TTTGGATATTTAATGCATGA+TGG | - | chr8.3:29217910-29217929 | MS.gene27239:intron | 25.0% |
| !! | AATTTTCAAAATATCCGATC+TGG | - | chr8.3:29218359-29218378 | MS.gene27239:intron | 25.0% |
| !! | ATTTTTAAATGCCACTACAA+TGG | - | chr8.3:29215073-29215092 | MS.gene27239:intron | 25.0% |
| !! | TCTCTAAGAGAATTTAAATC+AGG | + | chr8.3:29215707-29215726 | None:intergenic | 25.0% |
| !!! | AGATCGGATATTTTGAAAAT+TGG | + | chr8.3:29218360-29218379 | None:intergenic | 25.0% |
| !!! | ATGCTGTTTGATTTAGTTTT+AGG | - | chr8.3:29213397-29213416 | MS.gene27239:intron | 25.0% |
| !!! | ATTCTTTTTTTTTAATGGCG+CGG | + | chr8.3:29217358-29217377 | None:intergenic | 25.0% |
| !!! | TATATTTGGATTGGTAGAAA+TGG | + | chr8.3:29218165-29218184 | None:intergenic | 25.0% |
| !!! | TATCTACTTGTTTTATTAGC+AGG | - | chr8.3:29217702-29217721 | MS.gene27239:intron | 25.0% |
| !!! | TCTAGTTTACATTTTGTATC+CGG | - | chr8.3:29218197-29218216 | MS.gene27239:intron | 25.0% |
| !!! | TGGATATTTTAATCATGGAA+TGG | - | chr8.3:29217996-29218015 | MS.gene27239:intron | 25.0% |
| !!! | TTAAAAGATCTTGGTTTTCA+AGG | + | chr8.3:29216547-29216566 | None:intergenic | 25.0% |
| !!! | TTGGATATTTTTGAATCACT+AGG | - | chr8.3:29218410-29218429 | MS.gene27239:intron | 25.0% |
| !!! | TTTTTGAAAATGAAGCTTGA+GGG | - | chr8.3:29214207-29214226 | MS.gene27239:intron | 25.0% |
| !!! | TTTTTTGAAAATGAAGCTTG+AGG | - | chr8.3:29214206-29214225 | MS.gene27239:intron | 25.0% |
| AAATGAGCCATCTTAGTATA+AGG | + | chr8.3:29216400-29216419 | None:intergenic | 30.0% | |
| AATTCAAAATGCGTAGCTTA+TGG | - | chr8.3:29213796-29213815 | MS.gene27239:intron | 30.0% | |
| ATCTTCTATTAGTTCAGAAG+CGG | + | chr8.3:29214076-29214095 | None:intergenic | 30.0% | |
| ATTAATTGAGTCAATAGAGC+AGG | + | chr8.3:29215495-29215514 | None:intergenic | 30.0% | |
| ATTCAGGTAAACAGGAAATT+TGG | - | chr8.3:29217418-29217437 | MS.gene27239:intron | 30.0% | |
| CAAAATGTAAACTAGAGACT+TGG | + | chr8.3:29218193-29218212 | None:intergenic | 30.0% | |
| CAAATAAATACAAGAAGGCT+TGG | + | chr8.3:29216447-29216466 | None:intergenic | 30.0% | |
| CAAATTAACTACATCGAGAT+CGG | + | chr8.3:29213265-29213284 | None:intergenic | 30.0% | |
| CGAATCAATGAATTAACTAG+TGG | - | chr8.3:29213614-29213633 | MS.gene27239:intron | 30.0% | |
| CTAAAAGTAAGCTGAATTCA+GGG | - | chr8.3:29218277-29218296 | MS.gene27239:intron | 30.0% | |
| CTTGGACAACTACATATTTA+TGG | + | chr8.3:29216429-29216448 | None:intergenic | 30.0% | |
| GACTAATGCTGTAATTTATG+GGG | - | chr8.3:29215328-29215347 | MS.gene27239:intron | 30.0% | |
| GGTATTGTAGATTATTCCAT+GGG | - | chr8.3:29213557-29213576 | MS.gene27239:intron | 30.0% | |
| GTGACTAATGCTGTAATTTA+TGG | - | chr8.3:29215326-29215345 | MS.gene27239:intron | 30.0% | |
| GTGATGTGAATTATGCTTAT+AGG | - | chr8.3:29213831-29213850 | MS.gene27239:intron | 30.0% | |
| TAAAGTCAACTACTCAAGTA+TGG | + | chr8.3:29217247-29217266 | None:intergenic | 30.0% | |
| TAATCATGGAATGGAAGAAA+AGG | - | chr8.3:29218005-29218024 | MS.gene27239:intron | 30.0% | |
| TAATGCATGATGGTACATAA+TGG | - | chr8.3:29217920-29217939 | MS.gene27239:intron | 30.0% | |
| TATCAAAGAATCGCCAATAT+AGG | + | chr8.3:29214404-29214423 | None:intergenic | 30.0% | |
| TCAATGAATTAACTAGTGGT+TGG | - | chr8.3:29213618-29213637 | MS.gene27239:intron | 30.0% | |
| TCACATAAGTACAACTCAAA+TGG | - | chr8.3:29213899-29213918 | MS.gene27239:CDS | 30.0% | |
| TCCACTAGAAAAATCTAGTT+AGG | - | chr8.3:29218224-29218243 | MS.gene27239:intron | 30.0% | |
| TCTAAAAGTAAGCTGAATTC+AGG | - | chr8.3:29218276-29218295 | MS.gene27239:intron | 30.0% | |
| TGCTAACCATTTGATCTATT+TGG | + | chr8.3:29217804-29217823 | None:intergenic | 30.0% | |
| TGTCATTGTATAATGAGACA+GGG | + | chr8.3:29216166-29216185 | None:intergenic | 30.0% | |
| TTCTGAACTAATAGAAGATG+TGG | - | chr8.3:29214077-29214096 | MS.gene27239:intron | 30.0% | |
| TTGGAATAAAAGTGAGGTAT+TGG | - | chr8.3:29218058-29218077 | MS.gene27239:intron | 30.0% | |
| TTGGGCTTATATATTTGGAT+TGG | + | chr8.3:29218174-29218193 | None:intergenic | 30.0% | |
| TTTAGGAATTAGGCTATGTT+TGG | - | chr8.3:29217892-29217911 | MS.gene27239:intron | 30.0% | |
| ! | AAAACCAATTTGTTCCCAAA+AGG | + | chr8.3:29214148-29214167 | None:intergenic | 30.0% |
