Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38303.t1 | XP_013454584.1 | 99 | 419 | 4 | 0 | 1 | 419 | 1 | 419 | 5.10E-236 | 826.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38303.t1 | Q9LU40 | 63.2 | 424 | 149 | 3 | 1 | 419 | 1 | 422 | 3.0e-152 | 539.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38303.t1 | A0A072URW6 | 99.0 | 419 | 4 | 0 | 1 | 419 | 1 | 419 | 3.7e-236 | 826.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene38303 | 0.847428 | 1.16E-59 | -1.69E-46 |
MS.gene049190 | MS.gene38303 | 0.873869 | 1.05E-67 | -1.69E-46 |
MS.gene049227 | MS.gene38303 | 0.841969 | 3.44E-58 | -1.69E-46 |
MS.gene049328 | MS.gene38303 | 0.82666 | 2.40E-54 | -1.69E-46 |
MS.gene049350 | MS.gene38303 | 0.828243 | 1.00E-54 | -1.69E-46 |
MS.gene049418 | MS.gene38303 | 0.862474 | 4.94E-64 | -1.69E-46 |
MS.gene049698 | MS.gene38303 | 0.80396 | 2.72E-49 | -1.69E-46 |
MS.gene049711 | MS.gene38303 | 0.865205 | 6.99E-65 | -1.69E-46 |
MS.gene049807 | MS.gene38303 | 0.876578 | 1.25E-68 | -1.69E-46 |
MS.gene049824 | MS.gene38303 | 0.808306 | 3.31E-50 | -1.69E-46 |
MS.gene049850 | MS.gene38303 | 0.828379 | 9.29E-55 | -1.69E-46 |
MS.gene049887 | MS.gene38303 | 0.875349 | 3.31E-68 | -1.69E-46 |
MS.gene050224 | MS.gene38303 | 0.813943 | 1.98E-51 | -1.69E-46 |
MS.gene050241 | MS.gene38303 | 0.813348 | 2.68E-51 | -1.69E-46 |
MS.gene050273 | MS.gene38303 | 0.802601 | 5.19E-49 | -1.69E-46 |
MS.gene050310 | MS.gene38303 | 0.818739 | 1.68E-52 | -1.69E-46 |
MS.gene05045 | MS.gene38303 | 0.802444 | 5.59E-49 | -1.69E-46 |
MS.gene050551 | MS.gene38303 | 0.805971 | 1.03E-49 | -1.69E-46 |
MS.gene050630 | MS.gene38303 | 0.828807 | 7.32E-55 | -1.69E-46 |
MS.gene050657 | MS.gene38303 | 0.833422 | 5.38E-56 | -1.69E-46 |
MS.gene050689 | MS.gene38303 | 0.801027 | 1.09E-48 | -1.69E-46 |
MS.gene050807 | MS.gene38303 | 0.823043 | 1.71E-53 | -1.69E-46 |
MS.gene050838 | MS.gene38303 | 0.804055 | 2.60E-49 | -1.69E-46 |
MS.gene050901 | MS.gene38303 | 0.827605 | 1.43E-54 | -1.69E-46 |
MS.gene050959 | MS.gene38303 | 0.800176 | 1.63E-48 | -1.69E-46 |
MS.gene051007 | MS.gene38303 | 0.81333 | 2.70E-51 | -1.69E-46 |
MS.gene051018 | MS.gene38303 | 0.842135 | 3.11E-58 | -1.69E-46 |
MS.gene051021 | MS.gene38303 | 0.865179 | 7.12E-65 | -1.69E-46 |
MS.gene051067 | MS.gene38303 | 0.839923 | 1.19E-57 | -1.69E-46 |
MS.gene051102 | MS.gene38303 | 0.829772 | 4.27E-55 | -1.69E-46 |
MS.gene051247 | MS.gene38303 | 0.830731 | 2.49E-55 | -1.69E-46 |
MS.gene051248 | MS.gene38303 | 0.814143 | 1.79E-51 | -1.69E-46 |
MS.gene051279 | MS.gene38303 | 0.853886 | 1.78E-61 | -1.69E-46 |
MS.gene051388 | MS.gene38303 | 0.83647 | 9.18E-57 | -1.69E-46 |
MS.gene051478 | MS.gene38303 | 0.808723 | 2.69E-50 | -1.69E-46 |
MS.gene05150 | MS.gene38303 | 0.806149 | 9.46E-50 | -1.69E-46 |
MS.gene05157 | MS.gene38303 | 0.853112 | 2.96E-61 | -1.69E-46 |
MS.gene051700 | MS.gene38303 | 0.807563 | 4.75E-50 | -1.69E-46 |
MS.gene051719 | MS.gene38303 | 0.869698 | 2.55E-66 | -1.69E-46 |
MS.gene051720 | MS.gene38303 | 0.881226 | 2.86E-70 | -1.69E-46 |
MS.gene051744 | MS.gene38303 | 0.856225 | 3.71E-62 | -1.69E-46 |
MS.gene051885 | MS.gene38303 | 0.825808 | 3.83E-54 | -1.69E-46 |
MS.gene052000 | MS.gene38303 | 0.81099 | 8.76E-51 | -1.69E-46 |
MS.gene052020 | MS.gene38303 | 0.807396 | 5.16E-50 | -1.69E-46 |
MS.gene052104 | MS.gene38303 | 0.803295 | 3.73E-49 | -1.69E-46 |
MS.gene052133 | MS.gene38303 | 0.83467 | 2.62E-56 | -1.69E-46 |
MS.gene052155 | MS.gene38303 | -0.82549 | 4.56E-54 | -1.69E-46 |
MS.gene052234 | MS.gene38303 | 0.810689 | 1.02E-50 | -1.69E-46 |
MS.gene052239 | MS.gene38303 | -0.808595 | 2.87E-50 | -1.69E-46 |
MS.gene052307 | MS.gene38303 | 0.828725 | 7.66E-55 | -1.69E-46 |
MS.gene052311 | MS.gene38303 | 0.807245 | 5.55E-50 | -1.69E-46 |
MS.gene052335 | MS.gene38303 | 0.812909 | 3.34E-51 | -1.69E-46 |
MS.gene052459 | MS.gene38303 | 0.805863 | 1.09E-49 | -1.69E-46 |
MS.gene052514 | MS.gene38303 | 0.829171 | 5.98E-55 | -1.69E-46 |
MS.gene052516 | MS.gene38303 | 0.871213 | 8.11E-67 | -1.69E-46 |
MS.gene052561 | MS.gene38303 | 0.801534 | 8.61E-49 | -1.69E-46 |
MS.gene052609 | MS.gene38303 | 0.845696 | 3.46E-59 | -1.69E-46 |
MS.gene052611 | MS.gene38303 | 0.820526 | 6.55E-53 | -1.69E-46 |
MS.gene052665 | MS.gene38303 | 0.84836 | 6.44E-60 | -1.69E-46 |
MS.gene052731 | MS.gene38303 | 0.823625 | 1.25E-53 | -1.69E-46 |
MS.gene052732 | MS.gene38303 | 0.909613 | 4.69E-82 | -1.69E-46 |
MS.gene053079 | MS.gene38303 | 0.827271 | 1.72E-54 | -1.69E-46 |
MS.gene053122 | MS.gene38303 | 0.829917 | 3.94E-55 | -1.69E-46 |
MS.gene053143 | MS.gene38303 | 0.857322 | 1.77E-62 | -1.69E-46 |
MS.gene053144 | MS.gene38303 | 0.993443 | 8.99E-200 | -1.69E-46 |
MS.gene053164 | MS.gene38303 | 0.82392 | 1.07E-53 | -1.69E-46 |
MS.gene053171 | MS.gene38303 | 0.859886 | 3.03E-63 | -1.69E-46 |
MS.gene053174 | MS.gene38303 | 0.866973 | 1.93E-65 | -1.69E-46 |
MS.gene053226 | MS.gene38303 | 0.831999 | 1.21E-55 | -1.69E-46 |
MS.gene053536 | MS.gene38303 | 0.855262 | 7.10E-62 | -1.69E-46 |
MS.gene053538 | MS.gene38303 | 0.856392 | 3.32E-62 | -1.69E-46 |
MS.gene053581 | MS.gene38303 | 0.88691 | 2.27E-72 | -1.69E-46 |
MS.gene053599 | MS.gene38303 | 0.822698 | 2.06E-53 | -1.69E-46 |
MS.gene054550 | MS.gene38303 | 0.86882 | 4.92E-66 | -1.69E-46 |
MS.gene054554 | MS.gene38303 | 0.832805 | 7.67E-56 | -1.69E-46 |
MS.gene054584 | MS.gene38303 | 0.99253 | 7.56E-194 | -1.69E-46 |
MS.gene054651 | MS.gene38303 | 0.80906 | 2.28E-50 | -1.69E-46 |
MS.gene054824 | MS.gene38303 | 0.846094 | 2.69E-59 | -1.69E-46 |
MS.gene055083 | MS.gene38303 | 0.845491 | 3.93E-59 | -1.69E-46 |
