Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28123.t1 | XP_003630093.1 | 98.6 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 1.40E-197 | 698.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28123.t1 | Q39237 | 59.7 | 365 | 136 | 4 | 4 | 357 | 3 | 367 | 7.3e-115 | 415.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28123.t1 | G7LB89 | 98.6 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 9.8e-198 | 698.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene28123.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059698 | MS.gene28123 | 0.833482 | 5.20E-56 | -1.69E-46 |
| MS.gene059700 | MS.gene28123 | 0.879177 | 1.54E-69 | -1.69E-46 |
| MS.gene059702 | MS.gene28123 | 0.870464 | 1.43E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28123.t1 | MTR_8g091650 | 98.603 | 358 | 5 | 0 | 1 | 358 | 1 | 358 | 0.0 | 738 |
| MS.gene28123.t1 | MTR_8g091650 | 89.594 | 394 | 5 | 1 | 1 | 358 | 1 | 394 | 0.0 | 700 |
| MS.gene28123.t1 | MTR_8g091650 | 98.239 | 284 | 5 | 0 | 75 | 358 | 2 | 285 | 0.0 | 580 |
| MS.gene28123.t1 | MTR_3g087940 | 68.785 | 362 | 105 | 4 | 4 | 358 | 3 | 363 | 0.0 | 511 |
| MS.gene28123.t1 | MTR_5g060950 | 47.977 | 346 | 173 | 4 | 15 | 353 | 1 | 346 | 3.87e-100 | 300 |
| MS.gene28123.t1 | MTR_3g073560 | 46.377 | 345 | 180 | 3 | 15 | 354 | 1 | 345 | 6.13e-99 | 305 |
| MS.gene28123.t1 | MTR_8g040120 | 51.689 | 296 | 129 | 4 | 70 | 356 | 176 | 466 | 1.47e-94 | 290 |
| MS.gene28123.t1 | MTR_7g089800 | 51.014 | 296 | 131 | 4 | 70 | 356 | 133 | 423 | 1.09e-93 | 286 |
| MS.gene28123.t1 | MTR_7g089800 | 51.014 | 296 | 131 | 4 | 70 | 356 | 162 | 452 | 2.06e-93 | 286 |
| MS.gene28123.t1 | MTR_2g086420 | 50.526 | 285 | 129 | 4 | 75 | 356 | 194 | 469 | 3.37e-90 | 279 |
| MS.gene28123.t1 | MTR_2g086420 | 50.526 | 285 | 129 | 4 | 75 | 356 | 193 | 468 | 3.62e-90 | 279 |
| MS.gene28123.t1 | MTR_7g092750 | 42.643 | 333 | 180 | 4 | 32 | 356 | 33 | 362 | 6.55e-88 | 269 |
| MS.gene28123.t1 | MTR_5g054900 | 48.797 | 291 | 137 | 3 | 74 | 356 | 67 | 353 | 1.20e-87 | 268 |
| MS.gene28123.t1 | MTR_5g054900 | 48.621 | 290 | 135 | 3 | 74 | 356 | 67 | 349 | 8.46e-87 | 266 |
| MS.gene28123.t1 | MTR_7g092750 | 45.098 | 306 | 160 | 3 | 59 | 356 | 158 | 463 | 8.49e-87 | 270 |
| MS.gene28123.t1 | MTR_5g054900 | 48.797 | 291 | 137 | 3 | 74 | 356 | 148 | 434 | 1.33e-86 | 268 |
| MS.gene28123.t1 | MTR_5g054900 | 48.621 | 290 | 135 | 3 | 74 | 356 | 178 | 460 | 1.32e-85 | 266 |
| MS.gene28123.t1 | MTR_4g053250 | 48.057 | 283 | 136 | 3 | 75 | 356 | 189 | 461 | 3.40e-84 | 264 |
| MS.gene28123.t1 | MTR_1g111310 | 44.828 | 290 | 151 | 4 | 74 | 356 | 420 | 707 | 4.07e-77 | 251 |
| MS.gene28123.t1 | MTR_1g111310 | 44.681 | 282 | 143 | 4 | 74 | 350 | 53 | 326 | 2.02e-68 | 228 |
| MS.gene28123.t1 | MTR_7g092750 | 41.176 | 306 | 146 | 4 | 59 | 356 | 158 | 437 | 1.28e-72 | 232 |
| MS.gene28123.t1 | MTR_0126s0080 | 38.720 | 328 | 166 | 8 | 3 | 309 | 146 | 459 | 7.12e-63 | 208 |
| MS.gene28123.t1 | MTR_3g044820 | 44.848 | 165 | 83 | 4 | 74 | 230 | 44 | 208 | 5.63e-40 | 140 |
| MS.gene28123.t1 | MTR_1g090370 | 33.796 | 216 | 117 | 6 | 129 | 338 | 22 | 217 | 5.63e-30 | 115 |
| MS.gene28123.t1 | MTR_8g094690 | 25.806 | 248 | 149 | 5 | 133 | 345 | 2 | 249 | 1.43e-13 | 70.5 |
| MS.gene28123.t1 | MTR_1g111320 | 55.172 | 58 | 25 | 1 | 75 | 131 | 146 | 203 | 5.70e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28123.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene28123.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene28123.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene28123.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene28123.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene28123.t1 | AT5G65210 | 60.109 | 366 | 133 | 5 | 4 | 357 | 3 | 367 | 9.84e-156 | 442 |
| MS.gene28123.t1 | AT5G10030 | 60.989 | 364 | 129 | 5 | 4 | 357 | 3 | 363 | 3.46e-155 | 441 |
| MS.gene28123.t1 | AT5G10030 | 60.989 | 364 | 129 | 5 | 4 | 357 | 3 | 363 | 3.46e-155 | 441 |
| MS.gene28123.t1 | AT5G10030 | 60.989 | 364 | 129 | 5 | 4 | 357 | 3 | 363 | 3.46e-155 | 441 |