| ! | ACCTAACTAGATTTTTCTAG+TGG | + | chr8.3:29218228-29218247 | None:intergenic | 30.0% |
| ! | AGGTATTGTAGATTATTCCA+TGG | - | chr8.3:29213556-29213575 | MS.gene27239:intron | 30.0% |
| ! | ATCATAAACCAAGATAATGG+GGG | + | chr8.3:29217144-29217163 | None:intergenic | 30.0% |
| ! | ATGTGCATTAACAACTCTTT+TGG | - | chr8.3:29217588-29217607 | MS.gene27239:intron | 30.0% |
| ! | CAATTTTTATTGCGAGAAGT+GGG | + | chr8.3:29218041-29218060 | None:intergenic | 30.0% |
| ! | CACTTCCTTAACATTTCTTT+TGG | + | chr8.3:29216684-29216703 | None:intergenic | 30.0% |
| ! | CATAATGGAACAAAACAGAA+TGG | - | chr8.3:29217935-29217954 | MS.gene27239:intron | 30.0% |
| ! | CTCGATGTAGTTAATTTGAT+TGG | - | chr8.3:29213267-29213286 | MS.gene27239:intron | 30.0% |
| ! | TTTTTCTACCTATCCTTGAA+AGG | - | chr8.3:29216280-29216299 | MS.gene27239:CDS | 30.0% |
| !! | AAAATGTCTTTAAAACGAGC+TGG | + | chr8.3:29215270-29215289 | None:intergenic | 30.0% |
| !! | AAATGTCTTTAAAACGAGCT+GGG | + | chr8.3:29215269-29215288 | None:intergenic | 30.0% |
| !! | AATAAAAGTGAGGTATTGGA+TGG | - | chr8.3:29218062-29218081 | MS.gene27239:intron | 30.0% |
| !! | AGGTTTAAAGTTTTATGCAG+TGG | - | chr8.3:29216882-29216901 | MS.gene27239:CDS | 30.0% |
| !! | GTAGAGTTTGTTGTTTGTTT+GGG | - | chr8.3:29213688-29213707 | MS.gene27239:intron | 30.0% |
| !! | TAGAGTTTGTTGTTTGTTTG+GGG | - | chr8.3:29213689-29213708 | MS.gene27239:intron | 30.0% |
| !! | TTTTGAAAATGAAGCTTGAG+GGG | - | chr8.3:29214208-29214227 | MS.gene27239:intron | 30.0% |
| !!! | TGGTTTTTTTAACGAGTTTC+TGG | - | chr8.3:29214237-29214256 | MS.gene27239:intron | 30.0% |
| !!! | TTCTTTTTTTTTAATGGCGC+GGG | + | chr8.3:29217357-29217376 | None:intergenic | 30.0% |
| AACATTGAATCATCTCCTGA+GGG | - | chr8.3:29215008-29215027 | MS.gene27239:intron | 35.0% | |
| AAGAAGTCTTCTTGAAACTG+TGG | - | chr8.3:29218306-29218325 | MS.gene27239:intron | 35.0% | |
| ACAATACAACTCAAACCTCT+TGG | - | chr8.3:29216823-29216842 | MS.gene27239:CDS | 35.0% | |
| ACATTTGATATGCTGGAATG+CGG | - | chr8.3:29213933-29213952 | MS.gene27239:CDS | 35.0% | |
| ACTAATAGAAGATGTGGTGT+TGG | - | chr8.3:29214083-29214102 | MS.gene27239:intron | 35.0% | |
| AGAAGTCTTCTTGAAACTGT+GGG | - | chr8.3:29218307-29218326 | MS.gene27239:intron | 35.0% | |
| AGTATAAGGTCAGTTGCAAT+GGG | + | chr8.3:29216386-29216405 | None:intergenic | 35.0% | |
| ATAACAGTAAAGGACCAGAT+CGG | + | chr8.3:29218376-29218395 | None:intergenic | 35.0% | |
| ATACCTGACTCAAAGTTTGT+GGG | + | chr8.3:29215563-29215582 | None:intergenic | 35.0% | |
| ATCTTCATTCAGAGAACAAG+TGG | + | chr8.3:29217400-29217419 | None:intergenic | 35.0% | |
| ATTATACTCAAGCAAACCCA+TGG | + | chr8.3:29213576-29213595 | None:intergenic | 35.0% | |
| CAACTGACCTTATACTAAGA+TGG | - | chr8.3:29216390-29216409 | MS.gene27239:intron | 35.0% | |
| CATAAGTACAACTCAAATGG+TGG | - | chr8.3:29213902-29213921 | MS.gene27239:CDS | 35.0% | |
| CCAAGCAGTTAAACATGTTA+TGG | - | chr8.3:29218132-29218151 | MS.gene27239:intron | 35.0% | |
| CCACTTCTCGCAATAAAAAT+TGG | - | chr8.3:29218039-29218058 | MS.gene27239:intron | 35.0% | |
| CCATAACATGTTTAACTGCT+TGG | + | chr8.3:29218135-29218154 | None:intergenic | 35.0% | |
| CTACAAAGGTCGTATATTGA+AGG | - | chr8.3:29213202-29213221 | MS.gene27239:intron | 35.0% | |
| CTACCAACTCAGATATTGTT+AGG | - | chr8.3:29217495-29217514 | MS.gene27239:intron | 35.0% | |
| CTGTCATTGTATAATGAGAC+AGG | + | chr8.3:29216167-29216186 | None:intergenic | 35.0% | |
| CTGTTCACAATTACCAAAAG+AGG | - | chr8.3:29216572-29216591 | MS.gene27239:CDS | 35.0% | |
| GAAGTTCACAATAGAAGATG+CGG | - | chr8.3:29213869-29213888 | MS.gene27239:intron | 35.0% | |
| GAATGAAGATTCAGGTAAAC+AGG | - | chr8.3:29217410-29217429 | MS.gene27239:intron | 35.0% | |
| GAGACTTGGGCTTATATATT+TGG | + | chr8.3:29218179-29218198 | None:intergenic | 35.0% | |
| GTTTCAGAATTAGTGGTTGA+GGG | + | chr8.3:29215158-29215177 | None:intergenic | 35.0% | |
| TAACACCTTGGACAGTAAAA+TGG | + | chr8.3:29216515-29216534 | None:intergenic | 35.0% | |
| TAGTATAAGGTCAGTTGCAA+TGG | + | chr8.3:29216387-29216406 | None:intergenic | 35.0% | |
| TCGAACGTTGATGTTAACTT+CGG | + | chr8.3:29213069-29213088 | None:intergenic | 35.0% | |
| TCTAGTTAGGTTCTTGCTTA+CGG | - | chr8.3:29218237-29218256 | MS.gene27239:intron | 35.0% | |
