AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28256

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28256.t1 MTR_3g026650 94.241 573 22 3 1 572 1 563 0.0 1042
MS.gene28256.t1 MTR_3g026650 93.763 497 20 3 1 496 1 487 0.0 883
MS.gene28256.t1 MTR_4g023030 69.342 623 140 8 1 572 1 623 0.0 795
MS.gene28256.t1 MTR_3g026650 92.701 411 19 3 1 410 1 401 0.0 707
MS.gene28256.t1 MTR_4g125460 35.566 433 263 7 142 565 53 478 2.00e-86 276
MS.gene28256.t1 MTR_4g125460 35.566 433 263 7 142 565 192 617 7.82e-85 276
MS.gene28256.t1 MTR_5g064620 37.143 490 251 16 115 565 40 511 4.85e-84 271
MS.gene28256.t1 MTR_4g019210 36.427 431 252 9 151 569 205 625 1.70e-80 265
MS.gene28256.t1 MTR_3g096020 36.712 444 242 12 146 565 158 586 8.13e-80 262
MS.gene28256.t1 MTR_5g081690 36.085 424 255 7 151 565 94 510 1.47e-77 254
MS.gene28256.t1 MTR_5g099010 35.597 427 262 8 149 571 88 505 3.80e-77 255
MS.gene28256.t1 MTR_3g099480 35.604 455 238 10 143 565 106 537 9.25e-77 253
MS.gene28256.t1 MTR_3g115220 35.920 451 272 12 127 571 59 498 1.20e-74 248
MS.gene28256.t1 MTR_4g100810 37.984 387 226 8 185 565 111 489 1.54e-74 247
MS.gene28256.t1 MTR_6g016015 37.968 374 218 6 185 548 118 487 2.71e-74 246
MS.gene28256.t1 MTR_4g082310 35.678 398 237 8 185 568 100 492 7.00e-72 239
MS.gene28256.t1 MTR_5g032100 33.987 459 244 9 150 565 59 501 1.17e-70 236
MS.gene28256.t1 MTR_4g110030 37.337 383 223 8 176 547 111 487 3.88e-70 235
MS.gene28256.t1 MTR_5g012770 35.484 434 259 11 135 565 79 494 5.22e-70 234
MS.gene28256.t1 MTR_2g059350 36.870 377 223 7 176 542 110 481 2.59e-69 233
MS.gene28256.t1 MTR_5g042200 35.075 402 242 8 185 572 88 484 2.74e-68 229
MS.gene28256.t1 MTR_1g031590 34.483 435 257 9 150 566 123 547 4.78e-68 230
MS.gene28256.t1 MTR_4g084570 33.871 434 259 9 150 565 124 547 1.64e-67 229
MS.gene28256.t1 MTR_3g100310 32.762 467 245 10 147 565 70 515 4.10e-67 227
MS.gene28256.t1 MTR_5g059260 32.438 447 272 8 143 565 119 559 9.68e-66 225
MS.gene28256.t1 MTR_3g086570 33.183 443 263 13 147 565 114 547 8.01e-65 221
MS.gene28256.t1 MTR_3g005340 33.920 398 243 7 185 565 150 544 1.05e-62 216
MS.gene28256.t1 MTR_1g102030 29.291 437 278 11 151 568 61 485 7.75e-55 194
MS.gene28256.t1 MTR_4g132590 30.626 431 243 12 185 565 68 492 1.39e-47 173
MS.gene28256.t1 MTR_4g132590 30.626 431 243 12 185 565 167 591 6.91e-47 173
MS.gene28256.t1 MTR_2g016470 29.512 471 269 17 147 565 155 614 5.48e-46 171
MS.gene28256.t1 MTR_3g086570 31.790 324 191 10 147 447 114 430 3.70e-42 157
MS.gene28256.t1 MTR_1g101990 29.577 284 188 7 290 568 5 281 5.38e-38 142
MS.gene28256.t1 MTR_4g023050 77.215 79 18 0 494 572 30 108 6.20e-38 135
MS.gene28256.t1 MTR_4g010990 26.786 392 245 13 185 565 78 438 6.52e-33 131
MS.gene28256.t1 MTR_4g010990 26.121 379 238 13 198 565 2 349 2.50e-29 119
MS.gene28256.t1 MTR_7g017330 28.966 290 191 6 185 459 101 390 8.72e-29 121
MS.gene28256.t1 MTR_3g092590 29.932 294 191 6 185 463 93 386 2.79e-28 119
MS.gene28256.t1 MTR_3g092590 29.932 294 191 6 185 463 93 386 2.93e-28 120
MS.gene28256.t1 MTR_1g088900 64.368 87 1 1 270 356 38 94 6.65e-26 107
MS.gene28256.t1 MTR_1g007390 29.740 269 174 6 210 463 124 392 1.57e-23 105
MS.gene28256.t1 MTR_4g008200 25.872 344 194 14 185 510 38 338 2.54e-21 96.3
MS.gene28256.t1 MTR_4g008200 25.872 344 194 14 185 510 89 389 4.46e-21 96.3
MS.gene28256.t1 MTR_7g064210 33.721 172 106 2 288 452 19 189 3.94e-20 93.6
MS.gene28256.t1 MTR_2g038320 23.918 439 248 14 112 518 26 410 6.64e-20 92.8
MS.gene28256.t1 MTR_1g101985 39.623 106 60 1 151 256 61 162 1.75e-17 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28256.t1 AT2G44500 66.491 570 163 6 11 571 17 567 0.0 751
MS.gene28256.t1 AT3G07900 61.552 567 209 6 10 570 14 577 0.0 681
MS.gene28256.t1 AT5G63390 61.111 432 164 2 138 565 117 548 0.0 561
MS.gene28256.t1 AT2G44500 63.081 409 123 6 11 410 17 406 5.81e-169 486
MS.gene28256.t1 AT3G54100 35.550 436 253 9 151 571 195 617 3.54e-79 262
MS.gene28256.t1 AT5G64600 36.735 441 240 11 150 566 90 515 8.12e-79 258
MS.gene28256.t1 AT5G35570 35.698 437 253 10 150 571 223 646 8.88e-79 261
MS.gene28256.t1 AT1G22460 35.308 439 261 5 143 565 126 557 8.91e-79 259