| MS.gene28123.t1 | AT5G10030 | 60.989 | 364 | 129 | 5 | 4 | 357 | 3 | 363 | 3.46e-155 | 441 |
| MS.gene28123.t1 | AT5G10030 | 60.989 | 364 | 129 | 5 | 4 | 357 | 3 | 363 | 3.46e-155 | 441 |
| MS.gene28123.t1 | AT5G65210 | 66.316 | 285 | 95 | 1 | 74 | 357 | 13 | 297 | 3.70e-138 | 395 |
| MS.gene28123.t1 | AT1G77920 | 49.867 | 375 | 161 | 5 | 1 | 357 | 2 | 367 | 2.87e-124 | 362 |
| MS.gene28123.t1 | AT1G22070 | 51.093 | 366 | 157 | 5 | 13 | 356 | 17 | 382 | 1.63e-122 | 358 |
| MS.gene28123.t1 | AT5G06950 | 52.381 | 294 | 127 | 4 | 71 | 356 | 42 | 330 | 1.60e-93 | 282 |
| MS.gene28123.t1 | AT5G06950 | 52.381 | 294 | 127 | 4 | 71 | 356 | 42 | 330 | 1.60e-93 | 282 |
| MS.gene28123.t1 | AT5G06950 | 52.381 | 294 | 127 | 4 | 71 | 356 | 42 | 330 | 1.60e-93 | 282 |
| MS.gene28123.t1 | AT5G06950 | 52.381 | 294 | 127 | 4 | 71 | 356 | 42 | 330 | 1.60e-93 | 282 |
| MS.gene28123.t1 | AT5G06950 | 52.381 | 294 | 127 | 4 | 71 | 356 | 42 | 330 | 1.60e-93 | 282 |
| MS.gene28123.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 54 | 329 | 8.39e-93 | 281 |
| MS.gene28123.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 54 | 329 | 8.39e-93 | 281 |
| MS.gene28123.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 14 | 303 | 7.73e-92 | 277 |
| MS.gene28123.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 41 | 330 | 1.27e-91 | 278 |
| MS.gene28123.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 41 | 330 | 1.27e-91 | 278 |
| MS.gene28123.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 41 | 330 | 1.27e-91 | 278 |
| MS.gene28123.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 41 | 330 | 1.27e-91 | 278 |
| MS.gene28123.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 178 | 453 | 2.19e-91 | 282 |
| MS.gene28123.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 178 | 453 | 2.19e-91 | 282 |
| MS.gene28123.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 178 | 453 | 2.19e-91 | 282 |
| MS.gene28123.t1 | AT3G12250 | 51.525 | 295 | 130 | 4 | 70 | 356 | 35 | 324 | 2.47e-91 | 276 |
| MS.gene28123.t1 | AT3G12250 | 49.216 | 319 | 141 | 5 | 54 | 356 | 42 | 355 | 8.34e-91 | 276 |
| MS.gene28123.t1 | AT5G06960 | 50.865 | 289 | 131 | 3 | 75 | 356 | 26 | 310 | 2.25e-89 | 271 |
| MS.gene28123.t1 | AT5G06960 | 50.865 | 289 | 131 | 3 | 75 | 356 | 46 | 330 | 2.64e-89 | 271 |
| MS.gene28123.t1 | AT5G06960 | 50.865 | 289 | 131 | 3 | 75 | 356 | 46 | 330 | 2.64e-89 | 271 |
| MS.gene28123.t1 | AT5G06839 | 43.567 | 342 | 167 | 5 | 41 | 356 | 117 | 458 | 3.60e-85 | 265 |
| MS.gene28123.t1 | AT5G06839 | 45.779 | 308 | 151 | 4 | 65 | 356 | 108 | 415 | 5.20e-85 | 263 |
| MS.gene28123.t1 | AT5G06839 | 44.660 | 309 | 154 | 3 | 65 | 356 | 108 | 416 | 2.93e-83 | 259 |
| MS.gene28123.t1 | AT1G68640 | 43.182 | 308 | 166 | 3 | 56 | 356 | 147 | 452 | 1.29e-74 | 238 |
| MS.gene28123.t1 | AT1G58330 | 26.906 | 223 | 146 | 6 | 139 | 346 | 3 | 223 | 2.91e-14 | 71.6 |
Find 75 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATCAGTGATATACAAAT+TGG | 0.178312 | 4.4:-9950941 | MS.gene28123:CDS |
| TGATTATTTAACTTCATTTC+AGG | 0.206692 | 4.4:+9953023 | None:intergenic |
| GGATTGGATTCTAATAATTT+AGG | 0.214016 | 4.4:-9951926 | MS.gene28123:CDS |
| TAAGAGTCGTTTGAAGAAAA+AGG | 0.214551 | 4.4:-9952221 | MS.gene28123:intron |
| TCTGTCAATGGTTCAATTAA+AGG | 0.231131 | 4.4:+9950648 | None:intergenic |
| CCATACACCAATTTACTATA+TGG | 0.242264 | 4.4:-9953088 | MS.gene28123:CDS |
| TGCTCGATGGCTGCTTGCTT+TGG | 0.257053 | 4.4:-9950126 | MS.gene28123:CDS |
| GTTCTTCCCATATAGTAAAT+TGG | 0.257991 | 4.4:+9953081 | None:intergenic |
| TAGTAACTTTGTTAGCTTCT+TGG | 0.286447 | 4.4:+9952833 | None:intergenic |
| ATTCCAACATTTGTCTGTTT+AGG | 0.286691 | 4.4:+9950984 | None:intergenic |
| TAGTCAGAGGATGCTTCTTT+TGG | 0.297753 | 4.4:-9952886 | MS.gene28123:CDS |
| CAAATTGGGGAACTTGTAAA+TGG | 0.313309 | 4.4:-9950926 | MS.gene28123:CDS |
| TTTGTTTCCTCAAGAAATAT+TGG | 0.341373 | 4.4:-9953122 | MS.gene28123:CDS |
| TTTGCTGGCTCTGTAAATTC+AGG | 0.350309 | 4.4:-9951902 | MS.gene28123:intron |
| AGCTAACAAAGTTACTAATA+AGG | 0.353635 | 4.4:-9952827 | MS.gene28123:intron |