MS.gene055144 | MS.gene38303 | 0.839232 | 1.79E-57 | -1.69E-46 |
MS.gene055465 | MS.gene38303 | 0.889891 | 1.61E-73 | -1.69E-46 |
MS.gene055466 | MS.gene38303 | 0.875714 | 2.48E-68 | -1.69E-46 |
MS.gene055467 | MS.gene38303 | 0.834731 | 2.53E-56 | -1.69E-46 |
MS.gene055468 | MS.gene38303 | 0.874387 | 7.03E-68 | -1.69E-46 |
MS.gene055469 | MS.gene38303 | 0.874341 | 7.29E-68 | -1.69E-46 |
MS.gene055512 | MS.gene38303 | 0.818423 | 1.98E-52 | -1.69E-46 |
MS.gene055513 | MS.gene38303 | 0.819157 | 1.35E-52 | -1.69E-46 |
MS.gene055537 | MS.gene38303 | 0.903183 | 4.51E-79 | -1.69E-46 |
MS.gene055580 | MS.gene38303 | -0.901862 | 1.74E-78 | -1.69E-46 |
MS.gene05574 | MS.gene38303 | 0.807371 | 5.22E-50 | -1.69E-46 |
MS.gene055764 | MS.gene38303 | 0.835348 | 1.77E-56 | -1.69E-46 |
MS.gene055890 | MS.gene38303 | 0.862976 | 3.46E-64 | -1.69E-46 |
MS.gene055891 | MS.gene38303 | 0.870718 | 1.18E-66 | -1.69E-46 |
MS.gene056005 | MS.gene38303 | 0.823547 | 1.31E-53 | -1.69E-46 |
MS.gene056043 | MS.gene38303 | -0.883013 | 6.43E-71 | -1.69E-46 |
MS.gene056050 | MS.gene38303 | 0.817992 | 2.47E-52 | -1.69E-46 |
MS.gene056169 | MS.gene38303 | 0.816647 | 4.97E-52 | -1.69E-46 |
MS.gene056228 | MS.gene38303 | 0.850768 | 1.37E-60 | -1.69E-46 |
MS.gene056308 | MS.gene38303 | 0.862058 | 6.63E-64 | -1.69E-46 |
MS.gene056368 | MS.gene38303 | 0.824309 | 8.66E-54 | -1.69E-46 |
MS.gene056396 | MS.gene38303 | 0.842587 | 2.36E-58 | -1.69E-46 |
MS.gene056398 | MS.gene38303 | 0.810054 | 1.39E-50 | -1.69E-46 |
MS.gene056507 | MS.gene38303 | 0.864576 | 1.10E-64 | -1.69E-46 |
MS.gene056545 | MS.gene38303 | 0.803354 | 3.63E-49 | -1.69E-46 |
MS.gene056553 | MS.gene38303 | 0.855637 | 5.52E-62 | -1.69E-46 |
MS.gene056584 | MS.gene38303 | 0.80488 | 1.75E-49 | -1.69E-46 |
MS.gene057082 | MS.gene38303 | 0.817716 | 2.86E-52 | -1.69E-46 |
MS.gene057294 | MS.gene38303 | 0.824938 | 6.15E-54 | -1.69E-46 |
MS.gene057444 | MS.gene38303 | 0.808012 | 3.82E-50 | -1.69E-46 |
MS.gene057446 | MS.gene38303 | 0.822967 | 1.78E-53 | -1.69E-46 |
MS.gene057915 | MS.gene38303 | 0.808662 | 2.77E-50 | -1.69E-46 |
MS.gene058010 | MS.gene38303 | 0.81893 | 1.52E-52 | -1.69E-46 |
MS.gene058087 | MS.gene38303 | 0.836413 | 9.50E-57 | -1.69E-46 |
MS.gene058330 | MS.gene38303 | 0.814667 | 1.37E-51 | -1.69E-46 |
MS.gene058339 | MS.gene38303 | 0.822255 | 2.61E-53 | -1.69E-46 |
MS.gene058492 | MS.gene38303 | 0.806469 | 8.10E-50 | -1.69E-46 |
MS.gene058625 | MS.gene38303 | 0.818349 | 2.05E-52 | -1.69E-46 |
MS.gene058649 | MS.gene38303 | 0.85136 | 9.34E-61 | -1.69E-46 |
MS.gene058668 | MS.gene38303 | 0.850234 | 1.94E-60 | -1.69E-46 |
MS.gene058852 | MS.gene38303 | 0.838022 | 3.68E-57 | -1.69E-46 |
MS.gene058945 | MS.gene38303 | 0.83539 | 1.73E-56 | -1.69E-46 |
MS.gene05894 | MS.gene38303 | 0.855863 | 4.74E-62 | -1.69E-46 |
MS.gene059015 | MS.gene38303 | 0.843796 | 1.12E-58 | -1.69E-46 |
MS.gene059154 | MS.gene38303 | 0.859403 | 4.24E-63 | -1.69E-46 |
MS.gene059171 | MS.gene38303 | 0.802341 | 5.87E-49 | -1.69E-46 |
MS.gene059297 | MS.gene38303 | 0.825101 | 5.63E-54 | -1.69E-46 |
MS.gene059424 | MS.gene38303 | 0.848384 | 6.34E-60 | -1.69E-46 |
MS.gene059426 | MS.gene38303 | 0.818902 | 1.54E-52 | -1.69E-46 |
MS.gene059570 | MS.gene38303 | 0.82651 | 2.61E-54 | -1.69E-46 |
MS.gene059625 | MS.gene38303 | 0.823693 | 1.21E-53 | -1.69E-46 |
MS.gene059863 | MS.gene38303 | 0.833507 | 5.12E-56 | -1.69E-46 |
MS.gene059937 | MS.gene38303 | 0.812453 | 4.21E-51 | -1.69E-46 |
MS.gene059965 | MS.gene38303 | 0.800974 | 1.12E-48 | -1.69E-46 |
MS.gene060194 | MS.gene38303 | 0.839806 | 1.27E-57 | -1.69E-46 |
MS.gene060519 | MS.gene38303 | 0.856031 | 4.23E-62 | -1.69E-46 |
MS.gene060587 | MS.gene38303 | 0.87247 | 3.10E-67 | -1.69E-46 |
MS.gene060603 | MS.gene38303 | 0.857041 | 2.14E-62 | -1.69E-46 |
MS.gene060884 | MS.gene38303 | 0.871013 | 9.44E-67 | -1.69E-46 |
MS.gene060886 | MS.gene38303 | 0.869255 | 3.55E-66 | -1.69E-46 |
MS.gene060888 | MS.gene38303 | 0.831064 | 2.06E-55 | -1.69E-46 |
MS.gene061006 | MS.gene38303 | 0.833931 | 4.02E-56 | -1.69E-46 |
MS.gene061100 | MS.gene38303 | 0.833913 | 4.06E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene064122 | MS.gene38303 | PPI |
MS.gene83787 | MS.gene38303 | PPI |
MS.gene066643 | MS.gene38303 | PPI |
MS.gene87552 | MS.gene38303 | PPI |
MS.gene50341 | MS.gene38303 | PPI |
MS.gene79356 | MS.gene38303 | PPI |
MS.gene38303 | MS.gene28256 | PPI |
MS.gene93583 | MS.gene38303 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38303.t1 | MTR_4g008200 | 99.045 | 419 | 4 | 0 | 1 | 419 | 1 | 419 | 0.0 | 857 |
MS.gene38303.t1 | MTR_4g008200 | 99.185 | 368 | 3 | 0 | 52 | 419 | 1 | 368 | 0.0 | 753 |
MS.gene38303.t1 | MTR_2g038320 | 50.236 | 424 | 200 | 7 | 3 | 419 | 4 | 423 | 5.40e-151 | 434 |
MS.gene38303.t1 | MTR_3g115220 | 27.714 | 350 | 201 | 11 | 78 | 389 | 103 | 438 | 1.11e-26 | 112 |
MS.gene38303.t1 | MTR_5g059260 | 27.011 | 348 | 204 | 9 | 87 | 389 | 158 | 500 | 4.58e-26 | 110 |
MS.gene38303.t1 | MTR_4g082310 | 26.023 | 342 | 203 | 12 | 86 | 388 | 97 | 427 | 2.16e-24 | 105 |
MS.gene38303.t1 | MTR_5g042200 | 27.190 | 331 | 192 | 14 | 86 | 378 | 85 | 404 | 2.17e-24 | 105 |
MS.gene38303.t1 | MTR_4g100810 | 27.729 | 339 | 199 | 12 | 86 | 389 | 108 | 435 | 2.18e-24 | 105 |
MS.gene38303.t1 | MTR_3g096020 | 27.548 | 363 | 195 | 15 | 63 | 378 | 164 | 505 | 5.73e-24 | 104 |
MS.gene38303.t1 | MTR_3g100310 | 25.469 | 373 | 207 | 13 | 72 | 378 | 85 | 452 | 6.87e-24 | 103 |
MS.gene38303.t1 | MTR_5g012770 | 27.647 | 340 | 191 | 13 | 84 | 389 | 122 | 440 | 8.82e-24 | 103 |
