Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034151.t1 | XP_013454584.1 | 99 | 419 | 4 | 0 | 1 | 419 | 1 | 419 | 5.10E-236 | 826.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034151.t1 | Q9LU40 | 63.2 | 424 | 149 | 3 | 1 | 419 | 1 | 422 | 3.0e-152 | 539.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034151.t1 | A0A072URW6 | 99.0 | 419 | 4 | 0 | 1 | 419 | 1 | 419 | 3.7e-236 | 826.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034151 | MS.gene83787 | PPI |
| MS.gene87552 | MS.gene034151 | PPI |
| MS.gene034151 | MS.gene93583 | PPI |
| MS.gene034151 | MS.gene79356 | PPI |
| MS.gene034151 | MS.gene066643 | PPI |
| MS.gene034151 | MS.gene50341 | PPI |
| MS.gene034151 | MS.gene28256 | PPI |
| MS.gene034151 | MS.gene064122 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034151.t1 | MTR_4g008200 | 99.045 | 419 | 4 | 0 | 1 | 419 | 1 | 419 | 0.0 | 857 |
| MS.gene034151.t1 | MTR_4g008200 | 99.185 | 368 | 3 | 0 | 52 | 419 | 1 | 368 | 0.0 | 753 |
| MS.gene034151.t1 | MTR_2g038320 | 50.236 | 424 | 200 | 7 | 3 | 419 | 4 | 423 | 5.40e-151 | 434 |
| MS.gene034151.t1 | MTR_3g115220 | 27.714 | 350 | 201 | 11 | 78 | 389 | 103 | 438 | 1.11e-26 | 112 |
| MS.gene034151.t1 | MTR_5g059260 | 27.011 | 348 | 204 | 9 | 87 | 389 | 158 | 500 | 4.58e-26 | 110 |
| MS.gene034151.t1 | MTR_4g082310 | 26.023 | 342 | 203 | 12 | 86 | 388 | 97 | 427 | 2.16e-24 | 105 |
| MS.gene034151.t1 | MTR_5g042200 | 27.190 | 331 | 192 | 14 | 86 | 378 | 85 | 404 | 2.17e-24 | 105 |
| MS.gene034151.t1 | MTR_4g100810 | 27.729 | 339 | 199 | 12 | 86 | 389 | 108 | 435 | 2.18e-24 | 105 |
| MS.gene034151.t1 | MTR_3g096020 | 27.548 | 363 | 195 | 15 | 63 | 378 | 164 | 505 | 5.73e-24 | 104 |
| MS.gene034151.t1 | MTR_3g100310 | 25.469 | 373 | 207 | 13 | 72 | 378 | 85 | 452 | 6.87e-24 | 103 |
| MS.gene034151.t1 | MTR_5g012770 | 27.647 | 340 | 191 | 13 | 84 | 389 | 122 | 440 | 8.82e-24 | 103 |
| MS.gene034151.t1 | MTR_4g110030 | 26.050 | 357 | 212 | 15 | 71 | 387 | 103 | 447 | 1.18e-23 | 103 |
| MS.gene034151.t1 | MTR_5g064620 | 25.442 | 452 | 248 | 19 | 5 | 389 | 12 | 441 | 1.36e-23 | 103 |
| MS.gene034151.t1 | MTR_1g031590 | 23.575 | 386 | 237 | 11 | 63 | 396 | 125 | 504 | 2.01e-23 | 102 |
| MS.gene034151.t1 | MTR_2g059350 | 25.356 | 351 | 200 | 14 | 83 | 387 | 112 | 446 | 9.43e-22 | 97.8 |
| MS.gene034151.t1 | MTR_3g086570 | 23.002 | 413 | 257 | 13 | 48 | 407 | 104 | 508 | 1.57e-21 | 97.1 |
| MS.gene034151.t1 | MTR_3g026650 | 25.272 | 368 | 206 | 15 | 72 | 389 | 153 | 501 | 5.54e-21 | 95.5 |
| MS.gene034151.t1 | MTR_5g032100 | 24.444 | 360 | 202 | 12 | 84 | 378 | 84 | 438 | 5.80e-21 | 95.1 |
| MS.gene034151.t1 | MTR_4g010990 | 25.434 | 346 | 222 | 9 | 70 | 387 | 56 | 393 | 4.89e-20 | 92.0 |
| MS.gene034151.t1 | MTR_4g084570 | 23.580 | 352 | 220 | 8 | 70 | 378 | 135 | 480 | 8.23e-20 | 92.0 |
| MS.gene034151.t1 | MTR_3g005340 | 24.576 | 354 | 216 | 10 | 70 | 378 | 130 | 477 | 1.06e-19 | 91.7 |
| MS.gene034151.t1 | MTR_4g023030 | 24.259 | 371 | 225 | 12 | 63 | 389 | 203 | 561 | 3.03e-19 | 90.5 |
| MS.gene034151.t1 | MTR_3g099480 | 24.185 | 368 | 215 | 14 | 63 | 384 | 115 | 464 | 4.35e-19 | 89.7 |
| MS.gene034151.t1 | MTR_4g019210 | 24.862 | 362 | 216 | 12 | 75 | 389 | 207 | 559 | 1.14e-18 | 88.6 |
| MS.gene034151.t1 | MTR_4g010990 | 26.299 | 308 | 194 | 7 | 105 | 387 | 5 | 304 | 2.87e-18 | 85.9 |
| MS.gene034151.t1 | MTR_7g017330 | 25.271 | 277 | 144 | 8 | 81 | 306 | 93 | 357 | 8.49e-16 | 80.1 |