| TTTGACGTACGGTAAGTATT+CGG | 0.355095 | 4.4:+9950150 | None:intergenic |
| GCATGACTTCTCAAGATTAT+AGG | 0.355362 | 4.4:+9950608 | None:intergenic |
| AAATTGCAGGGATTGTATAT+TGG | 0.363352 | 4.4:-9951953 | MS.gene28123:intron |
| GTGTCGTTTAAAGCTGTTAC+AGG | 0.364560 | 4.4:-9952100 | MS.gene28123:CDS |
| GCTCGATGGCTGCTTGCTTT+GGG | 0.374474 | 4.4:-9950125 | MS.gene28123:CDS |
| CCATATAGTAAATTGGTGTA+TGG | 0.382687 | 4.4:+9953088 | None:intergenic |
| TGAAATGAAGTTAAATAATC+AGG | 0.391737 | 4.4:-9953021 | MS.gene28123:intron |
| TTGACGTACGGTAAGTATTC+GGG | 0.398169 | 4.4:+9950151 | None:intergenic |
| ATTGTATATTGGTGGTGGAT+TGG | 0.406379 | 4.4:-9951942 | MS.gene28123:CDS |
| AATAGAGAGGCTGGAAGCTC+TGG | 0.410741 | 4.4:-9950469 | MS.gene28123:CDS |
| AGGTGTTACCTTTAGAAGTT+CGG | 0.411150 | 4.4:+9950769 | None:intergenic |
| ATATCAGTGATATACAAATT+GGG | 0.413722 | 4.4:-9950940 | MS.gene28123:CDS |
| CTGTCAATGGTTCAATTAAA+GGG | 0.420015 | 4.4:+9950649 | None:intergenic |
| TCGACCCTCCGAACTTCTAA+AGG | 0.428847 | 4.4:-9950777 | MS.gene28123:intron |
| AACCGTTGTTCCTCTGTCAA+TGG | 0.441867 | 4.4:+9950636 | None:intergenic |
| TAAGGGATTTGAGCAAACTT+TGG | 0.444298 | 4.4:-9950085 | MS.gene28123:CDS |
| GTGAATACTTTCAACGCCTA+AGG | 0.464354 | 4.4:-9950103 | MS.gene28123:CDS |
| TAACTTTGTTAGCTTCTTGG+TGG | 0.469542 | 4.4:+9952836 | None:intergenic |
| CATACACCAATTTACTATAT+GGG | 0.478931 | 4.4:-9953087 | MS.gene28123:CDS |
| AGATGCCCTTTCACAAGGTA+TGG | 0.480625 | 4.4:-9950574 | MS.gene28123:CDS |
| AGAGCTAGATCATACAAAAC+AGG | 0.481991 | 4.4:-9952070 | MS.gene28123:intron |
| GGATATTGCAATAGAGAGGC+TGG | 0.484290 | 4.4:-9950478 | MS.gene28123:CDS |
| AAAGGGCATCTTCTGCTTGT+CGG | 0.484492 | 4.4:+9950586 | None:intergenic |
| TCTGGCTAGCTTTGTGAACC+AGG | 0.487895 | 4.4:-9950451 | MS.gene28123:intron |
| CAGGGATTGTATATTGGTGG+TGG | 0.489623 | 4.4:-9951947 | MS.gene28123:CDS |
| CTTGTTGACACAGTTGCAGC+AGG | 0.514923 | 4.4:-9950534 | MS.gene28123:CDS |
| CATATAGTAAATTGGTGTAT+GGG | 0.519743 | 4.4:+9953089 | None:intergenic |
| AAAGTTTGCTCAAATCCCTT+AGG | 0.521782 | 4.4:+9950087 | None:intergenic |
| AGACCTAAACAGACAAATGT+TGG | 0.522384 | 4.4:-9950987 | MS.gene28123:CDS |
| TGCAGGTTCACGAGGACGAT+TGG | 0.528063 | 4.4:+9950061 | None:intergenic |
| TGAATACTTTCAACGCCTAA+GGG | 0.549102 | 4.4:-9950102 | MS.gene28123:CDS |
| ATGTGGAAAACAACAGCTGA+AGG | 0.550259 | 4.4:-9950824 | MS.gene28123:CDS |
| ACAAATTGAGAAGATGATGA+AGG | 0.553463 | 4.4:+9953140 | None:intergenic |
| AGACAAATGTTGGAATTGAA+AGG | 0.555362 | 4.4:-9950977 | MS.gene28123:CDS |
| ACAGGCCGATCATCTTCGAC+AGG | 0.560852 | 4.4:-9950192 | MS.gene28123:intron |
| GAAGAACATTTCAAGAGTAA+TGG | 0.562707 | 4.4:-9953065 | MS.gene28123:CDS |
| GCAGCAGGACAACTCGTTGA+AGG | 0.566836 | 4.4:-9950519 | MS.gene28123:CDS |
| CTCTTGCATGAAGACTATGC+AGG | 0.569640 | 4.4:+9950044 | None:intergenic |
| AGGAACTTACATTCCACAGA+TGG | 0.575188 | 4.4:-9950499 | MS.gene28123:CDS |
| CCGTACGTCAAACTGCTCGA+TGG | 0.578154 | 4.4:-9950139 | MS.gene28123:CDS |
| CGTTTCCTGTCGAAGATGAT+CGG | 0.580416 | 4.4:+9950187 | None:intergenic |
| TATCAGTGATATACAAATTG+GGG | 0.581840 | 4.4:-9950939 | MS.gene28123:CDS |
| ATATACACCAATATTTCTTG+AGG | 0.587022 | 4.4:+9953115 | None:intergenic |
| TTGCAGGGATTGTATATTGG+TGG | 0.592067 | 4.4:-9951950 | MS.gene28123:intron |
| TAAGATGGAGTATGAACACT+GGG | 0.600728 | 4.4:-9951014 | MS.gene28123:CDS |
| TGTTACCTTTAGAAGTTCGG+AGG | 0.601165 | 4.4:+9950772 | None:intergenic |
| TTAAGATGGAGTATGAACAC+TGG | 0.603260 | 4.4:-9951015 | MS.gene28123:CDS |
| AACCATTGACAGAGGAACAA+CGG | 0.614266 | 4.4:-9950638 | MS.gene28123:CDS |
| GCAGAAGATGCCCTTTCACA+AGG | 0.620831 | 4.4:-9950579 | MS.gene28123:CDS |
| TTTAATTGAACCATTGACAG+AGG | 0.625048 | 4.4:-9950646 | MS.gene28123:CDS |
| TCTATGTTATCACTGGCATG+TGG | 0.630097 | 4.4:-9950841 | MS.gene28123:CDS |
| CCATCGAGCAGTTTGACGTA+CGG | 0.630335 | 4.4:+9950139 | None:intergenic |
| TCTATTGCAATATCCATCTG+TGG | 0.636700 | 4.4:+9950486 | None:intergenic |
| GTTACCTTTAGAAGTTCGGA+GGG | 0.640489 | 4.4:+9950773 | None:intergenic |
| GAAGACTATGCAGGTTCACG+AGG | 0.645466 | 4.4:+9950053 | None:intergenic |
