Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28223.t1 | XP_003598991.1 | 95.6 | 298 | 12 | 1 | 1 | 298 | 1 | 297 | 7.70E-162 | 579.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28223.t1 | O82796 | 66.7 | 297 | 96 | 2 | 1 | 297 | 1 | 294 | 3.9e-106 | 386.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28223.t1 | G7IZA6 | 95.6 | 298 | 12 | 1 | 1 | 298 | 1 | 297 | 5.5e-162 | 579.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049887 | MS.gene28223 | 0.833791 | 4.35E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene28223 | 0.815685 | 8.14E-52 | -1.69E-46 |
| MS.gene051388 | MS.gene28223 | 0.80243 | 5.63E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene28223 | 0.80147 | 8.87E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene28223 | 0.830046 | 3.66E-55 | -1.69E-46 |
| MS.gene053144 | MS.gene28223 | 0.819805 | 9.58E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene28223 | 0.821923 | 3.12E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene28223 | 0.832933 | 7.13E-56 | -1.69E-46 |
| MS.gene055466 | MS.gene28223 | 0.837008 | 6.70E-57 | -1.69E-46 |
| MS.gene055468 | MS.gene28223 | 0.853768 | 1.92E-61 | -1.69E-46 |
| MS.gene055469 | MS.gene28223 | 0.805763 | 1.14E-49 | -1.69E-46 |
| MS.gene055580 | MS.gene28223 | -0.838497 | 2.78E-57 | -1.69E-46 |
| MS.gene056043 | MS.gene28223 | -0.843395 | 1.44E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28223.t1 | MTR_3g025840 | 95.638 | 298 | 12 | 1 | 1 | 298 | 1 | 297 | 0.0 | 589 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28223.t1 | AT1G18640 | 66.667 | 297 | 96 | 2 | 1 | 297 | 1 | 294 | 8.12e-140 | 396 |
| MS.gene28223.t1 | AT1G18640 | 64.876 | 242 | 82 | 2 | 1 | 242 | 1 | 239 | 5.52e-104 | 305 |
Find 64 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAGCTCTGGACAGTTTC+TGG | 0.064331 | 3.3:+17713941 | MS.gene28223:CDS |
| TGCCGTTAGCCTTTAGTTTC+TGG | 0.128110 | 3.3:-17712864 | None:intergenic |
| TTGGTGCTGGTTAGATATTC+TGG | 0.193850 | 3.3:+17710957 | MS.gene28223:intron |
| ATCAACACCAAATCTCAAAA+AGG | 0.264839 | 3.3:+17710200 | MS.gene28223:CDS |
| GGTACGTTTGGATTTCAAAT+TGG | 0.283743 | 3.3:+17710222 | MS.gene28223:CDS |
| TCAAGACCTTATAAATTCAT+TGG | 0.322272 | 3.3:+17715798 | MS.gene28223:CDS |
| GTTACCCCAATGAATTTATA+AGG | 0.326728 | 3.3:-17715804 | None:intergenic |
| GGAAGCTCTGGACAGTTTCT+GGG | 0.341736 | 3.3:+17713942 | MS.gene28223:CDS |
| CAAGACCTTATAAATTCATT+GGG | 0.350346 | 3.3:+17715799 | MS.gene28223:CDS |
| ATGGAAGCTTTGATCAGTTA+TGG | 0.352182 | 3.3:+17710120 | MS.gene28223:CDS |
| GTAAAACCATTGACACGAAC+TGG | 0.356810 | 3.3:-17710150 | None:intergenic |
| AAGCCTGTCGCGTCAATACT+TGG | 0.363859 | 3.3:+17713879 | MS.gene28223:intron |
| TTGAGGAAGCCTTGGCTGCT+AGG | 0.404143 | 3.3:+17711216 | MS.gene28223:CDS |
| TGGAAGCTTTGATCAGTTAT+GGG | 0.406259 | 3.3:+17710121 | MS.gene28223:CDS |
| ATCAACCCAGTTCGTGTCAA+TGG | 0.415173 | 3.3:+17710144 | MS.gene28223:CDS |
| AAGCATGTATATCTGATCTC+AGG | 0.421226 | 3.3:+17712886 | MS.gene28223:CDS |
| TGGATTAACTCTTCAATGCC+AGG | 0.447873 | 3.3:-17712844 | None:intergenic |
| GCAGCCAAGGCTTCCTCAAA+AGG | 0.454284 | 3.3:-17711212 | None:intergenic |
| CACATTTAGGCTCGTAGACC+AGG | 0.464103 | 3.3:+17715691 | MS.gene28223:intron |
| ACGAAAATGAGCATACTTCA+AGG | 0.468656 | 3.3:+17713970 | MS.gene28223:CDS |
| TTAATATGCAGGCTTTCCCC+TGG | 0.473746 | 3.3:+17712826 | MS.gene28223:intron |
| TGTGGATAGCACCGTGTGCC+TGG | 0.483552 | 3.3:+17711014 | MS.gene28223:CDS |
| GACATGTTCATTTGCTATGC+TGG | 0.485489 | 3.3:+17715721 | MS.gene28223:CDS |
| ATTATGGCTGCTGCTACTGT+TGG | 0.489665 | 3.3:+17710285 | MS.gene28223:CDS |
| AGATTTGGTGTTGATTCAAA+CGG | 0.494027 | 3.3:-17710192 | None:intergenic |
| CTTGATTTGTTCGACTGCAG+TGG | 0.507337 | 3.3:-17714006 | None:intergenic |
| CGGTCTCAATCTTACTTTGG+CGG | 0.508451 | 3.3:-17711293 | None:intergenic |
| GGTTAGATATTCTGGAGCTA+TGG | 0.514274 | 3.3:+17710965 | MS.gene28223:intron |
| CAAAGATAACCTAGCAGCCA+AGG | 0.517140 | 3.3:-17711225 | None:intergenic |
| AGAGTTAATCCAGAAACTAA+AGG | 0.527183 | 3.3:+17712855 | MS.gene28223:CDS |
| CAGGAAAAGCTGTTGCAGAA+TGG | 0.530124 | 3.3:+17711073 | MS.gene28223:CDS |
| ATTCTGGAGCTATGGAAGAA+TGG | 0.533369 | 3.3:+17710973 | MS.gene28223:CDS |
| CTGTTGCTGCAAAAGCTGAT+TGG | 0.533885 | 3.3:+17715761 | MS.gene28223:CDS |
| AGCATGTATATCTGATCTCA+GGG | 0.541970 | 3.3:+17712887 | MS.gene28223:CDS |
| GGATTAACTCTTCAATGCCA+GGG | 0.542136 | 3.3:-17712843 | None:intergenic |
| ATTCTCAAGTTGAGACATAG+AGG | 0.545564 | 3.3:-17711255 | None:intergenic |
| AGCACCGTGTGCCTGGATGA+AGG | 0.550051 | 3.3:+17711021 | MS.gene28223:CDS |
| GTAGCAGCAGCCATAATCAA+AGG | 0.552287 | 3.3:-17710279 | None:intergenic |
| TACAAAGCATTAACTATGGT+CGG | 0.554184 | 3.3:+17714115 | MS.gene28223:CDS |
| GCATTAACTATGGTCGGAGA+TGG | 0.555326 | 3.3:+17714121 | MS.gene28223:CDS |