| MS.gene034151.t1 | MTR_3g086570 | 22.256 | 328 | 199 | 11 | 48 | 322 | 104 | 428 | 1.38e-15 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034151.t1 | AT3G21190 | 63.208 | 424 | 149 | 3 | 1 | 419 | 1 | 422 | 0.0 | 561 |
| MS.gene034151.t1 | AT1G51630 | 61.882 | 425 | 154 | 4 | 1 | 419 | 1 | 423 | 0.0 | 553 |
| MS.gene034151.t1 | AT1G38065 | 26.648 | 349 | 206 | 9 | 86 | 389 | 26 | 369 | 1.61e-27 | 114 |
| MS.gene034151.t1 | AT1G38065 | 26.648 | 349 | 206 | 9 | 86 | 389 | 36 | 379 | 1.85e-27 | 114 |
| MS.gene034151.t1 | AT1G38131 | 26.648 | 349 | 206 | 9 | 86 | 389 | 155 | 498 | 3.42e-27 | 114 |
| MS.gene034151.t1 | AT5G64600 | 27.586 | 406 | 231 | 14 | 26 | 389 | 60 | 444 | 7.38e-27 | 112 |
| MS.gene034151.t1 | AT1G20550 | 27.520 | 367 | 215 | 13 | 78 | 411 | 101 | 449 | 2.51e-25 | 108 |
| MS.gene034151.t1 | AT1G76270 | 28.529 | 340 | 200 | 12 | 83 | 389 | 103 | 432 | 7.28e-25 | 107 |
| MS.gene034151.t1 | AT4G38390 | 26.239 | 343 | 210 | 10 | 81 | 389 | 118 | 451 | 3.60e-23 | 102 |
| MS.gene034151.t1 | AT4G16650 | 28.446 | 341 | 198 | 11 | 84 | 389 | 120 | 449 | 5.27e-22 | 98.6 |
| MS.gene034151.t1 | AT4G16650 | 28.446 | 341 | 198 | 11 | 84 | 389 | 120 | 449 | 5.27e-22 | 98.6 |
| MS.gene034151.t1 | AT3G26370 | 23.430 | 414 | 256 | 12 | 48 | 408 | 112 | 517 | 8.31e-22 | 98.2 |
| MS.gene034151.t1 | AT3G02250 | 25.287 | 348 | 198 | 14 | 83 | 384 | 103 | 434 | 1.70e-20 | 94.0 |
| MS.gene034151.t1 | AT5G65470 | 23.177 | 384 | 223 | 13 | 63 | 378 | 60 | 439 | 3.00e-20 | 93.2 |
| MS.gene034151.t1 | AT1G35510 | 24.791 | 359 | 221 | 9 | 64 | 378 | 136 | 489 | 6.85e-20 | 92.4 |
| MS.gene034151.t1 | AT5G15740 | 24.629 | 337 | 206 | 13 | 87 | 384 | 107 | 434 | 8.22e-20 | 92.0 |
| MS.gene034151.t1 | AT2G03280 | 25.000 | 340 | 208 | 12 | 86 | 387 | 88 | 418 | 1.01e-19 | 91.7 |
| MS.gene034151.t1 | AT1G04910 | 24.074 | 378 | 229 | 14 | 75 | 413 | 81 | 439 | 1.52e-19 | 91.3 |
| MS.gene034151.t1 | AT5G63390 | 23.775 | 408 | 236 | 16 | 63 | 412 | 134 | 524 | 4.26e-19 | 90.1 |
| MS.gene034151.t1 | AT2G01480 | 21.564 | 422 | 274 | 10 | 8 | 378 | 69 | 484 | 5.57e-17 | 83.2 |
| MS.gene034151.t1 | AT2G01480 | 21.564 | 422 | 274 | 10 | 8 | 378 | 69 | 484 | 1.09e-16 | 82.4 |
| MS.gene034151.t1 | AT1G14970 | 22.198 | 464 | 296 | 14 | 8 | 412 | 70 | 527 | 3.38e-16 | 80.9 |
| MS.gene034151.t1 | AT1G14970 | 23.077 | 403 | 251 | 12 | 63 | 412 | 11 | 407 | 4.10e-16 | 80.5 |
| MS.gene034151.t1 | AT2G03280 | 23.433 | 367 | 207 | 13 | 86 | 387 | 88 | 445 | 7.19e-16 | 79.7 |
| MS.gene034151.t1 | AT2G37980 | 23.097 | 381 | 245 | 15 | 45 | 389 | 185 | 553 | 2.73e-14 | 75.1 |
| MS.gene034151.t1 | AT3G26370 | 24.138 | 232 | 157 | 6 | 48 | 263 | 112 | 340 | 5.71e-14 | 73.6 |
| MS.gene034151.t1 | AT5G01100 | 21.467 | 368 | 233 | 12 | 63 | 389 | 191 | 543 | 1.58e-13 | 72.8 |
Find 90 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCCTTTGATCTATAAAT+TGG | 0.210218 | 4.4:+90048101 | None:intergenic |
| TTCTGGTAAAACACAAATAT+TGG | 0.269941 | 4.4:-90047187 | MS.gene034151:CDS |
| CTTAGCAATGTATGGAAGTT+TGG | 0.306231 | 4.4:-90048000 | MS.gene034151:CDS |
| ATTCAGAATCTTTAGAATCT+AGG | 0.306927 | 4.4:+90047310 | None:intergenic |
| TACAAGGATAATAAATTTCC+AGG | 0.315137 | 4.4:-90049427 | MS.gene034151:intron |
| TAATCTTCGGTAACCCGGTT+AGG | 0.354107 | 4.4:+90048143 | None:intergenic |
| GACTTTCTCATGTTTATTGA+AGG | 0.356575 | 4.4:+90048056 | None:intergenic |
| TCGACAAGATCATGTATTTC+CGG | 0.357773 | 4.4:+90047969 | None:intergenic |
