Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059702.t1 | XP_003630093.1 | 98 | 358 | 7 | 0 | 1 | 358 | 1 | 358 | 3.40E-196 | 694.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059702.t1 | Q39237 | 60.1 | 366 | 133 | 4 | 4 | 357 | 3 | 367 | 2.5e-115 | 416.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059702.t1 | G7LB89 | 98.0 | 358 | 7 | 0 | 1 | 358 | 1 | 358 | 2.4e-196 | 694.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene059702.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059698 | MS.gene059702 | 0.922429 | 9.95E-89 | -1.69E-46 |
| MS.gene059700 | MS.gene059702 | 0.87007 | 1.93E-66 | -1.69E-46 |
| MS.gene059702 | MS.gene28123 | 0.870464 | 1.43E-66 | -1.69E-46 |
| MS.gene059702 | MS.gene56769 | 0.818824 | 1.60E-52 | -1.69E-46 |
| MS.gene059702 | MS.gene70341 | 0.896658 | 2.99E-76 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059702.t1 | MTR_8g091650 | 98.045 | 358 | 7 | 0 | 1 | 358 | 1 | 358 | 0.0 | 734 |
| MS.gene059702.t1 | MTR_8g091650 | 89.086 | 394 | 7 | 1 | 1 | 358 | 1 | 394 | 0.0 | 715 |
| MS.gene059702.t1 | MTR_8g091650 | 98.239 | 284 | 5 | 0 | 75 | 358 | 2 | 285 | 0.0 | 580 |
| MS.gene059702.t1 | MTR_3g087940 | 69.061 | 362 | 104 | 4 | 4 | 358 | 3 | 363 | 0.0 | 509 |
| MS.gene059702.t1 | MTR_5g060950 | 47.977 | 346 | 173 | 4 | 15 | 353 | 1 | 346 | 8.38e-100 | 299 |
| MS.gene059702.t1 | MTR_3g073560 | 46.377 | 345 | 180 | 3 | 15 | 354 | 1 | 345 | 1.18e-98 | 304 |
| MS.gene059702.t1 | MTR_8g040120 | 52.234 | 291 | 125 | 4 | 75 | 356 | 181 | 466 | 2.99e-94 | 289 |
| MS.gene059702.t1 | MTR_7g089800 | 51.546 | 291 | 127 | 4 | 75 | 356 | 138 | 423 | 3.28e-93 | 285 |
| MS.gene059702.t1 | MTR_7g089800 | 51.546 | 291 | 127 | 4 | 75 | 356 | 167 | 452 | 4.33e-93 | 285 |
| MS.gene059702.t1 | MTR_2g086420 | 50.526 | 285 | 129 | 4 | 75 | 356 | 193 | 468 | 2.28e-90 | 280 |
| MS.gene059702.t1 | MTR_2g086420 | 50.526 | 285 | 129 | 4 | 75 | 356 | 194 | 469 | 2.63e-90 | 280 |
| MS.gene059702.t1 | MTR_7g092750 | 42.943 | 333 | 179 | 4 | 32 | 356 | 33 | 362 | 6.60e-89 | 272 |
| MS.gene059702.t1 | MTR_7g092750 | 42.943 | 333 | 179 | 4 | 32 | 356 | 134 | 463 | 1.17e-87 | 272 |
| MS.gene059702.t1 | MTR_5g054900 | 48.797 | 291 | 137 | 3 | 74 | 356 | 67 | 353 | 1.24e-87 | 268 |
| MS.gene059702.t1 | MTR_5g054900 | 48.621 | 290 | 135 | 3 | 74 | 356 | 67 | 349 | 7.51e-87 | 266 |
| MS.gene059702.t1 | MTR_5g054900 | 48.797 | 291 | 137 | 3 | 74 | 356 | 148 | 434 | 9.01e-87 | 268 |
| MS.gene059702.t1 | MTR_5g054900 | 48.621 | 290 | 135 | 3 | 74 | 356 | 178 | 460 | 1.12e-85 | 266 |
| MS.gene059702.t1 | MTR_4g053250 | 47.735 | 287 | 139 | 3 | 71 | 356 | 185 | 461 | 9.69e-85 | 265 |
| MS.gene059702.t1 | MTR_1g111310 | 44.828 | 290 | 151 | 4 | 74 | 356 | 420 | 707 | 3.74e-77 | 251 |
| MS.gene059702.t1 | MTR_1g111310 | 44.681 | 282 | 143 | 4 | 74 | 350 | 53 | 326 | 1.66e-68 | 228 |
| MS.gene059702.t1 | MTR_7g092750 | 39.339 | 333 | 165 | 5 | 32 | 356 | 134 | 437 | 1.64e-73 | 234 |
| MS.gene059702.t1 | MTR_0126s0080 | 43.462 | 260 | 138 | 4 | 59 | 309 | 200 | 459 | 1.70e-63 | 209 |
| MS.gene059702.t1 | MTR_3g044820 | 44.848 | 165 | 83 | 4 | 74 | 230 | 44 | 208 | 4.46e-40 | 141 |
| MS.gene059702.t1 | MTR_1g090370 | 33.796 | 216 | 117 | 6 | 129 | 338 | 22 | 217 | 6.11e-30 | 114 |
| MS.gene059702.t1 | MTR_8g094690 | 25.806 | 248 | 149 | 5 | 133 | 345 | 2 | 249 | 1.68e-13 | 70.5 |
| MS.gene059702.t1 | MTR_1g111320 | 55.172 | 58 | 25 | 1 | 75 | 131 | 146 | 203 | 5.64e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059702.t1 | AT5G65210 | 60.109 | 366 | 133 | 4 | 4 | 357 | 3 | 367 | 2.65e-156 | 443 |
| MS.gene059702.t1 | AT5G65210 | 60.109 | 366 | 133 | 4 | 4 | 357 | 3 | 367 | 2.65e-156 | 443 |
| MS.gene059702.t1 | AT5G65210 | 60.109 | 366 | 133 | 4 | 4 | 357 | 3 | 367 | 2.65e-156 | 443 |
| MS.gene059702.t1 | AT5G65210 | 60.109 | 366 | 133 | 4 | 4 | 357 | 3 | 367 | 2.65e-156 | 443 |
| MS.gene059702.t1 | AT5G65210 | 60.109 | 366 | 133 | 4 | 4 | 357 | 3 | 367 | 2.65e-156 | 443 |
| MS.gene059702.t1 | AT5G65210 | 60.109 | 366 | 133 | 4 | 4 | 357 | 3 | 367 | 2.65e-156 | 443 |
| MS.gene059702.t1 | AT5G10030 | 61.264 | 364 | 128 | 5 | 4 | 357 | 3 | 363 | 2.96e-156 | 443 |