| ACTGTTGGAAATTCACAAGT+TGG | 0.556078 | 3.3:+17710300 | MS.gene28223:CDS |
| GCTCGTCAATTCCTTCATCC+AGG | 0.561151 | 3.3:-17711032 | None:intergenic |
| TAAAACCATTGACACGAACT+GGG | 0.565590 | 3.3:-17710149 | None:intergenic |
| TGGGTACAAAGCATTAACTA+TGG | 0.569013 | 3.3:+17714111 | MS.gene28223:CDS |
| ATCCCAAGTATTGACGCGAC+AGG | 0.571726 | 3.3:-17713882 | None:intergenic |
| ATGAACATGTCGGCACCACC+TGG | 0.573609 | 3.3:-17715709 | None:intergenic |
| GAGAACACGGTTCCTTCCAA+AGG | 0.584179 | 3.3:+17710330 | MS.gene28223:CDS |
| AGCCTGTCGCGTCAATACTT+GGG | 0.595635 | 3.3:+17713880 | MS.gene28223:intron |
| ATCCAGAAACTAAAGGCTAA+CGG | 0.595873 | 3.3:+17712862 | MS.gene28223:CDS |
| GTTTGGATTTCAAATTGGAG+TGG | 0.598685 | 3.3:+17710227 | MS.gene28223:CDS |
| GAATTATGTAAACCTTTGGA+AGG | 0.598930 | 3.3:-17710342 | None:intergenic |
| TGCAGTCGAACAAATCAAGA+AGG | 0.599148 | 3.3:+17714010 | MS.gene28223:CDS |
| TTCTCAAGTTGAGACATAGA+GGG | 0.613578 | 3.3:-17711254 | None:intergenic |
| TGATGCAGTGTGCTTTGATG+TGG | 0.622176 | 3.3:+17710996 | MS.gene28223:CDS |
| CTGTTGCAGAATGGACTGCA+AGG | 0.622394 | 3.3:+17711082 | MS.gene28223:CDS |
| AATTCCTTCATCCAGGCACA+CGG | 0.634476 | 3.3:-17711025 | None:intergenic |
| AAGACCTTATAAATTCATTG+GGG | 0.634548 | 3.3:+17715800 | MS.gene28223:CDS |
| GAGCATACTTCAAGGAGCGG+AGG | 0.639616 | 3.3:+17713978 | MS.gene28223:CDS |
| AGCATAGCAAATGAACATGT+CGG | 0.648099 | 3.3:-17715719 | None:intergenic |
| AATGAGCATACTTCAAGGAG+CGG | 0.658563 | 3.3:+17713975 | MS.gene28223:CDS |
| CATGTATATCTGATCTCAGG+GGG | 0.663352 | 3.3:+17712889 | MS.gene28223:CDS |
| GATTAACTCTTCAATGCCAG+GGG | 0.679834 | 3.3:-17712842 | None:intergenic |
| ATTTAGGCTCGTAGACCAGG+TGG | 0.708141 | 3.3:+17715694 | MS.gene28223:intron |
| GCATGTATATCTGATCTCAG+GGG | 0.727166 | 3.3:+17712888 | MS.gene28223:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATATAAAAACTATAAT+CGG | + | chr3.3:17712172-17712191 | MS.gene28223:intron | 10.0% |
| !!! | TTTATATTTTTGAATTTCTT+TGG | + | chr3.3:17711127-17711146 | MS.gene28223:intron | 10.0% |
| !! | ATTAAAAAAGAGAATTTAAC+TGG | + | chr3.3:17712149-17712168 | MS.gene28223:intron | 15.0% |
| !! | TTAATTTCGAAAAAATAGAT+GGG | - | chr3.3:17714800-17714819 | None:intergenic | 15.0% |
| !!! | ATTATTTTTGTTTTTGTAGT+AGG | + | chr3.3:17715234-17715253 | MS.gene28223:intron | 15.0% |
| !!! | GATATATTTTCTTTAAATCA+TGG | + | chr3.3:17713153-17713172 | MS.gene28223:intron | 15.0% |
| !!! | TATTTGTTTTGAAATTAGAA+AGG | - | chr3.3:17714714-17714733 | None:intergenic | 15.0% |
| !!! | TTTAATTTCGAAAAAATAGA+TGG | - | chr3.3:17714801-17714820 | None:intergenic | 15.0% |
| !! | AAGATATAACTTAAACATGA+AGG | - | chr3.3:17712094-17712113 | None:intergenic | 20.0% |
| !! | ATAAGAATTATGTAAACCTT+TGG | - | chr3.3:17710349-17710368 | None:intergenic | 20.0% |
| !! | CAAAACAATGAAAATAAGTT+AGG | + | chr3.3:17713671-17713690 | MS.gene28223:intron | 20.0% |
| !! | TAATTTCGAAAAAATAGATG+GGG | - | chr3.3:17714799-17714818 | None:intergenic | 20.0% |
| !! | TACAAATTATTGTCAATTTG+TGG | + | chr3.3:17712309-17712328 | MS.gene28223:intron | 20.0% |
| !! | TACTATTACTAATATTGTAG+AGG | + | chr3.3:17714258-17714277 | MS.gene28223:intron | 20.0% |
| !! | TATATAATTCTAACCTTATC+TGG | - | chr3.3:17711880-17711899 | None:intergenic | 20.0% |
| !! | TCTACAATATTAGTAATAGT+AGG | - | chr3.3:17714259-17714278 | None:intergenic | 20.0% |
| !! | TTGAAAGGAAAAATAAACAT+TGG | - | chr3.3:17713715-17713734 | None:intergenic | 20.0% |
| !!! | AGCTGTAATGATTATTTTTT+TGG | + | chr3.3:17712942-17712961 | MS.gene28223:intron | 20.0% |
| !!! | GAATTTTAGGTAAAGTTTTT+TGG | + | chr3.3:17713770-17713789 | MS.gene28223:intron | 20.0% |
| !!! | TGGTTTTCAAATATTATTAG+TGG | - | chr3.3:17713186-17713205 | None:intergenic | 20.0% |
| !!! | TTCTACTCAATTAATTTTCT+AGG | - | chr3.3:17715315-17715334 | None:intergenic | 20.0% |
| !!! | TTTTACTTACTTTCAATCAA+TGG | + | chr3.3:17713283-17713302 | MS.gene28223:intron | 20.0% |
| ! | AAAAGCAATAAAACTAGCAA+AGG | - | chr3.3:17713108-17713127 | None:intergenic | 25.0% |
| ! | AAATACTAAACAAAATCAGC+CGG | - | chr3.3:17711316-17711335 | None:intergenic | 25.0% |
| ! | AAGACCTTATAAATTCATTG+GGG | + | chr3.3:17715800-17715819 | MS.gene28223:CDS | 25.0% |
| ! | AAGTATTCAAGTGTAATTCA+GGG | + | chr3.3:17714820-17714839 | MS.gene28223:intron | 25.0% |
| ! | ACAATAAAACTACAGAATAG+CGG | + | chr3.3:17712342-17712361 | MS.gene28223:intron | 25.0% |
| ! | ACTTGTGAAAATTGTTTGAA+AGG | - | chr3.3:17713730-17713749 | None:intergenic | 25.0% |
| ! | AGAAAATAAAGTACGTAGTT+GGG | - | chr3.3:17712725-17712744 | None:intergenic | 25.0% |
| ! | AGTCTAATCAAAAAGTTGTT+TGG | - | chr3.3:17715520-17715539 | None:intergenic | 25.0% |
| ! | AGTGATAACATATTGTGATT+TGG | + | chr3.3:17713131-17713150 | MS.gene28223:intron | 25.0% |