| ACACATGTAAGAAAGAATAT+AGG | 0.360475 | 4.4:-90049361 | MS.gene034151:CDS |
| TTACTTGAACAGAATCAAAA+TGG | 0.369726 | 4.4:+90050488 | None:intergenic |
| CTGCTGTGAAGGTCCCTAAC+CGG | 0.377281 | 4.4:-90048157 | MS.gene034151:CDS |
| ATGCGAACGTAGCTGGTAAA+AGG | 0.377684 | 4.4:-90047215 | MS.gene034151:CDS |
| TCAATAAACATGAGAAAGTC+AGG | 0.380362 | 4.4:-90048053 | MS.gene034151:CDS |
| CACATGTAAGAAAGAATATA+GGG | 0.382191 | 4.4:-90049360 | MS.gene034151:CDS |
| TGATAGCCTTGATTCTCTTA+AGG | 0.386325 | 4.4:-90047727 | MS.gene034151:CDS |
| CATCATTATCATCATTTCCT+TGG | 0.387233 | 4.4:+90047850 | None:intergenic |
| GTTGAGATGTTGAACAAGAA+AGG | 0.397949 | 4.4:-90047876 | MS.gene034151:CDS |
| GAGAAAGATTGGTATTGATA+AGG | 0.398684 | 4.4:-90047784 | MS.gene034151:CDS |
| AGATTCTAAAGATTCTGAAT+TGG | 0.399183 | 4.4:-90047307 | MS.gene034151:CDS |
| TAAGAAAGAATATAGGGCTT+TGG | 0.414895 | 4.4:-90049354 | MS.gene034151:CDS |
| ATTGCATGCTTAGCAATGTA+TGG | 0.415033 | 4.4:-90048008 | MS.gene034151:CDS |
| GATCTGAGACAAGTAGTTGC+TGG | 0.426556 | 4.4:-90050562 | MS.gene034151:CDS |
| AATCTCTTGTGCATTGAAAC+AGG | 0.427632 | 4.4:+90047818 | None:intergenic |
| GGTTGGCTTCCTCTAATGTC+AGG | 0.452126 | 4.4:+90048434 | None:intergenic |
| TTGAATGGTTTACCTGAGAT+AGG | 0.452979 | 4.4:+90049110 | None:intergenic |
| CTATTGTATGCGAACGTAGC+TGG | 0.454060 | 4.4:-90047222 | MS.gene034151:CDS |
| CCGTGTTGGGTTAAGCCGTC+TGG | 0.456324 | 4.4:-90049307 | MS.gene034151:CDS |
| GCTGGTAAAAGGATCGGTTC+TGG | 0.458320 | 4.4:-90047204 | MS.gene034151:CDS |
| CTTGTGATCCCTGACATTAG+AGG | 0.462574 | 4.4:-90048443 | MS.gene034151:CDS |
| AGCCGATGAATCTGAAATTA+CGG | 0.462609 | 4.4:+90047158 | None:intergenic |
| TGGACCATTGGTTAATGAAA+AGG | 0.468674 | 4.4:+90049141 | None:intergenic |
| TACAATAGACCCGAAATTGC+TGG | 0.469638 | 4.4:+90047237 | None:intergenic |
| CAATTTATTTGACACAATCA+AGG | 0.470225 | 4.4:-90047755 | MS.gene034151:CDS |
| AACTTTGTCTTCTTATCCGC+CGG | 0.478466 | 4.4:+90047333 | None:intergenic |
| TGACGAGTTAAAACCGTGTT+GGG | 0.478923 | 4.4:-90049320 | MS.gene034151:CDS |
| CGAACCAATTTATAGATCAA+AGG | 0.484845 | 4.4:-90048105 | MS.gene034151:CDS |
| GAACCAATTTATAGATCAAA+GGG | 0.484926 | 4.4:-90048104 | MS.gene034151:CDS |
| GTTGCATCATCTGTTGATCC+TGG | 0.495630 | 4.4:+90049409 | None:intergenic |
| CTATGTAATCTTCGGTAACC+CGG | 0.496129 | 4.4:+90048138 | None:intergenic |
| ACATGATCTTGTCGACTCAA+TGG | 0.503901 | 4.4:-90047961 | MS.gene034151:CDS |
| AGCCGTAATTTCAGATTCAT+CGG | 0.504226 | 4.4:-90047160 | MS.gene034151:CDS |
| GACATTAGAGGAAGCCAACC+TGG | 0.505026 | 4.4:-90048431 | MS.gene034151:CDS |
| AATCTTCGGTAACCCGGTTA+GGG | 0.507255 | 4.4:+90048144 | None:intergenic |
| AGACGGTCAATTTATTGCTG+TGG | 0.514073 | 4.4:-90047907 | MS.gene034151:CDS |
| TGGAAGTTTGGAGTTGCAGC+CGG | 0.514488 | 4.4:-90047988 | MS.gene034151:CDS |
| TTGTCGACTCAATGGTTGAA+AGG | 0.530466 | 4.4:-90047953 | MS.gene034151:CDS |
| AACCTATGAAAATGTAAAGA+TGG | 0.530585 | 4.4:-90049389 | MS.gene034151:CDS |
| GTAATTGTGGCTAGATATCT+CGG | 0.530926 | 4.4:-90048473 | MS.gene034151:CDS |
| TTCATGTCTCAGGAACTTTG+AGG | 0.534152 | 4.4:-90048273 | MS.gene034151:intron |
| AAAGAATATAGGGCTTTGGA+AGG | 0.536631 | 4.4:-90049350 | MS.gene034151:CDS |
| TGCTGTGAAGGTCCCTAACC+GGG | 0.540265 | 4.4:-90048156 | MS.gene034151:CDS |
| GTGTCGAGCTATGTAATCTT+CGG | 0.540315 | 4.4:+90048130 | None:intergenic |
| GATGAATCTGAAATTACGGC+TGG | 0.551992 | 4.4:+90047162 | None:intergenic |