| AGATGGATATTGCAATAGAG+AGG | 0.647680 | 4.4:-9950482 | MS.gene28123:CDS |
| TGTGGAAAACAACAGCTGAA+GGG | 0.647786 | 4.4:-9950823 | MS.gene28123:CDS |
| GTTTGAAATAGTGATTCATG+AGG | 0.660995 | 4.4:+9950903 | None:intergenic |
| ACGTCTCGCACAAAATCGAG+AGG | 0.680873 | 4.4:-9952251 | MS.gene28123:CDS |
| GATGGAGTATGAACACTGGG+TGG | 0.682481 | 4.4:-9951011 | MS.gene28123:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTATAAATTTAGTAAACT+TGG | + | chr4.4:9950216-9950235 | None:intergenic | 15.0% |
| !! | TTGACAATAATAAACTTAAT+TGG | + | chr4.4:9952992-9953011 | None:intergenic | 15.0% |
| !!! | TAAGTTTTTATAAAGCAAAA+AGG | + | chr4.4:9951548-9951567 | None:intergenic | 15.0% |
| !!! | TGATATATAATATTAGCTTT+GGG | - | chr4.4:9952072-9952091 | MS.gene28123:CDS | 15.0% |
| !!! | TTGATATATAATATTAGCTT+TGG | - | chr4.4:9952071-9952090 | MS.gene28123:CDS | 15.0% |
| !! | AATATATAACATACATTACC+TGG | + | chr4.4:9952774-9952793 | None:intergenic | 20.0% |
| !! | ACAAAAGCAACATTAATTAA+AGG | + | chr4.4:9951699-9951718 | None:intergenic | 20.0% |
| !! | AGTAACAAAATTTATTAGAG+AGG | - | chr4.4:9951838-9951857 | MS.gene28123:intron | 20.0% |
| !! | ATATCAGTGATATACAAATT+GGG | - | chr4.4:9952264-9952283 | MS.gene28123:intron | 20.0% |
| !! | CAAATTAAAAAGGTTAAACA+AGG | - | chr4.4:9952950-9952969 | MS.gene28123:intron | 20.0% |
| !! | CACAAATTACCAAATTAAAA+AGG | - | chr4.4:9952940-9952959 | MS.gene28123:intron | 20.0% |
| !! | CCTTTAACAAAATTTCAAAA+TGG | + | chr4.4:9950705-9950724 | None:intergenic | 20.0% |
| !! | GTAACAAAATTTATTAGAGA+GGG | - | chr4.4:9951839-9951858 | MS.gene28123:intron | 20.0% |
| !! | TAAGTTTATTATTGTCAAAC+AGG | - | chr4.4:9952994-9953013 | MS.gene28123:intron | 20.0% |
| !! | TGAAATGAAGTTAAATAATC+AGG | - | chr4.4:9950183-9950202 | MS.gene28123:CDS | 20.0% |
| !!! | AAACTTTGAGAAAATTCTTT+AGG | - | chr4.4:9951486-9951505 | MS.gene28123:intron | 20.0% |
| !!! | AGAAATAACAACTTTTAAGA+TGG | - | chr4.4:9952175-9952194 | MS.gene28123:intron | 20.0% |
| !!! | AGTTGTTATTTCTGTAAATT+AGG | + | chr4.4:9952168-9952187 | None:intergenic | 20.0% |
| !!! | CCATTTTGAAATTTTGTTAA+AGG | - | chr4.4:9950702-9950721 | MS.gene28123:intron | 20.0% |
| !!! | CTTGTTTAACCTTTTTAATT+TGG | + | chr4.4:9952952-9952971 | None:intergenic | 20.0% |
| !!! | GAAATTTTGGAAGAAATTAT+TGG | + | chr4.4:9951921-9951940 | None:intergenic | 20.0% |
| !!! | GTTTGTTTGTTATTAAATTC+TGG | - | chr4.4:9951324-9951343 | MS.gene28123:intron | 20.0% |
| !!! | TCTATTCTAAAACTAGTTTT+TGG | - | chr4.4:9952130-9952149 | MS.gene28123:intron | 20.0% |
| !!! | TGATTATTTAACTTCATTTC+AGG | + | chr4.4:9950184-9950203 | None:intergenic | 20.0% |
| ! | AAATCAAATGCTTGTTTGTT+TGG | + | chr4.4:9951044-9951063 | None:intergenic | 25.0% |
| ! | AACATTAATTAAAGGAAAGG+AGG | + | chr4.4:9951691-9951710 | None:intergenic | 25.0% |
| ! | ACATTAATTAAAGGAAAGGA+GGG | + | chr4.4:9951690-9951709 | None:intergenic | 25.0% |
| ! | AGCAACATTAATTAAAGGAA+AGG | + | chr4.4:9951694-9951713 | None:intergenic | 25.0% |
| ! | AGCTAACAAAGTTACTAATA+AGG | - | chr4.4:9950377-9950396 | MS.gene28123:intron | 25.0% |
| ! | ATATACACCAATATTTCTTG+AGG | + | chr4.4:9950092-9950111 | None:intergenic | 25.0% |
| ! | CAAAAAAGTGATTTCATCAT+AGG | + | chr4.4:9951392-9951411 | None:intergenic | 25.0% |
| ! | CATACACCAATTTACTATAT+GGG | - | chr4.4:9950117-9950136 | MS.gene28123:CDS | 25.0% |
| ! | CATATAGTAAATTGGTGTAT+GGG | + | chr4.4:9950118-9950137 | None:intergenic | 25.0% |
| ! | CATATCAGTGATATACAAAT+TGG | - | chr4.4:9952263-9952282 | MS.gene28123:intron | 25.0% |
| ! | CGTATAATTTAGATTAGATG+AGG | - | chr4.4:9952798-9952817 | MS.gene28123:intron | 25.0% |
| ! | GATATTGAACAATATGAAGT+AGG | + | chr4.4:9951188-9951207 | None:intergenic | 25.0% |
| ! | GGATTGGATTCTAATAATTT+AGG | - | chr4.4:9951278-9951297 | MS.gene28123:intron | 25.0% |
| ! | TATCAGTGATATACAAATTG+GGG | - | chr4.4:9952265-9952284 | MS.gene28123:intron | 25.0% |
| ! | TTTGTTTCCTCAAGAAATAT+TGG | - | chr4.4:9950082-9950101 | MS.gene28123:CDS | 25.0% |
| !! | CTTACTGCAGATATATATTT+TGG | - | chr4.4:9951564-9951583 | MS.gene28123:intron | 25.0% |