MS.gene28256.t1 AT5G01100 35.023 434 262 8 151 572 190 615 1.01e-77 258
MS.gene28256.t1 AT1G20550 35.731 431 264 9 145 571 74 495 7.02e-77 254
MS.gene28256.t1 AT1G76270 35.880 432 264 8 145 572 71 493 6.56e-75 249
MS.gene28256.t1 AT2G37980 34.028 432 265 9 151 571 199 621 6.83e-74 248
MS.gene28256.t1 AT4G24530 34.549 466 236 11 148 565 72 516 2.72e-73 243
MS.gene28256.t1 AT2G03280 38.108 370 219 5 186 547 92 459 1.07e-72 241
MS.gene28256.t1 AT4G38390 34.411 433 271 7 144 571 87 511 2.00e-72 242
MS.gene28256.t1 AT5G15740 37.265 373 220 6 185 547 109 477 3.16e-71 237
MS.gene28256.t1 AT5G65470 33.333 456 259 7 148 566 56 503 1.49e-69 233
MS.gene28256.t1 AT1G14020 34.913 401 240 8 186 571 95 489 5.95e-69 231
MS.gene28256.t1 AT1G14970 33.716 436 261 8 148 565 7 432 8.75e-69 229
MS.gene28256.t1 AT3G02250 36.290 372 225 6 185 547 109 477 2.87e-68 229
MS.gene28256.t1 AT1G14970 33.641 434 260 8 150 565 129 552 5.43e-67 228
MS.gene28256.t1 AT2G03280 35.516 397 219 6 186 547 92 486 5.74e-67 226
MS.gene28256.t1 AT1G14970 34.069 408 249 6 175 565 2 406 8.69e-66 220
MS.gene28256.t1 AT4G16650 38.931 393 214 11 185 565 125 503 1.89e-65 223
MS.gene28256.t1 AT4G16650 38.931 393 214 11 185 565 125 503 1.89e-65 223
MS.gene28256.t1 AT3G26370 34.422 398 241 9 185 565 161 555 3.59e-64 220
MS.gene28256.t1 AT1G35510 32.028 434 269 8 151 567 134 558 7.47e-63 217
MS.gene28256.t1 AT1G38065 33.257 439 245 12 162 565 3 428 9.27e-63 214
MS.gene28256.t1 AT2G01480 33.820 411 252 6 171 564 143 550 2.01e-62 215
MS.gene28256.t1 AT1G38065 33.495 412 231 10 185 565 39 438 3.13e-62 213
MS.gene28256.t1 AT1G04910 30.374 428 271 10 151 565 61 474 6.90e-62 213
MS.gene28256.t1 AT1G38131 33.257 439 245 12 162 565 132 557 1.93e-61 213
MS.gene28256.t1 AT2G01480 34.146 369 228 4 171 524 143 511 6.51e-57 200
MS.gene28256.t1 AT1G11990 27.428 587 348 17 17 566 44 589 6.10e-54 193
MS.gene28256.t1 AT1G62330 29.668 482 267 16 142 567 186 651 1.37e-53 193
MS.gene28256.t1 AT1G11990 28.053 524 305 14 103 566 100 611 1.34e-49 181
MS.gene28256.t1 AT1G29200 31.788 453 252 14 161 565 50 493 2.34e-46 170
MS.gene28256.t1 AT1G29200 31.788 453 252 14 161 565 50 493 2.34e-46 170
MS.gene28256.t1 AT1G29200 31.788 453 252 14 161 565 166 609 6.36e-46 171
MS.gene28256.t1 AT1G29200 32.084 427 234 13 187 565 1 419 5.51e-45 165
MS.gene28256.t1 AT3G30300 31.615 291 182 7 185 459 103 392 3.58e-32 132
MS.gene28256.t1 AT3G30300 31.615 291 182 7 185 459 103 392 3.58e-32 132
MS.gene28256.t1 AT3G26370 35.165 182 104 4 185 353 161 341 2.42e-29 120
MS.gene28256.t1 AT1G52630 25.385 390 251 13 185 565 77 435 3.13e-29 120
MS.gene28256.t1 AT3G03810 32.203 295 183 7 185 463 92 385 3.35e-29 122
MS.gene28256.t1 AT3G03810 32.203 295 183 7 185 463 92 385 3.35e-29 122
MS.gene28256.t1 AT1G52630 24.668 377 244 13 198 565 2 347 8.91e-26 109

Find 96 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTTATGGTTGTTGTTTC+TGG 0.112650 3.3:+18459056 MS.gene28256:CDS
CTGTTTCTTGTTGGTTTCTT+TGG 0.136955 3.3:+18458669 MS.gene28256:CDS
TTAGGAAACTCTTGGATTAA+TGG 0.176133 3.3:-18461063 None:intergenic
GCCATCTCATGGCGGAAATA+TGG 0.188939 3.3:+18461200 MS.gene28256:CDS
GTTGTTATTGCTAGAATTCT+TGG 0.212125 3.3:+18459116 MS.gene28256:CDS
TAACTTCTTTGCATTGTTCT+TGG 0.233140 3.3:-18458514 None:intergenic
AGTGACGAATTTAGAAAATA+AGG 0.251948 3.3:-18461502 None:intergenic
TTTGCAAGTCAATGTTATTT+GGG 0.282289 3.3:+18459160 MS.gene28256:CDS
CAGGGTCACAGGGCATTTAC+TGG 0.290520 3.3:+18461439 MS.gene28256:intron
TTCTTTGGTATGTTCAAGTT+TGG 0.303269 3.3:+18458684 MS.gene28256:CDS
AAATATGGGCCGTGCAATTC+AGG 0.317779 3.3:+18461215 MS.gene28256:CDS
TTGGAAGAAACCAAATGGTT+TGG 0.327696 3.3:+18458959 MS.gene28256:CDS
TTGAAGAGAAGAAGATGAAA+TGG 0.332178 3.3:-18458571 None:intergenic
CATCATTCATTTCACAAACT+TGG 0.333426 3.3:+18458777 MS.gene28256:CDS
TGGAAGAAACCAAATGGTTT+GGG 0.343688 3.3:+18458960 MS.gene28256:CDS
CTCAGAGACTATGTAATCTA+TGG 0.350975 3.3:-18461160 None:intergenic
TAGAATTCTTGGTGCTGCTT+TGG 0.357351 3.3:+18459127 MS.gene28256:CDS
TTTCTTGCTCTGTTTCTTGT+TGG 0.361638 3.3:+18458660 MS.gene28256:CDS