| ! | CAAGACCTTATAAATTCATT+GGG | + | chr3.3:17715799-17715818 | MS.gene28223:CDS | 25.0% |
| ! | GTTAGATTGTTCAATGAAAA+AGG | + | chr3.3:17711104-17711123 | MS.gene28223:intron | 25.0% |
| ! | TAATGCTATGTGTAAAAGAA+AGG | + | chr3.3:17711533-17711552 | MS.gene28223:intron | 25.0% |
| ! | TACTGTTATAGTAGAATCTA+GGG | - | chr3.3:17712621-17712640 | None:intergenic | 25.0% |
| ! | TCAAGACCTTATAAATTCAT+TGG | + | chr3.3:17715798-17715817 | MS.gene28223:CDS | 25.0% |
| ! | TTAATTTCAAACTTGCATAG+TGG | - | chr3.3:17713647-17713666 | None:intergenic | 25.0% |
| !! | AAAACCAGCTAAAATTTTAG+AGG | + | chr3.3:17712471-17712490 | MS.gene28223:intron | 25.0% |
| !! | AAAATGTCATTAGAAGTGTA+GGG | - | chr3.3:17712427-17712446 | None:intergenic | 25.0% |
| !! | AAACCAGCTAAAATTTTAGA+GGG | + | chr3.3:17712472-17712491 | MS.gene28223:intron | 25.0% |
| !! | AAAGTATTCAAGTGTAATTC+AGG | + | chr3.3:17714819-17714838 | MS.gene28223:intron | 25.0% |
| !! | ATCTTTCGATTTGTCAAATT+TGG | + | chr3.3:17710377-17710396 | MS.gene28223:intron | 25.0% |
| !! | GGTTTAAGATATATTTGGTT+TGG | + | chr3.3:17712020-17712039 | MS.gene28223:intron | 25.0% |
| !! | TAAAATGTCATTAGAAGTGT+AGG | - | chr3.3:17712428-17712447 | None:intergenic | 25.0% |
| !! | TGCTTGGTTTAAGATATATT+TGG | + | chr3.3:17712015-17712034 | MS.gene28223:intron | 25.0% |
| !! | TTTGAGGTAAGAAAATATCT+CGG | + | chr3.3:17714154-17714173 | MS.gene28223:intron | 25.0% |
| !!! | ATGTCATTTTGACTTATCTT+AGG | + | chr3.3:17715426-17715445 | MS.gene28223:intron | 25.0% |
| !!! | GTTTTGAAAATTAAACTCCA+AGG | + | chr3.3:17714221-17714240 | MS.gene28223:intron | 25.0% |
| !!! | TTGATTTTCATTTTTCACCA+TGG | + | chr3.3:17710660-17710679 | MS.gene28223:intron | 25.0% |
| AAAATATCTCGGATATCTTG+AGG | + | chr3.3:17714165-17714184 | MS.gene28223:intron | 30.0% | |
| AATCAAGACTCAAATATTGC+GGG | - | chr3.3:17714473-17714492 | None:intergenic | 30.0% | |
| AATTTCCAGTTGAATGCATA+AGG | - | chr3.3:17711953-17711972 | None:intergenic | 30.0% | |
| ACTGTACTAATAGTGTATTG+AGG | - | chr3.3:17713364-17713383 | None:intergenic | 30.0% | |
| AGAATAGAACTTTAGTGTAG+TGG | + | chr3.3:17711717-17711736 | MS.gene28223:intron | 30.0% | |
| AGAGTTAATCCAGAAACTAA+AGG | + | chr3.3:17712855-17712874 | MS.gene28223:CDS | 30.0% | |
| AGTATTCAAGTGTAATTCAG+GGG | + | chr3.3:17714821-17714840 | MS.gene28223:intron | 30.0% | |
| AGTTAAAAATTCCAGGATCA+TGG | + | chr3.3:17714091-17714110 | MS.gene28223:intron | 30.0% | |
| ATATTCCATGATATGCTACT+TGG | + | chr3.3:17712286-17712305 | MS.gene28223:intron | 30.0% | |
| ATCAACACCAAATCTCAAAA+AGG | + | chr3.3:17710200-17710219 | MS.gene28223:CDS | 30.0% | |
| ATTGAGTCCACATTCTAAAT+TGG | - | chr3.3:17713525-17713544 | None:intergenic | 30.0% | |
| ATTGCATGAATACGTGAAAT+CGG | + | chr3.3:17714990-17715009 | MS.gene28223:intron | 30.0% | |
| ATTTCCAGTTGAATGCATAA+GGG | - | chr3.3:17711952-17711971 | None:intergenic | 30.0% | |
| CAAAAAGTTGTTTGGTTAGT+TGG | - | chr3.3:17715512-17715531 | None:intergenic | 30.0% | |
| CAATCAAGACTCAAATATTG+CGG | - | chr3.3:17714474-17714493 | None:intergenic | 30.0% | |
| CTACTGTTATAGTAGAATCT+AGG | - | chr3.3:17712622-17712641 | None:intergenic | 30.0% | |
| GAATGCACAAATATGAAAAC+AGG | - | chr3.3:17715488-17715507 | None:intergenic | 30.0% | |
| GAATTATGTAAACCTTTGGA+AGG | - | chr3.3:17710345-17710364 | None:intergenic | 30.0% | |
| GAGAAAATAAAGTACGTAGT+TGG | - | chr3.3:17712726-17712745 | None:intergenic | 30.0% | |
| GGTCTAACAAAAATATAACC+TGG | - | chr3.3:17712655-17712674 | None:intergenic | 30.0% | |
| GTTAAAAATTCCAGGATCAT+GGG | + | chr3.3:17714092-17714111 | MS.gene28223:intron | 30.0% | |
| GTTATTCAAGAAAACCTAAG+TGG | - | chr3.3:17715636-17715655 | None:intergenic | 30.0% | |
| TAAGAATGACACAGCAAATT+AGG | - | chr3.3:17715612-17715631 | None:intergenic | 30.0% | |
| TACAGTGTGTTATCAAATAG+AGG | + | chr3.3:17713378-17713397 | MS.gene28223:intron | 30.0% | |
| TATGATTCTCCTTAATATGC+AGG | + | chr3.3:17712815-17712834 | MS.gene28223:intron | 30.0% | |
| TCAACACCAAATCTCAAAAA+GGG | + | chr3.3:17710201-17710220 | MS.gene28223:CDS | 30.0% | |
| TCTCAAATTATTAGCAGTGT+CGG | - | chr3.3:17710476-17710495 | None:intergenic | 30.0% | |
| TCTCACATCTTAAACATGAA+TGG | - | chr3.3:17715123-17715142 | None:intergenic | 30.0% | |
| TGTAAATTCCTGTACAAGTA+TGG | - | chr3.3:17714653-17714672 | None:intergenic | 30.0% | |
| TGTTATCAAATAGAGGCTAT+TGG | + | chr3.3:17713385-17713404 | MS.gene28223:intron | 30.0% | |
| TTCAATCAATGGTCAAATAG+CGG | + | chr3.3:17713294-17713313 | MS.gene28223:intron | 30.0% | |
| TTCGTCAAATGATCAATGTA+TGG | + | chr3.3:17712914-17712933 | MS.gene28223:intron | 30.0% | |
| ! | AGCAACTTTTCTACCAAATA+AGG | - | chr3.3:17714745-17714764 | None:intergenic | 30.0% |
| ! | CAACAATTTAAGATCACTGT+CGG | - | chr3.3:17715551-17715570 | None:intergenic | 30.0% |