MS.gene38303.t1 | MTR_4g110030 | 26.050 | 357 | 212 | 15 | 71 | 387 | 103 | 447 | 1.18e-23 | 103 |
MS.gene38303.t1 | MTR_5g064620 | 25.442 | 452 | 248 | 19 | 5 | 389 | 12 | 441 | 1.36e-23 | 103 |
MS.gene38303.t1 | MTR_1g031590 | 23.575 | 386 | 237 | 11 | 63 | 396 | 125 | 504 | 2.01e-23 | 102 |
MS.gene38303.t1 | MTR_2g059350 | 25.356 | 351 | 200 | 14 | 83 | 387 | 112 | 446 | 9.43e-22 | 97.8 |
MS.gene38303.t1 | MTR_3g086570 | 23.002 | 413 | 257 | 13 | 48 | 407 | 104 | 508 | 1.57e-21 | 97.1 |
MS.gene38303.t1 | MTR_3g026650 | 25.272 | 368 | 206 | 15 | 72 | 389 | 153 | 501 | 5.54e-21 | 95.5 |
MS.gene38303.t1 | MTR_5g032100 | 24.444 | 360 | 202 | 12 | 84 | 378 | 84 | 438 | 5.80e-21 | 95.1 |
MS.gene38303.t1 | MTR_4g010990 | 25.434 | 346 | 222 | 9 | 70 | 387 | 56 | 393 | 4.89e-20 | 92.0 |
MS.gene38303.t1 | MTR_4g084570 | 23.580 | 352 | 220 | 8 | 70 | 378 | 135 | 480 | 8.23e-20 | 92.0 |
MS.gene38303.t1 | MTR_3g005340 | 24.576 | 354 | 216 | 10 | 70 | 378 | 130 | 477 | 1.06e-19 | 91.7 |
MS.gene38303.t1 | MTR_4g023030 | 24.259 | 371 | 225 | 12 | 63 | 389 | 203 | 561 | 3.03e-19 | 90.5 |
MS.gene38303.t1 | MTR_3g099480 | 24.185 | 368 | 215 | 14 | 63 | 384 | 115 | 464 | 4.35e-19 | 89.7 |
MS.gene38303.t1 | MTR_4g019210 | 24.862 | 362 | 216 | 12 | 75 | 389 | 207 | 559 | 1.14e-18 | 88.6 |
MS.gene38303.t1 | MTR_4g010990 | 26.299 | 308 | 194 | 7 | 105 | 387 | 5 | 304 | 2.87e-18 | 85.9 |
MS.gene38303.t1 | MTR_7g017330 | 25.271 | 277 | 144 | 8 | 81 | 306 | 93 | 357 | 8.49e-16 | 80.1 |
MS.gene38303.t1 | MTR_3g086570 | 22.256 | 328 | 199 | 11 | 48 | 322 | 104 | 428 | 1.38e-15 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38303.t1 | AT3G21190 | 63.208 | 424 | 149 | 3 | 1 | 419 | 1 | 422 | 0.0 | 561 |
MS.gene38303.t1 | AT1G51630 | 61.882 | 425 | 154 | 4 | 1 | 419 | 1 | 423 | 0.0 | 553 |
MS.gene38303.t1 | AT1G38065 | 26.648 | 349 | 206 | 9 | 86 | 389 | 26 | 369 | 1.61e-27 | 114 |
MS.gene38303.t1 | AT1G38065 | 26.648 | 349 | 206 | 9 | 86 | 389 | 36 | 379 | 1.85e-27 | 114 |
MS.gene38303.t1 | AT1G38131 | 26.648 | 349 | 206 | 9 | 86 | 389 | 155 | 498 | 3.42e-27 | 114 |
MS.gene38303.t1 | AT5G64600 | 27.586 | 406 | 231 | 14 | 26 | 389 | 60 | 444 | 7.38e-27 | 112 |
MS.gene38303.t1 | AT1G20550 | 27.520 | 367 | 215 | 13 | 78 | 411 | 101 | 449 | 2.51e-25 | 108 |
MS.gene38303.t1 | AT1G76270 | 28.529 | 340 | 200 | 12 | 83 | 389 | 103 | 432 | 7.28e-25 | 107 |
MS.gene38303.t1 | AT4G38390 | 26.239 | 343 | 210 | 10 | 81 | 389 | 118 | 451 | 3.60e-23 | 102 |
MS.gene38303.t1 | AT4G16650 | 28.446 | 341 | 198 | 11 | 84 | 389 | 120 | 449 | 5.27e-22 | 98.6 |
MS.gene38303.t1 | AT4G16650 | 28.446 | 341 | 198 | 11 | 84 | 389 | 120 | 449 | 5.27e-22 | 98.6 |
MS.gene38303.t1 | AT3G26370 | 23.430 | 414 | 256 | 12 | 48 | 408 | 112 | 517 | 8.31e-22 | 98.2 |
MS.gene38303.t1 | AT3G02250 | 25.287 | 348 | 198 | 14 | 83 | 384 | 103 | 434 | 1.70e-20 | 94.0 |
MS.gene38303.t1 | AT5G65470 | 23.177 | 384 | 223 | 13 | 63 | 378 | 60 | 439 | 3.00e-20 | 93.2 |
MS.gene38303.t1 | AT1G35510 | 24.791 | 359 | 221 | 9 | 64 | 378 | 136 | 489 | 6.85e-20 | 92.4 |
MS.gene38303.t1 | AT5G15740 | 24.629 | 337 | 206 | 13 | 87 | 384 | 107 | 434 | 8.22e-20 | 92.0 |
MS.gene38303.t1 | AT2G03280 | 25.000 | 340 | 208 | 12 | 86 | 387 | 88 | 418 | 1.01e-19 | 91.7 |
MS.gene38303.t1 | AT1G04910 | 24.074 | 378 | 229 | 14 | 75 | 413 | 81 | 439 | 1.52e-19 | 91.3 |
MS.gene38303.t1 | AT5G63390 | 23.775 | 408 | 236 | 16 | 63 | 412 | 134 | 524 | 4.26e-19 | 90.1 |
MS.gene38303.t1 | AT2G01480 | 21.564 | 422 | 274 | 10 | 8 | 378 | 69 | 484 | 5.57e-17 | 83.2 |
MS.gene38303.t1 | AT2G01480 | 21.564 | 422 | 274 | 10 | 8 | 378 | 69 | 484 | 1.09e-16 | 82.4 |
MS.gene38303.t1 | AT1G14970 | 22.198 | 464 | 296 | 14 | 8 | 412 | 70 | 527 | 3.38e-16 | 80.9 |
MS.gene38303.t1 | AT1G14970 | 23.077 | 403 | 251 | 12 | 63 | 412 | 11 | 407 | 4.10e-16 | 80.5 |
MS.gene38303.t1 | AT2G03280 | 23.433 | 367 | 207 | 13 | 86 | 387 | 88 | 445 | 7.19e-16 | 79.7 |
MS.gene38303.t1 | AT2G37980 | 23.097 | 381 | 245 | 15 | 45 | 389 | 185 | 553 | 2.73e-14 | 75.1 |
MS.gene38303.t1 | AT3G26370 | 24.138 | 232 | 157 | 6 | 48 | 263 | 112 | 340 | 5.71e-14 | 73.6 |
MS.gene38303.t1 | AT5G01100 | 21.467 | 368 | 233 | 12 | 63 | 389 | 191 | 543 | 1.58e-13 | 72.8 |
Find 90 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCCCTTTGATCTATAAAT+TGG | 0.210218 | 4.3:-87121930 | None:intergenic |
TTCTGGTAAAACACAAATAT+TGG | 0.269941 | 4.3:+87122871 | MS.gene38303:CDS |
CTTAGCAATGTATGGAAGTT+TGG | 0.306231 | 4.3:+87122031 | MS.gene38303:CDS |
ATTCAGAATCTTTAGAATCT+AGG | 0.306927 | 4.3:-87122748 | None:intergenic |
TACAAGGATAATAAATTTCC+AGG | 0.315137 | 4.3:+87120604 | MS.gene38303:intron |
TAATCTTCGGTAACCCGGTT+AGG | 0.354107 | 4.3:-87121888 | None:intergenic |
GACTTTCTCATGTTTATTGA+AGG | 0.356575 | 4.3:-87121975 | None:intergenic |
TCGACAAGATCATGTATTTC+CGG | 0.357773 | 4.3:-87122062 | None:intergenic |
ACACATGTAAGAAAGAATAT+AGG | 0.360475 | 4.3:+87120670 | MS.gene38303:CDS |
TTACTTGAACAGAATCAAAA+TGG | 0.369726 | 4.3:-87119537 | None:intergenic |
CTGCTGTGAAGGTCCCTAAC+CGG | 0.377281 | 4.3:+87121874 | MS.gene38303:CDS |
ATGCGAACGTAGCTGGTAAA+AGG | 0.377684 | 4.3:+87122843 | MS.gene38303:CDS |
TCAATAAACATGAGAAAGTC+AGG | 0.380362 | 4.3:+87121978 | MS.gene38303:CDS |
CACATGTAAGAAAGAATATA+GGG | 0.382191 | 4.3:+87120671 | MS.gene38303:CDS |
TGATAGCCTTGATTCTCTTA+AGG | 0.386325 | 4.3:+87122304 | MS.gene38303:CDS |
CATCATTATCATCATTTCCT+TGG | 0.387233 | 4.3:-87122181 | None:intergenic |
GTTGAGATGTTGAACAAGAA+AGG | 0.397949 | 4.3:+87122155 | MS.gene38303:CDS |
GAGAAAGATTGGTATTGATA+AGG | 0.398684 | 4.3:+87122247 | MS.gene38303:CDS |