| TCTTCTATTAGTTCAGAAGC+GGG | + | chr8.3:29214075-29214094 | None:intergenic | 35.0% | |
| TGACACACAAGAGAACATAA+GGG | - | chr8.3:29218601-29218620 | MS.gene27239:CDS | 35.0% | |
| TGGAACAAAACAGAATGGTT+TGG | - | chr8.3:29217940-29217959 | MS.gene27239:intron | 35.0% | |
| TGTTCTCTGAATGAAGATTC+AGG | - | chr8.3:29217402-29217421 | MS.gene27239:intron | 35.0% | |
| TGTTTCAGAATTAGTGGTTG+AGG | + | chr8.3:29215159-29215178 | None:intergenic | 35.0% | |
| TTGACACACAAGAGAACATA+AGG | - | chr8.3:29218600-29218619 | MS.gene27239:CDS | 35.0% | |
| TTGCCTAACAATATCTGAGT+TGG | + | chr8.3:29217501-29217520 | None:intergenic | 35.0% | |
| ! | AAGGCAAAAATCTCCTCTTT+TGG | + | chr8.3:29216588-29216607 | None:intergenic | 35.0% |
| ! | AGCAGTTGTTTCAGAATTAG+TGG | + | chr8.3:29215165-29215184 | None:intergenic | 35.0% |
| ! | CCAATTTTTATTGCGAGAAG+TGG | + | chr8.3:29218042-29218061 | None:intergenic | 35.0% |
| ! | TGCATTAACAACTCTTTTGG+AGG | - | chr8.3:29217591-29217610 | MS.gene27239:intron | 35.0% |
| !! | AAGTTAGGTGATGGCTATTT+TGG | - | chr8.3:29217623-29217642 | MS.gene27239:intron | 35.0% |
| !! | ACTAATTCTGAAACAACTGC+TGG | - | chr8.3:29215164-29215183 | MS.gene27239:intron | 35.0% |
| !! | ATTAACAACTCTTTTGGAGG+CGG | - | chr8.3:29217594-29217613 | MS.gene27239:intron | 35.0% |
| !! | GGTAGAGTTTGTTGTTTGTT+TGG | - | chr8.3:29213687-29213706 | MS.gene27239:intron | 35.0% |
| !! | TCATAAACCAAGATAATGGG+GGG | + | chr8.3:29217143-29217162 | None:intergenic | 35.0% |
| !!! | TGATCTCCTGGTGTTATTTT+GGG | + | chr8.3:29215373-29215392 | None:intergenic | 35.0% |
| !!! | TTGATCTCCTGGTGTTATTT+TGG | + | chr8.3:29215374-29215393 | None:intergenic | 35.0% |
| AACGGAATACTTTGTACCGT+TGG | + | chr8.3:29213096-29213115 | None:intergenic | 40.0% | |
| ACAATAGAAGATGCGGTGTT+AGG | - | chr8.3:29213876-29213895 | MS.gene27239:intron | 40.0% | |
| ACCATTTAACAACATGGGGT+TGG | - | chr8.3:29217725-29217744 | MS.gene27239:intron | 40.0% | |
| ACTATAACCCCCCATTATCT+TGG | - | chr8.3:29217133-29217152 | MS.gene27239:CDS | 40.0% | |
| ACTGGGGGAAATAGCTTATT+TGG | - | chr8.3:29214702-29214721 | MS.gene27239:intron | 40.0% | |
| AGCAGGACCATTTAACAACA+TGG | - | chr8.3:29217719-29217738 | MS.gene27239:intron | 40.0% | |
| AGGATAGACTCATAACACCT+TGG | + | chr8.3:29216527-29216546 | None:intergenic | 40.0% | |
| ATCATTTCACGCATGATCTC+AGG | + | chr8.3:29214963-29214982 | None:intergenic | 40.0% | |
| ATGTTATCCAGCATGTTTGG+TGG | - | chr8.3:29217750-29217769 | MS.gene27239:intron | 40.0% | |
| CAACAACGTCTCATCTACAA+AGG | - | chr8.3:29213188-29213207 | MS.gene27239:intron | 40.0% | |
| CAACATTGAATCATCTCCTG+AGG | - | chr8.3:29215007-29215026 | MS.gene27239:intron | 40.0% | |
| CAGGACCATTTAACAACATG+GGG | - | chr8.3:29217721-29217740 | MS.gene27239:intron | 40.0% | |
| CAGGTGATTGAAACAATCGT+AGG | + | chr8.3:29215751-29215770 | None:intergenic | 40.0% | |
| CATTTGATATGCTGGAATGC+GGG | - | chr8.3:29213934-29213953 | MS.gene27239:CDS | 40.0% | |
| CGTCAATGTCATAGGTCAAA+TGG | - | chr8.3:29215982-29216001 | MS.gene27239:CDS | 40.0% | |
| CTTACACAGCTTCAAGAGAT+GGG | - | chr8.3:29218572-29218591 | MS.gene27239:CDS | 40.0% | |
| CTTACTAGATTCTGCATAGC+AGG | + | chr8.3:29214807-29214826 | None:intergenic | 40.0% | |
| CTTCTATTAGTTCAGAAGCG+GGG | + | chr8.3:29214074-29214093 | None:intergenic | 40.0% | |
| GAAGTCTTCTTGAAACTGTG+GGG | - | chr8.3:29218308-29218327 | MS.gene27239:intron | 40.0% | |
| GAGATGTTATCCAGCATGTT+TGG | - | chr8.3:29217747-29217766 | MS.gene27239:intron | 40.0% | |
| GATACCTGACTCAAAGTTTG+TGG | + | chr8.3:29215564-29215583 | None:intergenic | 40.0% | |
| GATCAAACGCTTCAAAGCTA+TGG | - | chr8.3:29213227-29213246 | MS.gene27239:intron | 40.0% | |
| GCAGGACCATTTAACAACAT+GGG | - | chr8.3:29217720-29217739 | MS.gene27239:intron | 40.0% | |
| GCTGCTCCAAATAGATCAAA+TGG | - | chr8.3:29217795-29217814 | MS.gene27239:intron | 40.0% | |
| GGAAATAGCTTATTTGGCGA+GGG | - | chr8.3:29214708-29214727 | MS.gene27239:intron | 40.0% | |
| GGTACGTAATTACACAACTC+TGG | - | chr8.3:29216236-29216255 | MS.gene27239:CDS | 40.0% | |
| GTATAAGGTCAGTTGCAATG+GGG | + | chr8.3:29216385-29216404 | None:intergenic | 40.0% | |
| GTGACTGTGACTTAAACACA+AGG | - | chr8.3:29216862-29216881 | MS.gene27239:CDS | 40.0% | |