| ! | GAAGTTTTCTCCTTTGATTA+TGG | + | chr3.3:17710269-17710288 | MS.gene28223:CDS | 30.0% |
| ! | GCAACTTTTCTACCAAATAA+GGG | - | chr3.3:17714744-17714763 | None:intergenic | 30.0% |
| ! | GCTACGACATTAAGAATTTT+AGG | + | chr3.3:17713757-17713776 | MS.gene28223:intron | 30.0% |
| ! | TACAAAGCATTAACTATGGT+CGG | + | chr3.3:17714115-17714134 | MS.gene28223:CDS | 30.0% |
| ! | TTGAATTTTCACAGAGCAAT+GGG | + | chr3.3:17711179-17711198 | MS.gene28223:intron | 30.0% |
| ! | TTGAGAATTTTCTTCAGCAA+AGG | + | chr3.3:17711270-17711289 | MS.gene28223:CDS | 30.0% |
| !! | AACCAGCTAAAATTTTAGAG+GGG | + | chr3.3:17712473-17712492 | MS.gene28223:intron | 30.0% |
| !! | AGATTTGGTGTTGATTCAAA+CGG | - | chr3.3:17710195-17710214 | None:intergenic | 30.0% |
| !! | ATTTTCATTTTTCACCATGG+TGG | + | chr3.3:17710663-17710682 | MS.gene28223:intron | 30.0% |
| !! | CTTACCTCAGATTTTTAACT+TGG | + | chr3.3:17711473-17711492 | MS.gene28223:intron | 30.0% |
| !! | TAGTGGATTAGAGGTTATAT+CGG | + | chr3.3:17714350-17714369 | MS.gene28223:intron | 30.0% |
| !! | TGTTATTGACTTCCATGTTA+AGG | + | chr3.3:17710909-17710928 | MS.gene28223:intron | 30.0% |
| !! | TTTGCCAATCAACTACTTTT+TGG | + | chr3.3:17713921-17713940 | MS.gene28223:CDS | 30.0% |
| !! | TTTTCATTTTTCACCATGGT+GGG | + | chr3.3:17710664-17710683 | MS.gene28223:intron | 30.0% |
| !!! | ATGCTTTTTTCTGCACATTT+AGG | + | chr3.3:17715678-17715697 | MS.gene28223:intron | 30.0% |
| AAATACCGATCACCCTTATT+TGG | + | chr3.3:17714729-17714748 | MS.gene28223:intron | 35.0% | |
| AACCAAGTCTCAGACATAAA+AGG | - | chr3.3:17715150-17715169 | None:intergenic | 35.0% | |
| AAGCATGTATATCTGATCTC+AGG | + | chr3.3:17712886-17712905 | MS.gene28223:CDS | 35.0% | |
| AATGCAGATGAATCCAGATA+AGG | + | chr3.3:17711864-17711883 | MS.gene28223:intron | 35.0% | |
| ACAATGCAGCATTTCTTCTT+AGG | - | chr3.3:17712049-17712068 | None:intergenic | 35.0% | |
| ACCAAATAAGCATTAGGAAG+GGG | - | chr3.3:17711988-17712007 | None:intergenic | 35.0% | |
| ACCATCATTCAACCTTAACA+TGG | - | chr3.3:17710924-17710943 | None:intergenic | 35.0% | |
| ACGAAAATGAGCATACTTCA+AGG | + | chr3.3:17713970-17713989 | MS.gene28223:CDS | 35.0% | |
| ACTATAGTGCTATAGCATTG+CGG | + | chr3.3:17711640-17711659 | MS.gene28223:intron | 35.0% | |
| ACTGTTGGAAATTCACAAGT+TGG | + | chr3.3:17710300-17710319 | MS.gene28223:CDS | 35.0% | |
| AGCACTATAGTGCACAAAAT+TGG | + | chr3.3:17713321-17713340 | MS.gene28223:intron | 35.0% | |
| AGCATAGCAAATGAACATGT+CGG | - | chr3.3:17715722-17715741 | None:intergenic | 35.0% | |
| AGCATGTATATCTGATCTCA+GGG | + | chr3.3:17712887-17712906 | MS.gene28223:CDS | 35.0% | |
| AGCTGACAGTTAAAAATTCC+AGG | + | chr3.3:17714084-17714103 | MS.gene28223:intron | 35.0% | |
| AGGTGTCTTTGACAAAATAG+AGG | + | chr3.3:17714844-17714863 | MS.gene28223:intron | 35.0% | |
| ATCCAGAAACTAAAGGCTAA+CGG | + | chr3.3:17712862-17712881 | MS.gene28223:CDS | 35.0% | |
| ATTTAGTGACGAATTCAGAG+AGG | + | chr3.3:17713055-17713074 | MS.gene28223:intron | 35.0% | |
| CAAGTGACCAAATAAGCATT+AGG | - | chr3.3:17711994-17712013 | None:intergenic | 35.0% | |
| CACCTCCTATATAGTCATAT+AGG | + | chr3.3:17714376-17714395 | MS.gene28223:intron | 35.0% | |
| CTAGCAAAGGAAATTAAGAG+AGG | - | chr3.3:17713095-17713114 | None:intergenic | 35.0% | |
| CTCGTCAATTCAGACATATT+TGG | + | chr3.3:17712783-17712802 | MS.gene28223:intron | 35.0% | |
| GACCAAATAAGCATTAGGAA+GGG | - | chr3.3:17711989-17712008 | None:intergenic | 35.0% | |
| GCTTCCAAAAAGTAGTTGAT+TGG | - | chr3.3:17713928-17713947 | None:intergenic | 35.0% | |
| GGTACGTTTGGATTTCAAAT+TGG | + | chr3.3:17710222-17710241 | MS.gene28223:CDS | 35.0% | |
| GTAGCAGTATTGTCAAATAG+CGG | + | chr3.3:17711616-17711635 | MS.gene28223:intron | 35.0% | |
| GTAGTAGGATCCTATTATCT+CGG | + | chr3.3:17715249-17715268 | MS.gene28223:intron | 35.0% | |
| GTCCACATTCTAAATTGGAA+TGG | - | chr3.3:17713520-17713539 | None:intergenic | 35.0% | |
| GTTTGGATTTCAAATTGGAG+TGG | + | chr3.3:17710227-17710246 | MS.gene28223:CDS | 35.0% | |
| TAAAACCATTGACACGAACT+GGG | - | chr3.3:17710152-17710171 | None:intergenic | 35.0% | |
| TAAATCGCAACCGAGATAAT+AGG | - | chr3.3:17715262-17715281 | None:intergenic | 35.0% | |
| TAATACCTGAGCATGAGATA+CGG | - | chr3.3:17714435-17714454 | None:intergenic | 35.0% | |
| TACAAGAGCTGTTTATGACT+AGG | + | chr3.3:17714519-17714538 | MS.gene28223:intron | 35.0% | |
| TATTTGAGTCTTGATTGCTC+TGG | + | chr3.3:17714477-17714496 | MS.gene28223:intron | 35.0% | |
| TCAATGTAGCTTCATGACTT+AGG | + | chr3.3:17711379-17711398 | MS.gene28223:intron | 35.0% | |
| TCATACATGCATGGAAAACT+CGG | - | chr3.3:17711827-17711846 | None:intergenic | 35.0% | |
| TCCATGTTAAGGTTGAATGA+TGG | + | chr3.3:17710920-17710939 | MS.gene28223:intron | 35.0% | |
| TCTGCCAAGTTAAAAATCTG+AGG | - | chr3.3:17711480-17711499 | None:intergenic | 35.0% | |