| MS.gene059702.t1 | AT5G10030 | 61.264 | 364 | 128 | 5 | 4 | 357 | 3 | 363 | 2.96e-156 | 443 |
| MS.gene059702.t1 | AT5G10030 | 61.264 | 364 | 128 | 5 | 4 | 357 | 3 | 363 | 2.96e-156 | 443 |
| MS.gene059702.t1 | AT5G10030 | 61.264 | 364 | 128 | 5 | 4 | 357 | 3 | 363 | 2.96e-156 | 443 |
| MS.gene059702.t1 | AT5G10030 | 61.264 | 364 | 128 | 5 | 4 | 357 | 3 | 363 | 2.96e-156 | 443 |
| MS.gene059702.t1 | AT5G65210 | 65.646 | 294 | 98 | 2 | 67 | 357 | 4 | 297 | 9.85e-139 | 396 |
| MS.gene059702.t1 | AT1G77920 | 49.602 | 377 | 159 | 4 | 1 | 357 | 2 | 367 | 5.53e-124 | 361 |
| MS.gene059702.t1 | AT1G22070 | 51.093 | 366 | 157 | 5 | 13 | 356 | 17 | 382 | 2.76e-122 | 358 |
| MS.gene059702.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 54 | 329 | 6.90e-93 | 282 |
| MS.gene059702.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 54 | 329 | 6.90e-93 | 282 |
| MS.gene059702.t1 | AT5G06950 | 52.759 | 290 | 124 | 4 | 75 | 356 | 46 | 330 | 8.43e-93 | 281 |
| MS.gene059702.t1 | AT5G06950 | 52.759 | 290 | 124 | 4 | 75 | 356 | 46 | 330 | 8.43e-93 | 281 |
| MS.gene059702.t1 | AT5G06950 | 52.759 | 290 | 124 | 4 | 75 | 356 | 46 | 330 | 8.43e-93 | 281 |
| MS.gene059702.t1 | AT5G06950 | 52.759 | 290 | 124 | 4 | 75 | 356 | 46 | 330 | 8.43e-93 | 281 |
| MS.gene059702.t1 | AT5G06950 | 52.759 | 290 | 124 | 4 | 75 | 356 | 46 | 330 | 8.43e-93 | 281 |
| MS.gene059702.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 178 | 453 | 1.75e-91 | 282 |
| MS.gene059702.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 178 | 453 | 1.75e-91 | 282 |
| MS.gene059702.t1 | AT1G08320 | 50.704 | 284 | 130 | 4 | 75 | 356 | 178 | 453 | 1.75e-91 | 282 |
| MS.gene059702.t1 | AT3G12250 | 51.186 | 295 | 131 | 4 | 70 | 356 | 14 | 303 | 7.48e-91 | 275 |
| MS.gene059702.t1 | AT3G12250 | 51.186 | 295 | 131 | 4 | 70 | 356 | 41 | 330 | 9.98e-91 | 275 |
| MS.gene059702.t1 | AT3G12250 | 51.186 | 295 | 131 | 4 | 70 | 356 | 41 | 330 | 9.98e-91 | 275 |
| MS.gene059702.t1 | AT3G12250 | 51.186 | 295 | 131 | 4 | 70 | 356 | 41 | 330 | 9.98e-91 | 275 |
| MS.gene059702.t1 | AT3G12250 | 51.186 | 295 | 131 | 4 | 70 | 356 | 41 | 330 | 9.98e-91 | 275 |
| MS.gene059702.t1 | AT3G12250 | 51.186 | 295 | 131 | 4 | 70 | 356 | 35 | 324 | 1.53e-90 | 275 |
| MS.gene059702.t1 | AT3G12250 | 48.589 | 319 | 143 | 5 | 54 | 356 | 42 | 355 | 4.01e-90 | 275 |
| MS.gene059702.t1 | AT5G06960 | 50.865 | 289 | 131 | 3 | 75 | 356 | 26 | 310 | 2.21e-89 | 271 |
| MS.gene059702.t1 | AT5G06960 | 50.865 | 289 | 131 | 3 | 75 | 356 | 46 | 330 | 2.58e-89 | 271 |
| MS.gene059702.t1 | AT5G06960 | 50.865 | 289 | 131 | 3 | 75 | 356 | 46 | 330 | 2.58e-89 | 271 |
| MS.gene059702.t1 | AT5G06839 | 40.541 | 370 | 194 | 6 | 3 | 356 | 56 | 415 | 2.50e-85 | 265 |
| MS.gene059702.t1 | AT5G06839 | 45.779 | 308 | 151 | 4 | 65 | 356 | 151 | 458 | 5.24e-85 | 265 |
| MS.gene059702.t1 | AT5G06839 | 39.623 | 371 | 197 | 5 | 3 | 356 | 56 | 416 | 1.44e-83 | 260 |
| MS.gene059702.t1 | AT1G68640 | 43.182 | 308 | 166 | 3 | 56 | 356 | 147 | 452 | 5.77e-75 | 239 |
| MS.gene059702.t1 | AT1G58330 | 26.906 | 223 | 146 | 6 | 139 | 346 | 3 | 223 | 2.88e-14 | 71.6 |
Find 72 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATCAGTGATATACAAAT+TGG | 0.178312 | 4.2:-10448375 | MS.gene059702:CDS |
| TGATTATTTAACTTCGTTTC+AGG | 0.187476 | 4.2:+10450450 | None:intergenic |
| GGATTGGATTCTAATAATTT+AGG | 0.214016 | 4.2:-10449359 | MS.gene059702:CDS |
| TAAGAGTCGTTTGAAGAAAA+AGG | 0.214551 | 4.2:-10449654 | MS.gene059702:intron |
| TCTGTCAATGGTTCAATTAA+AGG | 0.231131 | 4.2:+10448082 | None:intergenic |
| CCATACACCAATTTACTATA+TGG | 0.242264 | 4.2:-10450515 | MS.gene059702:CDS |
| TGCTCGATGGCTGCTTGCTT+TGG | 0.257053 | 4.2:-10447560 | MS.gene059702:CDS |
| GTTCTTCCCATATAGTAAAT+TGG | 0.257991 | 4.2:+10450508 | None:intergenic |
| TAGTAACTGTGTTAGCTTCT+TGG | 0.278886 | 4.2:+10450266 | None:intergenic |
| ATTCCAACATTTGTCTGTTT+AGG | 0.286691 | 4.2:+10448418 | None:intergenic |
| TAGTCAGAGGATGCTTCTTT+TGG | 0.297753 | 4.2:-10450319 | MS.gene059702:CDS |
| CAAATTGGGGAACTTGTAAA+TGG | 0.313309 | 4.2:-10448360 | MS.gene059702:CDS |
| TTTGTTTCCTCAAGAAATAT+TGG | 0.341373 | 4.2:-10450549 | MS.gene059702:CDS |