GGAAGCATGTGTCTCTTGTT+TGG 0.373927 3.3:-18461481 None:intergenic
TCTTTGTCCTTTGAATGTTA+TGG 0.380150 3.3:+18460573 MS.gene28256:CDS
CCTTGCTCTTCATTTAAGAA+TGG 0.389315 3.3:+18460408 MS.gene28256:CDS
GAGAATTACAACCATTTGTA+AGG 0.389523 3.3:+18461118 MS.gene28256:CDS
TTTGTCATTATGTGTGTTGA+TGG 0.390065 3.3:-18459464 None:intergenic
GGTTTATATCCCAAACCATT+TGG 0.396687 3.3:-18458969 None:intergenic
ATAACATTGACTTGCAAAAC+AGG 0.403737 3.3:-18459155 None:intergenic
GTGAGGACTGGTTGTCTCCC+TGG 0.412895 3.3:+18460445 MS.gene28256:CDS
TCACCAGAAAATCAACACTA+TGG 0.414871 3.3:+18458637 MS.gene28256:CDS
GAATTGCACCAAGACTCATT+AGG 0.415792 3.3:+18461556 MS.gene28256:CDS
CTTCAAGCAAGAGGGTCTAA+TGG 0.419592 3.3:+18458915 MS.gene28256:CDS
TGTAAGGAAAGCTTCTCTAA+TGG 0.420479 3.3:+18461134 MS.gene28256:CDS
GAGTCATTGCACATGCAATC+AGG 0.422844 3.3:-18461634 None:intergenic
AATTGCACCAAGACTCATTA+GGG 0.424630 3.3:+18461557 MS.gene28256:CDS
GATCTCGCAGTCAAGAGTTC+CGG 0.433896 3.3:-18460517 None:intergenic
TTTGAGGAAATGGGGTGTCA+GGG 0.436312 3.3:-18458713 None:intergenic
TCTCTGAAGAAGAGTTCAAT+AGG 0.438361 3.3:+18461524 MS.gene28256:CDS
CCATCTCATGGCGGAAATAT+GGG 0.439428 3.3:+18461201 MS.gene28256:CDS
AGAGAAGCTTTCCTTACAAA+TGG 0.441636 3.3:-18461129 None:intergenic
TTGTTACCAAGTTCCTCAAT+TGG 0.443511 3.3:-18460352 None:intergenic
GGATAGAAGAAAGTATCTTA+TGG 0.445638 3.3:+18459043 MS.gene28256:CDS
TAATGTTGTTTCAGGGTCAC+AGG 0.449199 3.3:+18461428 MS.gene28256:intron
CTTATGGTTGTTGTTTCTGG+TGG 0.465215 3.3:+18459059 MS.gene28256:CDS
TGGGCTGGAGGGAAACCATT+GGG 0.467264 3.3:+18461021 MS.gene28256:CDS
AAGGAAGATCTTGCCTTGCC+AGG 0.480516 3.3:+18461096 MS.gene28256:CDS
ATTATAGGAGAGAAAGTGAA+AGG 0.485674 3.3:+18459012 MS.gene28256:CDS
ACAAATGGTTGTAATTCTCC+TGG 0.488364 3.3:-18461114 None:intergenic
CTTGGATTCAAGGCTTTCAA+AGG 0.489677 3.3:+18459998 MS.gene28256:CDS
TTATGGTTGTTGTTTCTGGT+GGG 0.490217 3.3:+18459060 MS.gene28256:CDS
GCAATCAGGGACAGGATACT+TGG 0.491567 3.3:-18461620 None:intergenic
AAGATTTGCTGAGCCAATTG+AGG 0.493764 3.3:+18460339 MS.gene28256:CDS
CTGGCTGCCCTAATGAGTCT+TGG 0.495915 3.3:-18461564 None:intergenic
CACTTCATGCCACTCCGAGT+TGG 0.500852 3.3:+18459507 MS.gene28256:CDS
GCTGAGCCAATTGAGGAACT+TGG 0.502782 3.3:+18460346 MS.gene28256:CDS
AGTGGAGGCCTTCCTTCCAC+TGG 0.503682 3.3:-18459488 None:intergenic
CATTAGGGCAGCCAGAGCTT+AGG 0.507074 3.3:+18461572 MS.gene28256:CDS
CAAGAACAAGAACAAGAAAG+AGG 0.515519 3.3:+18458867 MS.gene28256:CDS
ATGTTATTTGGGGTGATGAA+AGG 0.517325 3.3:+18459171 MS.gene28256:CDS
CCCATATTTCCGCCATGAGA+TGG 0.517866 3.3:-18461201 None:intergenic
TTGGGCTGGAGGGAAACCAT+TGG 0.519413 3.3:+18461020 MS.gene28256:CDS
ATGGAGTTTATGATTTGTGA+TGG 0.526571 3.3:-18458552 None:intergenic
AAAGATGTTTGGGTGAGGAC+TGG 0.531396 3.3:+18460433 MS.gene28256:CDS
ACAACTTCCATAACATTCAA+AGG 0.536006 3.3:-18460580 None:intergenic
TTGCACATGCAATCAGGGAC+AGG 0.543359 3.3:-18461628 None:intergenic
TCTTCAGAAGCTTCGTTGCA+AGG 0.550451 3.3:+18460034 MS.gene28256:CDS
CGAAGCTTCTGAAGATCAGA+AGG 0.555068 3.3:-18460026 None:intergenic
AGTCATTGCACATGCAATCA+GGG 0.556382 3.3:-18461633 None:intergenic
TGACAAAGCCAGTGGAAGGA+AGG 0.559407 3.3:+18459480 MS.gene28256:CDS
TTTAGGCTACTGAAAGCTCT+AGG 0.561043 3.3:+18460973 MS.gene28256:intron
CAATGAGAGAATACAAAGAC+CGG 0.561696 3.3:+18460498 MS.gene28256:CDS
TATCTTGCGCGGATCCAACT+CGG 0.565881 3.3:-18459521 None:intergenic
TTATAGGAGAGAAAGTGAAA+GGG 0.567770 3.3:+18459013 MS.gene28256:CDS
CTTAAATGAAGAGCAAGGTA+AGG 0.569568 3.3:-18460403 None:intergenic
TTAATAACCTCATCAAACTC+AGG 0.573382 3.3:-18460475 None:intergenic
CTCGGAGTGGCATGAAGTGG+AGG 0.577955 3.3:-18459503 None:intergenic
TCTTGATGAATTGTTGAGCA+TGG 0.585458 3.3:-18458738 None:intergenic
CAACTCGGAGTGGCATGAAG+TGG 0.586354 3.3:-18459506 None:intergenic
CCATTCTTAAATGAAGAGCA+AGG 0.589706 3.3:-18460408 None:intergenic
CCACTCTCACATCATTTGCA+AGG 0.590073 3.3:-18459430 None:intergenic
AATGTTGTTTCAGGGTCACA+GGG 0.595083 3.3:+18461429 MS.gene28256:intron
TGGTTGTAATTCTCCTGGCA+AGG 0.596530 3.3:-18461109 None:intergenic
TCAAACTCAGGAGTTAGACC+AGG 0.603634 3.3:-18460463 None:intergenic
GCAGAGAGAATGAAAAGCAA+AGG 0.608567 3.3:+18460379 MS.gene28256:CDS
ATGTGCAACTTCAAGCAAGA+GGG 0.612067 3.3:+18458907 MS.gene28256:CDS