AGATTCTAAAGATTCTGAAT+TGG | 0.399183 | 4.3:+87122751 | MS.gene38303:CDS |
TAAGAAAGAATATAGGGCTT+TGG | 0.414895 | 4.3:+87120677 | MS.gene38303:CDS |
ATTGCATGCTTAGCAATGTA+TGG | 0.415033 | 4.3:+87122023 | MS.gene38303:CDS |
AATCTCTTGTGCATTGAAAC+AGG | 0.427632 | 4.3:-87122213 | None:intergenic |
GATTTGAGACAAGTAGTTGC+TGG | 0.437086 | 4.3:+87119463 | MS.gene38303:CDS |
GGTTGGCTTCCTCTAATGTC+AGG | 0.452126 | 4.3:-87121597 | None:intergenic |
TTGAATGGTTTACCTGAGAT+AGG | 0.452979 | 4.3:-87120921 | None:intergenic |
CTATTGTATGCGAACGTAGC+TGG | 0.454060 | 4.3:+87122836 | MS.gene38303:CDS |
CCGTGTTGGGTTAAGCCGTC+TGG | 0.456324 | 4.3:+87120724 | MS.gene38303:CDS |
GCTGGTAAAAGGATCGGTTC+TGG | 0.458320 | 4.3:+87122854 | MS.gene38303:CDS |
CTTGTGATCCCTGACATTAG+AGG | 0.462574 | 4.3:+87121588 | MS.gene38303:CDS |
AGCCGATGAATCTGAAATTA+CGG | 0.462609 | 4.3:-87122900 | None:intergenic |
TGGACCATTGGTTAATGAAA+AGG | 0.468674 | 4.3:-87120890 | None:intergenic |
TACAATAGACCCGAAATTGC+TGG | 0.469638 | 4.3:-87122821 | None:intergenic |
CAATTTATTTGACACAATCA+AGG | 0.470225 | 4.3:+87122276 | MS.gene38303:CDS |
AACTTTGTCTTCTTATCCGC+CGG | 0.478466 | 4.3:-87122725 | None:intergenic |
TGACGAGTTAAAACCGTGTT+GGG | 0.478923 | 4.3:+87120711 | MS.gene38303:CDS |
CGAACCAATTTATAGATCAA+AGG | 0.484845 | 4.3:+87121926 | MS.gene38303:CDS |
GAACCAATTTATAGATCAAA+GGG | 0.484926 | 4.3:+87121927 | MS.gene38303:CDS |
GTTGCATCATCTGTTGATCC+TGG | 0.495630 | 4.3:-87120622 | None:intergenic |
CTATGTAATCTTCGGTAACC+CGG | 0.496129 | 4.3:-87121893 | None:intergenic |
ACATGATCTTGTCGACTCAA+TGG | 0.503901 | 4.3:+87122070 | MS.gene38303:CDS |
AGCCGTAATTTCAGATTCAT+CGG | 0.504226 | 4.3:+87122898 | MS.gene38303:CDS |
GACATTAGAGGAAGCCAACC+TGG | 0.505026 | 4.3:+87121600 | MS.gene38303:CDS |
AATCTTCGGTAACCCGGTTA+GGG | 0.507255 | 4.3:-87121887 | None:intergenic |
AGACGGTCAATTTATTGCTG+TGG | 0.514073 | 4.3:+87122124 | MS.gene38303:CDS |
TGGAAGTTTGGAGTTGCAGC+CGG | 0.514488 | 4.3:+87122043 | MS.gene38303:CDS |
TTGTCGACTCAATGGTTGAA+AGG | 0.530466 | 4.3:+87122078 | MS.gene38303:CDS |
AACCTATGAAAATGTAAAGA+TGG | 0.530585 | 4.3:+87120642 | MS.gene38303:CDS |
GTAATTGTGGCTAGATATCT+CGG | 0.530926 | 4.3:+87121558 | MS.gene38303:CDS |
TTCATGTCTCAGGAACTTTG+AGG | 0.534152 | 4.3:+87121758 | MS.gene38303:intron |
AAAGAATATAGGGCTTTGGA+AGG | 0.536631 | 4.3:+87120681 | MS.gene38303:CDS |
TGCTGTGAAGGTCCCTAACC+GGG | 0.540265 | 4.3:+87121875 | MS.gene38303:CDS |
GTGTCGAGCTATGTAATCTT+CGG | 0.540315 | 4.3:-87121901 | None:intergenic |
GATGAATCTGAAATTACGGC+TGG | 0.551992 | 4.3:-87122896 | None:intergenic |
TCCAGAGTACCACCTATCTC+AGG | 0.558813 | 4.3:+87120909 | MS.gene38303:CDS |
ACCTGAGATAGGTGGTACTC+TGG | 0.562659 | 4.3:-87120910 | None:intergenic |
CAAGGAAATGATGATAATGA+TGG | 0.567082 | 4.3:+87122182 | MS.gene38303:CDS |
TAGGTGGTACTCTGGACCAT+TGG | 0.568629 | 4.3:-87120902 | None:intergenic |
ACAGGTCCTTAAGAGAATCA+AGG | 0.568795 | 4.3:-87122310 | None:intergenic |
GATAGCAGATGCAGTAATTG+TGG | 0.569998 | 4.3:+87121545 | MS.gene38303:intron |
CTGACGAGTTAAAACCGTGT+TGG | 0.574512 | 4.3:+87120710 | MS.gene38303:CDS |
TTATTTGACACAATCAAGGT+GGG | 0.575583 | 4.3:+87122280 | MS.gene38303:CDS |
GACGAAGTGGAGCAGACAGA+CGG | 0.578720 | 4.3:+87120859 | MS.gene38303:intron |
GTTGGCTTCCTCTAATGTCA+GGG | 0.580467 | 4.3:-87121596 | None:intergenic |
ACGAAGTGGAGCAGACAGAC+GGG | 0.590735 | 4.3:+87120860 | MS.gene38303:CDS |
AACGTAGCTGGTAAAAGGAT+CGG | 0.594479 | 4.3:+87122848 | MS.gene38303:CDS |
CATGAAAAGCATGGAAGGAG+TGG | 0.595034 | 4.3:+87121803 | MS.gene38303:CDS |
TCGATGGTTGGCAGACGAAG+TGG | 0.598053 | 4.3:+87120846 | MS.gene38303:intron |
GTGTTCATGAAAAGCATGGA+AGG | 0.599368 | 4.3:+87121798 | MS.gene38303:CDS |
ATACATTGCTAAGCATGCAA+TGG | 0.603322 | 4.3:-87122021 | None:intergenic |
AGAACTAACCTCTTGTCACC+AGG | 0.607111 | 4.3:-87121618 | None:intergenic |
TTGAACAAGAAAGGTTGCCA+AGG | 0.610391 | 4.3:+87122164 | MS.gene38303:CDS |
CTAACCTCTTGTCACCAGGT+TGG | 0.610952 | 4.3:-87121614 | None:intergenic |
AATTTAATATTACCTCCAGA+CGG | 0.612585 | 4.3:-87120739 | None:intergenic |
ATAGATCAAAGGGAAACGTA+AGG | 0.616496 | 4.3:+87121937 | MS.gene38303:CDS |
TTTATTTGACACAATCAAGG+TGG | 0.619794 | 4.3:+87122279 | MS.gene38303:CDS |
GTTGCAGGAGTCAATCATGC+CGG | 0.628375 | 4.3:+87122706 | MS.gene38303:intron |
AAGAATATAGGGCTTTGGAA+GGG | 0.632512 | 4.3:+87120682 | MS.gene38303:CDS |
TAACAAACATAGTGAGAGTG+AGG | 0.633154 | 4.3:-87119489 | None:intergenic |
AATAACAAGAATATGCAAAG+TGG | 0.644534 | 4.3:-87122964 | None:intergenic |
GAAGCCAACCTGGTGACAAG+AGG | 0.647434 | 4.3:+87121610 | MS.gene38303:CDS |
CAATAAACATGAGAAAGTCA+GGG | 0.649727 | 4.3:+87121979 | MS.gene38303:CDS |
TGTTGGGTTAAGCCGTCTGG+AGG | 0.656915 | 4.3:+87120727 | MS.gene38303:CDS |
CATGGAAGGAGTGGTCAAAG+TGG | 0.657662 | 4.3:+87121812 | MS.gene38303:CDS |
GTTTCCTAAAACTTACACGA+AGG | 0.660480 | 4.3:+87122331 | MS.gene38303:CDS |
TGACGTGTTCATGAAAAGCA+TGG | 0.665989 | 4.3:+87121794 | MS.gene38303:CDS |
ACTTTAAGCCGAAAATCAGA+CGG | 0.668948 | 4.3:+87122107 | MS.gene38303:CDS |
AATGGTTTACCTGAGATAGG+TGG | 0.671281 | 4.3:-87120918 | None:intergenic |
GCAGGAGTCAATCATGCCGG+CGG | 0.677301 | 4.3:+87122709 | MS.gene38303:intron |
TGATTGTGTCAAATAAATTG+TGG | 0.680581 | 4.3:-87122273 | None:intergenic |
CCAGACGGCTTAACCCAACA+CGG | 0.681147 | 4.3:-87120724 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATATTGACTTTTTATATAT+AGG | + | chr4.3:87119996-87120015 | MS.gene38303:intron | 10.0% |
!! | AAGATAGATATTAGATAAAT+AGG | + | chr4.3:87120403-87120422 | MS.gene38303:intron | 15.0% |
!! | CTTAGATTGATTAATATATT+CGG | - | chr4.3:87120386-87120405 | None:intergenic | 15.0% |