| TTTGCTGGCTCTGTAAATTC+AGG | 0.350309 | 4.2:-10449335 | MS.gene059702:intron |
| GCATGACTTCTCAAGATTAT+AGG | 0.355362 | 4.2:+10448042 | None:intergenic |
| AAATTGCAGGGATTGTATAT+TGG | 0.363352 | 4.2:-10449386 | MS.gene059702:intron |
| AGCTAACACAGTTACTAATA+AGG | 0.363384 | 4.2:-10450260 | MS.gene059702:intron |
| GTGTCGTTTAAAGCTGTTAC+AGG | 0.364560 | 4.2:-10449533 | MS.gene059702:CDS |
| GCTCGATGGCTGCTTGCTTT+GGG | 0.374474 | 4.2:-10447559 | MS.gene059702:CDS |
| CCATATAGTAAATTGGTGTA+TGG | 0.382687 | 4.2:+10450515 | None:intergenic |
| ATTGTATATTGGTGGTGGAT+TGG | 0.406379 | 4.2:-10449375 | MS.gene059702:CDS |
| AATAGAGAGGCTGGAAGCTC+TGG | 0.410741 | 4.2:-10447903 | MS.gene059702:CDS |
| AGGTGTTACCTTTAGAAGTT+CGG | 0.411150 | 4.2:+10448203 | None:intergenic |
| ATATCAGTGATATACAAATT+GGG | 0.413722 | 4.2:-10448374 | MS.gene059702:CDS |
| CTGTCAATGGTTCAATTAAA+GGG | 0.420015 | 4.2:+10448083 | None:intergenic |
| TGAAACGAAGTTAAATAATC+AGG | 0.423041 | 4.2:-10450448 | MS.gene059702:intron |
| TCGACCCTCCGAACTTCTAA+AGG | 0.428847 | 4.2:-10448211 | MS.gene059702:intron |
| AACCGTTGTTCCTCTGTCAA+TGG | 0.441867 | 4.2:+10448070 | None:intergenic |
| TAAGGGATTTGAGCAAACTT+TGG | 0.444298 | 4.2:-10447519 | MS.gene059702:CDS |
| GTGAATACTTTCAACGCCTA+AGG | 0.464354 | 4.2:-10447537 | MS.gene059702:CDS |
| CATACACCAATTTACTATAT+GGG | 0.478931 | 4.2:-10450514 | MS.gene059702:CDS |
| AGATGCCCTTTCACAAGGTA+TGG | 0.480625 | 4.2:-10448008 | MS.gene059702:CDS |
| AGAGCTAGATCATACAAAAC+AGG | 0.481991 | 4.2:-10449503 | MS.gene059702:intron |
| GGATATTGCAATAGAGAGGC+TGG | 0.484290 | 4.2:-10447912 | MS.gene059702:CDS |
| AAAGGGCATCTTCTGCTTGT+CGG | 0.484492 | 4.2:+10448020 | None:intergenic |
| TAACTGTGTTAGCTTCTTGG+TGG | 0.484546 | 4.2:+10450269 | None:intergenic |
| TCTGGCTAGCTTTGTGAACC+AGG | 0.487895 | 4.2:-10447885 | MS.gene059702:intron |
| CAGGGATTGTATATTGGTGG+TGG | 0.489623 | 4.2:-10449380 | MS.gene059702:CDS |
| CTTGTTGACACAGTTGCAGC+AGG | 0.514923 | 4.2:-10447968 | MS.gene059702:CDS |
| CATATAGTAAATTGGTGTAT+GGG | 0.519743 | 4.2:+10450516 | None:intergenic |
| AAAGTTTGCTCAAATCCCTT+AGG | 0.521782 | 4.2:+10447521 | None:intergenic |
| AGACCTAAACAGACAAATGT+TGG | 0.522384 | 4.2:-10448421 | MS.gene059702:CDS |
| TGCAGGTTCACGAGGACGAT+TGG | 0.528063 | 4.2:+10447495 | None:intergenic |
| TGAATACTTTCAACGCCTAA+GGG | 0.549102 | 4.2:-10447536 | MS.gene059702:CDS |
| ATGTGGAAAACAACAGCTGA+AGG | 0.550259 | 4.2:-10448258 | MS.gene059702:CDS |
| ACAAATTGAGAAGATGATGA+AGG | 0.553463 | 4.2:+10450567 | None:intergenic |
| AGACAAATGTTGGAATTGAA+AGG | 0.555362 | 4.2:-10448411 | MS.gene059702:CDS |
| ACAGGCTGATCATCTTCGAC+AGG | 0.558370 | 4.2:-10447626 | MS.gene059702:intron |
| GAAGAACATTTCAAGAGTAA+TGG | 0.562707 | 4.2:-10450492 | MS.gene059702:CDS |
| GCAGCAGGACAACTCGTTGA+AGG | 0.566836 | 4.2:-10447953 | MS.gene059702:CDS |
| CTCTTGCATGAAGACTATGC+AGG | 0.569640 | 4.2:+10447478 | None:intergenic |
| AGGAACTTACATTCCACAGA+TGG | 0.575188 | 4.2:-10447933 | MS.gene059702:CDS |
| CCGTACGTCAAACTGCTCGA+TGG | 0.578154 | 4.2:-10447573 | MS.gene059702:CDS |
| TATCAGTGATATACAAATTG+GGG | 0.581840 | 4.2:-10448373 | MS.gene059702:CDS |
| ATATACACCAATATTTCTTG+AGG | 0.587022 | 4.2:+10450542 | None:intergenic |
| TTGCAGGGATTGTATATTGG+TGG | 0.592067 | 4.2:-10449383 | MS.gene059702:intron |
| TAAGATGGAGTATGAACACT+GGG | 0.600728 | 4.2:-10448448 | MS.gene059702:CDS |
| TGTTACCTTTAGAAGTTCGG+AGG | 0.601165 | 4.2:+10448206 | None:intergenic |
| TTAAGATGGAGTATGAACAC+TGG | 0.603260 | 4.2:-10448449 | MS.gene059702:CDS |
| AACCATTGACAGAGGAACAA+CGG | 0.614266 | 4.2:-10448072 | MS.gene059702:CDS |
| GCAGAAGATGCCCTTTCACA+AGG | 0.620831 | 4.2:-10448013 | MS.gene059702:CDS |
| TTTAATTGAACCATTGACAG+AGG | 0.625048 | 4.2:-10448080 | MS.gene059702:CDS |
| TCTATGTTATCACTGGCATG+TGG | 0.630097 | 4.2:-10448275 | MS.gene059702:CDS |
| CCATCGAGCAGTTTGACGTA+CGG | 0.630335 | 4.2:+10447573 | None:intergenic |
| TCTATTGCAATATCCATCTG+TGG | 0.636700 | 4.2:+10447920 | None:intergenic |
| GTTACCTTTAGAAGTTCGGA+GGG | 0.640489 | 4.2:+10448207 | None:intergenic |
| GAAGACTATGCAGGTTCACG+AGG | 0.645466 | 4.2:+10447487 | None:intergenic |