| TAATCTGGCATCTTGTTGCA+GGG | - | chr8.3:29217070-29217089 | MS.gene27239:CDS | 40.0% | |
| TACTTAGAGTTGTTTGAGGG+TGG | - | chr8.3:29216912-29216931 | MS.gene27239:CDS | 40.0% | |
| TATGAGATTCCGCACTATCT+CGG | + | chr8.3:29214835-29214854 | None:intergenic | 40.0% | |
| TCAGAACTTACTACCTGTAG+AGG | + | chr8.3:29215231-29215250 | None:intergenic | 40.0% | |
| TCATTTCACGCATGATCTCA+GGG | + | chr8.3:29214962-29214981 | None:intergenic | 40.0% | |
| TCCAACCCCATGTTGTTAAA+TGG | + | chr8.3:29217729-29217748 | None:intergenic | 40.0% | |
| TGAAACAATCGTAGGAACTC+TGG | + | chr8.3:29215743-29215762 | None:intergenic | 40.0% | |
| TGCATCATTTGTGAGATAGC+TGG | + | chr8.3:29215525-29215544 | None:intergenic | 40.0% | |
| TGCGTAGCTTATGGTTGATT+AGG | - | chr8.3:29213805-29213824 | MS.gene27239:intron | 40.0% | |
| TGCTGCATTTGTTCAAGATC+CGG | + | chr8.3:29214738-29214757 | None:intergenic | 40.0% | |
| TGTCTCAGCAACAATCAACA+CGG | - | chr8.3:29216215-29216234 | MS.gene27239:CDS | 40.0% | |
| TGTGTTTAAGTCACAGTCAC+TGG | + | chr8.3:29216862-29216881 | None:intergenic | 40.0% | |
| TTAAATGCCACTACAATGGC+CGG | - | chr8.3:29215077-29215096 | MS.gene27239:intron | 40.0% | |
| TTAATCTGGCATCTTGTTGC+AGG | - | chr8.3:29217069-29217088 | MS.gene27239:CDS | 40.0% | |
| TTCCTAGTTTACTCGCACAA+AGG | + | chr8.3:29216607-29216626 | None:intergenic | 40.0% | |
| TTGCATCATGTACTCGTACA+AGG | + | chr8.3:29215598-29215617 | None:intergenic | 40.0% | |
| ! | AGCTTCCATTTTACTGTCCA+AGG | - | chr8.3:29216507-29216526 | MS.gene27239:CDS | 40.0% |
| ! | TCTCACTCATGCTTCCTTTT+GGG | - | chr8.3:29214131-29214150 | MS.gene27239:intron | 40.0% |
| ! | TTCTCACTCATGCTTCCTTT+TGG | - | chr8.3:29214130-29214149 | MS.gene27239:intron | 40.0% |
| ! | TTCTGAAGAGGAATCCTCAA+CGG | + | chr8.3:29213039-29213058 | None:intergenic | 40.0% |
| ! | TTTGGAGCTTCATTGTTTCC+TGG | - | chr8.3:29214663-29214682 | MS.gene27239:intron | 40.0% |
| ! | TTTTATTGCGAGAAGTGGGA+TGG | + | chr8.3:29218037-29218056 | None:intergenic | 40.0% |
| !! | ACGAGTTTCTGGTTTCGATT+TGG | - | chr8.3:29214248-29214267 | MS.gene27239:intron | 40.0% |
| !! | ATTAGGAAGTGGGTTAGCAT+TGG | + | chr8.3:29215201-29215220 | None:intergenic | 40.0% |
| !! | CAAAACAGAATGGTTTGGTG+TGG | - | chr8.3:29217945-29217964 | MS.gene27239:intron | 40.0% |
| !! | GATTTTTCTAGTGGAAGAGC+CGG | + | chr8.3:29218219-29218238 | None:intergenic | 40.0% |
| !! | GCTTCCTTTTGGGAACAAAT+TGG | - | chr8.3:29214141-29214160 | MS.gene27239:intron | 40.0% |
| !! | GGCATCATTTGTTGTGGTAT+TGG | + | chr8.3:29214598-29214617 | None:intergenic | 40.0% |
| !! | TGGTTGAGGGATTAGTTGAT+TGG | + | chr8.3:29215145-29215164 | None:intergenic | 40.0% |
| !! | TTAGGAAGTGGGTTAGCATT+GGG | + | chr8.3:29215200-29215219 | None:intergenic | 40.0% |
| !!! | CGGAGTTTTAAGTTAGGTGA+TGG | - | chr8.3:29217614-29217633 | MS.gene27239:intron | 40.0% |
| !!! | GATCTCCTGGTGTTATTTTG+GGG | + | chr8.3:29215372-29215391 | None:intergenic | 40.0% |
| AAAATGAAGCTTGAGGGGAC+GGG | - | chr8.3:29214213-29214232 | MS.gene27239:intron | 45.0% | |
| AACAACGGCGTCAATGTCAT+AGG | - | chr8.3:29215974-29215993 | MS.gene27239:CDS | 45.0% | |
| AATTCCCCGCTTAGAAGATG+CGG | - | chr8.3:29213968-29213987 | MS.gene27239:CDS | 45.0% | |
| AGGACCAAGGATTAGGAAGT+GGG | + | chr8.3:29215211-29215230 | None:intergenic | 45.0% | |
| AGGGTGGTTTACATTTGTGC+TGG | - | chr8.3:29216928-29216947 | MS.gene27239:CDS | 45.0% | |
| AGGGTTCCTTGTAGCTTCAA+GGG | + | chr8.3:29214943-29214962 | None:intergenic | 45.0% | |
| ATCAACGTTCGATGCTCCAA+CGG | - | chr8.3:29213077-29213096 | MS.gene27239:CDS | 45.0% | |
| ATGAGATTCCGCACTATCTC+GGG | + | chr8.3:29214834-29214853 | None:intergenic | 45.0% | |
| CAACCCACAAACTTTGAGTC+AGG | - | chr8.3:29215557-29215576 | MS.gene27239:intron | 45.0% | |
| CAACTCAAACCTCTTGGAAC+CGG | - | chr8.3:29216829-29216848 | MS.gene27239:CDS | 45.0% | |
| CACAGTCACTGGTAAGAATC+CGG | + | chr8.3:29216851-29216870 | None:intergenic | 45.0% | |
| CCAACAAGTCTCGAGAGAAT+AGG | - | chr8.3:29213713-29213732 | MS.gene27239:intron | 45.0% | |
| CCGGTAATACAGCACTTTCA+GGG | - | chr8.3:29215096-29215115 | MS.gene27239:intron | 45.0% | |