CATGTGCAACTTCAAGCAAG+AGG 0.614502 3.3:+18458906 MS.gene28256:CDS
ACTATGCAGTTCAATAGAGA+AGG 0.620483 3.3:+18459957 MS.gene28256:intron
ATAATGACAAAGCCAGTGGA+AGG 0.625234 3.3:+18459476 MS.gene28256:CDS
TCTAACTCCTGAGTTTGATG+AGG 0.626167 3.3:+18460468 MS.gene28256:CDS
CCTTGCAAATGATGTGAGAG+TGG 0.638538 3.3:+18459430 MS.gene28256:CDS
CAAATCATACCTGAATTGCA+CGG 0.659547 3.3:-18461224 None:intergenic
TCATTACTAAAACTCAAACA+TGG 0.662091 3.3:-18458990 None:intergenic
TTGCAAGTCAATGTTATTTG+GGG 0.663997 3.3:+18459161 MS.gene28256:CDS
TGCGCGGATCCAACTCGGAG+TGG 0.685091 3.3:-18459516 None:intergenic
ACACATAATGACAAAGCCAG+TGG 0.689353 3.3:+18459472 MS.gene28256:CDS
TGAATGTTATGGAAGTTGTG+AGG 0.701827 3.3:+18460584 MS.gene28256:CDS
CAAACTCAGGAGTTAGACCA+GGG 0.720616 3.3:-18460462 None:intergenic
CTGGTGGGATGAATCAACAG+AGG 0.721624 3.3:+18459075 MS.gene28256:CDS
GCTGGAGGGAAACCATTGGG+TGG 0.722830 3.3:+18461024 MS.gene28256:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGATGCAAAAATTTATT+GGG + chr3.3:18461002-18461021 MS.gene28256:CDS 15.0%
!! ATCATATATAATGAGTAAAA+GGG - chr3.3:18459923-18459942 None:intergenic 15.0%
!! TATCATATATAATGAGTAAA+AGG - chr3.3:18459924-18459943 None:intergenic 15.0%
!!! ACATTTTCATAAATTATTAC+TGG + chr3.3:18461275-18461294 MS.gene28256:intron 15.0%
!! AAAAATCTTTGTTGAGTATA+AGG + chr3.3:18461366-18461385 MS.gene28256:intron 20.0%
!! AAAATCTTTGTTGAGTATAA+GGG + chr3.3:18461367-18461386 MS.gene28256:intron 20.0%
!! CAAAAGATGCAAAAATTTAT+TGG + chr3.3:18461001-18461020 MS.gene28256:CDS 20.0%
!! TAGTGCTTATAAAGTTTAAT+CGG - chr3.3:18460218-18460237 None:intergenic 20.0%
!! TCTTCCTTATTGTAAAAATT+AGG - chr3.3:18461084-18461103 None:intergenic 20.0%
!!! ATATAACTTAATGTTGTTTC+AGG + chr3.3:18461420-18461439 MS.gene28256:intron 20.0%
!!! ATGTTTTTGGTTTCATATTT+AGG + chr3.3:18460956-18460975 MS.gene28256:intron 20.0%
!!! CAATAAATTTTTGCATCTTT+TGG - chr3.3:18461003-18461022 None:intergenic 20.0%
!!! GTTTCCTAATTTTTACAATA+AGG + chr3.3:18461077-18461096 MS.gene28256:CDS 20.0%
!!! TATAACTTAATGTTGTTTCA+GGG + chr3.3:18461421-18461440 MS.gene28256:intron 20.0%
!!! TATAGTTATGATGTTTTATG+TGG + chr3.3:18460893-18460912 MS.gene28256:intron 20.0%
!!! TGAGTTTTAGTAATGATTAT+AGG + chr3.3:18458997-18459016 MS.gene28256:CDS 20.0%
! AAGAATGGAAAAAGATGTTT+GGG + chr3.3:18460423-18460442 MS.gene28256:CDS 25.0%
! AATTTCATAGATGTCATCTT+CGG + chr3.3:18459637-18459656 MS.gene28256:intron 25.0%
! ACGAAAATCATCATAAACTA+CGG - chr3.3:18459231-18459250 None:intergenic 25.0%
! AGTGACGAATTTAGAAAATA+AGG - chr3.3:18461505-18461524 None:intergenic 25.0%
! GATTTACCATCAAAGAAAAA+TGG + chr3.3:18460546-18460565 MS.gene28256:CDS 25.0%
! TAAGAATGGAAAAAGATGTT+TGG + chr3.3:18460422-18460441 MS.gene28256:CDS 25.0%
! TACTGTCACAATCAATTATT+CGG - chr3.3:18459724-18459743 None:intergenic 25.0%
! TCATTACTAAAACTCAAACA+TGG - chr3.3:18458993-18459012 None:intergenic 25.0%
! TGTAAAAATTAGGAAACTCT+TGG - chr3.3:18461074-18461093 None:intergenic 25.0%
!! AACTTGTCATCTAAATTTTC+AGG + chr3.3:18460300-18460319 MS.gene28256:intron 25.0%
!! AAGATTTCATGAGATGTTTT+TGG + chr3.3:18460943-18460962 MS.gene28256:intron 25.0%
!! AAGTTTCTTCTTTTCTTGTA+TGG + chr3.3:18460064-18460083 MS.gene28256:intron 25.0%
!! ATAAGTGACCTTTTGTAAAA+GGG - chr3.3:18460668-18460687 None:intergenic 25.0%
!! TTTGCAAGTCAATGTTATTT+GGG + chr3.3:18459160-18459179 MS.gene28256:CDS 25.0%
!! TTTTGCAAGTCAATGTTATT+TGG + chr3.3:18459159-18459178 MS.gene28256:CDS 25.0%
!!! AAGAATAGTTCATTGCTTTT+TGG + chr3.3:18459556-18459575 MS.gene28256:intron 25.0%
!!! CATCTTGTTTTGAAATTGTA+AGG + chr3.3:18459874-18459893 MS.gene28256:intron 25.0%
ACAACTTCCATAACATTCAA+AGG - chr3.3:18460583-18460602 None:intergenic 30.0%
AGCTTAGGACTAACAAAAAT+GGG + chr3.3:18461587-18461606 MS.gene28256:CDS 30.0%
ATTATAGGAGAGAAAGTGAA+AGG + chr3.3:18459012-18459031 MS.gene28256:CDS 30.0%
CATCATTCATTTCACAAACT+TGG + chr3.3:18458777-18458796 MS.gene28256:CDS 30.0%
CTAACTCAACTTGTCAAAAT+CGG + chr3.3:18460177-18460196 MS.gene28256:intron 30.0%
CTATATTCTAATAGCAGACA+CGG - chr3.3:18460878-18460897 None:intergenic 30.0%
GAGAATTACAACCATTTGTA+AGG + chr3.3:18461118-18461137 MS.gene28256:CDS 30.0%