| TCCAGAGTACCACCTATCTC+AGG | 0.558813 | 4.4:-90049122 | MS.gene034151:intron |
| ACCTGAGATAGGTGGTACTC+TGG | 0.562659 | 4.4:+90049121 | None:intergenic |
| CAAGGAAATGATGATAATGA+TGG | 0.567082 | 4.4:-90047849 | MS.gene034151:CDS |
| TAGGTGGTACTCTGGACCAT+TGG | 0.568629 | 4.4:+90049129 | None:intergenic |
| ACAGGTCCTTAAGAGAATCA+AGG | 0.568795 | 4.4:+90047721 | None:intergenic |
| GATAGCAGATGCAGTAATTG+TGG | 0.569998 | 4.4:-90048486 | MS.gene034151:CDS |
| CTGACGAGTTAAAACCGTGT+TGG | 0.574512 | 4.4:-90049321 | MS.gene034151:CDS |
| TTATTTGACACAATCAAGGT+GGG | 0.575583 | 4.4:-90047751 | MS.gene034151:CDS |
| GACGAAGTGGAGCAGACAGA+CGG | 0.578720 | 4.4:-90049172 | MS.gene034151:CDS |
| GTTGGCTTCCTCTAATGTCA+GGG | 0.580467 | 4.4:+90048435 | None:intergenic |
| ACGAAGTGGAGCAGACAGAC+GGG | 0.590735 | 4.4:-90049171 | MS.gene034151:CDS |
| AACGTAGCTGGTAAAAGGAT+CGG | 0.594479 | 4.4:-90047210 | MS.gene034151:CDS |
| CATGAAAAGCATGGAAGGAG+TGG | 0.595034 | 4.4:-90048228 | MS.gene034151:CDS |
| TCGATGGTTGGCAGACGAAG+TGG | 0.598053 | 4.4:-90049185 | MS.gene034151:intron |
| GTGTTCATGAAAAGCATGGA+AGG | 0.599368 | 4.4:-90048233 | MS.gene034151:CDS |
| ATACATTGCTAAGCATGCAA+TGG | 0.603322 | 4.4:+90048010 | None:intergenic |
| AGAACTAACCTCTTGTCACC+AGG | 0.607111 | 4.4:+90048413 | None:intergenic |
| TTGAACAAGAAAGGTTGCCA+AGG | 0.610391 | 4.4:-90047867 | MS.gene034151:CDS |
| CTAACCTCTTGTCACCAGGT+TGG | 0.610952 | 4.4:+90048417 | None:intergenic |
| AATTTAATATTACCTCCAGA+CGG | 0.612585 | 4.4:+90049292 | None:intergenic |
| ATAGATCAAAGGGAAACGTA+AGG | 0.616496 | 4.4:-90048094 | MS.gene034151:CDS |
| TTTATTTGACACAATCAAGG+TGG | 0.619794 | 4.4:-90047752 | MS.gene034151:CDS |
| GTTGCAGGAGTCAATCATGC+CGG | 0.628375 | 4.4:-90047352 | MS.gene034151:intron |
| AAGAATATAGGGCTTTGGAA+GGG | 0.632512 | 4.4:-90049349 | MS.gene034151:CDS |
| TAACAAACATAGTGAGAGTG+AGG | 0.633154 | 4.4:+90050536 | None:intergenic |
| AATAACAAGAATATGCAAAG+TGG | 0.644534 | 4.4:+90047094 | None:intergenic |
| GAAGCCAACCTGGTGACAAG+AGG | 0.647434 | 4.4:-90048421 | MS.gene034151:intron |
| CAATAAACATGAGAAAGTCA+GGG | 0.649727 | 4.4:-90048052 | MS.gene034151:CDS |
| TGTTGGGTTAAGCCGTCTGG+AGG | 0.656915 | 4.4:-90049304 | MS.gene034151:intron |
| CATGGAAGGAGTGGTCAAAG+TGG | 0.657662 | 4.4:-90048219 | MS.gene034151:CDS |
| GTTTCCTAAAACTTACACGA+AGG | 0.660480 | 4.4:-90047700 | MS.gene034151:intron |
| TGACGTGTTCATGAAAAGCA+TGG | 0.665989 | 4.4:-90048237 | MS.gene034151:CDS |
| ACTTTAAGCCGAAAATCAGA+CGG | 0.668948 | 4.4:-90047924 | MS.gene034151:CDS |
| AATGGTTTACCTGAGATAGG+TGG | 0.671281 | 4.4:+90049113 | None:intergenic |
| GCAGGAGTCAATCATGCCGG+CGG | 0.677301 | 4.4:-90047349 | MS.gene034151:intron |
| TGATTGTGTCAAATAAATTG+TGG | 0.680581 | 4.4:+90047758 | None:intergenic |
| CCAGACGGCTTAACCCAACA+CGG | 0.681147 | 4.4:+90049307 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTGACTTTTTATATAT+AGG | - | chr4.4:90047625-90047644 | MS.gene034151:intron | 10.0% |
| !! | AAGATAGATATTAGATAAAT+AGG | - | chr4.4:90048032-90048051 | MS.gene034151:CDS | 15.0% |
| !! | CTTAGATTGATTAATATATT+CGG | + | chr4.4:90048015-90048034 | None:intergenic | 15.0% |
| !! | TTTGGATAAAAATGAAAAAT+GGG | + | chr4.4:90047200-90047219 | None:intergenic | 15.0% |
| !! | TTTGTTCATAACAAAAAAAA+TGG | + | chr4.4:90047312-90047331 | None:intergenic | 15.0% |
| !!! | AAATGAATTTTAACTTTCAA+AGG | - | chr4.4:90047383-90047402 | MS.gene034151:intron | 15.0% |
| !!! | AACAAAGTTAGTTAATTTTA+GGG | - | chr4.4:90047326-90047345 | MS.gene034151:CDS | 15.0% |