!! | TTTGGATAAAAATGAAAAAT+GGG | - | chr4.3:87119565-87119584 | None:intergenic | 15.0% |
!! | TTTGTTCATAACAAAAAAAA+TGG | - | chr4.3:87119682-87119701 | None:intergenic | 15.0% |
!!! | AAAGTTAGTTAATTTTTTAG+GGG | + | chr4.3:87119699-87119718 | MS.gene38303:intron | 15.0% |
!!! | AAATGAATTTTAACTTTCAA+AGG | + | chr4.3:87119754-87119773 | MS.gene38303:intron | 15.0% |
!!! | ACAAAGTTAGTTAATTTTTT+AGG | + | chr4.3:87119697-87119716 | MS.gene38303:intron | 15.0% |
!!! | CAAAGTTAGTTAATTTTTTA+GGG | + | chr4.3:87119698-87119717 | MS.gene38303:intron | 15.0% |
!!! | GTCAATTATTTGTTTTATAT+AGG | - | chr4.3:87119950-87119969 | None:intergenic | 15.0% |
!! | AAAGTAGAGAAAATAAAGAA+TGG | - | chr4.3:87121471-87121490 | None:intergenic | 20.0% |
!! | AAAGTGAAAAATTGAAACTT+TGG | - | chr4.3:87119583-87119602 | None:intergenic | 20.0% |
!! | AAATTGTGTTAAATGTAAAG+TGG | - | chr4.3:87121244-87121263 | None:intergenic | 20.0% |
!! | CTTTACATTTAACACAATTT+AGG | + | chr4.3:87121244-87121263 | MS.gene38303:intron | 20.0% |
!! | CTTTGGATAAAAATGAAAAA+TGG | - | chr4.3:87119566-87119585 | None:intergenic | 20.0% |
!! | TAATAGATTCATATTGAAGT+GGG | - | chr4.3:87121220-87121239 | None:intergenic | 20.0% |
!! | TTAATAGATTCATATTGAAG+TGG | - | chr4.3:87121221-87121240 | None:intergenic | 20.0% |
!! | TTCTATATGAATCTCTTAAA+GGG | + | chr4.3:87119614-87119633 | MS.gene38303:intron | 20.0% |
!! | TTTCTATATGAATCTCTTAA+AGG | + | chr4.3:87119613-87119632 | MS.gene38303:intron | 20.0% |
!!! | AACAACAATCTATTTTTATC+GGG | - | chr4.3:87120316-87120335 | None:intergenic | 20.0% |
!!! | ATTAATTCATATTTTGTCGA+TGG | + | chr4.3:87120830-87120849 | MS.gene38303:intron | 20.0% |
!!! | CTTCAAGTTTATATCAATTT+TGG | - | chr4.3:87121136-87121155 | None:intergenic | 20.0% |
!!! | GAACAACAATCTATTTTTAT+CGG | - | chr4.3:87120317-87120336 | None:intergenic | 20.0% |
!!! | TTATTTGTTTTATATAGGAC+TGG | - | chr4.3:87119945-87119964 | None:intergenic | 20.0% |
! | AACCTATGAAAATGTAAAGA+TGG | + | chr4.3:87120642-87120661 | MS.gene38303:CDS | 25.0% |
! | AATAACAAGAATATGCAAAG+TGG | - | chr4.3:87122967-87122986 | None:intergenic | 25.0% |
! | AATTTAATATTACCTCCAGA+CGG | - | chr4.3:87120742-87120761 | None:intergenic | 25.0% |
! | ACACATGTAAGAAAGAATAT+AGG | + | chr4.3:87120670-87120689 | MS.gene38303:CDS | 25.0% |
! | ATTAGTGATGTAAGATATTG+CGG | + | chr4.3:87120984-87121003 | MS.gene38303:intron | 25.0% |
! | CAATTTATTTGACACAATCA+AGG | + | chr4.3:87122276-87122295 | MS.gene38303:CDS | 25.0% |
! | CACATGTAAGAAAGAATATA+GGG | + | chr4.3:87120671-87120690 | MS.gene38303:CDS | 25.0% |
! | GAACCAATTTATAGATCAAA+GGG | + | chr4.3:87121927-87121946 | MS.gene38303:CDS | 25.0% |
! | GCAAAAAAAGCTTCAAAATA+TGG | - | chr4.3:87121159-87121178 | None:intergenic | 25.0% |
! | GTCATTATTGTATATTTAGG+TGG | + | chr4.3:87121074-87121093 | MS.gene38303:intron | 25.0% |
! | TACAAGGATAATAAATTTCC+AGG | + | chr4.3:87120604-87120623 | MS.gene38303:intron | 25.0% |
! | TACATTTAACACAATTTAGG+TGG | + | chr4.3:87121247-87121266 | MS.gene38303:intron | 25.0% |
! | TCATTGAAATGATGATTTGA+AGG | + | chr4.3:87119886-87119905 | MS.gene38303:intron | 25.0% |
! | TGATTGTGTCAAATAAATTG+TGG | - | chr4.3:87122276-87122295 | None:intergenic | 25.0% |
! | TTACTTGAACAGAATCAAAA+TGG | - | chr4.3:87119540-87119559 | None:intergenic | 25.0% |
! | TTCTGGTAAAACACAAATAT+TGG | + | chr4.3:87122871-87122890 | MS.gene38303:CDS | 25.0% |
! | TTTCCCTTTGATCTATAAAT+TGG | - | chr4.3:87121933-87121952 | None:intergenic | 25.0% |
!! | AATAATGACACCATTTCTTT+TGG | - | chr4.3:87121063-87121082 | None:intergenic | 25.0% |
!! | AATGGTCTCTTTTAATCATA+TGG | - | chr4.3:87119522-87119541 | None:intergenic | 25.0% |
!! | ACAAGAAAATGTTTCTGATT+TGG | + | chr4.3:87120155-87120174 | MS.gene38303:intron | 25.0% |
!! | AGATTCTAAAGATTCTGAAT+TGG | + | chr4.3:87122751-87122770 | MS.gene38303:CDS | 25.0% |
!! | AGTCTTTTCATAACTATCAT+TGG | - | chr4.3:87121363-87121382 | None:intergenic | 25.0% |
!! | ATCAAAATGAGGATTTTTGT+TGG | + | chr4.3:87120960-87120979 | MS.gene38303:intron | 25.0% |
!! | ATCAAAATTTGCTTACTTTC+TGG | + | chr4.3:87122535-87122554 | MS.gene38303:intron | 25.0% |
!! | ATCCATCTTTACATTTTCAT+AGG | - | chr4.3:87120647-87120666 | None:intergenic | 25.0% |
!! | CAAATTTTACAATACTGCAT+TGG | - | chr4.3:87121439-87121458 | None:intergenic | 25.0% |
!! | CAAGTTTATATCAATTTTGG+AGG | - | chr4.3:87121133-87121152 | None:intergenic | 25.0% |
!! | GAGATATTAATTGTTTGTTG+TGG | + | chr4.3:87119852-87119871 | MS.gene38303:intron | 25.0% |
!! | TGACTTTTTATATATAGGAC+CGG | + | chr4.3:87120001-87120020 | MS.gene38303:intron | 25.0% |
!! | TGGGTTGAATAATTAATTTG+AGG | - | chr4.3:87121201-87121220 | None:intergenic | 25.0% |
!! | TTTATACACCGAATCTTTTA+TGG | - | chr4.3:87121646-87121665 | None:intergenic | 25.0% |
!! | TTTTGCTTATATTTCGTTCT+GGG | + | chr4.3:87121701-87121720 | MS.gene38303:intron | 25.0% |
!!! | ACAACAATCTATTTTTATCG+GGG | - | chr4.3:87120315-87120334 | None:intergenic | 25.0% |
!!! | ATTCAGAATCTTTAGAATCT+AGG | - | chr4.3:87122751-87122770 | None:intergenic | 25.0% |
!!! | GGTGTCATTATTGTATATTT+AGG | + | chr4.3:87121071-87121090 | MS.gene38303:intron | 25.0% |
!!! | TGAATGAATTGATTTTGTAG+AGG | - | chr4.3:87121278-87121297 | None:intergenic | 25.0% |
!!! | TTTTTAGTTGTTACATGAGA+AGG | - | chr4.3:87121849-87121868 | None:intergenic | 25.0% |
AAATACAATCCAAACGCATA+TGG | - | chr4.3:87120791-87120810 | None:intergenic | 30.0% | |
ACTACTACTAAGTTTGTGTT+TGG | - | chr4.3:87121325-87121344 | None:intergenic | 30.0% | |
AGAAGAAGGAAATCATCTAA+GGG | - | chr4.3:87121037-87121056 | None:intergenic | 30.0% | |