| !! | TCAATCACATTAATCCATTT+TGG | - | chr4.4:9950626-9950645 | MS.gene28123:CDS | 25.0% |
| !! | TTTGGTAATTTGTGTGTTAA+TGG | + | chr4.4:9952934-9952953 | None:intergenic | 25.0% |
| !!! | TCTAATAATTTAGGTTTTGC+TGG | - | chr4.4:9951287-9951306 | MS.gene28123:intron | 25.0% |
| !!! | TGCGTTTTTTTATGCTTATA+AGG | - | chr4.4:9950907-9950926 | MS.gene28123:CDS | 25.0% |
| !!! | TGTATGGACTATTTTTTACA+CGG | - | chr4.4:9950547-9950566 | MS.gene28123:CDS | 25.0% |
| AAATTGCAGGGATTGTATAT+TGG | - | chr4.4:9951251-9951270 | MS.gene28123:intron | 30.0% | |
| AACCTACAAAATCAACTACA+AGG | - | chr4.4:9951455-9951474 | MS.gene28123:intron | 30.0% | |
| ACAAATTGAGAAGATGATGA+AGG | + | chr4.4:9950067-9950086 | None:intergenic | 30.0% | |
| ACCTACAAAATCAACTACAA+GGG | - | chr4.4:9951456-9951475 | MS.gene28123:intron | 30.0% | |
| AGACAAATGTTGGAATTGAA+AGG | - | chr4.4:9952227-9952246 | MS.gene28123:CDS | 30.0% | |
| ATCGATATACTTGATCAACA+TGG | - | chr4.4:9952459-9952478 | MS.gene28123:intron | 30.0% | |
| ATTCCAACATTTGTCTGTTT+AGG | + | chr4.4:9952223-9952242 | None:intergenic | 30.0% | |
| ATTGCTCAATCAGTATTTCA+TGG | - | chr4.4:9950731-9950750 | MS.gene28123:intron | 30.0% | |
| CCATACACCAATTTACTATA+TGG | - | chr4.4:9950116-9950135 | MS.gene28123:CDS | 30.0% | |
| CCATATAGTAAATTGGTGTA+TGG | + | chr4.4:9950119-9950138 | None:intergenic | 30.0% | |
| CTAAGTTTCTACAAAGTTTG+AGG | + | chr4.4:9950792-9950811 | None:intergenic | 30.0% | |
| CTGTCAATGGTTCAATTAAA+GGG | + | chr4.4:9952558-9952577 | None:intergenic | 30.0% | |
| GAAGAACATTTCAAGAGTAA+TGG | - | chr4.4:9950139-9950158 | MS.gene28123:CDS | 30.0% | |
| GAATAGAGTTCAATACAAGA+AGG | + | chr4.4:9952117-9952136 | None:intergenic | 30.0% | |
| GTTCTTCCCATATAGTAAAT+TGG | + | chr4.4:9950126-9950145 | None:intergenic | 30.0% | |
| TAAGAGTCGTTTGAAGAAAA+AGG | - | chr4.4:9950983-9951002 | MS.gene28123:CDS | 30.0% | |
| TCCATACATGTTTGATATGA+CGG | + | chr4.4:9950535-9950554 | None:intergenic | 30.0% | |
| TCGATATACTTGATCAACAT+GGG | - | chr4.4:9952460-9952479 | MS.gene28123:intron | 30.0% | |
| TCTGTCAATGGTTCAATTAA+AGG | + | chr4.4:9952559-9952578 | None:intergenic | 30.0% | |
| TGGATTCAGAGTTTCAAAAT+TGG | + | chr4.4:9951901-9951920 | None:intergenic | 30.0% | |
| TTAATGCAGAGAGAAATGTT+TGG | - | chr4.4:9951803-9951822 | MS.gene28123:intron | 30.0% | |
| TTTAATTGAACCATTGACAG+AGG | - | chr4.4:9952558-9952577 | MS.gene28123:intron | 30.0% | |
| ! | AGAGAGAAATGTTTGGAATA+AGG | - | chr4.4:9951810-9951829 | MS.gene28123:intron | 30.0% |
| ! | GATGTTTTCTATGTTATCAC+TGG | - | chr4.4:9952356-9952375 | MS.gene28123:intron | 30.0% |
| ! | GTTGATCAAGTATATCGATT+AGG | + | chr4.4:9952458-9952477 | None:intergenic | 30.0% |
| ! | GTTTGAAATAGTGATTCATG+AGG | + | chr4.4:9952304-9952323 | None:intergenic | 30.0% |
| ! | TAGTAACTTTGTTAGCTTCT+TGG | + | chr4.4:9950374-9950393 | None:intergenic | 30.0% |
| ! | TGGGTTGAACAAAATTAATG+TGG | + | chr4.4:9950512-9950531 | None:intergenic | 30.0% |
| ! | TTCCAAAATTTCAAGTAAGC+TGG | - | chr4.4:9951929-9951948 | MS.gene28123:CDS | 30.0% |
| ! | TTTTTCCATACCTTGTGAAA+GGG | + | chr4.4:9952638-9952657 | None:intergenic | 30.0% |
| !! | ACTGCAGATATATATTTTGG+TGG | - | chr4.4:9951567-9951586 | MS.gene28123:intron | 30.0% |
| !! | AGTTTTATCAGAAGTATGCA+TGG | - | chr4.4:9952896-9952915 | MS.gene28123:intron | 30.0% |
| !!! | AGCATTTTAGAACCACATTT+TGG | - | chr4.4:9950825-9950844 | MS.gene28123:CDS | 30.0% |
| !!! | GATGCTTCTTTTGGAATATT+GGG | - | chr4.4:9950327-9950346 | MS.gene28123:intron | 30.0% |
| !!! | GTATGGACTATTTTTTACAC+GGG | - | chr4.4:9950548-9950567 | MS.gene28123:CDS | 30.0% |
| !!! | TATGGACTATTTTTTACACG+GGG | - | chr4.4:9950549-9950568 | MS.gene28123:CDS | 30.0% |
| AAAAGGACATGCATGCAAAA+AGG | + | chr4.4:9951531-9951550 | None:intergenic | 35.0% | |
| AAAAGTCGACCAATCTGAAA+GGG | - | chr4.4:9950649-9950668 | MS.gene28123:CDS | 35.0% | |
| ACAAGGTATGGAAAAACTAC+AGG | - | chr4.4:9952642-9952661 | MS.gene28123:intron | 35.0% | |
| ACATCCAAAATTTGGAAGCA+GGG | + | chr4.4:9950881-9950900 | None:intergenic | 35.0% | |
| ACCGTCATATCAAACATGTA+TGG | - | chr4.4:9950531-9950550 | MS.gene28123:CDS | 35.0% | |