| !!! | GTCAATTATTTGTTTTATAT+AGG | + | chr4.4:90047579-90047598 | None:intergenic | 15.0% |
| !! | AAAGTAGAGAAAATAAAGAA+TGG | + | chr4.4:90049100-90049119 | None:intergenic | 20.0% |
| !! | AAAGTGAAAAATTGAAACTT+TGG | + | chr4.4:90047218-90047237 | None:intergenic | 20.0% |
| !! | AAATTGTGTTAAATGTAAAG+TGG | + | chr4.4:90048873-90048892 | None:intergenic | 20.0% |
| !! | CTTTACATTTAACACAATTT+AGG | - | chr4.4:90048873-90048892 | MS.gene034151:intron | 20.0% |
| !! | CTTTGGATAAAAATGAAAAA+TGG | + | chr4.4:90047201-90047220 | None:intergenic | 20.0% |
| !! | TAATAGATTCATATTGAAGT+GGG | + | chr4.4:90048849-90048868 | None:intergenic | 20.0% |
| !! | TTAATAGATTCATATTGAAG+TGG | + | chr4.4:90048850-90048869 | None:intergenic | 20.0% |
| !! | TTCTATATGAATCTCTTAAA+GGG | - | chr4.4:90047249-90047268 | MS.gene034151:CDS | 20.0% |
| !! | TTTCTATATGAATCTCTTAA+AGG | - | chr4.4:90047248-90047267 | MS.gene034151:CDS | 20.0% |
| !!! | AACAACAATCTATTTTTATC+GGG | + | chr4.4:90047945-90047964 | None:intergenic | 20.0% |
| !!! | ACAAAGTTAGTTAATTTTAG+GGG | - | chr4.4:90047327-90047346 | MS.gene034151:CDS | 20.0% |
| !!! | ATTAATTCATATTTTGTCGA+TGG | - | chr4.4:90048459-90048478 | MS.gene034151:CDS | 20.0% |
| !!! | CTTCAAGTTTATATCAATTT+TGG | + | chr4.4:90048765-90048784 | None:intergenic | 20.0% |
| !!! | GAACAAAGTTAGTTAATTTT+AGG | - | chr4.4:90047325-90047344 | MS.gene034151:CDS | 20.0% |
| !!! | GAACAACAATCTATTTTTAT+CGG | + | chr4.4:90047946-90047965 | None:intergenic | 20.0% |
| !!! | TTATTTGTTTTATATAGGAC+TGG | + | chr4.4:90047574-90047593 | None:intergenic | 20.0% |
| ! | AACCTATGAAAATGTAAAGA+TGG | - | chr4.4:90048271-90048290 | MS.gene034151:intron | 25.0% |
| ! | AATAACAAGAATATGCAAAG+TGG | + | chr4.4:90050569-90050588 | None:intergenic | 25.0% |
| ! | AATTTAATATTACCTCCAGA+CGG | + | chr4.4:90048371-90048390 | None:intergenic | 25.0% |
| ! | ACACATGTAAGAAAGAATAT+AGG | - | chr4.4:90048299-90048318 | MS.gene034151:intron | 25.0% |
| ! | ATTAGTGATGTAAGATATTG+CGG | - | chr4.4:90048613-90048632 | MS.gene034151:intron | 25.0% |
| ! | CAATTTATTTGACACAATCA+AGG | - | chr4.4:90049905-90049924 | MS.gene034151:intron | 25.0% |
| ! | CACATGTAAGAAAGAATATA+GGG | - | chr4.4:90048300-90048319 | MS.gene034151:intron | 25.0% |
| ! | GAACCAATTTATAGATCAAA+GGG | - | chr4.4:90049556-90049575 | MS.gene034151:intron | 25.0% |
| ! | GCAAAAAAAGCTTCAAAATA+TGG | + | chr4.4:90048788-90048807 | None:intergenic | 25.0% |
| ! | GTCATTATTGTATATTTAGG+TGG | - | chr4.4:90048703-90048722 | MS.gene034151:intron | 25.0% |
| ! | TACAAGGATAATAAATTTCC+AGG | - | chr4.4:90048233-90048252 | MS.gene034151:CDS | 25.0% |
| ! | TACATTTAACACAATTTAGG+TGG | - | chr4.4:90048876-90048895 | MS.gene034151:intron | 25.0% |
| ! | TCATTGAAATGATGATTTGA+AGG | - | chr4.4:90047515-90047534 | MS.gene034151:intron | 25.0% |
| ! | TGATTGTGTCAAATAAATTG+TGG | + | chr4.4:90049905-90049924 | None:intergenic | 25.0% |
| ! | TTACTTGAACAGAATCAAAA+TGG | + | chr4.4:90047175-90047194 | None:intergenic | 25.0% |
| ! | TTCTGGTAAAACACAAATAT+TGG | - | chr4.4:90050473-90050492 | MS.gene034151:intron | 25.0% |
| ! | TTTCCCTTTGATCTATAAAT+TGG | + | chr4.4:90049562-90049581 | None:intergenic | 25.0% |
| !! | AATGGTCTCTTTTAATCATA+TGG | + | chr4.4:90047157-90047176 | None:intergenic | 25.0% |
| !! | ACAAGAAAATGTTTCTGATT+TGG | - | chr4.4:90047784-90047803 | MS.gene034151:CDS | 25.0% |