| TGACCAAATAAGCATTAGGA+AGG | - | chr3.3:17711990-17712009 | None:intergenic | 35.0% | |
| TGCAAGTCTATAGTACTAGT+AGG | - | chr3.3:17712584-17712603 | None:intergenic | 35.0% | |
| TTATTTGGTCACTTGATGCT+TGG | + | chr3.3:17711999-17712018 | MS.gene28223:intron | 35.0% | |
| TTCTACCAAATAAGGGTGAT+CGG | - | chr3.3:17714737-17714756 | None:intergenic | 35.0% | |
| TTGGCAAAAATGTTCTCTTG+TGG | - | chr3.3:17713909-17713928 | None:intergenic | 35.0% | |
| TTGTACATTGCTTACCTAGA+AGG | + | chr3.3:17713569-17713588 | MS.gene28223:intron | 35.0% | |
| TTGTACCAAGTAGCATATCA+TGG | - | chr3.3:17712294-17712313 | None:intergenic | 35.0% | |
| ! | AAAATCTGAGGTAAGAGCAA+TGG | - | chr3.3:17711468-17711487 | None:intergenic | 35.0% |
| ! | AAATCTGAGGTAAGAGCAAT+GGG | - | chr3.3:17711467-17711486 | None:intergenic | 35.0% |
| ! | AATCTCAAAAAGGGTACGTT+TGG | + | chr3.3:17710210-17710229 | MS.gene28223:CDS | 35.0% |
| ! | ACGTATTCATGCAATTTTGC+AGG | - | chr3.3:17714985-17715004 | None:intergenic | 35.0% |
| ! | AGGAGTGTGATTTATAGCTT+TGG | - | chr3.3:17712074-17712093 | None:intergenic | 35.0% |
| ! | ATGGAAGCTTTGATCAGTTA+TGG | + | chr3.3:17710120-17710139 | MS.gene28223:CDS | 35.0% |
| ! | CGTATTCATGCAATTTTGCA+GGG | - | chr3.3:17714984-17715003 | None:intergenic | 35.0% |
| ! | CTCCATTCCAATTTAGAATG+TGG | + | chr3.3:17713515-17713534 | MS.gene28223:intron | 35.0% |
| ! | GTTGAATTTTCACAGAGCAA+TGG | + | chr3.3:17711178-17711197 | MS.gene28223:intron | 35.0% |
| ! | TAAAGTACGTAGTTGGGTTT+TGG | - | chr3.3:17712719-17712738 | None:intergenic | 35.0% |
| ! | TGAATTTTCACGAGTCTGTT+CGG | - | chr3.3:17714895-17714914 | None:intergenic | 35.0% |
| ! | TGGAAGCTTTGATCAGTTAT+GGG | + | chr3.3:17710121-17710140 | MS.gene28223:CDS | 35.0% |
| ! | TGGGTACAAAGCATTAACTA+TGG | + | chr3.3:17714111-17714130 | MS.gene28223:CDS | 35.0% |
| ! | TTTTTGTCTCGTCAGAGTTT+TGG | - | chr3.3:17712680-17712699 | None:intergenic | 35.0% |
| !! | AACATTGATTTCCACCTTCT+AGG | - | chr3.3:17713586-17713605 | None:intergenic | 35.0% |
| !! | AGTTGGTCATTTTGAGAACA+CGG | + | chr3.3:17710317-17710336 | MS.gene28223:CDS | 35.0% |
| !! | ATTCTCAAGTTGAGACATAG+AGG | - | chr3.3:17711258-17711277 | None:intergenic | 35.0% |
| !! | CATGCTTAAGCTTTGTTACT+AGG | + | chr3.3:17715065-17715084 | MS.gene28223:intron | 35.0% |
| !! | TTCTCAAGTTGAGACATAGA+GGG | - | chr3.3:17711257-17711276 | None:intergenic | 35.0% |
| !!! | AACCCCTCTAAAATTTTAGC+TGG | - | chr3.3:17712478-17712497 | None:intergenic | 35.0% |
| !!! | AACGTACCCTTTTTGAGATT+TGG | - | chr3.3:17710210-17710229 | None:intergenic | 35.0% |
| !!! | AGAGGGGTTTTTTGATTCAA+CGG | + | chr3.3:17712489-17712508 | MS.gene28223:intron | 35.0% |
| !!! | GATGGTGTTGTGTTTTGTTT+TGG | + | chr3.3:17710938-17710957 | MS.gene28223:intron | 35.0% |
| AAAGAGTTTAGTCACTCTCC+CGG | + | chr3.3:17711904-17711923 | MS.gene28223:intron | 40.0% | |
| AAGCTCTTGCCATTGCTAAA+AGG | + | chr3.3:17711572-17711591 | MS.gene28223:intron | 40.0% | |
| AATGAGCATACTTCAAGGAG+CGG | + | chr3.3:17713975-17713994 | MS.gene28223:CDS | 40.0% | |
| ACTTTCAAAAACACCCACCA+TGG | - | chr3.3:17710680-17710699 | None:intergenic | 40.0% | |
| AGAGCTGTTTATGACTAGGA+AGG | + | chr3.3:17714523-17714542 | MS.gene28223:intron | 40.0% | |
| AGATCTTGCATCAAACCGAA+AGG | - | chr3.3:17715384-17715403 | None:intergenic | 40.0% | |
| AGCTCTTGCCATTGCTAAAA+GGG | + | chr3.3:17711573-17711592 | MS.gene28223:intron | 40.0% | |
| ATCTTGCATCAAACCGAAAG+GGG | - | chr3.3:17715382-17715401 | None:intergenic | 40.0% | |
| ATGAGCACATCATACATGCA+TGG | - | chr3.3:17711836-17711855 | None:intergenic | 40.0% | |
| ATGTCTGAATTGACGAGTTC+AGG | - | chr3.3:17712780-17712799 | None:intergenic | 40.0% | |
| ATTCAAGTGTAATTCAGGGG+AGG | + | chr3.3:17714824-17714843 | MS.gene28223:intron | 40.0% | |
| CATGTATATCTGATCTCAGG+GGG | + | chr3.3:17712889-17712908 | MS.gene28223:CDS | 40.0% | |
| CCAGGCCTATATGACTATAT+AGG | - | chr3.3:17714384-17714403 | None:intergenic | 40.0% | |
| CCTATATAGTCATATAGGCC+TGG | + | chr3.3:17714381-17714400 | MS.gene28223:intron | 40.0% | |
| CCTGTACAAGTATGGACTTT+GGG | - | chr3.3:17714645-17714664 | None:intergenic | 40.0% | |
| CTCTTCATACACGTGTTAGA+AGG | - | chr3.3:17714611-17714630 | None:intergenic | 40.0% | |
| GAGCAGTGTTGTAGATTTGT+AGG | + | chr3.3:17711778-17711797 | MS.gene28223:intron | 40.0% | |
| GATCTTGCATCAAACCGAAA+GGG | - | chr3.3:17715383-17715402 | None:intergenic | 40.0% | |
| GATTAACTCTTCAATGCCAG+GGG | - | chr3.3:17712845-17712864 | None:intergenic | 40.0% | |
| GCATGTATATCTGATCTCAG+GGG | + | chr3.3:17712888-17712907 | MS.gene28223:CDS | 40.0% | |
| GGATTAACTCTTCAATGCCA+GGG | - | chr3.3:17712846-17712865 | None:intergenic | 40.0% | |
| GGCCTATATGACTATATAGG+AGG | - | chr3.3:17714381-17714400 | None:intergenic | 40.0% | |
| GTAAAACCATTGACACGAAC+TGG | - | chr3.3:17710153-17710172 | None:intergenic | 40.0% | |