| AGACCTAAACAGACAAATGT+TGG | - | chr4.4:9952217-9952236 | MS.gene28123:intron | 35.0% | |
| AGAGCTAGATCATACAAAAC+AGG | - | chr4.4:9951134-9951153 | MS.gene28123:intron | 35.0% | |
| AGATGGATATTGCAATAGAG+AGG | - | chr4.4:9952722-9952741 | MS.gene28123:intron | 35.0% | |
| AGTGAGGTCATTGCTAAAAT+AGG | + | chr4.4:9951652-9951671 | None:intergenic | 35.0% | |
| ATACATGTTTGATATGACGG+TGG | + | chr4.4:9950532-9950551 | None:intergenic | 35.0% | |
| ATGTTTGTGATGAGATTTGC+AGG | - | chr4.4:9952525-9952544 | MS.gene28123:intron | 35.0% | |
| CAAATTGGGGAACTTGTAAA+TGG | - | chr4.4:9952278-9952297 | MS.gene28123:intron | 35.0% | |
| CAAGAAGGAAAACATACTCA+AGG | + | chr4.4:9952102-9952121 | None:intergenic | 35.0% | |
| CAAGGTATGGAAAAACTACA+GGG | - | chr4.4:9952643-9952662 | MS.gene28123:intron | 35.0% | |
| CACAAACATACATTATGCCA+TGG | + | chr4.4:9952514-9952533 | None:intergenic | 35.0% | |
| CATCAAGAGATTGACAAATG+AGG | + | chr4.4:9951226-9951245 | None:intergenic | 35.0% | |
| CGATATACTTGATCAACATG+GGG | - | chr4.4:9952461-9952480 | MS.gene28123:intron | 35.0% | |
| CTTGATGCAACAAAATTGCA+GGG | - | chr4.4:9951239-9951258 | MS.gene28123:intron | 35.0% | |
| GATTTCTGACGTTTCATAAC+AGG | - | chr4.4:9951059-9951078 | MS.gene28123:intron | 35.0% | |
| GCATGACTTCTCAAGATTAT+AGG | + | chr4.4:9952599-9952618 | None:intergenic | 35.0% | |
| GTCGTTTGAAGAAAAAGGTT+TGG | - | chr4.4:9950988-9951007 | MS.gene28123:CDS | 35.0% | |
| TAAAACTTATACTCCTGCCA+TGG | + | chr4.4:9952883-9952902 | None:intergenic | 35.0% | |
| TAAGATGGAGTATGAACACT+GGG | - | chr4.4:9952190-9952209 | MS.gene28123:intron | 35.0% | |
| TAAGGGATTTGAGCAAACTT+TGG | - | chr4.4:9953119-9953138 | MS.gene28123:CDS | 35.0% | |
| TACATGTTTGATATGACGGT+GGG | + | chr4.4:9950531-9950550 | None:intergenic | 35.0% | |
| TCACACCAAAAAATTTCCAC+AGG | + | chr4.4:9951872-9951891 | None:intergenic | 35.0% | |
| TCTATTGCAATATCCATCTG+TGG | + | chr4.4:9952721-9952740 | None:intergenic | 35.0% | |
| TCTTGATGCAACAAAATTGC+AGG | - | chr4.4:9951238-9951257 | MS.gene28123:intron | 35.0% | |
| TGAATACTTTCAACGCCTAA+GGG | - | chr4.4:9953102-9953121 | MS.gene28123:CDS | 35.0% | |
| TGCTAAATACCTATAGTCAG+AGG | - | chr4.4:9950305-9950324 | MS.gene28123:intron | 35.0% | |
| TGTCACTGCTCTTATAAATG+TGG | - | chr4.4:9951362-9951381 | MS.gene28123:intron | 35.0% | |
| TTAAGATGGAGTATGAACAC+TGG | - | chr4.4:9952189-9952208 | MS.gene28123:intron | 35.0% | |
| TTAGACACTACATTCTGTTC+TGG | - | chr4.4:9952048-9952067 | MS.gene28123:intron | 35.0% | |
| TTAGATGAGGTTATGAGTAG+TGG | - | chr4.4:9952811-9952830 | MS.gene28123:intron | 35.0% | |
| TTGAACTTAACAGTGCACAT+GGG | + | chr4.4:9950576-9950595 | None:intergenic | 35.0% | |
| TTGAGGCATAAGGAAAGAAT+GGG | + | chr4.4:9950775-9950794 | None:intergenic | 35.0% | |
| TTTGACGTACGGTAAGTATT+CGG | + | chr4.4:9953057-9953076 | None:intergenic | 35.0% | |
| ! | AAAGTTTGCTCAAATCCCTT+AGG | + | chr4.4:9953120-9953139 | None:intergenic | 35.0% |
| ! | AGCCAGCTTACTTGAAATTT+TGG | + | chr4.4:9951934-9951953 | None:intergenic | 35.0% |
| ! | AGGTGTTACCTTTAGAAGTT+CGG | + | chr4.4:9952438-9952457 | None:intergenic | 35.0% |
| ! | GTTTTTCCATACCTTGTGAA+AGG | + | chr4.4:9952639-9952658 | None:intergenic | 35.0% |
| ! | TAACTTTGTTAGCTTCTTGG+TGG | + | chr4.4:9950371-9950390 | None:intergenic | 35.0% |
| ! | TCTACAAAGTTTGAGGCATA+AGG | + | chr4.4:9950785-9950804 | None:intergenic | 35.0% |
| ! | TTGTCGCTTCAACATAATCA+AGG | - | chr4.4:9950484-9950503 | MS.gene28123:CDS | 35.0% |
| ! | TTTGAGGCATAAGGAAAGAA+TGG | + | chr4.4:9950776-9950795 | None:intergenic | 35.0% |
| !! | ATTGGTCGACTTTTCCAAAA+TGG | + | chr4.4:9950643-9950662 | None:intergenic | 35.0% |
| !! | ATTGTATATTGGTGGTGGAT+TGG | - | chr4.4:9951262-9951281 | MS.gene28123:intron | 35.0% |
| !! | TCCCTTGTAGTTGATTTTGT+AGG | + | chr4.4:9951460-9951479 | None:intergenic | 35.0% |
| !!! | CTACTCCTGTGGAAATTTTT+TGG | - | chr4.4:9951864-9951883 | MS.gene28123:intron | 35.0% |
| !!! | GCAGATATATATTTTGGTGG+TGG | - | chr4.4:9951570-9951589 | MS.gene28123:intron | 35.0% |