| CCTATTCTCTCGAGACTTGT+TGG | + | chr8.3:29213716-29213735 | None:intergenic | 45.0% | |
| CTAACACCGCATCTTCTAAG+CGG | + | chr8.3:29213977-29213996 | None:intergenic | 45.0% | |
| CTAACCCACTTCCTAATCCT+TGG | - | chr8.3:29215204-29215223 | MS.gene27239:intron | 45.0% | |
| CTCTTGAAGCTGTGTAAGCT+GGG | + | chr8.3:29218570-29218589 | None:intergenic | 45.0% | |
| CTGACTCAAAGTTTGTGGGT+TGG | + | chr8.3:29215559-29215578 | None:intergenic | 45.0% | |
| CTTATTTGGCGAGGGATTTC+CGG | - | chr8.3:29214716-29214735 | MS.gene27239:intron | 45.0% | |
| GAAAATGAAGCTTGAGGGGA+CGG | - | chr8.3:29214212-29214231 | MS.gene27239:intron | 45.0% | |
| GAAGTTCTCGTGTCCTTTCA+AGG | + | chr8.3:29216296-29216315 | None:intergenic | 45.0% | |
| GAGATCCTTGAACGATCCAA+CGG | + | chr8.3:29213138-29213157 | None:intergenic | 45.0% | |
| GCTAATACTGAACAACGTGG+TGG | - | chr8.3:29215677-29215696 | MS.gene27239:intron | 45.0% | |
| GCTGCTAATACTGAACAACG+TGG | - | chr8.3:29215674-29215693 | MS.gene27239:intron | 45.0% | |
| GCTTACACAGCTTCAAGAGA+TGG | - | chr8.3:29218571-29218590 | MS.gene27239:CDS | 45.0% | |
| GCTTCATTGTTTCCTGGACT+AGG | - | chr8.3:29214669-29214688 | MS.gene27239:intron | 45.0% | |
| GGAATCGAGAGAAACCTGAA+CGG | + | chr8.3:29213114-29213133 | None:intergenic | 45.0% | |
| GGGAAATAGCTTATTTGGCG+AGG | - | chr8.3:29214707-29214726 | MS.gene27239:intron | 45.0% | |
| GTTCCCCAAAAGACGTTCAA+CGG | + | chr8.3:29218660-29218679 | None:intergenic | 45.0% | |
| TAACACCGCATCTTCTAAGC+GGG | + | chr8.3:29213976-29213995 | None:intergenic | 45.0% | |
| TAAGTAACCCCGAGATAGTG+CGG | - | chr8.3:29214823-29214842 | MS.gene27239:intron | 45.0% | |
| TAAGTACGTGTGCTAGCTCA+GGG | + | chr8.3:29214896-29214915 | None:intergenic | 45.0% | |
| TCAATCACCTGAGACAATGC+AGG | - | chr8.3:29215760-29215779 | MS.gene27239:intron | 45.0% | |
| TCTCGTGTCCTTTCAAGGAT+AGG | + | chr8.3:29216291-29216310 | None:intergenic | 45.0% | |
| TCTCTTGAAGCTGTGTAAGC+TGG | + | chr8.3:29218571-29218590 | None:intergenic | 45.0% | |
| TGAGTCAATAGAGCAGGATC+TGG | + | chr8.3:29215489-29215508 | None:intergenic | 45.0% | |
| TGCCTTTGTGCGAGTAAACT+AGG | - | chr8.3:29216602-29216621 | MS.gene27239:CDS | 45.0% | |
| TGCTGGGACATTTGATATGC+TGG | - | chr8.3:29213926-29213945 | MS.gene27239:CDS | 45.0% | |
| TGTATTACCGGCCATTGTAG+TGG | + | chr8.3:29215087-29215106 | None:intergenic | 45.0% | |
| TGTTGGATGTGGGATGTGAA+GGG | - | chr8.3:29214100-29214119 | MS.gene27239:intron | 45.0% | |
| TTAAGTACGTGTGCTAGCTC+AGG | + | chr8.3:29214897-29214916 | None:intergenic | 45.0% | |
| TTACTACCTGTAGAGGACCA+AGG | + | chr8.3:29215224-29215243 | None:intergenic | 45.0% | |
| TTTATGGGGAACAATGCAGC+TGG | - | chr8.3:29215342-29215361 | MS.gene27239:intron | 45.0% | |
| ! | AAGGGCTCTTATTGCCACTT+CGG | - | chr8.3:29218619-29218638 | MS.gene27239:CDS | 45.0% |
| ! | AGAAGATGTGGTGTTGGATG+TGG | - | chr8.3:29214089-29214108 | MS.gene27239:intron | 45.0% |
| ! | ATCTATTTGGAGCAGCTCCA+AGG | + | chr8.3:29217791-29217810 | None:intergenic | 45.0% |
| ! | CGGTACAAAGTATTCCGTTC+AGG | - | chr8.3:29213097-29213116 | MS.gene27239:CDS | 45.0% |
| ! | GAAGATGTGGTGTTGGATGT+GGG | - | chr8.3:29214090-29214109 | MS.gene27239:intron | 45.0% |
| ! | TTCGGTCTTCGATTCTGAAG+AGG | + | chr8.3:29213051-29213070 | None:intergenic | 45.0% |
| !! | AAGTGGGTTAGCATTGGGTA+TGG | + | chr8.3:29215195-29215214 | None:intergenic | 45.0% |
| !! | AGTGGGTTAGCATTGGGTAT+GGG | + | chr8.3:29215194-29215213 | None:intergenic | 45.0% |
| !! | CCCTGAAAGTGCTGTATTAC+CGG | + | chr8.3:29215099-29215118 | None:intergenic | 45.0% |
| !! | CTGGTCTTTTCATTCTCAGC+TGG | - | chr8.3:29216255-29216274 | MS.gene27239:CDS | 45.0% |
| !! | GTCTTTAAAACGAGCTGGGT+TGG | + | chr8.3:29215265-29215284 | None:intergenic | 45.0% |
| !!! | TGCAATGGGGTTTTAGACAC+AGG | + | chr8.3:29216372-29216391 | None:intergenic | 45.0% |
| !!! | TGGAGGCGGAGTTTTAAGTT+AGG | - | chr8.3:29217608-29217627 | MS.gene27239:intron | 45.0% |
| !!! | ATATTATTCTTTTTTTTTAA+TGG | + | chr8.3:29217363-29217382 | None:intergenic | 5.0% |
| !!! | GAATTATAAATATTTTTAAT+CGG | - | chr8.3:29217269-29217288 | MS.gene27239:intron | 5.0% |
| AACACCAGGAGATCAACCAC+TGG | - | chr8.3:29215378-29215397 | MS.gene27239:intron | 50.0% | |