| GTCAAAATGACATACGACCA+AGG | - | chr3.3:17715419-17715438 | None:intergenic | 40.0% | |
| GTGAGTGACTTGATGAACAT+AGG | + | chr3.3:17713545-17713564 | MS.gene28223:intron | 40.0% | |
| TACATTGCTTACCTAGAAGG+TGG | + | chr3.3:17713572-17713591 | MS.gene28223:intron | 40.0% | |
| TATTCACGATCTGGATCAGT+AGG | - | chr3.3:17714940-17714959 | None:intergenic | 40.0% | |
| TCCCCTTCCTAATGCTTATT+TGG | + | chr3.3:17711984-17712003 | MS.gene28223:intron | 40.0% | |
| TCCTGTACAAGTATGGACTT+TGG | - | chr3.3:17714646-17714665 | None:intergenic | 40.0% | |
| TCGGTAAGTTGTTACTAGTG+TGG | + | chr3.3:17712191-17712210 | MS.gene28223:intron | 40.0% | |
| TGACAGGTTCTATATATGCC+AGG | - | chr3.3:17713220-17713239 | None:intergenic | 40.0% | |
| TGACGAGTTCAGGATACAAT+TGG | - | chr3.3:17712770-17712789 | None:intergenic | 40.0% | |
| TGAGTAGAATGCTTCGATCT+TGG | + | chr3.3:17715326-17715345 | MS.gene28223:intron | 40.0% | |
| TGCAGTCGAACAAATCAAGA+AGG | + | chr3.3:17714010-17714029 | MS.gene28223:CDS | 40.0% | |
| TGGATTAACTCTTCAATGCC+AGG | - | chr3.3:17712847-17712866 | None:intergenic | 40.0% | |
| TGTCAACATAACAAGTACGC+AGG | + | chr3.3:17713235-17713254 | MS.gene28223:intron | 40.0% | |
| ! | AATCTGAGGTAAGAGCAATG+GGG | - | chr3.3:17711466-17711485 | None:intergenic | 40.0% |
| ! | AATTTTCACAGAGCAATGGG+TGG | + | chr3.3:17711182-17711201 | MS.gene28223:intron | 40.0% |
| ! | AGATCCAACCCTTTTAGCAA+TGG | - | chr3.3:17711584-17711603 | None:intergenic | 40.0% |
| ! | ATGATCTTGCTATCCCCTTT+CGG | + | chr3.3:17715366-17715385 | MS.gene28223:intron | 40.0% |
| ! | CAGGGATTTTACTCAACTCA+GGG | - | chr3.3:17714966-17714985 | None:intergenic | 40.0% |
| ! | GAATTTTCACGAGTCTGTTC+GGG | - | chr3.3:17714894-17714913 | None:intergenic | 40.0% |
| ! | GGAGCATTTCACTTTCGATT+TGG | + | chr3.3:17711400-17711419 | MS.gene28223:intron | 40.0% |
| ! | TGTGTCATTCTTAGCCACTT+AGG | + | chr3.3:17715619-17715638 | MS.gene28223:intron | 40.0% |
| !! | AACAGTAGCTTTATTGAGCC+AGG | + | chr3.3:17712634-17712653 | MS.gene28223:intron | 40.0% |
| !! | ATTCTGGAGCTATGGAAGAA+TGG | + | chr3.3:17710973-17710992 | MS.gene28223:CDS | 40.0% |
| !! | GACATGTTCATTTGCTATGC+TGG | + | chr3.3:17715721-17715740 | MS.gene28223:CDS | 40.0% |
| !! | GATCTCGATTTTGACAACCT+TGG | + | chr3.3:17715399-17715418 | MS.gene28223:intron | 40.0% |
| !! | GGTTAGATATTCTGGAGCTA+TGG | + | chr3.3:17710965-17710984 | MS.gene28223:intron | 40.0% |
| !! | TAGCTGCTAACTTTGAAGCA+CGG | + | chr3.3:17710441-17710460 | MS.gene28223:intron | 40.0% |
| !! | TGCCTTTTATGTCTGAGACT+TGG | + | chr3.3:17715145-17715164 | MS.gene28223:intron | 40.0% |
| !! | TGCGTACTTGTTATGTTGAC+AGG | - | chr3.3:17713236-17713255 | None:intergenic | 40.0% |
| !! | TTGGTGCTGGTTAGATATTC+TGG | + | chr3.3:17710957-17710976 | MS.gene28223:intron | 40.0% |
| !! | TTTAACTTGGCAGAGCTGAA+AGG | + | chr3.3:17711486-17711505 | MS.gene28223:intron | 40.0% |
| !!! | ACGAGCTTGCTGAATTTTGT+GGG | + | chr3.3:17711049-17711068 | MS.gene28223:CDS | 40.0% |
| !!! | CAACTACTTTTTGGAAGCTC+TGG | + | chr3.3:17713930-17713949 | MS.gene28223:CDS | 40.0% |
| !!! | GTTGTGTTTTGTTTTGGTGC+TGG | + | chr3.3:17710944-17710963 | MS.gene28223:intron | 40.0% |
| AAAACCAGTACACGATGTCC+TGG | + | chr3.3:17713199-17713218 | MS.gene28223:intron | 45.0% | |
| AAGTTACGTTTGGAGAGACC+GGG | - | chr3.3:17711925-17711944 | None:intergenic | 45.0% | |
| AATTCCTTCATCCAGGCACA+CGG | - | chr3.3:17711028-17711047 | None:intergenic | 45.0% | |
| ACTAGTAGGCTGCCTTACTA+GGG | - | chr3.3:17712570-17712589 | None:intergenic | 45.0% | |
| AGCATGAAAGACTCAAAGCC+AGG | - | chr3.3:17715051-17715070 | None:intergenic | 45.0% | |
| AGCCGGTCTCAATCTTACTT+TGG | - | chr3.3:17711299-17711318 | None:intergenic | 45.0% | |
| AGGGGAAAGCCTGCATATTA+AGG | - | chr3.3:17712827-17712846 | None:intergenic | 45.0% | |
| ATCAACCCAGTTCGTGTCAA+TGG | + | chr3.3:17710144-17710163 | MS.gene28223:CDS | 45.0% | |
| ATGCTTTGTACCCATGATCC+TGG | - | chr3.3:17714105-17714124 | None:intergenic | 45.0% | |
| ATTATGGCTGCTGCTACTGT+TGG | + | chr3.3:17710285-17710304 | MS.gene28223:CDS | 45.0% | |
| CAAAGATAACCTAGCAGCCA+AGG | - | chr3.3:17711228-17711247 | None:intergenic | 45.0% | |
| CAAGTTACGTTTGGAGAGAC+CGG | - | chr3.3:17711926-17711945 | None:intergenic | 45.0% | |
| CAGGAAAAGCTGTTGCAGAA+TGG | + | chr3.3:17711073-17711092 | MS.gene28223:CDS | 45.0% | |
| CATGCATGGAAAACTCGGTT+TGG | - | chr3.3:17711822-17711841 | None:intergenic | 45.0% | |
| CCAGGATGGTTAGAATCGTA+TGG | - | chr3.3:17715033-17715052 | None:intergenic | 45.0% | |
| CCATACGATTCTAACCATCC+TGG | + | chr3.3:17715030-17715049 | MS.gene28223:intron | 45.0% | |
| CCCAAAGTCCATACTTGTAC+AGG | + | chr3.3:17714642-17714661 | MS.gene28223:intron | 45.0% | |
| CGCCAAAGTAAGATTGAGAC+CGG | + | chr3.3:17711294-17711313 | MS.gene28223:intron | 45.0% | |