| !!! | GGATGCTTCTTTTGGAATAT+TGG | - | chr4.4:9950326-9950345 | MS.gene28123:intron | 35.0% |
| AACCATTGACAGAGGAACAA+CGG | - | chr4.4:9952566-9952585 | MS.gene28123:intron | 40.0% | |
| AATAGGATTTGAGTAGCTGC+TGG | + | chr4.4:9951635-9951654 | None:intergenic | 40.0% | |
| AGGAACTTACATTCCACAGA+TGG | - | chr4.4:9952705-9952724 | MS.gene28123:intron | 40.0% | |
| ATGTGGAAAACAACAGCTGA+AGG | - | chr4.4:9952380-9952399 | MS.gene28123:intron | 40.0% | |
| CAAGCCAGACATCCAAAATT+TGG | + | chr4.4:9950889-9950908 | None:intergenic | 40.0% | |
| CATCCAAAATTTGGAAGCAG+GGG | + | chr4.4:9950880-9950899 | None:intergenic | 40.0% | |
| GAAAAGTCGACCAATCTGAA+AGG | - | chr4.4:9950648-9950667 | MS.gene28123:CDS | 40.0% | |
| GACATCCAAAATTTGGAAGC+AGG | + | chr4.4:9950882-9950901 | None:intergenic | 40.0% | |
| GAGTATCTGAATGTACAGTG+AGG | + | chr4.4:9951668-9951687 | None:intergenic | 40.0% | |
| GTGAATACTTTCAACGCCTA+AGG | - | chr4.4:9953101-9953120 | MS.gene28123:CDS | 40.0% | |
| GTTGAACTTAACAGTGCACA+TGG | + | chr4.4:9950577-9950596 | None:intergenic | 40.0% | |
| TATGTTGAAGCGACAAAGTG+TGG | + | chr4.4:9950480-9950499 | None:intergenic | 40.0% | |
| TCTATGTTATCACTGGCATG+TGG | - | chr4.4:9952363-9952382 | MS.gene28123:intron | 40.0% | |
| TGCAAAGTGAGTCCAAAATG+TGG | + | chr4.4:9950840-9950859 | None:intergenic | 40.0% | |
| TGGAAAACAATGCTGATCCA+TGG | - | chr4.4:9952863-9952882 | MS.gene28123:CDS | 40.0% | |
| TGTGGAAAACAACAGCTGAA+GGG | - | chr4.4:9952381-9952400 | MS.gene28123:intron | 40.0% | |
| TTGACGTACGGTAAGTATTC+GGG | + | chr4.4:9953056-9953075 | None:intergenic | 40.0% | |
| TTGCAGGGATTGTATATTGG+TGG | - | chr4.4:9951254-9951273 | MS.gene28123:intron | 40.0% | |
| ! | CTGCTGTCATATTTCTACCA+TGG | - | chr4.4:9952494-9952513 | MS.gene28123:intron | 40.0% |
| ! | GAAGGGTTTTTCTTGTGGAT+TGG | - | chr4.4:9952398-9952417 | MS.gene28123:intron | 40.0% |
| ! | GCTTCCAAATTTTGGATGTC+TGG | - | chr4.4:9950882-9950901 | MS.gene28123:CDS | 40.0% |
| ! | GTTACCTTTAGAAGTTCGGA+GGG | + | chr4.4:9952434-9952453 | None:intergenic | 40.0% |
| ! | TAGTCAGAGGATGCTTCTTT+TGG | - | chr4.4:9950318-9950337 | MS.gene28123:intron | 40.0% |
| ! | TGTTACCTTTAGAAGTTCGG+AGG | + | chr4.4:9952435-9952454 | None:intergenic | 40.0% |
| ! | TTGCTACTTGCTTGATATCG+CGG | - | chr4.4:9950410-9950429 | MS.gene28123:intron | 40.0% |
| !! | AAGAAGCATCCTCTGACTAT+AGG | + | chr4.4:9950317-9950336 | None:intergenic | 40.0% |
| !! | GTGTCGTTTAAAGCTGTTAC+AGG | - | chr4.4:9951104-9951123 | MS.gene28123:intron | 40.0% |
| !! | TTTGCTGGCTCTGTAAATTC+AGG | - | chr4.4:9951302-9951321 | MS.gene28123:intron | 40.0% |
| AAACAATGCTGATCCATGGC+AGG | - | chr4.4:9952867-9952886 | MS.gene28123:CDS | 45.0% | |
| AACCGTTGTTCCTCTGTCAA+TGG | + | chr4.4:9952571-9952590 | None:intergenic | 45.0% | |
| ACTTTGCACTGCAGATTAGG+AGG | - | chr4.4:9950852-9950871 | MS.gene28123:CDS | 45.0% | |
| AGATGCCCTTTCACAAGGTA+TGG | - | chr4.4:9952630-9952649 | MS.gene28123:intron | 45.0% | |
| AGGCCAATAAGCCCTAGTTT+AGG | + | chr4.4:9951597-9951616 | None:intergenic | 45.0% | |
| CAGGGATTGTATATTGGTGG+TGG | - | chr4.4:9951257-9951276 | MS.gene28123:intron | 45.0% | |
| CGTTTCCTGTCGAAGATGAT+CGG | + | chr4.4:9953020-9953039 | None:intergenic | 45.0% | |
| CTCACTTTGCACTGCAGATT+AGG | - | chr4.4:9950849-9950868 | MS.gene28123:CDS | 45.0% | |
| CTTTGCACTGCAGATTAGGA+GGG | - | chr4.4:9950853-9950872 | MS.gene28123:CDS | 45.0% | |
| GACACAACGGTTATGAGTAG+TGG | - | chr4.4:9952843-9952862 | MS.gene28123:CDS | 45.0% | |
| GCTGGCTATTATGTACCTAG+TGG | - | chr4.4:9951947-9951966 | MS.gene28123:CDS | 45.0% | |
| GGACCTAAACTAGGGCTTAT+TGG | - | chr4.4:9951591-9951610 | MS.gene28123:intron | 45.0% | |
| GGATATTGCAATAGAGAGGC+TGG | - | chr4.4:9952726-9952745 | MS.gene28123:intron | 45.0% | |
| GTGATGAGATTTGCAGGTTC+TGG | - | chr4.4:9952531-9952550 | MS.gene28123:intron | 45.0% | |
| GTGGAAAACGTGTGACACAA+CGG | - | chr4.4:9952830-9952849 | MS.gene28123:CDS | 45.0% | |
| ! | CAGCTGAAGGGTTTTTCTTG+TGG | - | chr4.4:9952393-9952412 | MS.gene28123:intron | 45.0% |
| !! | AAAGGGCATCTTCTGCTTGT+CGG | + | chr4.4:9952621-9952640 | None:intergenic | 45.0% |