| AACACCGCATCTTCTAAGCG+GGG | + | chr8.3:29213975-29213994 | None:intergenic | 50.0% | |
| ACAACTCAAATGGTGGCTGC+TGG | - | chr8.3:29213909-29213928 | MS.gene27239:CDS | 50.0% | |
| ACAGCACTTTCAGGGACTCA+GGG | - | chr8.3:29215104-29215123 | MS.gene27239:intron | 50.0% | |
| ACCACAACAAATGATGCCGC+AGG | - | chr8.3:29214600-29214619 | MS.gene27239:CDS | 50.0% | |
| ATCCTTGAACGATCCAACGG+TGG | + | chr8.3:29213135-29213154 | None:intergenic | 50.0% | |
| CAACTCAAATGGTGGCTGCT+GGG | - | chr8.3:29213910-29213929 | MS.gene27239:CDS | 50.0% | |
| CAGGGTTCCTTGTAGCTTCA+AGG | + | chr8.3:29214944-29214963 | None:intergenic | 50.0% | |
| CCATGAGCTCTTGCATCTGT+GGG | + | chr8.3:29214866-29214885 | None:intergenic | 50.0% | |
| CCTAATCCTTGGTCCTCTAC+AGG | - | chr8.3:29215215-29215234 | MS.gene27239:intron | 50.0% | |
| CCTGTAGAGGACCAAGGATT+AGG | + | chr8.3:29215218-29215237 | None:intergenic | 50.0% | |
| CGCTTAGAAGATGCGGTGTT+AGG | - | chr8.3:29213975-29213994 | MS.gene27239:intron | 50.0% | |
| CTCAGCATGTTGAATCCCTC+AGG | + | chr8.3:29215026-29215045 | None:intergenic | 50.0% | |
| CTGAGGGATTCAACATGCTG+AGG | - | chr8.3:29215024-29215043 | MS.gene27239:intron | 50.0% | |
| CTGTCTACCTGCATTGTCTC+AGG | + | chr8.3:29215770-29215789 | None:intergenic | 50.0% | |
| GAGCTCCCCAAAATAACACC+AGG | - | chr8.3:29215364-29215383 | MS.gene27239:intron | 50.0% | |
| GAGGACCAAGGATTAGGAAG+TGG | + | chr8.3:29215212-29215231 | None:intergenic | 50.0% | |
| GCATCTTGTTGCAGGGAATC+GGG | - | chr8.3:29217077-29217096 | MS.gene27239:CDS | 50.0% | |
| GCCGGTAATACAGCACTTTC+AGG | - | chr8.3:29215095-29215114 | MS.gene27239:intron | 50.0% | |
| GGCAGATCATGCTGTGCATT+TGG | - | chr8.3:29214521-29214540 | MS.gene27239:intron | 50.0% | |
| GGCATCTTGTTGCAGGGAAT+CGG | - | chr8.3:29217076-29217095 | MS.gene27239:CDS | 50.0% | |
| GGTAAGAATCCGGTTCCAAG+AGG | + | chr8.3:29216841-29216860 | None:intergenic | 50.0% | |
| GTGGCATACAATTGCTCTGG+TGG | + | chr8.3:29218548-29218567 | None:intergenic | 50.0% | |
| GTGTTGGATGTGGGATGTGA+AGG | - | chr8.3:29214099-29214118 | MS.gene27239:intron | 50.0% | |
| GTTTCTCTCGATTCCACCGT+TGG | - | chr8.3:29213119-29213138 | MS.gene27239:CDS | 50.0% | |
| TACAGCACTTTCAGGGACTC+AGG | - | chr8.3:29215103-29215122 | MS.gene27239:intron | 50.0% | |
| TCCATGAGCTCTTGCATCTG+TGG | + | chr8.3:29214867-29214886 | None:intergenic | 50.0% | |
| TCCTTGTAGCTTCAAGGGTC+TGG | + | chr8.3:29214938-29214957 | None:intergenic | 50.0% | |
| TGAGATTCCGCACTATCTCG+GGG | + | chr8.3:29214833-29214852 | None:intergenic | 50.0% | |
| TGCATGAACATTCCCCGAAG+TGG | + | chr8.3:29218636-29218655 | None:intergenic | 50.0% | |
| TGGGTGGCATACAATTGCTC+TGG | + | chr8.3:29218551-29218570 | None:intergenic | 50.0% | |
| TTCCACCGTTGGATCGTTCA+AGG | - | chr8.3:29213130-29213149 | MS.gene27239:CDS | 50.0% | |
| TTGAAGCTGTGTAAGCTGGG+TGG | + | chr8.3:29218567-29218586 | None:intergenic | 50.0% | |
| TTGGGGAACACTGGTCAGTA+GGG | - | chr8.3:29218671-29218690 | MS.gene27239:CDS | 50.0% | |
| TTGTAGCTTCAAGGGTCTGG+CGG | + | chr8.3:29214935-29214954 | None:intergenic | 50.0% | |
| TTTGCACCTACCAATGCGAG+TGG | - | chr8.3:29214552-29214571 | MS.gene27239:intron | 50.0% | |
| TTTGGGGAACACTGGTCAGT+AGG | - | chr8.3:29218670-29218689 | MS.gene27239:CDS | 50.0% | |
| ! | AGGGCTCTTATTGCCACTTC+GGG | - | chr8.3:29218620-29218639 | MS.gene27239:CDS | 50.0% |
| ! | ATGAGACGTTGTTGTTGCGC+GGG | + | chr8.3:29213182-29213201 | None:intergenic | 50.0% |
| ! | CAGCCGTTGAACGTCTTTTG+GGG | - | chr8.3:29218654-29218673 | MS.gene27239:CDS | 50.0% |
| ! | GATGAGACGTTGTTGTTGCG+CGG | + | chr8.3:29213183-29213202 | None:intergenic | 50.0% |
| ! | GCAGCCGTTGAACGTCTTTT+GGG | - | chr8.3:29218653-29218672 | MS.gene27239:CDS | 50.0% |
| ! | TAGTTGATTGGTCCCTGGCT+AGG | + | chr8.3:29215133-29215152 | None:intergenic | 50.0% |
| ! | TGCAGCCGTTGAACGTCTTT+TGG | - | chr8.3:29218652-29218671 | MS.gene27239:CDS | 50.0% |
| ! | TTTCCTGGACTAGGTGCCAA+TGG | - | chr8.3:29214678-29214697 | MS.gene27239:intron | 50.0% |
| !! | AAGCACCTACTGGCTTAGGA+GGG | - | chr8.3:29215418-29215437 | MS.gene27239:intron | 50.0% |
| !! | GAACGTCTTTTGGGGAACAC+TGG | - | chr8.3:29218662-29218681 | MS.gene27239:CDS | 50.0% |