GGACTCAAAATTATTCACAA+AGG - chr3.3:18459596-18459615 None:intergenic 30.0%
TAACTTCTTTGCATTGTTCT+TGG - chr3.3:18458517-18458536 None:intergenic 30.0%
TCTTTGTCCTTTGAATGTTA+TGG + chr3.3:18460573-18460592 MS.gene28256:CDS 30.0%
TTAATAACCTCATCAAACTC+AGG - chr3.3:18460478-18460497 None:intergenic 30.0%
TTAGGAAACTCTTGGATTAA+TGG - chr3.3:18461066-18461085 None:intergenic 30.0%
TTATAGGAGAGAAAGTGAAA+GGG + chr3.3:18459013-18459032 MS.gene28256:CDS 30.0%
TTGAAGAGAAGAAGATGAAA+TGG - chr3.3:18458574-18458593 None:intergenic 30.0%
TTTGTCATTATGTGTGTTGA+TGG - chr3.3:18459467-18459486 None:intergenic 30.0%
! ATGGAGTTTATGATTTGTGA+TGG - chr3.3:18458555-18458574 None:intergenic 30.0%
! CATAAGTGACCTTTTGTAAA+AGG - chr3.3:18460669-18460688 None:intergenic 30.0%
! GTTGTTATTGCTAGAATTCT+TGG + chr3.3:18459116-18459135 MS.gene28256:CDS 30.0%
! TTCTTTGGTATGTTCAAGTT+TGG + chr3.3:18458684-18458703 MS.gene28256:CDS 30.0%
! TTGAGAAAAAGAGTGAGTTT+TGG + chr3.3:18458940-18458959 MS.gene28256:CDS 30.0%
! TTGCAAGTCAATGTTATTTG+GGG + chr3.3:18459161-18459180 MS.gene28256:CDS 30.0%
! TTTAGTAGCCCTTTTACAAA+AGG + chr3.3:18460657-18460676 MS.gene28256:intron 30.0%
! TTTTTAATCGCCTGAAGATA+TGG - chr3.3:18460247-18460266 None:intergenic 30.0%
!! AATCTGAAGTTTTACTGCAT+AGG + chr3.3:18459779-18459798 MS.gene28256:intron 30.0%
!! ATAACATTGACTTGCAAAAC+AGG - chr3.3:18459158-18459177 None:intergenic 30.0%
!! GATTTTGACAAGTTGAGTTA+GGG - chr3.3:18460178-18460197 None:intergenic 30.0%
!! GGATAGAAGAAAGTATCTTA+TGG + chr3.3:18459043-18459062 MS.gene28256:CDS 30.0%
!! GTAGTTTTTGAAGACTTCTT+TGG - chr3.3:18458612-18458631 None:intergenic 30.0%
!! TATCTTATGGTTGTTGTTTC+TGG + chr3.3:18459056-18459075 MS.gene28256:CDS 30.0%
!!! AAACCATAGTGTTGATTTTC+TGG - chr3.3:18458643-18458662 None:intergenic 30.0%
!!! TTCTTGTATGGTTTTAGCAA+AGG + chr3.3:18460076-18460095 MS.gene28256:intron 30.0%
AACCAAAACGACAATGACAT+CGG - chr3.3:18459364-18459383 None:intergenic 35.0%
AATTGCACCAAGACTCATTA+GGG + chr3.3:18461557-18461576 MS.gene28256:CDS 35.0%
ACAAATGGTTGTAATTCTCC+TGG - chr3.3:18461117-18461136 None:intergenic 35.0%
ACACATGACATTACATGACA+CGG - chr3.3:18460836-18460855 None:intergenic 35.0%
ACTACTTAGACCATATCTTC+AGG + chr3.3:18460234-18460253 MS.gene28256:intron 35.0%
ACTATGCAGTTCAATAGAGA+AGG + chr3.3:18459957-18459976 MS.gene28256:intron 35.0%
AGAGAAGCTTTCCTTACAAA+TGG - chr3.3:18461132-18461151 None:intergenic 35.0%
ATTCCACAAATGTACACTGT+AGG - chr3.3:18459617-18459636 None:intergenic 35.0%
CAAATCATACCTGAATTGCA+CGG - chr3.3:18461227-18461246 None:intergenic 35.0%
CAAGAACAAGAACAAGAAAG+AGG + chr3.3:18458867-18458886 MS.gene28256:CDS 35.0%
CAATGAGAGAATACAAAGAC+CGG + chr3.3:18460498-18460517 MS.gene28256:CDS 35.0%
CCATTCTTAAATGAAGAGCA+AGG - chr3.3:18460411-18460430 None:intergenic 35.0%
CCTTGCTCTTCATTTAAGAA+TGG + chr3.3:18460408-18460427 MS.gene28256:CDS 35.0%
CGCAAGTATCAATATTGTGT+CGG - chr3.3:18460757-18460776 None:intergenic 35.0%
CTCAGAGACTATGTAATCTA+TGG - chr3.3:18461163-18461182 None:intergenic 35.0%
CTTAAATGAAGAGCAAGGTA+AGG - chr3.3:18460406-18460425 None:intergenic 35.0%
GAGCTTAGGACTAACAAAAA+TGG + chr3.3:18461586-18461605 MS.gene28256:CDS 35.0%
GATGCAAAAATTTATTGGGC+TGG + chr3.3:18461006-18461025 MS.gene28256:CDS 35.0%
GGTTTATATCCCAAACCATT+TGG - chr3.3:18458972-18458991 None:intergenic 35.0%
TACCATCAAAGAAAAATGGC+TGG + chr3.3:18460550-18460569 MS.gene28256:CDS 35.0%
TCACCAGAAAATCAACACTA+TGG + chr3.3:18458637-18458656 MS.gene28256:CDS 35.0%
TCTTGATGAATTGTTGAGCA+TGG - chr3.3:18458741-18458760 None:intergenic 35.0%
TGAATGTTATGGAAGTTGTG+AGG + chr3.3:18460584-18460603 MS.gene28256:CDS 35.0%
TGGAAGAAACCAAATGGTTT+GGG + chr3.3:18458960-18458979 MS.gene28256:CDS 35.0%
TGTAAGGAAAGCTTCTCTAA+TGG + chr3.3:18461134-18461153 MS.gene28256:CDS 35.0%
TTGAACTGCATAGTACAACA+AGG - chr3.3:18459951-18459970 None:intergenic 35.0%
TTGGAAGAAACCAAATGGTT+TGG + chr3.3:18458959-18458978 MS.gene28256:CDS 35.0%
TTGTTACCAAGTTCCTCAAT+TGG - chr3.3:18460355-18460374 None:intergenic 35.0%
TTTGTTGAGTATAAGGGTTG+TGG + chr3.3:18461373-18461392 MS.gene28256:intron 35.0%
! ACAAGAAAGAGGAGAGTTTT+TGG + chr3.3:18458878-18458897 MS.gene28256:CDS 35.0%