| !! | TTGGTGGTGGACCTAAACTA+GGG | - | chr4.4:9951583-9951602 | MS.gene28123:intron | 45.0% |
| !! | TTTGGTGGTGGACCTAAACT+AGG | - | chr4.4:9951582-9951601 | MS.gene28123:intron | 45.0% |
| !!! | GGGTTTTTCTTGTGGATTGG+AGG | - | chr4.4:9952401-9952420 | MS.gene28123:intron | 45.0% |
| AATAGAGAGGCTGGAAGCTC+TGG | - | chr4.4:9952735-9952754 | MS.gene28123:intron | 50.0% | |
| ACGTCTCGCACAAAATCGAG+AGG | - | chr4.4:9950953-9950972 | MS.gene28123:CDS | 50.0% | |
| CCATCGAGCAGTTTGACGTA+CGG | + | chr4.4:9953068-9953087 | None:intergenic | 50.0% | |
| CTTGTTGACACAGTTGCAGC+AGG | - | chr4.4:9952670-9952689 | MS.gene28123:intron | 50.0% | |
| GATGGAGTATGAACACTGGG+TGG | - | chr4.4:9952193-9952212 | MS.gene28123:intron | 50.0% | |
| GATTTGAGTAGCTGCTGGTC+TGG | + | chr4.4:9951630-9951649 | None:intergenic | 50.0% | |
| GCAGAAGATGCCCTTTCACA+AGG | - | chr4.4:9952625-9952644 | MS.gene28123:intron | 50.0% | |
| TCGACCCTCCGAACTTCTAA+AGG | - | chr4.4:9952427-9952446 | MS.gene28123:intron | 50.0% | |
| TCGCATCAGCCCTTTCAGAT+TGG | + | chr4.4:9950661-9950680 | None:intergenic | 50.0% | |
| TTGTACACAGTGCTGCCACT+AGG | + | chr4.4:9951965-9951984 | None:intergenic | 50.0% | |
| ! | GGCTTATTGGCCTCACCATT+GGG | - | chr4.4:9951604-9951623 | MS.gene28123:intron | 50.0% |
| ! | GGTCCCCTGCTTCCAAATTT+TGG | - | chr4.4:9950874-9950893 | MS.gene28123:CDS | 50.0% |
| !! | TAGAGAGGGTACTACTCCTG+TGG | - | chr4.4:9951853-9951872 | MS.gene28123:intron | 50.0% |
| !! | TCTGGCTAGCTTTGTGAACC+AGG | - | chr4.4:9952753-9952772 | MS.gene28123:intron | 50.0% |
| ACAGGCCGATCATCTTCGAC+AGG | - | chr4.4:9953012-9953031 | MS.gene28123:intron | 55.0% | |
| CCGTACGTCAAACTGCTCGA+TGG | - | chr4.4:9953065-9953084 | MS.gene28123:CDS | 55.0% | |
| GCAGCAGGACAACTCGTTGA+AGG | - | chr4.4:9952685-9952704 | MS.gene28123:intron | 55.0% | |
| GCTCGATGGCTGCTTGCTTT+GGG | - | chr4.4:9953079-9953098 | MS.gene28123:CDS | 55.0% | |
| TGCAGGTTCACGAGGACGAT+TGG | + | chr4.4:9953146-9953165 | None:intergenic | 55.0% | |
| TGCTCGATGGCTGCTTGCTT+TGG | - | chr4.4:9953078-9953097 | MS.gene28123:CDS | 55.0% | |
| ! | GGGCTTATTGGCCTCACCAT+TGG | - | chr4.4:9951603-9951622 | MS.gene28123:intron | 55.0% |
| ! | TAGCTGCTGGTCTGGCCCAA+TGG | + | chr4.4:9951622-9951641 | None:intergenic | 60.0% |
| ! | GCTGGTCTGGCCCAATGGTG+AGG | + | chr4.4:9951617-9951636 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 9950058 | 9953168 | 9950058 | ID=MS.gene28123 |
| chr4.4 | mRNA | 9950058 | 9953168 | 9950058 | ID=MS.gene28123.t1;Parent=MS.gene28123 |
| chr4.4 | exon | 9953022 | 9953168 | 9953022 | ID=MS.gene28123.t1.exon1;Parent=MS.gene28123.t1 |
| chr4.4 | CDS | 9953022 | 9953168 | 9953022 | ID=cds.MS.gene28123.t1;Parent=MS.gene28123.t1 |
| chr4.4 | exon | 9952828 | 9952905 | 9952828 | ID=MS.gene28123.t1.exon2;Parent=MS.gene28123.t1 |
| chr4.4 | CDS | 9952828 | 9952905 | 9952828 | ID=cds.MS.gene28123.t1;Parent=MS.gene28123.t1 |
| chr4.4 | exon | 9952222 | 9952281 | 9952222 | ID=MS.gene28123.t1.exon3;Parent=MS.gene28123.t1 |
| chr4.4 | CDS | 9952222 | 9952281 | 9952222 | ID=cds.MS.gene28123.t1;Parent=MS.gene28123.t1 |
| chr4.4 | exon | 9952071 | 9952145 | 9952071 | ID=MS.gene28123.t1.exon4;Parent=MS.gene28123.t1 |
| chr4.4 | CDS | 9952071 | 9952145 | 9952071 | ID=cds.MS.gene28123.t1;Parent=MS.gene28123.t1 |
| chr4.4 | exon | 9951903 | 9951966 | 9951903 | ID=MS.gene28123.t1.exon5;Parent=MS.gene28123.t1 |
| chr4.4 | CDS | 9951903 | 9951966 | 9951903 | ID=cds.MS.gene28123.t1;Parent=MS.gene28123.t1 |
| chr4.4 | exon | 9950778 | 9951049 | 9950778 | ID=MS.gene28123.t1.exon6;Parent=MS.gene28123.t1 |
| chr4.4 | CDS | 9950778 | 9951049 | 9950778 | ID=cds.MS.gene28123.t1;Parent=MS.gene28123.t1 |
| chr4.4 | exon | 9950452 | 9950679 | 9950452 | ID=MS.gene28123.t1.exon7;Parent=MS.gene28123.t1 |
| chr4.4 | CDS | 9950452 | 9950679 | 9950452 | ID=cds.MS.gene28123.t1;Parent=MS.gene28123.t1 |
| chr4.4 | exon | 9950058 | 9950210 | 9950058 | ID=MS.gene28123.t1.exon8;Parent=MS.gene28123.t1 |
| chr4.4 | CDS | 9950058 | 9950210 | 9950058 | ID=cds.MS.gene28123.t1;Parent=MS.gene28123.t1 |
| Gene Sequence |
| Protein sequence |