ATCTCCTAGTCTAAAAACTA+AGG | - | chr4.3:87119837-87119856 | None:intergenic | 30.0% | |
CAATAAACATGAGAAAGTCA+GGG | + | chr4.3:87121979-87121998 | MS.gene38303:CDS | 30.0% | |
CACATTCACGATCAATAATT+TGG | + | chr4.3:87121673-87121692 | MS.gene38303:intron | 30.0% | |
CATCATTATCATCATTTCCT+TGG | - | chr4.3:87122184-87122203 | None:intergenic | 30.0% | |
CATCTAAGGGAAAATATCTA+TGG | - | chr4.3:87121024-87121043 | None:intergenic | 30.0% | |
CCTAATATAATTCATGTCTC+AGG | + | chr4.3:87121748-87121767 | MS.gene38303:intron | 30.0% | |
CCTGAGACATGAATTATATT+AGG | - | chr4.3:87121751-87121770 | None:intergenic | 30.0% | |
CGAACCAATTTATAGATCAA+AGG | + | chr4.3:87121926-87121945 | MS.gene38303:CDS | 30.0% | |
GACTTTCTCATGTTTATTGA+AGG | - | chr4.3:87121978-87121997 | None:intergenic | 30.0% | |
TAAAAAAATTGCTGCTGTGA+AGG | + | chr4.3:87121863-87121882 | MS.gene38303:CDS | 30.0% | |
TAAGAAAGAATATAGGGCTT+TGG | + | chr4.3:87120677-87120696 | MS.gene38303:CDS | 30.0% | |
TCAATAAACATGAGAAAGTC+AGG | + | chr4.3:87121978-87121997 | MS.gene38303:CDS | 30.0% | |
TGTATATTTAGGTGGATGTT+TGG | + | chr4.3:87121082-87121101 | MS.gene38303:intron | 30.0% | |
TTATTTGACACAATCAAGGT+GGG | + | chr4.3:87122280-87122299 | MS.gene38303:CDS | 30.0% | |
TTTATTTGACACAATCAAGG+TGG | + | chr4.3:87122279-87122298 | MS.gene38303:CDS | 30.0% | |
TTTCCTCTTAAAAATGTTGC+AGG | + | chr4.3:87122691-87122710 | MS.gene38303:intron | 30.0% | |
TTTGCTTATATTTCGTTCTG+GGG | + | chr4.3:87121702-87121721 | MS.gene38303:intron | 30.0% | |
! | AGTTCTGACCATAAAAGATT+CGG | + | chr4.3:87121635-87121654 | MS.gene38303:intron | 30.0% |
! | ATATGCAAAGTGGTTTTTCT+TGG | - | chr4.3:87122957-87122976 | None:intergenic | 30.0% |
! | ATTCATATTTTGTCGATGGT+TGG | + | chr4.3:87120834-87120853 | MS.gene38303:intron | 30.0% |
! | CAAGGAAATGATGATAATGA+TGG | + | chr4.3:87122182-87122201 | MS.gene38303:CDS | 30.0% |
! | GGTTTTTCTTGGAGATATAA+GGG | - | chr4.3:87122946-87122965 | None:intergenic | 30.0% |
! | GTGATTGACTTATCAAAATG+AGG | + | chr4.3:87120949-87120968 | MS.gene38303:intron | 30.0% |
! | GTTACCTTTTCATTAACCAA+TGG | + | chr4.3:87120886-87120905 | MS.gene38303:CDS | 30.0% |
! | GTTTTGCTTATATTTCGTTC+TGG | + | chr4.3:87121700-87121719 | MS.gene38303:intron | 30.0% |
! | GTTTTTCTTGGAGATATAAG+GGG | - | chr4.3:87122945-87122964 | None:intergenic | 30.0% |
! | TAAATTGACCGTCTGATTTT+CGG | - | chr4.3:87122118-87122137 | None:intergenic | 30.0% |
! | TGGTTTTTCTTGGAGATATA+AGG | - | chr4.3:87122947-87122966 | None:intergenic | 30.0% |
! | TTAAGTTTTGCAACTTTTCG+AGG | + | chr4.3:87120762-87120781 | MS.gene38303:intron | 30.0% |
! | TTTCTCATCGTATTTTCTCT+CGG | + | chr4.3:87120461-87120480 | MS.gene38303:intron | 30.0% |
! | TTTTATATATAGGACCGGAT+GGG | + | chr4.3:87120006-87120025 | MS.gene38303:intron | 30.0% |
! | TTTTTATATATAGGACCGGA+TGG | + | chr4.3:87120005-87120024 | MS.gene38303:intron | 30.0% |
!! | AGATCCTTAGTTTTTAGACT+AGG | + | chr4.3:87119830-87119849 | MS.gene38303:intron | 30.0% |
!! | GAGAAAGATTGGTATTGATA+AGG | + | chr4.3:87122247-87122266 | MS.gene38303:CDS | 30.0% |
!! | TGTTTTTGTACCAGCAATTT+CGG | + | chr4.3:87122811-87122830 | MS.gene38303:CDS | 30.0% |
!! | TTGTTTTATATAGGACTGGA+GGG | - | chr4.3:87119941-87119960 | None:intergenic | 30.0% |
!!! | CTCTTTGTTTTTGCTTTACA+AGG | + | chr4.3:87120588-87120607 | MS.gene38303:intron | 30.0% |
!!! | GCTCTATGTCTGAATTTTTT+TGG | + | chr4.3:87120132-87120151 | MS.gene38303:intron | 30.0% |
!!! | TAAGTTTGTGTTTGGTTTTG+CGG | - | chr4.3:87121317-87121336 | None:intergenic | 30.0% |
!!! | TTTGTTTTATATAGGACTGG+AGG | - | chr4.3:87119942-87119961 | None:intergenic | 30.0% |
AACAGGGAAATGGAAAATGA+AGG | - | chr4.3:87121494-87121513 | None:intergenic | 35.0% | |
AATCTCTTGTGCATTGAAAC+AGG | - | chr4.3:87122216-87122235 | None:intergenic | 35.0% | |
ACTTTAAGCCGAAAATCAGA+CGG | + | chr4.3:87122107-87122126 | MS.gene38303:CDS | 35.0% | |
AGACTATTCAAATGTGTGTG+CGG | - | chr4.3:87122635-87122654 | None:intergenic | 35.0% | |
AGCCGTAATTTCAGATTCAT+CGG | + | chr4.3:87122898-87122917 | MS.gene38303:CDS | 35.0% | |
AGTCAATCACAACGATTGAA+TGG | - | chr4.3:87120939-87120958 | None:intergenic | 35.0% | |
ATACATTGCTAAGCATGCAA+TGG | - | chr4.3:87122024-87122043 | None:intergenic | 35.0% | |
ATAGATCAAAGGGAAACGTA+AGG | + | chr4.3:87121937-87121956 | MS.gene38303:CDS | 35.0% | |
ATGAGAAAGTCAGGGAAAAA+AGG | + | chr4.3:87121987-87122006 | MS.gene38303:CDS | 35.0% | |
ATTGCATGCTTAGCAATGTA+TGG | + | chr4.3:87122023-87122042 | MS.gene38303:CDS | 35.0% | |
ATTTGGACAGTGATACTGAT+AGG | + | chr4.3:87120034-87120053 | MS.gene38303:intron | 35.0% | |
CAACAACTATACTAGAGTCT+AGG | - | chr4.3:87120068-87120087 | None:intergenic | 35.0% | |
CTTAGCAATGTATGGAAGTT+TGG | + | chr4.3:87122031-87122050 | MS.gene38303:CDS | 35.0% | |
GAGAAGAAGGAAATCATCTA+AGG | - | chr4.3:87121038-87121057 | None:intergenic | 35.0% | |
GCTCCATGGTTCAATTAAAA+CGG | - | chr4.3:87120361-87120380 | None:intergenic | 35.0% | |
GTAATTGTGGCTAGATATCT+CGG | + | chr4.3:87121558-87121577 | MS.gene38303:CDS | 35.0% | |
GTTGAGATGTTGAACAAGAA+AGG | + | chr4.3:87122155-87122174 | MS.gene38303:CDS | 35.0% | |
GTTTCCTAAAACTTACACGA+AGG | + | chr4.3:87122331-87122350 | MS.gene38303:CDS | 35.0% | |
TAACAAACATAGTGAGAGTG+AGG | - | chr4.3:87119492-87119511 | None:intergenic | 35.0% | |
TATCTGGACATGAAGCATAT+TGG | - | chr4.3:87121529-87121548 | None:intergenic | 35.0% | |
TCGACAAGATCATGTATTTC+CGG | - | chr4.3:87122065-87122084 | None:intergenic | 35.0% | |
TGGTACAAAAACATCACTCT+CGG | - | chr4.3:87122804-87122823 | None:intergenic | 35.0% | |
TTCTTCTCCACCAAAAGAAA+TGG | + | chr4.3:87121050-87121069 | MS.gene38303:intron | 35.0% | |