! ATGCCTTTCATTTGAAGTGT+CGG - chr3.3:18460697-18460716 None:intergenic 35.0%
! ATGTTATTTGGGGTGATGAA+AGG + chr3.3:18459171-18459190 MS.gene28256:CDS 35.0%
! ATTGTTGAGCATGGTTTTTG+AGG - chr3.3:18458732-18458751 None:intergenic 35.0%
! ATTTTGTCTACTCTACAAGC+AGG - chr3.3:18459831-18459850 None:intergenic 35.0%
! CAAAAATTTATTGGGCTGGA+GGG + chr3.3:18461010-18461029 MS.gene28256:CDS 35.0%
! TCTCTGAAGAAGAGTTCAAT+AGG + chr3.3:18461524-18461543 MS.gene28256:CDS 35.0%
! TTTCTTGCTCTGTTTCTTGT+TGG + chr3.3:18458660-18458679 MS.gene28256:CDS 35.0%
! TTTTTGTTAGTCCTAAGCTC+TGG - chr3.3:18461586-18461605 None:intergenic 35.0%
!! AGAAAGTGAAAGGGTTTTGA+AGG + chr3.3:18459022-18459041 MS.gene28256:CDS 35.0%
!! AGCATGGTTTTTGAGGAAAT+GGG - chr3.3:18458725-18458744 None:intergenic 35.0%
!! CGATTTTGACAAGTTGAGTT+AGG - chr3.3:18460179-18460198 None:intergenic 35.0%
!! CTGTTTCTTGTTGGTTTCTT+TGG + chr3.3:18458669-18458688 MS.gene28256:CDS 35.0%
!! TTATGGTTGTTGTTTCTGGT+GGG + chr3.3:18459060-18459079 MS.gene28256:CDS 35.0%
!!! GAGTTTTGGAAGAAACCAAA+TGG + chr3.3:18458954-18458973 MS.gene28256:CDS 35.0%
!!! TGTTGATTTTCTGGTGAAGA+TGG - chr3.3:18458634-18458653 None:intergenic 35.0%
ACACATAATGACAAAGCCAG+TGG + chr3.3:18459472-18459491 MS.gene28256:CDS 40.0%
AGTCATTGCACATGCAATCA+GGG - chr3.3:18461636-18461655 None:intergenic 40.0%
AGTCCTACAGTGTACATTTG+TGG + chr3.3:18459611-18459630 MS.gene28256:intron 40.0%
ATAATGACAAAGCCAGTGGA+AGG + chr3.3:18459476-18459495 MS.gene28256:CDS 40.0%
ATAGATGTCATCTTCGGTCA+AGG + chr3.3:18459643-18459662 MS.gene28256:intron 40.0%
ATGTGCAACTTCAAGCAAGA+GGG + chr3.3:18458907-18458926 MS.gene28256:CDS 40.0%
CTTCAGATTGAAGACGCATT+TGG - chr3.3:18459768-18459787 None:intergenic 40.0%
CTTGGATTCAAGGCTTTCAA+AGG + chr3.3:18459998-18460017 MS.gene28256:CDS 40.0%
GAATTGCACCAAGACTCATT+AGG + chr3.3:18461556-18461575 MS.gene28256:CDS 40.0%
GCAGAGAGAATGAAAAGCAA+AGG + chr3.3:18460379-18460398 MS.gene28256:CDS 40.0%
GTCTGATGTTTGTGTCTTGT+CGG + chr3.3:18461324-18461343 MS.gene28256:intron 40.0%
TCTAACTCCTGAGTTTGATG+AGG + chr3.3:18460468-18460487 MS.gene28256:CDS 40.0%
TGGAAAAAGATGTTTGGGTG+AGG + chr3.3:18460428-18460447 MS.gene28256:CDS 40.0%
TTTAGGCTACTGAAAGCTCT+AGG + chr3.3:18460973-18460992 MS.gene28256:intron 40.0%
! AAAGCTTCTTTTCCACCCAA+TGG - chr3.3:18461039-18461058 None:intergenic 40.0%
! AAATGAAAGGCATGTCTGAG+TGG + chr3.3:18460704-18460723 MS.gene28256:intron 40.0%
! ATGCTATTTGTCAGAACACG+AGG + chr3.3:18460108-18460127 MS.gene28256:intron 40.0%
! CTTCACATTGAAAGCGTGTT+TGG + chr3.3:18459282-18459301 MS.gene28256:intron 40.0%
! GATGTTTTCATGCCATCTCA+TGG + chr3.3:18461189-18461208 MS.gene28256:CDS 40.0%
! GCAAAAATTTATTGGGCTGG+AGG + chr3.3:18461009-18461028 MS.gene28256:CDS 40.0%
!! AAGATTTGCTGAGCCAATTG+AGG + chr3.3:18460339-18460358 MS.gene28256:CDS 40.0%
!! AATGTTGTTTCAGGGTCACA+GGG + chr3.3:18461429-18461448 MS.gene28256:intron 40.0%
!! CTTATGGTTGTTGTTTCTGG+TGG + chr3.3:18459059-18459078 MS.gene28256:CDS 40.0%
!! GAGCATGGTTTTTGAGGAAA+TGG - chr3.3:18458726-18458745 None:intergenic 40.0%
!! GCATGGTTTTTGAGGAAATG+GGG - chr3.3:18458724-18458743 None:intergenic 40.0%
!! TAATGTTGTTTCAGGGTCAC+AGG + chr3.3:18461428-18461447 MS.gene28256:intron 40.0%
!! TACCGATGTCATTGTCGTTT+TGG + chr3.3:18459359-18459378 MS.gene28256:intron 40.0%
!! TAGAATTCTTGGTGCTGCTT+TGG + chr3.3:18459127-18459146 MS.gene28256:CDS 40.0%
!!! CGTTTTGGTTGCAGTGAATT+TGG + chr3.3:18459374-18459393 MS.gene28256:intron 40.0%
!!! CTCTTTTGAGATATCTTGCG+CGG - chr3.3:18459535-18459554 None:intergenic 40.0%
!!! GAAGGTGTTTTGCTTTTACG+CGG + chr3.3:18459975-18459994 MS.gene28256:CDS 40.0%
!!! GACCAGCCATTTTTCTTTGA+TGG - chr3.3:18460555-18460574 None:intergenic 40.0%
!!! GTTTGGTGTCTGACATGTTT+TGG + chr3.3:18459299-18459318 MS.gene28256:intron 40.0%
AAAGATGTTTGGGTGAGGAC+TGG + chr3.3:18460433-18460452 MS.gene28256:CDS 45.0%
AAATATGGGCCGTGCAATTC+AGG + chr3.3:18461215-18461234 MS.gene28256:CDS 45.0%
CAAACTCAGGAGTTAGACCA+GGG - chr3.3:18460465-18460484 None:intergenic 45.0%
CATGTGCAACTTCAAGCAAG+AGG + chr3.3:18458906-18458925 MS.gene28256:CDS 45.0%