| !! | GGGATTAGTTGATTGGTCCC+TGG | + | chr8.3:29215138-29215157 | None:intergenic | 50.0% |
| !! | GGTATTGGTGCCACTACCAT+TGG | + | chr8.3:29214583-29214602 | None:intergenic | 50.0% |
| AATGCTGCTGGGGGTTTAGG+AGG | - | chr8.3:29214633-29214652 | MS.gene27239:intron | 55.0% | |
| ACCAGGAGATCAACCACTGG+TGG | - | chr8.3:29215381-29215400 | MS.gene27239:intron | 55.0% | |
| ACTAGGTGCCAATGGCACTG+GGG | - | chr8.3:29214686-29214705 | MS.gene27239:intron | 55.0% | |
| AGTCGCTCCACCAGTTTGAC+CGG | + | chr8.3:29217108-29217127 | None:intergenic | 55.0% | |
| ATGCTGCTGGGGGTTTAGGA+GGG | - | chr8.3:29214634-29214653 | MS.gene27239:intron | 55.0% | |
| ATTGGTCCCACCACTCGCAT+TGG | + | chr8.3:29214565-29214584 | None:intergenic | 55.0% | |
| CACCTACCAATGCGAGTGGT+GGG | - | chr8.3:29214556-29214575 | MS.gene27239:intron | 55.0% | |
| CAGGAGATCAACCACTGGTG+GGG | - | chr8.3:29215383-29215402 | MS.gene27239:intron | 55.0% | |
| CCAGGAGATCAACCACTGGT+GGG | - | chr8.3:29215382-29215401 | MS.gene27239:intron | 55.0% | |
| CCCACAGATGCAAGAGCTCA+TGG | - | chr8.3:29214863-29214882 | MS.gene27239:intron | 55.0% | |
| GACTAGGTGCCAATGGCACT+GGG | - | chr8.3:29214685-29214704 | MS.gene27239:intron | 55.0% | |
| GCCAGACCCTTGAAGCTACA+AGG | - | chr8.3:29214934-29214953 | MS.gene27239:intron | 55.0% | |
| GCTAATGCTGCTGGGGGTTT+AGG | - | chr8.3:29214630-29214649 | MS.gene27239:intron | 55.0% | |
| GGTCAAACCGGTCAAACTGG+TGG | - | chr8.3:29217098-29217117 | MS.gene27239:CDS | 55.0% | |
| GTTGCGAGCGGGAGAATACT+TGG | - | chr8.3:29213749-29213768 | MS.gene27239:intron | 55.0% | |
| TACCACCCAGCATGCCTTCA+AGG | + | chr8.3:29215458-29215477 | None:intergenic | 55.0% | |
| TCCAAGGCCACCAAACATGC+TGG | + | chr8.3:29217760-29217779 | None:intergenic | 55.0% | |
| TCGGGTCAAACCGGTCAAAC+TGG | - | chr8.3:29217095-29217114 | MS.gene27239:CDS | 55.0% | |
| TCTGCAGTTGCAGTTGCGAG+CGG | - | chr8.3:29213737-29213756 | MS.gene27239:intron | 55.0% | |
| TGCAGGGAATCGGGTCAAAC+CGG | - | chr8.3:29217086-29217105 | MS.gene27239:CDS | 55.0% | |
| ! | AATGCGAGTGGTGGGACCAA+TGG | - | chr8.3:29214564-29214583 | MS.gene27239:intron | 55.0% |
| ! | AGTGGTGGGACCAATGGTAG+TGG | - | chr8.3:29214570-29214589 | MS.gene27239:intron | 55.0% |
| ! | ATGTTTGGTGGCCTTGGAGC+TGG | - | chr8.3:29217762-29217781 | MS.gene27239:intron | 55.0% |
| ! | GCCTGCGGCATCATTTGTTG+TGG | + | chr8.3:29214604-29214623 | None:intergenic | 55.0% |
| ! | GCTATTTCCCCCAGTGCCAT+TGG | + | chr8.3:29214697-29214716 | None:intergenic | 55.0% |
| ! | GGGCTCTTATTGCCACTTCG+GGG | - | chr8.3:29218621-29218640 | MS.gene27239:CDS | 55.0% |
| ! | TCCAGCATGTTTGGTGGCCT+TGG | - | chr8.3:29217756-29217775 | MS.gene27239:intron | 55.0% |
| ! | TGAGACGTTGTTGTTGCGCG+GGG | + | chr8.3:29213181-29213200 | None:intergenic | 55.0% |
| !! | CAAGCACCTACTGGCTTAGG+AGG | - | chr8.3:29215417-29215436 | MS.gene27239:intron | 55.0% |
| !! | CAGCAAGCACCTACTGGCTT+AGG | - | chr8.3:29215414-29215433 | MS.gene27239:intron | 55.0% |
| !! | CTTGGTTTGCCTGGCCTTGA+AGG | - | chr8.3:29215441-29215460 | MS.gene27239:intron | 55.0% |
| !! | GCTGAGACAGAAGTGCTTGC+TGG | + | chr8.3:29216204-29216223 | None:intergenic | 55.0% |
| !! | GGTTTAGGAGGGCTCGGTTT+TGG | - | chr8.3:29214645-29214664 | MS.gene27239:intron | 55.0% |
| !! | TTAGGAGGGCTTGGTTTGCC+TGG | - | chr8.3:29215432-29215451 | MS.gene27239:intron | 55.0% |
| ACAAATGATGCCGCAGGCGC+TGG | - | chr8.3:29214606-29214625 | MS.gene27239:intron | 60.0% | |
| AGCATTAGCTCCAGCGCCTG+CGG | + | chr8.3:29214619-29214638 | None:intergenic | 60.0% | |
| CAACCACTGGTGGGGATGCT+AGG | - | chr8.3:29215391-29215410 | MS.gene27239:intron | 60.0% | |
| CCAAGCCCTCCTAAGCCAGT+AGG | + | chr8.3:29215426-29215445 | None:intergenic | 60.0% | |
| CCCACCAGTGGTTGATCTCC+TGG | + | chr8.3:29215385-29215404 | None:intergenic | 60.0% | |
| CGCTGGAGCTAATGCTGCTG+GGG | - | chr8.3:29214623-29214642 | MS.gene27239:intron | 60.0% | |
| CTGCAGTTGCAGTTGCGAGC+GGG | - | chr8.3:29213738-29213757 | MS.gene27239:intron | 60.0% | |
| GCACCTACCAATGCGAGTGG+TGG | - | chr8.3:29214555-29214574 | MS.gene27239:intron | 60.0% | |
| GCACTTTCAGGGACTCAGGG+TGG | - | chr8.3:29215107-29215126 | MS.gene27239:intron | 60.0% | |
| GCGCTGGAGCTAATGCTGCT+GGG | - | chr8.3:29214622-29214641 | MS.gene27239:intron | 60.0% | |