| AGATGGATATTGCAATAGAG+AGG | 0.647680 | 4.2:-10447916 | MS.gene059702:CDS |
| TGTGGAAAACAACAGCTGAA+GGG | 0.647786 | 4.2:-10448257 | MS.gene059702:CDS |
| GTTTGAAATAGTGATTCATG+AGG | 0.660995 | 4.2:+10448337 | None:intergenic |
| ACGTCTCGCACAAAATCGAG+AGG | 0.680873 | 4.2:-10449684 | MS.gene059702:CDS |
| GATGGAGTATGAACACTGGG+TGG | 0.682481 | 4.2:-10448445 | MS.gene059702:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAACAAAATTTATTAGA+GGG | - | chr4.2:10449266-10449285 | MS.gene059702:intron | 15.0% |
| !! | AAGTATAAATTTAGTAAACT+TGG | + | chr4.2:10447650-10447669 | None:intergenic | 15.0% |
| !! | TAAGTAACAAAATTTATTAG+AGG | - | chr4.2:10449265-10449284 | MS.gene059702:intron | 15.0% |
| !! | TTGACAATAATAAACTTAAT+TGG | + | chr4.2:10450419-10450438 | None:intergenic | 15.0% |
| !!! | TAAGTTTTTATAAAGCAAAA+AGG | + | chr4.2:10448977-10448996 | None:intergenic | 15.0% |
| !!! | TGATATATAATATTAGCTTT+GGG | - | chr4.2:10449499-10449518 | MS.gene059702:intron | 15.0% |
| !!! | TTGATATATAATATTAGCTT+TGG | - | chr4.2:10449498-10449517 | MS.gene059702:intron | 15.0% |
| !! | AATATATAACATACATTACC+TGG | + | chr4.2:10450201-10450220 | None:intergenic | 20.0% |
| !! | ACAAAAGCAACATTAATTAA+AGG | + | chr4.2:10449128-10449147 | None:intergenic | 20.0% |
| !! | ATATCAGTGATATACAAATT+GGG | - | chr4.2:10449691-10449710 | MS.gene059702:CDS | 20.0% |
| !! | CAAATTAAAAAGGTTAAACT+AGG | - | chr4.2:10450377-10450396 | MS.gene059702:intron | 20.0% |
| !! | CACAAATTACCAAATTAAAA+AGG | - | chr4.2:10450367-10450386 | MS.gene059702:intron | 20.0% |
| !! | CCTTTAACAAAATTTCAAAA+TGG | + | chr4.2:10448133-10448152 | None:intergenic | 20.0% |
| !! | TAAGTTTATTATTGTCAAAC+AGG | - | chr4.2:10450421-10450440 | MS.gene059702:intron | 20.0% |
| !!! | AAACTTTGAGAAAATTCTTT+AGG | - | chr4.2:10448915-10448934 | MS.gene059702:intron | 20.0% |
| !!! | AGAAATAACAACTTTTAAGA+TGG | - | chr4.2:10449602-10449621 | MS.gene059702:intron | 20.0% |
| !!! | AGTTGTTATTTCTGTAAATT+AGG | + | chr4.2:10449595-10449614 | None:intergenic | 20.0% |
| !!! | CCATTTTGAAATTTTGTTAA+AGG | - | chr4.2:10448130-10448149 | MS.gene059702:intron | 20.0% |
| !!! | CTAGTTTAACCTTTTTAATT+TGG | + | chr4.2:10450379-10450398 | None:intergenic | 20.0% |
| !!! | GAAATTTTGGAAGAAATTAT+TGG | + | chr4.2:10449348-10449367 | None:intergenic | 20.0% |
| ! | AACATTAATTAAAGGAAAGG+AGG | + | chr4.2:10449120-10449139 | None:intergenic | 25.0% |
| ! | ACATTAATTAAAGGAAAGGA+GGG | + | chr4.2:10449119-10449138 | None:intergenic | 25.0% |
| ! | AGCAACATTAATTAAAGGAA+AGG | + | chr4.2:10449123-10449142 | None:intergenic | 25.0% |
| ! | ATATACACCAATATTTCTTG+AGG | + | chr4.2:10447526-10447545 | None:intergenic | 25.0% |
| ! | CAAAAAAGTGATTTCATCAT+AGG | + | chr4.2:10448820-10448839 | None:intergenic | 25.0% |
| ! | CATACACCAATTTACTATAT+GGG | - | chr4.2:10447551-10447570 | MS.gene059702:CDS | 25.0% |
| ! | CATATAGTAAATTGGTGTAT+GGG | + | chr4.2:10447552-10447571 | None:intergenic | 25.0% |
| ! | CATATCAGTGATATACAAAT+TGG | - | chr4.2:10449690-10449709 | MS.gene059702:CDS | 25.0% |
| ! | CGTATAATTTAGATTAGATG+AGG | - | chr4.2:10450225-10450244 | MS.gene059702:intron | 25.0% |
| ! | GATATTGAACAATATGAAGT+AGG | + | chr4.2:10448616-10448635 | None:intergenic | 25.0% |
| ! | GGATTGGATTCTAATAATTT+AGG | - | chr4.2:10448706-10448725 | MS.gene059702:intron | 25.0% |
| ! | TATCAGTGATATACAAATTG+GGG | - | chr4.2:10449692-10449711 | MS.gene059702:CDS | 25.0% |
| ! | TGAAACGAAGTTAAATAATC+AGG | - | chr4.2:10447617-10447636 | MS.gene059702:CDS | 25.0% |
| ! | TTTGTTTCCTCAAGAAATAT+TGG | - | chr4.2:10447516-10447535 | MS.gene059702:CDS | 25.0% |
| !! | CTTACTGCAGATATATATTT+TGG | - | chr4.2:10448993-10449012 | MS.gene059702:intron | 25.0% |
| !! | TCAATCACATTAATCCATTT+TGG | - | chr4.2:10448054-10448073 | MS.gene059702:CDS | 25.0% |
| !! | TGATTATTTAACTTCGTTTC+AGG | + | chr4.2:10447618-10447637 | None:intergenic | 25.0% |
| !! | TTTGGTAATTTGTGTGTTAA+TGG | + | chr4.2:10450361-10450380 | None:intergenic | 25.0% |
| !!! | GTTGGTTTGTTATTAAATTC+TGG | - | chr4.2:10448752-10448771 | MS.gene059702:intron | 25.0% |
| !!! | TCTAATAATTTAGGTTTTGC+TGG | - | chr4.2:10448715-10448734 | MS.gene059702:intron | 25.0% |