CCACTCTCACATCATTTGCA+AGG - chr3.3:18459433-18459452 None:intergenic 45.0%
CCTTGCAAATGATGTGAGAG+TGG + chr3.3:18459430-18459449 MS.gene28256:CDS 45.0%
CTTCAAGCAAGAGGGTCTAA+TGG + chr3.3:18458915-18458934 MS.gene28256:CDS 45.0%
GAGTCATTGCACATGCAATC+AGG - chr3.3:18461637-18461656 None:intergenic 45.0%
TCAAACTCAGGAGTTAGACC+AGG - chr3.3:18460466-18460485 None:intergenic 45.0%
TCATCTTCGGTCAAGGTCAT+CGG + chr3.3:18459650-18459669 MS.gene28256:intron 45.0%
TCTTCAGAAGCTTCGTTGCA+AGG + chr3.3:18460034-18460053 MS.gene28256:CDS 45.0%
TGGTTGTAATTCTCCTGGCA+AGG - chr3.3:18461112-18461131 None:intergenic 45.0%
! CCATCTCATGGCGGAAATAT+GGG + chr3.3:18461201-18461220 MS.gene28256:CDS 45.0%
! CGAAGCTTCTGAAGATCAGA+AGG - chr3.3:18460029-18460048 None:intergenic 45.0%
! GCACCGACACTTCAAATGAA+AGG + chr3.3:18460691-18460710 MS.gene28256:intron 45.0%
! GGAAGCATGTGTCTCTTGTT+TGG - chr3.3:18461484-18461503 None:intergenic 45.0%
! GTTTTCATGCCATCTCATGG+CGG + chr3.3:18461192-18461211 MS.gene28256:CDS 45.0%
! TTTGAGGAAATGGGGTGTCA+GGG - chr3.3:18458716-18458735 None:intergenic 45.0%
!! TGTTTTGCTTTTACGCGGCT+TGG + chr3.3:18459980-18459999 MS.gene28256:CDS 45.0%
!! TTTTACGCGGCTTGGATTCA+AGG + chr3.3:18459988-18460007 MS.gene28256:CDS 45.0%
!! TTTTGAGGAAATGGGGTGTC+AGG - chr3.3:18458717-18458736 None:intergenic 45.0%
!!! TATTTTTCTAAAATTATTAT+CGG + chr3.3:18460793-18460812 MS.gene28256:intron 5.0%
AAGGAAGATCTTGCCTTGCC+AGG + chr3.3:18461096-18461115 MS.gene28256:CDS 50.0%
ACGGACACGAAGCACAAACA+CGG - chr3.3:18460859-18460878 None:intergenic 50.0%
CCCATATTTCCGCCATGAGA+TGG - chr3.3:18461204-18461223 None:intergenic 50.0%
CTGGTGGGATGAATCAACAG+AGG + chr3.3:18459075-18459094 MS.gene28256:CDS 50.0%
GATCTCGCAGTCAAGAGTTC+CGG - chr3.3:18460520-18460539 None:intergenic 50.0%
GCAATCAGGGACAGGATACT+TGG - chr3.3:18461623-18461642 None:intergenic 50.0%
GCTGAGCCAATTGAGGAACT+TGG + chr3.3:18460346-18460365 MS.gene28256:CDS 50.0%
TATCTTGCGCGGATCCAACT+CGG - chr3.3:18459524-18459543 None:intergenic 50.0%
TGACAAAGCCAGTGGAAGGA+AGG + chr3.3:18459480-18459499 MS.gene28256:CDS 50.0%
TTGCACATGCAATCAGGGAC+AGG - chr3.3:18461631-18461650 None:intergenic 50.0%
! GAAAGGCATGTCTGAGTGGT+TGG + chr3.3:18460708-18460727 MS.gene28256:intron 50.0%
! GCCATCTCATGGCGGAAATA+TGG + chr3.3:18461200-18461219 MS.gene28256:CDS 50.0%
CAACTCGGAGTGGCATGAAG+TGG - chr3.3:18459509-18459528 None:intergenic 55.0%
CACTTCATGCCACTCCGAGT+TGG + chr3.3:18459507-18459526 MS.gene28256:CDS 55.0%
CATTAGGGCAGCCAGAGCTT+AGG + chr3.3:18461572-18461591 MS.gene28256:CDS 55.0%
CTGGCTGCCCTAATGAGTCT+TGG - chr3.3:18461567-18461586 None:intergenic 55.0%
! CAGGGTCACAGGGCATTTAC+TGG + chr3.3:18461439-18461458 MS.gene28256:intron 55.0%
! TGGGCTGGAGGGAAACCATT+GGG + chr3.3:18461021-18461040 MS.gene28256:CDS 55.0%
! TTGGGCTGGAGGGAAACCAT+TGG + chr3.3:18461020-18461039 MS.gene28256:CDS 55.0%
AGTGGAGGCCTTCCTTCCAC+TGG - chr3.3:18459491-18459510 None:intergenic 60.0%
CTCGGAGTGGCATGAAGTGG+AGG - chr3.3:18459506-18459525 None:intergenic 60.0%
GCTGGAGGGAAACCATTGGG+TGG + chr3.3:18461024-18461043 MS.gene28256:CDS 60.0%
!! GTGAGGACTGGTTGTCTCCC+TGG + chr3.3:18460445-18460464 MS.gene28256:CDS 60.0%
TGCGCGGATCCAACTCGGAG+TGG - chr3.3:18459519-18459538 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 18458504 18461672 18458504 ID=MS.gene28256
chr3.3 mRNA 18458504 18461672 18458504 ID=MS.gene28256.t1;Parent=MS.gene28256
chr3.3 exon 18458504 18459192 18458504 ID=MS.gene28256.t1.exon1;Parent=MS.gene28256.t1
chr3.3 CDS 18458504 18459192 18458504 ID=cds.MS.gene28256.t1;Parent=MS.gene28256.t1
chr3.3 exon 18459388 18459553 18459388 ID=MS.gene28256.t1.exon2;Parent=MS.gene28256.t1
chr3.3 CDS 18459388 18459553 18459388 ID=cds.MS.gene28256.t1;Parent=MS.gene28256.t1
chr3.3 exon 18459966 18460055 18459966 ID=MS.gene28256.t1.exon3;Parent=MS.gene28256.t1
chr3.3 CDS 18459966 18460055 18459966 ID=cds.MS.gene28256.t1;Parent=MS.gene28256.t1
chr3.3 exon 18460322 18460605 18460322 ID=MS.gene28256.t1.exon4;Parent=MS.gene28256.t1
chr3.3 CDS 18460322 18460605 18460322 ID=cds.MS.gene28256.t1;Parent=MS.gene28256.t1
chr3.3 exon 18460978 18461236 18460978 ID=MS.gene28256.t1.exon5;Parent=MS.gene28256.t1