| GCTAGGCAGCAAGCACCTAC+TGG | - | chr8.3:29215408-29215427 | MS.gene27239:intron | 60.0% | |
| GCTGGAGCTAATGCTGCTGG+GGG | - | chr8.3:29214624-29214643 | MS.gene27239:intron | 60.0% | |
| GGACTAGGTGCCAATGGCAC+TGG | - | chr8.3:29214684-29214703 | MS.gene27239:intron | 60.0% | |
| GGTCAAACTGGTGGAGCGAC+TGG | - | chr8.3:29217107-29217126 | MS.gene27239:CDS | 60.0% | |
| TGAAGCTTGAGGGGACGGGA+TGG | - | chr8.3:29214217-29214236 | MS.gene27239:intron | 60.0% | |
| ! | AAGGGTCTGGCGGAGAGTAC+TGG | + | chr8.3:29214925-29214944 | None:intergenic | 60.0% |
| ! | CTAGGTGCCAATGGCACTGG+GGG | - | chr8.3:29214687-29214706 | MS.gene27239:intron | 60.0% |
| ! | GAAGGCATGCTGGGTGGTAG+TGG | - | chr8.3:29215459-29215478 | MS.gene27239:intron | 60.0% |
| ! | GTCCCACCACTCGCATTGGT+AGG | + | chr8.3:29214561-29214580 | None:intergenic | 60.0% |
| ! | GTGCCATTGGCACCTAGTCC+AGG | + | chr8.3:29214684-29214703 | None:intergenic | 60.0% |
| ! | TTTGGTGGCCTTGGAGCTGG+TGG | - | chr8.3:29217765-29217784 | MS.gene27239:intron | 60.0% |
| !! | AGGGTCTGGCGGAGAGTACT+GGG | + | chr8.3:29214924-29214943 | None:intergenic | 60.0% |
| !! | CCTACTGGCTTAGGAGGGCT+TGG | - | chr8.3:29215423-29215442 | MS.gene27239:intron | 60.0% |
| !! | CCTGGCCTTGAAGGCATGCT+GGG | - | chr8.3:29215450-29215469 | MS.gene27239:intron | 60.0% |
| CCCAGCATGCCTTCAAGGCC+AGG | + | chr8.3:29215453-29215472 | None:intergenic | 65.0% | |
| CTCCAAGGCCACCAGCTCCA+AGG | + | chr8.3:29217776-29217795 | None:intergenic | 65.0% | |
| CTGCCTAGCATCCCCACCAG+TGG | + | chr8.3:29215397-29215416 | None:intergenic | 65.0% | |
| GACTCAGGGTGGCCTAGCCA+GGG | - | chr8.3:29215118-29215137 | MS.gene27239:intron | 65.0% | |
| GCTGGGGGTTTAGGAGGGCT+CGG | - | chr8.3:29214639-29214658 | MS.gene27239:intron | 65.0% | |
| ! | GGCCTTGAAGGCATGCTGGG+TGG | - | chr8.3:29215453-29215472 | MS.gene27239:intron | 65.0% |
| ! | GGCGCTGGAGCTAATGCTGC+TGG | - | chr8.3:29214621-29214640 | MS.gene27239:intron | 65.0% |
| !! | GCCTGGCCTTGAAGGCATGC+TGG | - | chr8.3:29215449-29215468 | MS.gene27239:intron | 65.0% |
| GGACTCAGGGTGGCCTAGCC+AGG | - | chr8.3:29215117-29215136 | MS.gene27239:intron | 70.0% | |
| GGCCTTGGAGCTGGTGGCCT+TGG | - | chr8.3:29217771-29217790 | MS.gene27239:intron | 70.0% | |
| !! | GGGAGGTGACGGTGCCGTTG+AGG | - | chr8.3:29213022-29213041 | MS.gene27239:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 29213020 | 29218691 | 29213020 | ID=MS.gene27239 |
| chr8.3 | mRNA | 29213020 | 29218691 | 29213020 | ID=MS.gene27239.t1;Parent=MS.gene27239 |
| chr8.3 | exon | 29218463 | 29218691 | 29218463 | ID=MS.gene27239.t1.exon1;Parent=MS.gene27239.t1 |
| chr8.3 | CDS | 29218463 | 29218691 | 29218463 | ID=cds.MS.gene27239.t1;Parent=MS.gene27239.t1 |
| chr8.3 | exon | 29216475 | 29217197 | 29216475 | ID=MS.gene27239.t1.exon2;Parent=MS.gene27239.t1 |
| chr8.3 | CDS | 29216475 | 29217197 | 29216475 | ID=cds.MS.gene27239.t1;Parent=MS.gene27239.t1 |
| chr8.3 | exon | 29216133 | 29216350 | 29216133 | ID=MS.gene27239.t1.exon3;Parent=MS.gene27239.t1 |
| chr8.3 | CDS | 29216133 | 29216350 | 29216133 | ID=cds.MS.gene27239.t1;Parent=MS.gene27239.t1 |
| chr8.3 | exon | 29215930 | 29216046 | 29215930 | ID=MS.gene27239.t1.exon4;Parent=MS.gene27239.t1 |
| chr8.3 | CDS | 29215930 | 29216046 | 29215930 | ID=cds.MS.gene27239.t1;Parent=MS.gene27239.t1 |
| chr8.3 | exon | 29215475 | 29215524 | 29215475 | ID=MS.gene27239.t1.exon5;Parent=MS.gene27239.t1 |
| chr8.3 | CDS | 29215475 | 29215524 | 29215475 | ID=cds.MS.gene27239.t1;Parent=MS.gene27239.t1 |
| chr8.3 | exon | 29214583 | 29214620 | 29214583 | ID=MS.gene27239.t1.exon6;Parent=MS.gene27239.t1 |
| chr8.3 | CDS | 29214583 | 29214620 | 29214583 | ID=cds.MS.gene27239.t1;Parent=MS.gene27239.t1 |
| chr8.3 | exon | 29213895 | 29213987 | 29213895 | ID=MS.gene27239.t1.exon7;Parent=MS.gene27239.t1 |
| chr8.3 | CDS | 29213895 | 29213987 | 29213895 | ID=cds.MS.gene27239.t1;Parent=MS.gene27239.t1 |
| chr8.3 | exon | 29213020 | 29213168 | 29213020 | ID=MS.gene27239.t1.exon8;Parent=MS.gene27239.t1 |
| chr8.3 | CDS | 29213020 | 29213168 | 29213020 | ID=cds.MS.gene27239.t1;Parent=MS.gene27239.t1 |
| Gene Sequence |
| Protein sequence |