| !!! | TCTATTCTCAAACTAGTTTT+TGG | - | chr4.2:10449557-10449576 | MS.gene059702:CDS | 25.0% |
| !!! | TGCGTTTTTTTATGCTTATA+AGG | - | chr4.2:10448335-10448354 | MS.gene059702:CDS | 25.0% |
| !!! | TGTATGGACTATTTTTTACA+CGG | - | chr4.2:10447975-10447994 | MS.gene059702:CDS | 25.0% |
| AAATTGCAGGGATTGTATAT+TGG | - | chr4.2:10448679-10448698 | MS.gene059702:intron | 30.0% | |
| AACCTACAAAATCAACTACA+AGG | - | chr4.2:10448884-10448903 | MS.gene059702:intron | 30.0% | |
| ACAAATTGAGAAGATGATGA+AGG | + | chr4.2:10447501-10447520 | None:intergenic | 30.0% | |
| ACCTACAAAATCAACTACAA+GGG | - | chr4.2:10448885-10448904 | MS.gene059702:intron | 30.0% | |
| AGACAAATGTTGGAATTGAA+AGG | - | chr4.2:10449654-10449673 | MS.gene059702:intron | 30.0% | |
| AGCTAACACAGTTACTAATA+AGG | - | chr4.2:10447805-10447824 | MS.gene059702:intron | 30.0% | |
| ATCGATATACTTGATCAACA+TGG | - | chr4.2:10449886-10449905 | MS.gene059702:intron | 30.0% | |
| ATTCCAACATTTGTCTGTTT+AGG | + | chr4.2:10449650-10449669 | None:intergenic | 30.0% | |
| ATTGCTCAATCAGTATTTCA+TGG | - | chr4.2:10448159-10448178 | MS.gene059702:intron | 30.0% | |
| CCATACACCAATTTACTATA+TGG | - | chr4.2:10447550-10447569 | MS.gene059702:CDS | 30.0% | |
| CCATATAGTAAATTGGTGTA+TGG | + | chr4.2:10447553-10447572 | None:intergenic | 30.0% | |
| CTAAGTTTCTACAAAGTTTG+AGG | + | chr4.2:10448220-10448239 | None:intergenic | 30.0% | |
| CTGTCAATGGTTCAATTAAA+GGG | + | chr4.2:10449985-10450004 | None:intergenic | 30.0% | |
| GAAGAACATTTCAAGAGTAA+TGG | - | chr4.2:10447573-10447592 | MS.gene059702:CDS | 30.0% | |
| GAATAGAGTTCAATACAAGA+AGG | + | chr4.2:10449544-10449563 | None:intergenic | 30.0% | |
| GAATCAAATGCTTGTTTGTT+TGG | + | chr4.2:10448472-10448491 | None:intergenic | 30.0% | |
| GTTCTTCCCATATAGTAAAT+TGG | + | chr4.2:10447560-10447579 | None:intergenic | 30.0% | |
| TAAGAGTCGTTTGAAGAAAA+AGG | - | chr4.2:10448411-10448430 | MS.gene059702:CDS | 30.0% | |
| TCCATACATGTTTGATATGA+CGG | + | chr4.2:10447963-10447982 | None:intergenic | 30.0% | |
| TCGATATACTTGATCAACAT+GGG | - | chr4.2:10449887-10449906 | MS.gene059702:intron | 30.0% | |
| TCTGTCAATGGTTCAATTAA+AGG | + | chr4.2:10449986-10450005 | None:intergenic | 30.0% | |
| TGGATTCAGAGTTTCAAAAT+TGG | + | chr4.2:10449328-10449347 | None:intergenic | 30.0% | |
| TTAATGCAGAGAGAAATGTT+TGG | - | chr4.2:10449232-10449251 | MS.gene059702:intron | 30.0% | |
| TTGAACTTAACATTGCACAT+GGG | + | chr4.2:10448004-10448023 | None:intergenic | 30.0% | |
| TTTAATTGAACCATTGACAG+AGG | - | chr4.2:10449985-10450004 | MS.gene059702:intron | 30.0% | |
| ! | AGAGAGAAATGTTTGGAATA+AGG | - | chr4.2:10449239-10449258 | MS.gene059702:intron | 30.0% |
| ! | GATGTTTTCTATGTTATCAC+TGG | - | chr4.2:10449783-10449802 | MS.gene059702:intron | 30.0% |
| ! | GTTGATCAAGTATATCGATT+AGG | + | chr4.2:10449885-10449904 | None:intergenic | 30.0% |
| ! | GTTTGAAATAGTGATTCATG+AGG | + | chr4.2:10449731-10449750 | None:intergenic | 30.0% |
| ! | TGGGTTGAACAAAATTAATG+TGG | + | chr4.2:10447940-10447959 | None:intergenic | 30.0% |
| ! | TTCCAAAATTTCAAGTAAGC+TGG | - | chr4.2:10449356-10449375 | MS.gene059702:CDS | 30.0% |
| ! | TTTTTCCATACCTTGTGAAA+GGG | + | chr4.2:10450065-10450084 | None:intergenic | 30.0% |
| !! | ACTGCAGATATATATTTTGG+TGG | - | chr4.2:10448996-10449015 | MS.gene059702:intron | 30.0% |
| !! | AGTTTTATCAGAAGTATGCA+TGG | - | chr4.2:10450323-10450342 | MS.gene059702:intron | 30.0% |
| !!! | AGCATTTTAGAACCACATTT+TGG | - | chr4.2:10448253-10448272 | MS.gene059702:CDS | 30.0% |
| !!! | GATGCTTCTTTTGGAATATT+GGG | - | chr4.2:10447755-10447774 | MS.gene059702:intron | 30.0% |
| !!! | GTATGGACTATTTTTTACAC+GGG | - | chr4.2:10447976-10447995 | MS.gene059702:CDS | 30.0% |
| !!! | TATGGACTATTTTTTACACG+GGG | - | chr4.2:10447977-10447996 | MS.gene059702:CDS | 30.0% |
| AAAAGGACATGCATGCAAAA+AGG | + | chr4.2:10448960-10448979 | None:intergenic | 35.0% | |
| AAAAGTCGACCAATCTGAAA+GGG | - | chr4.2:10448077-10448096 | MS.gene059702:CDS | 35.0% | |
| ACAAGGTATGGAAAAACTAC+AGG | - | chr4.2:10450069-10450088 | MS.gene059702:intron | 35.0% | |
| ACATCCAAAATTTGGAAGCA+GGG | + | chr4.2:10448309-10448328 | None:intergenic | 35.0% | |