TTGAATGGTTTACCTGAGAT+AGG | - | chr4.3:87120924-87120943 | None:intergenic | 35.0% | |
TTGCTTATATTTCGTTCTGG+GGG | + | chr4.3:87121703-87121722 | MS.gene38303:intron | 35.0% | |
TTTATATATAGGACCGGATG+GGG | + | chr4.3:87120007-87120026 | MS.gene38303:intron | 35.0% | |
! | AAACGGTGTTTTTCGTTCAA+AGG | - | chr4.3:87120344-87120363 | None:intergenic | 35.0% |
! | AATGACACCATTTCTTTTGG+TGG | - | chr4.3:87121060-87121079 | None:intergenic | 35.0% |
! | AGCCGATGAATCTGAAATTA+CGG | - | chr4.3:87122903-87122922 | None:intergenic | 35.0% |
! | ATTTCTTTTGGTGGAGAAGA+AGG | - | chr4.3:87121051-87121070 | None:intergenic | 35.0% |
! | GTTTTTGTACCAGCAATTTC+GGG | + | chr4.3:87122812-87122831 | MS.gene38303:CDS | 35.0% |
! | TGATAGCCTTGATTCTCTTA+AGG | + | chr4.3:87122304-87122323 | MS.gene38303:CDS | 35.0% |
! | TGGACCATTGGTTAATGAAA+AGG | - | chr4.3:87120893-87120912 | None:intergenic | 35.0% |
!! | AAAGAATATAGGGCTTTGGA+AGG | + | chr4.3:87120681-87120700 | MS.gene38303:CDS | 35.0% |
!! | AAGAATATAGGGCTTTGGAA+GGG | + | chr4.3:87120682-87120701 | MS.gene38303:CDS | 35.0% |
!! | ACTCCTGCAACATTTTTAAG+AGG | - | chr4.3:87122697-87122716 | None:intergenic | 35.0% |
!! | GATTTGCTAACTGTGTGAAT+GGG | - | chr4.3:87122450-87122469 | None:intergenic | 35.0% |
!! | GCAGTGTTTTTGAGAAAGAT+TGG | + | chr4.3:87122236-87122255 | MS.gene38303:CDS | 35.0% |
!! | TACAATACTGCATTGGCTTA+AGG | - | chr4.3:87121432-87121451 | None:intergenic | 35.0% |
!!! | AATCTATTTTTATCGGGGAG+GGG | - | chr4.3:87120310-87120329 | None:intergenic | 35.0% |
!!! | ACAATCTATTTTTATCGGGG+AGG | - | chr4.3:87120312-87120331 | None:intergenic | 35.0% |
!!! | ACACCGTTTTAATTGAACCA+TGG | + | chr4.3:87120355-87120374 | MS.gene38303:intron | 35.0% |
!!! | CAATCTATTTTTATCGGGGA+GGG | - | chr4.3:87120311-87120330 | None:intergenic | 35.0% |
!!! | TCGTGTAAGTTTTAGGAAAC+AGG | - | chr4.3:87122331-87122350 | None:intergenic | 35.0% |
AACGTAGCTGGTAAAAGGAT+CGG | + | chr4.3:87122848-87122867 | MS.gene38303:CDS | 40.0% | |
AACTTTGTCTTCTTATCCGC+CGG | - | chr4.3:87122728-87122747 | None:intergenic | 40.0% | |
AATGGTTTACCTGAGATAGG+TGG | - | chr4.3:87120921-87120940 | None:intergenic | 40.0% | |
ACAGGTCCTTAAGAGAATCA+AGG | - | chr4.3:87122313-87122332 | None:intergenic | 40.0% | |
ACGAAAGAAGAACAGGGAAA+TGG | - | chr4.3:87121504-87121523 | None:intergenic | 40.0% | |
AGACGGTCAATTTATTGCTG+TGG | + | chr4.3:87122124-87122143 | MS.gene38303:CDS | 40.0% | |
CAATTACTGCATCTGCTATC+TGG | - | chr4.3:87121545-87121564 | None:intergenic | 40.0% | |
CTATGTAATCTTCGGTAACC+CGG | - | chr4.3:87121896-87121915 | None:intergenic | 40.0% | |
GACTATTCAAATGTGTGTGC+GGG | - | chr4.3:87122634-87122653 | None:intergenic | 40.0% | |
GATAGCAGATGCAGTAATTG+TGG | + | chr4.3:87121545-87121564 | MS.gene38303:intron | 40.0% | |
GTCGTAGGATTGAGATAAGA+CGG | + | chr4.3:87122474-87122493 | MS.gene38303:intron | 40.0% | |
GTGTCGAGCTATGTAATCTT+CGG | - | chr4.3:87121904-87121923 | None:intergenic | 40.0% | |
TAATATATTCGGCAGCTCCA+TGG | - | chr4.3:87120375-87120394 | None:intergenic | 40.0% | |
TACAATAGACCCGAAATTGC+TGG | - | chr4.3:87122824-87122843 | None:intergenic | 40.0% | |
TCACACAGTTAGCAAATCGA+TGG | + | chr4.3:87122452-87122471 | MS.gene38303:intron | 40.0% | |
TGACGAGTTAAAACCGTGTT+GGG | + | chr4.3:87120711-87120730 | MS.gene38303:CDS | 40.0% | |
TGACGTGTTCATGAAAAGCA+TGG | + | chr4.3:87121794-87121813 | MS.gene38303:CDS | 40.0% | |
TGTCCAAATTATACCCCATC+CGG | - | chr4.3:87120023-87120042 | None:intergenic | 40.0% | |
TTCATGTCTCAGGAACTTTG+AGG | + | chr4.3:87121758-87121777 | MS.gene38303:intron | 40.0% | |
TTGAACAAGAAAGGTTGCCA+AGG | + | chr4.3:87122164-87122183 | MS.gene38303:CDS | 40.0% | |
! | ATGCAAGTGCTTTTCTGATC+TGG | + | chr4.3:87120500-87120519 | MS.gene38303:intron | 40.0% |
! | CTCACCTTCGTGTAAGTTTT+AGG | - | chr4.3:87122338-87122357 | None:intergenic | 40.0% |
! | GATGAATCTGAAATTACGGC+TGG | - | chr4.3:87122899-87122918 | None:intergenic | 40.0% |
! | GATTTGAGACAAGTAGTTGC+TGG | + | chr4.3:87119463-87119482 | MS.gene38303:CDS | 40.0% |
! | GTGTTCATGAAAAGCATGGA+AGG | + | chr4.3:87121798-87121817 | MS.gene38303:CDS | 40.0% |
! | TGCTTATATTTCGTTCTGGG+GGG | + | chr4.3:87121704-87121723 | MS.gene38303:intron | 40.0% |
!! | ACATGATCTTGTCGACTCAA+TGG | + | chr4.3:87122070-87122089 | MS.gene38303:CDS | 40.0% |
!! | AGGGGAAATTTGTTAGTAGC+AGG | - | chr4.3:87120292-87120311 | None:intergenic | 40.0% |
!! | ATTGGTGACGAAAGAAGAAC+AGG | - | chr4.3:87121511-87121530 | None:intergenic | 40.0% |
!! | CGATTTGCTAACTGTGTGAA+TGG | - | chr4.3:87122451-87122470 | None:intergenic | 40.0% |
!! | GGGGAAATTTGTTAGTAGCA+GGG | - | chr4.3:87120291-87120310 | None:intergenic | 40.0% |
!! | TTGGTGACGAAAGAAGAACA+GGG | - | chr4.3:87121510-87121529 | None:intergenic | 40.0% |
!! | TTGTCGACTCAATGGTTGAA+AGG | + | chr4.3:87122078-87122097 | MS.gene38303:CDS | 40.0% |
AATCTTCGGTAACCCGGTTA+GGG | - | chr4.3:87121890-87121909 | None:intergenic | 45.0% | |
AGAACTAACCTCTTGTCACC+AGG | - | chr4.3:87121621-87121640 | None:intergenic | 45.0% | |
ATACCACTGAGCTACACCTT+CGG | - | chr4.3:87120235-87120254 | None:intergenic | 45.0% | |
ATGCGAACGTAGCTGGTAAA+AGG | + | chr4.3:87122843-87122862 | MS.gene38303:CDS | 45.0% | |
CTATTGTATGCGAACGTAGC+TGG | + | chr4.3:87122836-87122855 | MS.gene38303:CDS | 45.0% | |
CTGACGAGTTAAAACCGTGT+TGG | + | chr4.3:87120710-87120729 | MS.gene38303:CDS | 45.0% | |
CTGGGGGGGAATATAATTCA+TGG | + | chr4.3:87121719-87121738 | MS.gene38303:intron | 45.0% | |
CTTGTGATCCCTGACATTAG+AGG | + | chr4.3:87121588-87121607 | MS.gene38303:CDS | 45.0% | |
GATCGTTGGATGAGATCAGA+CGG | - | chr4.3:87122562-87122581 | None:intergenic | 45.0% | |