| CGGTCTCAATCTTACTTTGG+CGG | - | chr3.3:17711296-17711315 | None:intergenic | 45.0% | |
| CGTGAAATCGGCATGAAATC+TGG | + | chr3.3:17715002-17715021 | MS.gene28223:intron | 45.0% | |
| CTGTTGCTGCAAAAGCTGAT+TGG | + | chr3.3:17715761-17715780 | MS.gene28223:CDS | 45.0% | |
| CTTGCCATTGCTAAAAGGGT+TGG | + | chr3.3:17711577-17711596 | MS.gene28223:intron | 45.0% | |
| GACAGGCTTCATAAGAAGTG+TGG | - | chr3.3:17713868-17713887 | None:intergenic | 45.0% | |
| GCATGACTAAGAGGTCACAT+AGG | + | chr3.3:17712525-17712544 | MS.gene28223:intron | 45.0% | |
| GCATTAACTATGGTCGGAGA+TGG | + | chr3.3:17714121-17714140 | MS.gene28223:CDS | 45.0% | |
| GCTATAGCACTCTAGTGTAG+CGG | + | chr3.3:17713411-17713430 | MS.gene28223:intron | 45.0% | |
| GTAGCAGCAGCCATAATCAA+AGG | - | chr3.3:17710282-17710301 | None:intergenic | 45.0% | |
| GTTGCTACTGCATGACTAAG+AGG | + | chr3.3:17712516-17712535 | MS.gene28223:intron | 45.0% | |
| TAAGGGCTGCAAGTTACGTT+TGG | - | chr3.3:17711935-17711954 | None:intergenic | 45.0% | |
| TACTAGTAGGCTGCCTTACT+AGG | - | chr3.3:17712571-17712590 | None:intergenic | 45.0% | |
| TCAGGGTTCTATTCACGATC+TGG | - | chr3.3:17714949-17714968 | None:intergenic | 45.0% | |
| TCCTCGAATTACAAGTGTCC+CGG | - | chr3.3:17710589-17710608 | None:intergenic | 45.0% | |
| TGAAAGACTCAAAGCCAGGA+TGG | - | chr3.3:17715047-17715066 | None:intergenic | 45.0% | |
| TGATGCAGTGTGCTTTGATG+TGG | + | chr3.3:17710996-17711015 | MS.gene28223:CDS | 45.0% | |
| TGTTCCTGCTAGAAGTTGCA+GGG | + | chr3.3:17714284-17714303 | MS.gene28223:intron | 45.0% | |
| TGTTGACAATCGTAGATCGC+AGG | - | chr3.3:17712389-17712408 | None:intergenic | 45.0% | |
| TTAATATGCAGGCTTTCCCC+TGG | + | chr3.3:17712826-17712845 | MS.gene28223:intron | 45.0% | |
| TTATGACTAGGAAGGCTGCT+GGG | + | chr3.3:17714531-17714550 | MS.gene28223:intron | 45.0% | |
| TTTATGACTAGGAAGGCTGC+TGG | + | chr3.3:17714530-17714549 | MS.gene28223:intron | 45.0% | |
| ! | AGTTGCAGGGGTAGTTTTCT+AGG | + | chr3.3:17714297-17714316 | MS.gene28223:intron | 45.0% |
| ! | ATCTGAGGTAAGAGCAATGG+GGG | - | chr3.3:17711465-17711484 | None:intergenic | 45.0% |
| ! | GCAGGGATTTTACTCAACTC+AGG | - | chr3.3:17714967-17714986 | None:intergenic | 45.0% |
| !! | AGAGGTGGATAGTGGATTAG+AGG | + | chr3.3:17714341-17714360 | MS.gene28223:intron | 45.0% |
| !! | AGATGGCGCAACTGATTTTG+AGG | + | chr3.3:17714138-17714157 | MS.gene28223:CDS | 45.0% |
| !! | CTTGATTTGTTCGACTGCAG+TGG | - | chr3.3:17714009-17714028 | None:intergenic | 45.0% |
| !! | GGTCACATAGGTTTGAGTTG+CGG | + | chr3.3:17712537-17712556 | MS.gene28223:intron | 45.0% |
| !! | TGCCGTTAGCCTTTAGTTTC+TGG | - | chr3.3:17712867-17712886 | None:intergenic | 45.0% |
| !! | TGTTCCTTTTGAGGAAGCCT+TGG | + | chr3.3:17711208-17711227 | MS.gene28223:CDS | 45.0% |
| !!! | CGAGCTTGCTGAATTTTGTG+GGG | + | chr3.3:17711050-17711069 | MS.gene28223:CDS | 45.0% |
| !!! | GACGAGCTTGCTGAATTTTG+TGG | + | chr3.3:17711048-17711067 | MS.gene28223:CDS | 45.0% |
| AAGCCTGTCGCGTCAATACT+TGG | + | chr3.3:17713879-17713898 | MS.gene28223:intron | 50.0% | |
| AAGTGCAGAGAGGTGGATAG+TGG | + | chr3.3:17714333-17714352 | MS.gene28223:intron | 50.0% | |
| ACCGGGACACTTGTAATTCG+AGG | + | chr3.3:17710585-17710604 | MS.gene28223:intron | 50.0% | |
| AGCCTGTCGCGTCAATACTT+GGG | + | chr3.3:17713880-17713899 | MS.gene28223:intron | 50.0% | |
| ATATTGCGGGATCAACCGTG+TGG | - | chr3.3:17714460-17714479 | None:intergenic | 50.0% | |
| ATGGACTTTGGGCCATGACT+CGG | - | chr3.3:17714634-17714653 | None:intergenic | 50.0% | |
| ATTTAGGCTCGTAGACCAGG+TGG | + | chr3.3:17715694-17715713 | MS.gene28223:intron | 50.0% | |
| CACATTTAGGCTCGTAGACC+AGG | + | chr3.3:17715691-17715710 | MS.gene28223:intron | 50.0% | |
| CAGGTCAGGTGGTTCAGTTT+CGG | + | chr3.3:17714584-17714603 | MS.gene28223:intron | 50.0% | |
| CTTGCATAGTGGCAAACGAG+AGG | - | chr3.3:17713636-17713655 | None:intergenic | 50.0% | |
| GAGAACACGGTTCCTTCCAA+AGG | + | chr3.3:17710330-17710349 | MS.gene28223:CDS | 50.0% | |
| GCAGCCCTTATGCATTCAAC+TGG | + | chr3.3:17711945-17711964 | MS.gene28223:intron | 50.0% | |
| GCTCGTCAATTCCTTCATCC+AGG | - | chr3.3:17711035-17711054 | None:intergenic | 50.0% | |
| GTAGGTGCTTCAGTAAGCCT+TGG | - | chr3.3:17714241-17714260 | None:intergenic | 50.0% | |
| GTGTATGAAGAGCCGAGTCA+TGG | + | chr3.3:17714619-17714638 | MS.gene28223:intron | 50.0% | |
| GTGTTCCTGCTAGAAGTTGC+AGG | + | chr3.3:17714283-17714302 | MS.gene28223:intron | 50.0% | |
| GTTCCTGCTAGAAGTTGCAG+GGG | + | chr3.3:17714285-17714304 | MS.gene28223:intron | 50.0% | |
| TATGCCAGGACATCGTGTAC+TGG | - | chr3.3:17713206-17713225 | None:intergenic | 50.0% | |
| TATTGCGGGATCAACCGTGT+GGG | - | chr3.3:17714459-17714478 | None:intergenic | 50.0% | |
| TGCGGATTCAGTCCCTAGTA+AGG | + | chr3.3:17712555-17712574 | MS.gene28223:intron | 50.0% | |
| TGCTCAGGTATTAGCCCACA+CGG | + | chr3.3:17714442-17714461 | MS.gene28223:intron | 50.0% | |