| ACCGTCATATCAAACATGTA+TGG | - | chr4.2:10447959-10447978 | MS.gene059702:CDS | 35.0% | |
| AGACCTAAACAGACAAATGT+TGG | - | chr4.2:10449644-10449663 | MS.gene059702:intron | 35.0% | |
| AGAGCTAGATCATACAAAAC+AGG | - | chr4.2:10448562-10448581 | MS.gene059702:intron | 35.0% | |
| AGATGGATATTGCAATAGAG+AGG | - | chr4.2:10450149-10450168 | MS.gene059702:intron | 35.0% | |
| AGTGAGGTCATTGCTAAAAT+AGG | + | chr4.2:10449081-10449100 | None:intergenic | 35.0% | |
| ATACATGTTTGATATGACGG+TGG | + | chr4.2:10447960-10447979 | None:intergenic | 35.0% | |
| ATGTTTGTGATGAGATTTGC+AGG | - | chr4.2:10449952-10449971 | MS.gene059702:intron | 35.0% | |
| CAAATTGGGGAACTTGTAAA+TGG | - | chr4.2:10449705-10449724 | MS.gene059702:intron | 35.0% | |
| CAAGAAGGAAAACATACTCA+AGG | + | chr4.2:10449529-10449548 | None:intergenic | 35.0% | |
| CAAGGTATGGAAAAACTACA+GGG | - | chr4.2:10450070-10450089 | MS.gene059702:intron | 35.0% | |
| CACAAACATACATTATGCCA+TGG | + | chr4.2:10449941-10449960 | None:intergenic | 35.0% | |
| CATCAAGAGATTGACAAATG+AGG | + | chr4.2:10448654-10448673 | None:intergenic | 35.0% | |
| CGATATACTTGATCAACATG+GGG | - | chr4.2:10449888-10449907 | MS.gene059702:intron | 35.0% | |
| CTTGATGCAACAAAATTGCA+GGG | - | chr4.2:10448667-10448686 | MS.gene059702:intron | 35.0% | |
| GCATGACTTCTCAAGATTAT+AGG | + | chr4.2:10450026-10450045 | None:intergenic | 35.0% | |
| GTCGTTTGAAGAAAAAGGTT+TGG | - | chr4.2:10448416-10448435 | MS.gene059702:CDS | 35.0% | |
| GTTGAACTTAACATTGCACA+TGG | + | chr4.2:10448005-10448024 | None:intergenic | 35.0% | |
| TAAAACTTATACTCCTGCCA+TGG | + | chr4.2:10450310-10450329 | None:intergenic | 35.0% | |
| TAAGATGGAGTATGAACACT+GGG | - | chr4.2:10449617-10449636 | MS.gene059702:intron | 35.0% | |
| TAAGGGATTTGAGCAAACTT+TGG | - | chr4.2:10450546-10450565 | MS.gene059702:CDS | 35.0% | |
| TACATGTTTGATATGACGGT+GGG | + | chr4.2:10447959-10447978 | None:intergenic | 35.0% | |
| TCACACCAAAAAATTTCCAC+AGG | + | chr4.2:10449299-10449318 | None:intergenic | 35.0% | |
| TCTATTGCAATATCCATCTG+TGG | + | chr4.2:10450148-10450167 | None:intergenic | 35.0% | |
| TCTTGATGCAACAAAATTGC+AGG | - | chr4.2:10448666-10448685 | MS.gene059702:intron | 35.0% | |
| TGAATACTTTCAACGCCTAA+GGG | - | chr4.2:10450529-10450548 | MS.gene059702:CDS | 35.0% | |
| TGCTAAATACCTATAGTCAG+AGG | - | chr4.2:10447733-10447752 | MS.gene059702:intron | 35.0% | |
| TGTCACTGCTCTTATAAATG+TGG | - | chr4.2:10448790-10448809 | MS.gene059702:intron | 35.0% | |
| TTAAGATGGAGTATGAACAC+TGG | - | chr4.2:10449616-10449635 | MS.gene059702:intron | 35.0% | |
| TTAGACACTACATTCTGTTC+TGG | - | chr4.2:10449475-10449494 | MS.gene059702:intron | 35.0% | |
| TTAGATGAGGTTATGAGTAG+TGG | - | chr4.2:10450238-10450257 | MS.gene059702:intron | 35.0% | |
| TTGAGGCATAAGGAAAGAAT+GGG | + | chr4.2:10448203-10448222 | None:intergenic | 35.0% | |
| ! | AAAGTTTGCTCAAATCCCTT+AGG | + | chr4.2:10450547-10450566 | None:intergenic | 35.0% |
| ! | AGCCAGCTTACTTGAAATTT+TGG | + | chr4.2:10449361-10449380 | None:intergenic | 35.0% |
| ! | AGGTGTTACCTTTAGAAGTT+CGG | + | chr4.2:10449865-10449884 | None:intergenic | 35.0% |
| ! | GTTTTTCCATACCTTGTGAA+AGG | + | chr4.2:10450066-10450085 | None:intergenic | 35.0% |
| ! | TAGTAACTGTGTTAGCTTCT+TGG | + | chr4.2:10447802-10447821 | None:intergenic | 35.0% |
| ! | TCTACAAAGTTTGAGGCATA+AGG | + | chr4.2:10448213-10448232 | None:intergenic | 35.0% |
| ! | TTGTCGCTTCAACATAATCA+AGG | - | chr4.2:10447912-10447931 | MS.gene059702:CDS | 35.0% |
| ! | TTTGAGGCATAAGGAAAGAA+TGG | + | chr4.2:10448204-10448223 | None:intergenic | 35.0% |
| !! | ATTGGTCGACTTTTCCAAAA+TGG | + | chr4.2:10448071-10448090 | None:intergenic | 35.0% |
| !! | ATTGTATATTGGTGGTGGAT+TGG | - | chr4.2:10448690-10448709 | MS.gene059702:intron | 35.0% |
| !! | TCCCTTGTAGTTGATTTTGT+AGG | + | chr4.2:10448889-10448908 | None:intergenic | 35.0% |
| !!! | CTACTCCTGTGGAAATTTTT+TGG | - | chr4.2:10449291-10449310 | MS.gene059702:intron | 35.0% |
| !!! | GCAGATATATATTTTGGTGG+TGG | - | chr4.2:10448999-10449018 | MS.gene059702:intron | 35.0% |
| !!! | GGATGCTTCTTTTGGAATAT+TGG | - | chr4.2:10447754-10447773 | MS.gene059702:intron | 35.0% |
| AACCATTGACAGAGGAACAA+CGG | - | chr4.2:10449993-10450012 | MS.gene059702:intron | 40.0% | |