| !! | AGATTCTAAAGATTCTGAAT+TGG | - | chr4.4:90050353-90050372 | MS.gene034151:intron | 25.0% |
| !! | AGTCTTTTCATAACTATCAT+TGG | + | chr4.4:90048992-90049011 | None:intergenic | 25.0% |
| !! | ATCAAAATGAGGATTTTTGT+TGG | - | chr4.4:90048589-90048608 | MS.gene034151:intron | 25.0% |
| !! | ATCCATCTTTACATTTTCAT+AGG | + | chr4.4:90048276-90048295 | None:intergenic | 25.0% |
| !! | CAAATTTTACAATACTGCAT+TGG | + | chr4.4:90049068-90049087 | None:intergenic | 25.0% |
| !! | CAAGTTTATATCAATTTTGG+AGG | + | chr4.4:90048762-90048781 | None:intergenic | 25.0% |
| !! | GAGATATTAATTGTTTGTTG+TGG | - | chr4.4:90047481-90047500 | MS.gene034151:intron | 25.0% |
| !! | TAGTAAATTTGCTTACTTTC+TGG | - | chr4.4:90050137-90050156 | MS.gene034151:intron | 25.0% |
| !! | TGACTTTTTATATATAGGAC+CGG | - | chr4.4:90047630-90047649 | MS.gene034151:intron | 25.0% |
| !! | TTTATACACCGAATCTTTTA+TGG | + | chr4.4:90049275-90049294 | None:intergenic | 25.0% |
| !! | TTTTGCTTATATTTCGTTCT+GGG | - | chr4.4:90049330-90049349 | MS.gene034151:CDS | 25.0% |
| !!! | ACAACAATCTATTTTTATCG+GGG | + | chr4.4:90047944-90047963 | None:intergenic | 25.0% |
| !!! | ATTCAGAATCTTTAGAATCT+AGG | + | chr4.4:90050353-90050372 | None:intergenic | 25.0% |
| !!! | GGTGTCATTATTGTATATTT+AGG | - | chr4.4:90048700-90048719 | MS.gene034151:intron | 25.0% |
| !!! | TGAATGAATTGATTTTGTAG+AGG | + | chr4.4:90048907-90048926 | None:intergenic | 25.0% |
| !!! | TTTTTAGTTGTTACATGAGA+AGG | + | chr4.4:90049478-90049497 | None:intergenic | 25.0% |
| AAATACAATCCAAACGCATA+TGG | + | chr4.4:90048420-90048439 | None:intergenic | 30.0% | |
| ACTACTACTAAGTTTGTGTT+TGG | + | chr4.4:90048954-90048973 | None:intergenic | 30.0% | |
| AGAAGAAGGAAATCATCTAA+GGG | + | chr4.4:90048666-90048685 | None:intergenic | 30.0% | |
| ATCTCCTAGTCTAAAAACTA+AGG | + | chr4.4:90047466-90047485 | None:intergenic | 30.0% | |
| CAATAAACATGAGAAAGTCA+GGG | - | chr4.4:90049608-90049627 | MS.gene034151:intron | 30.0% | |
| CACATTCACGATCAATAATT+TGG | - | chr4.4:90049302-90049321 | MS.gene034151:intron | 30.0% | |
| CATCATTATCATCATTTCCT+TGG | + | chr4.4:90049813-90049832 | None:intergenic | 30.0% | |
| CATCTAAGGGAAAATATCTA+TGG | + | chr4.4:90048653-90048672 | None:intergenic | 30.0% | |
| CCTAATATAATTCATGTCTC+AGG | - | chr4.4:90049377-90049396 | MS.gene034151:CDS | 30.0% | |
| CCTGAGACATGAATTATATT+AGG | + | chr4.4:90049380-90049399 | None:intergenic | 30.0% | |
| CGAACCAATTTATAGATCAA+AGG | - | chr4.4:90049555-90049574 | MS.gene034151:intron | 30.0% | |
| GACTTTCTCATGTTTATTGA+AGG | + | chr4.4:90049607-90049626 | None:intergenic | 30.0% | |
| TAAAAAAATTGCTGCTGTGA+AGG | - | chr4.4:90049492-90049511 | MS.gene034151:intron | 30.0% | |
| TAAGAAAGAATATAGGGCTT+TGG | - | chr4.4:90048306-90048325 | MS.gene034151:intron | 30.0% | |
| TCAATAAACATGAGAAAGTC+AGG | - | chr4.4:90049607-90049626 | MS.gene034151:intron | 30.0% | |
| TTATTTGACACAATCAAGGT+GGG | - | chr4.4:90049909-90049928 | MS.gene034151:intron | 30.0% | |
| TTTATTTGACACAATCAAGG+TGG | - | chr4.4:90049908-90049927 | MS.gene034151:intron | 30.0% | |
| TTTCCTCTTAAAAATGTTGC+AGG | - | chr4.4:90050293-90050312 | MS.gene034151:intron | 30.0% | |
| TTTGCTTATATTTCGTTCTG+GGG | - | chr4.4:90049331-90049350 | MS.gene034151:CDS | 30.0% | |
| ! | AATAATGACACCGTTTCTTT+TGG | + | chr4.4:90048692-90048711 | None:intergenic | 30.0% |
| ! | AGTTCTGACCATAAAAGATT+CGG | - | chr4.4:90049264-90049283 | MS.gene034151:intron | 30.0% |
| ! | ATATGCAAAGTGGTTTTTCT+TGG | + | chr4.4:90050559-90050578 | None:intergenic | 30.0% |