| TGTACGAGTCATCGCTGTCT+CGG | - | chr3.3:17714503-17714522 | None:intergenic | 50.0% | |
| ! | CTTGCTGAATTTTGTGGGGC+AGG | + | chr3.3:17711054-17711073 | MS.gene28223:CDS | 50.0% |
| ! | TAGGCCTGGTTAGCTCCATT+AGG | + | chr3.3:17714395-17714414 | MS.gene28223:intron | 50.0% |
| !! | ATCCCAAGTATTGACGCGAC+AGG | - | chr3.3:17713885-17713904 | None:intergenic | 50.0% |
| !! | CTGTTGCAGAATGGACTGCA+AGG | + | chr3.3:17711082-17711101 | MS.gene28223:CDS | 50.0% |
| !! | GGAAGCTCTGGACAGTTTCT+GGG | + | chr3.3:17713942-17713961 | MS.gene28223:CDS | 50.0% |
| !! | GGGTGGTTCTGTTCCTTTTG+AGG | + | chr3.3:17711199-17711218 | MS.gene28223:CDS | 50.0% |
| !! | TGGAAGCTCTGGACAGTTTC+TGG | + | chr3.3:17713941-17713960 | MS.gene28223:CDS | 50.0% |
| !! | TGTCTCGTCAGAGTTTTGGC+TGG | - | chr3.3:17712676-17712695 | None:intergenic | 50.0% |
| ACCTCTCTGCACTTGAGAGC+GGG | - | chr3.3:17714327-17714346 | None:intergenic | 55.0% | |
| ACTATAGCGCTCAAGCGCAG+TGG | + | chr3.3:17712246-17712265 | MS.gene28223:intron | 55.0% | |
| AGCACGTTATGCTCGGATGC+AGG | + | chr3.3:17714565-17714584 | MS.gene28223:intron | 55.0% | |
| ATGAACATGTCGGCACCACC+TGG | - | chr3.3:17715712-17715731 | None:intergenic | 55.0% | |
| CACCTCTCTGCACTTGAGAG+CGG | - | chr3.3:17714328-17714347 | None:intergenic | 55.0% | |
| CTACCCCTGCAACTTCTAGC+AGG | - | chr3.3:17714291-17714310 | None:intergenic | 55.0% | |
| GAGCATACTTCAAGGAGCGG+AGG | + | chr3.3:17713978-17713997 | MS.gene28223:CDS | 55.0% | |
| GCAGCCAAGGCTTCCTCAAA+AGG | - | chr3.3:17711215-17711234 | None:intergenic | 55.0% | |
| GGTAAGAGCAATGGGGGAGT+AGG | - | chr3.3:17711459-17711478 | None:intergenic | 55.0% | |
| GGTAGCGAGCACGTTATGCT+CGG | + | chr3.3:17714558-17714577 | MS.gene28223:intron | 55.0% | |
| GTGTCGTGTCAGTGTCGTGT+CGG | + | chr3.3:17710536-17710555 | MS.gene28223:intron | 55.0% | |
| GTTATGCTCGGATGCAGGTC+AGG | + | chr3.3:17714570-17714589 | MS.gene28223:intron | 55.0% | |
| TTGAGGAAGCCTTGGCTGCT+AGG | + | chr3.3:17711216-17711235 | MS.gene28223:CDS | 55.0% | |
| ! | TGTCAGTGTCGTGTCGGTGT+CGG | + | chr3.3:17710542-17710561 | MS.gene28223:intron | 55.0% |
| ACCCGCTCTCAAGTGCAGAG+AGG | + | chr3.3:17714323-17714342 | MS.gene28223:intron | 60.0% | |
| ACTGACGCGTGTTCGACACC+GGG | + | chr3.3:17710568-17710587 | MS.gene28223:intron | 60.0% | |
| AGCACCGTGTGCCTGGATGA+AGG | + | chr3.3:17711021-17711040 | MS.gene28223:CDS | 60.0% | |
| ATGCTCGGATGCAGGTCAGG+TGG | + | chr3.3:17714573-17714592 | MS.gene28223:intron | 60.0% | |
| CACTGACGCGTGTTCGACAC+CGG | + | chr3.3:17710567-17710586 | MS.gene28223:intron | 60.0% | |
| CGCTCTCAAGTGCAGAGAGG+TGG | + | chr3.3:17714326-17714345 | MS.gene28223:intron | 60.0% | |
| CTAGGAAGGCTGCTGGGACT+TGG | + | chr3.3:17714537-17714556 | MS.gene28223:intron | 60.0% | |
| GTGGGCCGTATCTCATGCTC+AGG | + | chr3.3:17714427-17714446 | MS.gene28223:intron | 60.0% | |
| TGTGGATAGCACCGTGTGCC+TGG | + | chr3.3:17711014-17711033 | MS.gene28223:CDS | 60.0% | |
| ! | GTCAGTGTCGTGTCGGTGTC+GGG | + | chr3.3:17710543-17710562 | MS.gene28223:intron | 60.0% |
| !! | TCAGTGTCGTGTCGGTGTCG+GGG | + | chr3.3:17710544-17710563 | MS.gene28223:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 17710120 | 17715825 | 17710120 | ID=MS.gene28223 |
| chr3.3 | mRNA | 17710120 | 17715825 | 17710120 | ID=MS.gene28223.t1;Parent=MS.gene28223 |
| chr3.3 | exon | 17710120 | 17710351 | 17710120 | ID=MS.gene28223.t1.exon1;Parent=MS.gene28223.t1 |
| chr3.3 | CDS | 17710120 | 17710351 | 17710120 | ID=cds.MS.gene28223.t1;Parent=MS.gene28223.t1 |
| chr3.3 | exon | 17710971 | 17711103 | 17710971 | ID=MS.gene28223.t1.exon2;Parent=MS.gene28223.t1 |
| chr3.3 | CDS | 17710971 | 17711103 | 17710971 | ID=cds.MS.gene28223.t1;Parent=MS.gene28223.t1 |
| chr3.3 | exon | 17711193 | 17711300 | 17711193 | ID=MS.gene28223.t1.exon3;Parent=MS.gene28223.t1 |
| chr3.3 | CDS | 17711193 | 17711300 | 17711193 | ID=cds.MS.gene28223.t1;Parent=MS.gene28223.t1 |
| chr3.3 | exon | 17712837 | 17712930 | 17712837 | ID=MS.gene28223.t1.exon4;Parent=MS.gene28223.t1 |
| chr3.3 | CDS | 17712837 | 17712930 | 17712837 | ID=cds.MS.gene28223.t1;Parent=MS.gene28223.t1 |
| chr3.3 | exon | 17713882 | 17714031 | 17713882 | ID=MS.gene28223.t1.exon5;Parent=MS.gene28223.t1 |
| chr3.3 | CDS | 17713882 | 17714031 | 17713882 | ID=cds.MS.gene28223.t1;Parent=MS.gene28223.t1 |
| chr3.3 | exon | 17714106 | 17714159 | 17714106 | ID=MS.gene28223.t1.exon6;Parent=MS.gene28223.t1 |
| chr3.3 | CDS | 17714106 | 17714159 | 17714106 | ID=cds.MS.gene28223.t1;Parent=MS.gene28223.t1 |
| chr3.3 | exon | 17715700 | 17715825 | 17715700 | ID=MS.gene28223.t1.exon7;Parent=MS.gene28223.t1 |
| chr3.3 | CDS | 17715700 | 17715825 | 17715700 | ID=cds.MS.gene28223.t1;Parent=MS.gene28223.t1 |
| Gene Sequence |
| Protein sequence |