| AATAGGATTTGAGTAGCTGC+TGG | + | chr4.2:10449064-10449083 | None:intergenic | 40.0% | |
| AGGAACTTACATTCCACAGA+TGG | - | chr4.2:10450132-10450151 | MS.gene059702:intron | 40.0% | |
| ATGTGGAAAACAACAGCTGA+AGG | - | chr4.2:10449807-10449826 | MS.gene059702:intron | 40.0% | |
| CAAGCCAGACATCCAAAATT+TGG | + | chr4.2:10448317-10448336 | None:intergenic | 40.0% | |
| CATCCAAAATTTGGAAGCAG+GGG | + | chr4.2:10448308-10448327 | None:intergenic | 40.0% | |
| GAAAAGTCGACCAATCTGAA+AGG | - | chr4.2:10448076-10448095 | MS.gene059702:CDS | 40.0% | |
| GACACAACAGTTATGAGTAG+TGG | - | chr4.2:10450270-10450289 | MS.gene059702:CDS | 40.0% | |
| GACATCCAAAATTTGGAAGC+AGG | + | chr4.2:10448310-10448329 | None:intergenic | 40.0% | |
| GAGTATCTGAATGTACAGTG+AGG | + | chr4.2:10449097-10449116 | None:intergenic | 40.0% | |
| GATTCCTGACGTTTCATAAC+AGG | - | chr4.2:10448487-10448506 | MS.gene059702:intron | 40.0% | |
| GTGAATACTTTCAACGCCTA+AGG | - | chr4.2:10450528-10450547 | MS.gene059702:CDS | 40.0% | |
| TATGTTGAAGCGACAAAGTG+CGG | + | chr4.2:10447908-10447927 | None:intergenic | 40.0% | |
| TCTATGTTATCACTGGCATG+TGG | - | chr4.2:10449790-10449809 | MS.gene059702:intron | 40.0% | |
| TGCAAAGTGAGTCCAAAATG+TGG | + | chr4.2:10448268-10448287 | None:intergenic | 40.0% | |
| TGGAAAACAATGCTGATCCA+TGG | - | chr4.2:10450290-10450309 | MS.gene059702:CDS | 40.0% | |
| TGTGGAAAACAACAGCTGAA+GGG | - | chr4.2:10449808-10449827 | MS.gene059702:intron | 40.0% | |
| TTGCAGGGATTGTATATTGG+TGG | - | chr4.2:10448682-10448701 | MS.gene059702:intron | 40.0% | |
| ! | CTGCTGTCATATTTCTACCA+TGG | - | chr4.2:10449921-10449940 | MS.gene059702:intron | 40.0% |
| ! | GAAGGGTTTTTCTTGTGGAT+TGG | - | chr4.2:10449825-10449844 | MS.gene059702:intron | 40.0% |
| ! | GCTTCCAAATTTTGGATGTC+TGG | - | chr4.2:10448310-10448329 | MS.gene059702:CDS | 40.0% |
| ! | GTTACCTTTAGAAGTTCGGA+GGG | + | chr4.2:10449861-10449880 | None:intergenic | 40.0% |
| ! | TAACTGTGTTAGCTTCTTGG+TGG | + | chr4.2:10447799-10447818 | None:intergenic | 40.0% |
| ! | TAGTCAGAGGATGCTTCTTT+TGG | - | chr4.2:10447746-10447765 | MS.gene059702:intron | 40.0% |
| ! | TGTTACCTTTAGAAGTTCGG+AGG | + | chr4.2:10449862-10449881 | None:intergenic | 40.0% |
| ! | TTGCTACTTGCTTGATATCG+CGG | - | chr4.2:10447838-10447857 | MS.gene059702:intron | 40.0% |
| !! | AAGAAGCATCCTCTGACTAT+AGG | + | chr4.2:10447745-10447764 | None:intergenic | 40.0% |
| !! | GTGTCGTTTAAAGCTGTTAC+AGG | - | chr4.2:10448532-10448551 | MS.gene059702:intron | 40.0% |
| !! | TTTGCTGGCTCTGTAAATTC+AGG | - | chr4.2:10448730-10448749 | MS.gene059702:intron | 40.0% |
| AAACAATGCTGATCCATGGC+AGG | - | chr4.2:10450294-10450313 | MS.gene059702:CDS | 45.0% | |
| AACCGTTGTTCCTCTGTCAA+TGG | + | chr4.2:10449998-10450017 | None:intergenic | 45.0% | |
| ACTTTGCACTGCAGATTAGG+AGG | - | chr4.2:10448280-10448299 | MS.gene059702:CDS | 45.0% | |
| AGATGCCCTTTCACAAGGTA+TGG | - | chr4.2:10450057-10450076 | MS.gene059702:intron | 45.0% | |
| AGGCCAATAAGCCCTAGTTT+AGG | + | chr4.2:10449026-10449045 | None:intergenic | 45.0% | |
| CAGGGATTGTATATTGGTGG+TGG | - | chr4.2:10448685-10448704 | MS.gene059702:intron | 45.0% | |
| CTCACTTTGCACTGCAGATT+AGG | - | chr4.2:10448277-10448296 | MS.gene059702:CDS | 45.0% | |
| CTTTGCACTGCAGATTAGGA+GGG | - | chr4.2:10448281-10448300 | MS.gene059702:CDS | 45.0% | |
| GCTGGCTATTATGTACCTAG+TGG | - | chr4.2:10449374-10449393 | MS.gene059702:CDS | 45.0% | |
| GGACCTAAACTAGGGCTTAT+TGG | - | chr4.2:10449020-10449039 | MS.gene059702:intron | 45.0% | |
| GGATATTGCAATAGAGAGGC+TGG | - | chr4.2:10450153-10450172 | MS.gene059702:intron | 45.0% | |
| GTGATGAGATTTGCAGGTTC+TGG | - | chr4.2:10449958-10449977 | MS.gene059702:intron | 45.0% | |
| TGAGCCTGTTATGAAACGTC+AGG | + | chr4.2:10448494-10448513 | None:intergenic | 45.0% | |
| ! | CAGCTGAAGGGTTTTTCTTG+TGG | - | chr4.2:10449820-10449839 | MS.gene059702:intron | 45.0% |
| !! | AAAGGGCATCTTCTGCTTGT+CGG | + | chr4.2:10450048-10450067 | None:intergenic | 45.0% |
| !! | ATTAGAGGGTACTACTCCTG+TGG | - | chr4.2:10449280-10449299 | MS.gene059702:intron | 45.0% |
| !! | CTGGCTCTGTAAATTCAGGT+TGG | - | chr4.2:10448734-10448753 | MS.gene059702:intron | 45.0% |