GTAGCTCAGTGGTATCAGTT+TGG | + | chr4.3:87120240-87120259 | MS.gene38303:intron | 45.0% | |
GTCAGCAGATTAGTGATCGT+TGG | - | chr4.3:87122576-87122595 | None:intergenic | 45.0% | |
GTTAGCAAATCGATGGTCGT+AGG | + | chr4.3:87122459-87122478 | MS.gene38303:intron | 45.0% | |
GTTGCATCATCTGTTGATCC+TGG | - | chr4.3:87120625-87120644 | None:intergenic | 45.0% | |
TAATCTTCGGTAACCCGGTT+AGG | - | chr4.3:87121891-87121910 | None:intergenic | 45.0% | |
TGCTAACTGTGTGAATGGGT+GGG | - | chr4.3:87122446-87122465 | None:intergenic | 45.0% | |
TGGTGTGAGTTTGTGATTGC+AGG | + | chr4.3:87122598-87122617 | MS.gene38303:intron | 45.0% | |
TTGCTAACTGTGTGAATGGG+TGG | - | chr4.3:87122447-87122466 | None:intergenic | 45.0% | |
! | CATGAAAAGCATGGAAGGAG+TGG | + | chr4.3:87121803-87121822 | MS.gene38303:CDS | 45.0% |
! | GATCACTAATCTGCTGACTG+TGG | + | chr4.3:87122578-87122597 | MS.gene38303:intron | 45.0% |
! | GTTGGCTTCCTCTAATGTCA+GGG | - | chr4.3:87121599-87121618 | None:intergenic | 45.0% |
!! | GCTTATATTTCGTTCTGGGG+GGG | + | chr4.3:87121705-87121724 | MS.gene38303:intron | 45.0% |
ACCTGAGATAGGTGGTACTC+TGG | - | chr4.3:87120913-87120932 | None:intergenic | 50.0% | |
ATGAGCACACGCACACACAT+GGG | + | chr4.3:87122397-87122416 | MS.gene38303:intron | 50.0% | |
ATGGGTGGGATTGTAACTGC+AGG | - | chr4.3:87122432-87122451 | None:intergenic | 50.0% | |
CATGGAAGGAGTGGTCAAAG+TGG | + | chr4.3:87121812-87121831 | MS.gene38303:CDS | 50.0% | |
CTAACCTCTTGTCACCAGGT+TGG | - | chr4.3:87121617-87121636 | None:intergenic | 50.0% | |
GACATTAGAGGAAGCCAACC+TGG | + | chr4.3:87121600-87121619 | MS.gene38303:CDS | 50.0% | |
GATCGAACCCTGGACTCAAT+CGG | - | chr4.3:87120269-87120288 | None:intergenic | 50.0% | |
GGACCGGATGGGGTATAATT+TGG | + | chr4.3:87120017-87120036 | MS.gene38303:intron | 50.0% | |
GTTGCAGGAGTCAATCATGC+CGG | + | chr4.3:87122706-87122725 | MS.gene38303:intron | 50.0% | |
TACCACTGAGCTACACCTTC+GGG | - | chr4.3:87120234-87120253 | None:intergenic | 50.0% | |
TAGGTGGTACTCTGGACCAT+TGG | - | chr4.3:87120905-87120924 | None:intergenic | 50.0% | |
TCGAGGAAGCCATATGCGTT+TGG | + | chr4.3:87120779-87120798 | MS.gene38303:intron | 50.0% | |
! | GCTGGTAAAAGGATCGGTTC+TGG | + | chr4.3:87122854-87122873 | MS.gene38303:CDS | 50.0% |
! | TCCAGAGTACCACCTATCTC+AGG | + | chr4.3:87120909-87120928 | MS.gene38303:CDS | 50.0% |
! | TGGAAGTTTGGAGTTGCAGC+CGG | + | chr4.3:87122043-87122062 | MS.gene38303:CDS | 50.0% |
! | TTGGACACCGATTGAGTCCA+GGG | + | chr4.3:87120259-87120278 | MS.gene38303:intron | 50.0% |
! | TTTGGACACCGATTGAGTCC+AGG | + | chr4.3:87120258-87120277 | MS.gene38303:intron | 50.0% |
!! | GGTTGGCTTCCTCTAATGTC+AGG | - | chr4.3:87121600-87121619 | None:intergenic | 50.0% |
ACCACTGAGCTACACCTTCG+GGG | - | chr4.3:87120233-87120252 | None:intergenic | 55.0% | |
ACGAAGTGGAGCAGACAGAC+GGG | + | chr4.3:87120860-87120879 | MS.gene38303:CDS | 55.0% | |
CACACGCACACACATGGGTT+TGG | + | chr4.3:87122402-87122421 | MS.gene38303:intron | 55.0% | |
CATGAGCACACGCACACACA+TGG | + | chr4.3:87122396-87122415 | MS.gene38303:intron | 55.0% | |
CCAGACGGCTTAACCCAACA+CGG | - | chr4.3:87120727-87120746 | None:intergenic | 55.0% | |
CTGCTGTGAAGGTCCCTAAC+CGG | + | chr4.3:87121874-87121893 | MS.gene38303:CDS | 55.0% | |
GAAGCCAACCTGGTGACAAG+AGG | + | chr4.3:87121610-87121629 | MS.gene38303:CDS | 55.0% | |
GACGAAGTGGAGCAGACAGA+CGG | + | chr4.3:87120859-87120878 | MS.gene38303:intron | 55.0% | |
GTTTGTCCTTGTGTCCCCGA+AGG | + | chr4.3:87120216-87120235 | MS.gene38303:intron | 55.0% | |
TAGTAGCAGGGATCGAACCC+TGG | - | chr4.3:87120279-87120298 | None:intergenic | 55.0% | |
TCGATGGTTGGCAGACGAAG+TGG | + | chr4.3:87120846-87120865 | MS.gene38303:intron | 55.0% | |
TGCTGTGAAGGTCCCTAACC+GGG | + | chr4.3:87121875-87121894 | MS.gene38303:CDS | 55.0% | |
TGTTGGGTTAAGCCGTCTGG+AGG | + | chr4.3:87120727-87120746 | MS.gene38303:CDS | 55.0% | |
CCGTGTTGGGTTAAGCCGTC+TGG | + | chr4.3:87120724-87120743 | MS.gene38303:CDS | 60.0% | |
GCAGGAGTCAATCATGCCGG+CGG | + | chr4.3:87122709-87122728 | MS.gene38303:intron | 60.0% | |
GCTACACCTTCGGGGACACA+AGG | - | chr4.3:87120225-87120244 | None:intergenic | 60.0% | |
! | TCCCCGAAGGTGTAGCTCAG+TGG | + | chr4.3:87120229-87120248 | MS.gene38303:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 87119454 | 87122991 | 87119454 | ID=MS.gene38303 |
chr4.3 | mRNA | 87119454 | 87122991 | 87119454 | ID=MS.gene38303.t1;Parent=MS.gene38303 |
chr4.3 | exon | 87119454 | 87119555 | 87119454 | ID=MS.gene38303.t1.exon1;Parent=MS.gene38303.t1 |
chr4.3 | CDS | 87119454 | 87119555 | 87119454 | ID=cds.MS.gene38303.t1;Parent=MS.gene38303.t1 |
chr4.3 | exon | 87120610 | 87120748 | 87120610 | ID=MS.gene38303.t1.exon2;Parent=MS.gene38303.t1 |
chr4.3 | CDS | 87120610 | 87120748 | 87120610 | ID=cds.MS.gene38303.t1;Parent=MS.gene38303.t1 |
chr4.3 | exon | 87120860 | 87120930 | 87120860 | ID=MS.gene38303.t1.exon3;Parent=MS.gene38303.t1 |
chr4.3 | CDS | 87120860 | 87120930 | 87120860 | ID=cds.MS.gene38303.t1;Parent=MS.gene38303.t1 |
chr4.3 | exon | 87121546 | 87121631 | 87121546 | ID=MS.gene38303.t1.exon4;Parent=MS.gene38303.t1 |
chr4.3 | CDS | 87121546 | 87121631 | 87121546 | ID=cds.MS.gene38303.t1;Parent=MS.gene38303.t1 |
chr4.3 | exon | 87121770 | 87122352 | 87121770 | ID=MS.gene38303.t1.exon5;Parent=MS.gene38303.t1 |
chr4.3 | CDS | 87121770 | 87122352 | 87121770 | ID=cds.MS.gene38303.t1;Parent=MS.gene38303.t1 |
chr4.3 | exon | 87122713 | 87122991 | 87122713 | ID=MS.gene38303.t1.exon6;Parent=MS.gene38303.t1 |
chr4.3 | CDS | 87122713 | 87122991 | 87122713 | ID=cds.MS.gene38303.t1;Parent=MS.gene38303.t1 |
Gene Sequence |
Protein sequence |