| ! | ATTCATATTTTGTCGATGGT+TGG | - | chr4.4:90048463-90048482 | MS.gene034151:CDS | 30.0% |
| ! | CAAGGAAATGATGATAATGA+TGG | - | chr4.4:90049811-90049830 | MS.gene034151:intron | 30.0% |
| ! | GGTTTTTCTTGGAGATATAA+GGG | + | chr4.4:90050548-90050567 | None:intergenic | 30.0% |
| ! | GTGATTGACTTATCAAAATG+AGG | - | chr4.4:90048578-90048597 | MS.gene034151:intron | 30.0% |
| ! | GTTACCTTTTCATTAACCAA+TGG | - | chr4.4:90048515-90048534 | MS.gene034151:intron | 30.0% |
| ! | GTTTTGCTTATATTTCGTTC+TGG | - | chr4.4:90049329-90049348 | MS.gene034151:CDS | 30.0% |
| ! | GTTTTTCTTGGAGATATAAG+GGG | + | chr4.4:90050547-90050566 | None:intergenic | 30.0% |
| ! | TAAATTGACCGTCTGATTTT+CGG | + | chr4.4:90049747-90049766 | None:intergenic | 30.0% |
| ! | TGGGTTGAACAATTAATTTG+AGG | + | chr4.4:90048830-90048849 | None:intergenic | 30.0% |
| ! | TGGTTTTTCTTGGAGATATA+AGG | + | chr4.4:90050549-90050568 | None:intergenic | 30.0% |
| ! | TTAAGTTTTGCAACTTTTCG+AGG | - | chr4.4:90048391-90048410 | MS.gene034151:intron | 30.0% |
| ! | TTTCTCATCGTATTTTCTCT+CGG | - | chr4.4:90048090-90048109 | MS.gene034151:CDS | 30.0% |
| ! | TTTTTATATATAGGACCGGA+GGG | - | chr4.4:90047634-90047653 | MS.gene034151:intron | 30.0% |
| !! | AGATCCTTAGTTTTTAGACT+AGG | - | chr4.4:90047459-90047478 | MS.gene034151:intron | 30.0% |
| !! | GAGAAAGATTGGTATTGATA+AGG | - | chr4.4:90049876-90049895 | MS.gene034151:intron | 30.0% |
| !! | TGTTTTTGTACCAGCAATTT+CGG | - | chr4.4:90050413-90050432 | MS.gene034151:intron | 30.0% |
| !! | TTGTTTTATATAGGACTGGA+GGG | + | chr4.4:90047570-90047589 | None:intergenic | 30.0% |
| !!! | CTCTTTGTTTTTGCTTTACA+AGG | - | chr4.4:90048217-90048236 | MS.gene034151:CDS | 30.0% |
| !!! | GCTCTATGTCTGAATTTTTT+TGG | - | chr4.4:90047761-90047780 | MS.gene034151:CDS | 30.0% |
| !!! | TAAGTTTGTGTTTGGTTTTG+AGG | + | chr4.4:90048946-90048965 | None:intergenic | 30.0% |
| !!! | TTTGTTTTATATAGGACTGG+AGG | + | chr4.4:90047571-90047590 | None:intergenic | 30.0% |
| AACAGGGAAATGGAAAATGA+AGG | + | chr4.4:90049123-90049142 | None:intergenic | 35.0% | |
| AATCTCTTGTGCATTGAAAC+AGG | + | chr4.4:90049845-90049864 | None:intergenic | 35.0% | |
| ACTTTAAGCCGAAAATCAGA+CGG | - | chr4.4:90049736-90049755 | MS.gene034151:intron | 35.0% | |
| AGACTATTCAAATGTGTGTG+CGG | + | chr4.4:90050237-90050256 | None:intergenic | 35.0% | |
| AGCCGTAATTTCAGATTCAT+CGG | - | chr4.4:90050500-90050519 | MS.gene034151:CDS | 35.0% | |
| AGTCAATCACAACGATTGAA+TGG | + | chr4.4:90048568-90048587 | None:intergenic | 35.0% | |
| ATACATTGCTAAGCATGCAA+TGG | + | chr4.4:90049653-90049672 | None:intergenic | 35.0% | |
| ATAGATCAAAGGGAAACGTA+AGG | - | chr4.4:90049566-90049585 | MS.gene034151:intron | 35.0% | |
| ATGAGAAAGTCAGGGAAAAA+AGG | - | chr4.4:90049616-90049635 | MS.gene034151:intron | 35.0% | |
| ATTGCATGCTTAGCAATGTA+TGG | - | chr4.4:90049652-90049671 | MS.gene034151:intron | 35.0% | |
| ATTTGGACAGTGATACTGAT+AGG | - | chr4.4:90047663-90047682 | MS.gene034151:intron | 35.0% | |
| CAACAACTATACTAGAGTCT+AGG | + | chr4.4:90047697-90047716 | None:intergenic | 35.0% | |
| CTTAGCAATGTATGGAAGTT+TGG | - | chr4.4:90049660-90049679 | MS.gene034151:intron | 35.0% | |
| GAGAAGAAGGAAATCATCTA+AGG | + | chr4.4:90048667-90048686 | None:intergenic | 35.0% | |
| GCTCCATGGTTCAATTAAAA+CGG | + | chr4.4:90047990-90048009 | None:intergenic | 35.0% | |
| GTAATTGTGGCTAGATATCT+CGG | - | chr4.4:90049187-90049206 | MS.gene034151:intron | 35.0% | |