| !! | TTGGTGGTGGACCTAAACTA+GGG | - | chr4.2:10449012-10449031 | MS.gene059702:intron | 45.0% |
| !! | TTTGGTGGTGGACCTAAACT+AGG | - | chr4.2:10449011-10449030 | MS.gene059702:intron | 45.0% |
| !!! | GGGTTTTTCTTGTGGATTGG+AGG | - | chr4.2:10449828-10449847 | MS.gene059702:intron | 45.0% |
| AATAGAGAGGCTGGAAGCTC+TGG | - | chr4.2:10450162-10450181 | MS.gene059702:intron | 50.0% | |
| ACAGGCTGATCATCTTCGAC+AGG | - | chr4.2:10450439-10450458 | MS.gene059702:intron | 50.0% | |
| ACGTCTCGCACAAAATCGAG+AGG | - | chr4.2:10448381-10448400 | MS.gene059702:CDS | 50.0% | |
| CCATCGAGCAGTTTGACGTA+CGG | + | chr4.2:10450495-10450514 | None:intergenic | 50.0% | |
| CTTGTTGACACAGTTGCAGC+AGG | - | chr4.2:10450097-10450116 | MS.gene059702:intron | 50.0% | |
| GATGGAGTATGAACACTGGG+TGG | - | chr4.2:10449620-10449639 | MS.gene059702:intron | 50.0% | |
| GATTTGAGTAGCTGCTGGTC+TGG | + | chr4.2:10449059-10449078 | None:intergenic | 50.0% | |
| GCAGAAGATGCCCTTTCACA+AGG | - | chr4.2:10450052-10450071 | MS.gene059702:intron | 50.0% | |
| TCGACCCTCCGAACTTCTAA+AGG | - | chr4.2:10449854-10449873 | MS.gene059702:intron | 50.0% | |
| TCGCATCAGCCCTTTCAGAT+TGG | + | chr4.2:10448089-10448108 | None:intergenic | 50.0% | |
| TTGTACACAGTGCTGCCACT+AGG | + | chr4.2:10449392-10449411 | None:intergenic | 50.0% | |
| ! | GGCTTATTGGCCTCACCATT+GGG | - | chr4.2:10449033-10449052 | MS.gene059702:intron | 50.0% |
| ! | GGTCCCCTGCTTCCAAATTT+TGG | - | chr4.2:10448302-10448321 | MS.gene059702:CDS | 50.0% |
| !! | TCTGGCTAGCTTTGTGAACC+AGG | - | chr4.2:10450180-10450199 | MS.gene059702:intron | 50.0% |
| CCGTACGTCAAACTGCTCGA+TGG | - | chr4.2:10450492-10450511 | MS.gene059702:CDS | 55.0% | |
| GCAGCAGGACAACTCGTTGA+AGG | - | chr4.2:10450112-10450131 | MS.gene059702:intron | 55.0% | |
| GCTCGATGGCTGCTTGCTTT+GGG | - | chr4.2:10450506-10450525 | MS.gene059702:CDS | 55.0% | |
| TGCAGGTTCACGAGGACGAT+TGG | + | chr4.2:10450573-10450592 | None:intergenic | 55.0% | |
| TGCTCGATGGCTGCTTGCTT+TGG | - | chr4.2:10450505-10450524 | MS.gene059702:CDS | 55.0% | |
| ! | GGGCTTATTGGCCTCACCAT+TGG | - | chr4.2:10449032-10449051 | MS.gene059702:intron | 55.0% |
| ! | TAGCTGCTGGTCTGGCCCAA+TGG | + | chr4.2:10449051-10449070 | None:intergenic | 60.0% |
| ! | GCTGGTCTGGCCCAATGGTG+AGG | + | chr4.2:10449046-10449065 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 10447492 | 10450595 | 10447492 | ID=MS.gene059702 |
| chr4.2 | mRNA | 10447492 | 10450595 | 10447492 | ID=MS.gene059702.t1;Parent=MS.gene059702 |
| chr4.2 | exon | 10450449 | 10450595 | 10450449 | ID=MS.gene059702.t1.exon1;Parent=MS.gene059702.t1 |
| chr4.2 | CDS | 10450449 | 10450595 | 10450449 | ID=cds.MS.gene059702.t1;Parent=MS.gene059702.t1 |
| chr4.2 | exon | 10450261 | 10450338 | 10450261 | ID=MS.gene059702.t1.exon2;Parent=MS.gene059702.t1 |
| chr4.2 | CDS | 10450261 | 10450338 | 10450261 | ID=cds.MS.gene059702.t1;Parent=MS.gene059702.t1 |
| chr4.2 | exon | 10449655 | 10449714 | 10449655 | ID=MS.gene059702.t1.exon3;Parent=MS.gene059702.t1 |
| chr4.2 | CDS | 10449655 | 10449714 | 10449655 | ID=cds.MS.gene059702.t1;Parent=MS.gene059702.t1 |
| chr4.2 | exon | 10449504 | 10449578 | 10449504 | ID=MS.gene059702.t1.exon4;Parent=MS.gene059702.t1 |
| chr4.2 | CDS | 10449504 | 10449578 | 10449504 | ID=cds.MS.gene059702.t1;Parent=MS.gene059702.t1 |
| chr4.2 | exon | 10449336 | 10449399 | 10449336 | ID=MS.gene059702.t1.exon5;Parent=MS.gene059702.t1 |
| chr4.2 | CDS | 10449336 | 10449399 | 10449336 | ID=cds.MS.gene059702.t1;Parent=MS.gene059702.t1 |
| chr4.2 | exon | 10448212 | 10448483 | 10448212 | ID=MS.gene059702.t1.exon6;Parent=MS.gene059702.t1 |
| chr4.2 | CDS | 10448212 | 10448483 | 10448212 | ID=cds.MS.gene059702.t1;Parent=MS.gene059702.t1 |
| chr4.2 | exon | 10447886 | 10448113 | 10447886 | ID=MS.gene059702.t1.exon7;Parent=MS.gene059702.t1 |
| chr4.2 | CDS | 10447886 | 10448113 | 10447886 | ID=cds.MS.gene059702.t1;Parent=MS.gene059702.t1 |
| chr4.2 | exon | 10447492 | 10447644 | 10447492 | ID=MS.gene059702.t1.exon8;Parent=MS.gene059702.t1 |
| chr4.2 | CDS | 10447492 | 10447644 | 10447492 | ID=cds.MS.gene059702.t1;Parent=MS.gene059702.t1 |
| Gene Sequence |
| Protein sequence |