chr3.3 CDS 18460978 18461236 18460978 ID=cds.MS.gene28256.t1;Parent=MS.gene28256.t1
chr3.3 exon 18461442 18461672 18461442 ID=MS.gene28256.t1.exon6;Parent=MS.gene28256.t1
chr3.3 CDS 18461442 18461672 18461442 ID=cds.MS.gene28256.t1;Parent=MS.gene28256.t1
Gene Sequence

>MS.gene28256

ATGGCAAAATCCAAGAACAATGCAAAGAAGTTATCATACATATCAGTTCCATCACAAATCATAAACTCCATTTCATCTTCTTCTCTTCAATCTCTCATTGATTCTCCAAAGAAGTCTTCAAAAACTACCATCTTCACCAGAAAATCAACACTATGGTTTCTTGCTCTGTTTCTTGTTGGTTTCTTTGGTATGTTCAAGTTTGGTTTCAACCCTGACACCCCATTTCCTCAAAAACCATGCTCAACAATTCATCAAGAGTTCTCAATATCAAATCATCATTCATTTCACAAACTTGGTCTTAATGTTCTCTTGCAGAATGAGAGAAAAACATCTTTGAAAAATGATCATAATGATGAGTTTTTACAAGAACAAGAACAAGAAAGAGGAGAGTTTTTGGTTTCTCATGTGCAACTTCAAGCAAGAGGGTCTAATGGATTTGAGAAAAAGAGTGAGTTTTGGAAGAAACCAAATGGTTTGGGATATAAACCATGTTTGAGTTTTAGTAATGATTATAGGAGAGAAAGTGAAAGGGTTTTGAAGGATAGAAGAAAGTATCTTATGGTTGTTGTTTCTGGTGGGATGAATCAACAGAGGAATCAGATTGTTGATGCTGTTGTTATTGCTAGAATTCTTGGTGCTGCTTTGGTTGTTCCTGTTTTGCAAGTCAATGTTATTTGGGGTGATGAAAGGTATAGATTAAATAAATTAAATATCGTCTTTTTTTCCGTAGTTTATGATGATTTTCGTTTTCTATGTTGAATCTTATTTAGCACTGATACTTCACATTGAAAGCGTGTTTGGTGTCTGACATGTTTTGGTATTGAACACTGACACATGTGATTACATTCAATTTATTACCGATGTCATTGTCGTTTTGGTTGCAGTGAATTTGGTGACATATTTGATTTAGAACACTTCAAAAGAGTCCTTGCAAATGATGTGAGAGTGGTTTCAGCATTGCCATCAACACACATAATGACAAAGCCAGTGGAAGGAAGGCCTCCACTTCATGCCACTCCGAGTTGGATCCGCGCAAGATATCTCAAAAGAGTAAGAATAGTTCATTGCTTTTTGGTTTGTTTACTTGTTCCTTTGTGAATAATTTTGAGTCCTACAGTGTACATTTGTGGAATAATTTCATAGATGTCATCTTCGGTCAAGGTCATCGGACACAATACTGACATTGACACGTCGACATTAGCAATAATTTGAGAAAACCGAATAATTGATTGTGACAGTATGTTTTTGTTACTGTCATACACCAAATGCGTCTTCAATCTGAAGTTTTACTGCATAGGTTATTTATATGACACAAAATTTGTTGCCTGCTTGTAGAGTAGACAAAATATTATAAGCTTTTGCATATTATTCATCTTGTTTTGAAATTGTAAGGTGTGTTAATGCTGTTGAACTAGACCCTTTTACTCATTATATATGATATGATCCTTGTTGTACTATGCAGTTCAATAGAGAAGGTGTTTTGCTTTTACGCGGCTTGGATTCAAGGCTTTCAAAGGATCTTCCTTCTGATCTTCAGAAGCTTCGTTGCAAGGTATAGAAAAGTTTCTTCTTTTCTTGTATGGTTTTAGCAAAGGAAAAGAAAAATGCTATTTGTCAGAACACGAGGAAGTGTATTTTGATTGATGATTGCGTTCGTGAAAATAAGTTAGTCCCTAACTCAACTTGTCAAAATCGGCTCGTAAGTTGAAGACCGATTAAACTTTATAAGCACTACTTAGACCATATCTTCAGGCGATTAAAAATTTATTTATATGACAAATAATTGCTGATTTTGAAACTTGTCATCTAAATTTTCAGGTTGCTTTTAATGCATTAAGATTTGCTGAGCCAATTGAGGAACTTGGTAACAAGATTGCAGAGAGAATGAAAAGCAAAGGACCTTACCTTGCTCTTCATTTAAGAATGGAAAAAGATGTTTGGGTGAGGACTGGTTGTCTCCCTGGTCTAACTCCTGAGTTTGATGAGGTTATTAACAATGAGAGAATACAAAGACCGGAACTCTTGACTGCGAGATCAAACATGATTTACCATCAAAGAAAAATGGCTGGTCTTTGTCCTTTGAATGTTATGGAAGTTGTGAGGTAATTCTTCTATCTATCTATCGATCTATCTATTATTACTAAACAGAATGATTTAGTAGCCCTTTTACAAAAGGTCACTTATGTAGCACCGACACTTCAAATGAAAGGCATGTCTGAGTGGTTGGTCATCACGAGTTGATGTCAAACACCGACACAATATTGATACTTGCGATTACATACAGCACTTTATTTTTCTAAAATTATTATCGGTGTATGTCTGTCGTAATCCGTGTCATGTAATGTCATGTGTCCGTGTTTGTGCTTCGTGTCCGTGTCTGCTATTAGAATATAGTTATGATGTTTTATGTGGATTATCAAAATTTTGAGCGTAAAAAACAAGATTTCATGAGATGTTTTTGGTTTCATATTTAGGCTACTGAAAGCTCTAGGAGCTCCAAAAGATGCAAAAATTTATTGGGCTGGAGGGAAACCATTGGGTGGAAAAGAAGCTTTACTTCCATTAATCCAAGAGTTTCCTAATTTTTACAATAAGGAAGATCTTGCCTTGCCAGGAGAATTACAACCATTTGTAAGGAAAGCTTCTCTAATGGCTGCCATAGATTACATAGTCTCTGAGAAGAGTGATGTTTTCATGCCATCTCATGGCGGAAATATGGGCCGTGCAATTCAGGTATGATTTGCTGACACATGTGTTTACATTCAGTCACTACATTTTCATAAATTATTACTGGTGTCTACATGTCAGTGTCAATATCGTGTCTGATGTTTGTGTCTTGTCGGTGCTTCATCGATACAAACAAAAAATCTTTGTTGAGTATAAGGGTTGTGGACTTATTGTGAAAATTTCTAATTTATATAACTTAATGTTGTTTCAGGGTCACAGGGCATTTACTGGACACATGAAATATATAACTCCAAACAAGAGACACATGCTTCCTTATTTTCTAAATTCGTCACTCTCTGAAGAAGAGTTCAATAGGATAATCAAAGAATTGCACCAAGACTCATTAGGGCAGCCAGAGCTTAGGACTAACAAAAATGGGAGAGATGTTACCAAGTATCCTGTCCCTGATTGCATGTGCAATGACTCACATGCTCAATCCTGA
Protein sequence

>MS.gene28256.t1

MAKSKNNAKKLSYISVPSQIINSISSSSLQSLIDSPKKSSKTTIFTRKSTLWFLALFLVGFFGMFKFGFNPDTPFPQKPCSTIHQEFSISNHHSFHKLGLNVLLQNERKTSLKNDHNDEFLQEQEQERGEFLVSHVQLQARGSNGFEKKSEFWKKPNGLGYKPCLSFSNDYRRESERVLKDRRKYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRVLANDVRVVSALPSTHIMTKPVEGRPPLHATPSWIRARYLKRFNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFNALRFAEPIEELGNKIAERMKSKGPYLALHLRMEKDVWVRTGCLPGLTPEFDEVINNERIQRPELLTARSNMIYHQRKMAGLCPLNVMEVVRLLKALGAPKDAKIYWAGGKPLGGKEALLPLIQEFPNFYNKEDLALPGELQPFVRKASLMAAIDYIVSEKSDVFMPSHGGNMGRAIQGHRAFTGHMKYITPNKRHMLPYFLNSSLSEEEFNRIIKELHQDSLGQPELRTNKNGRDVTKYPVPDCMCNDSHAQS