| GTTGAGATGTTGAACAAGAA+AGG | - | chr4.4:90049784-90049803 | MS.gene034151:intron | 35.0% | |
| GTTTCCTAAAACTTACACGA+AGG | - | chr4.4:90049960-90049979 | MS.gene034151:intron | 35.0% | |
| TAACAAACATAGTGAGAGTG+AGG | + | chr4.4:90047127-90047146 | None:intergenic | 35.0% | |
| TATCTGGACATGAAGCATAT+TGG | + | chr4.4:90049158-90049177 | None:intergenic | 35.0% | |
| TCGACAAGATCATGTATTTC+CGG | + | chr4.4:90049694-90049713 | None:intergenic | 35.0% | |
| TGGTACAAAAACATCACTCT+CGG | + | chr4.4:90050406-90050425 | None:intergenic | 35.0% | |
| TGTATATTTAGGTGGATGTC+TGG | - | chr4.4:90048711-90048730 | MS.gene034151:intron | 35.0% | |
| TTCTTCTCCACCAAAAGAAA+CGG | - | chr4.4:90048679-90048698 | MS.gene034151:intron | 35.0% | |
| TTGAATGGTTTACCTGAGAT+AGG | + | chr4.4:90048553-90048572 | None:intergenic | 35.0% | |
| TTGCTTATATTTCGTTCTGG+GGG | - | chr4.4:90049332-90049351 | MS.gene034151:CDS | 35.0% | |
| ! | AAACGGTGTTTTTCGTTCAA+AGG | + | chr4.4:90047973-90047992 | None:intergenic | 35.0% |
| ! | AGCCGATGAATCTGAAATTA+CGG | + | chr4.4:90050505-90050524 | None:intergenic | 35.0% |
| ! | CTTTTTATATATAGGACCGG+AGG | - | chr4.4:90047633-90047652 | MS.gene034151:intron | 35.0% |
| ! | GTTTTTGTACCAGCAATTTC+GGG | - | chr4.4:90050414-90050433 | MS.gene034151:intron | 35.0% |
| ! | TGATAGCCTTGATTCTCTTA+AGG | - | chr4.4:90049933-90049952 | MS.gene034151:intron | 35.0% |
| ! | TGGACCATTGGTTAATGAAA+AGG | + | chr4.4:90048522-90048541 | None:intergenic | 35.0% |
| !! | AAAGAATATAGGGCTTTGGA+AGG | - | chr4.4:90048310-90048329 | MS.gene034151:intron | 35.0% |
| !! | AAGAATATAGGGCTTTGGAA+GGG | - | chr4.4:90048311-90048330 | MS.gene034151:intron | 35.0% |
| !! | ACTCCTGCAACATTTTTAAG+AGG | + | chr4.4:90050299-90050318 | None:intergenic | 35.0% |
| !! | GATTTGCTAACTGTGTGAAT+GGG | + | chr4.4:90050075-90050094 | None:intergenic | 35.0% |
| !! | GCAGTGTTTTTGAGAAAGAT+TGG | - | chr4.4:90049865-90049884 | MS.gene034151:intron | 35.0% |
| !! | TACAATACTGCATTGGCTTA+AGG | + | chr4.4:90049061-90049080 | None:intergenic | 35.0% |
| !!! | AATCTATTTTTATCGGGGAG+GGG | + | chr4.4:90047939-90047958 | None:intergenic | 35.0% |
| !!! | ACAATCTATTTTTATCGGGG+AGG | + | chr4.4:90047941-90047960 | None:intergenic | 35.0% |
| !!! | ACACCGTTTTAATTGAACCA+TGG | - | chr4.4:90047984-90048003 | MS.gene034151:CDS | 35.0% |
| !!! | CAATCTATTTTTATCGGGGA+GGG | + | chr4.4:90047940-90047959 | None:intergenic | 35.0% |
| !!! | TCGTGTAAGTTTTAGGAAAC+AGG | + | chr4.4:90049960-90049979 | None:intergenic | 35.0% |
| AACGTAGCTGGTAAAAGGAT+CGG | - | chr4.4:90050450-90050469 | MS.gene034151:intron | 40.0% | |
| AACTTTGTCTTCTTATCCGC+CGG | + | chr4.4:90050330-90050349 | None:intergenic | 40.0% | |
| AATGGTTTACCTGAGATAGG+TGG | + | chr4.4:90048550-90048569 | None:intergenic | 40.0% | |
| ACAGGTCCTTAAGAGAATCA+AGG | + | chr4.4:90049942-90049961 | None:intergenic | 40.0% | |
| ACGAAAGAAGAACAGGGAAA+TGG | + | chr4.4:90049133-90049152 | None:intergenic | 40.0% | |
| AGACGGTCAATTTATTGCTG+TGG | - | chr4.4:90049753-90049772 | MS.gene034151:intron | 40.0% | |
| CAATTACTGCATCTGCTATC+TGG | + | chr4.4:90049174-90049193 | None:intergenic | 40.0% | |
| CTATGTAATCTTCGGTAACC+CGG | + | chr4.4:90049525-90049544 | None:intergenic | 40.0% | |
| GACTATTCAAATGTGTGTGC+GGG | + | chr4.4:90050236-90050255 | None:intergenic | 40.0% | |
| GATAGCAGATGCAGTAATTG+TGG | - | chr4.4:90049174-90049193 | MS.gene034151:CDS | 40.0% | |
| GTCGTAGGATTGAGATAAGA+CGG | - | chr4.4:90050099-90050118 | MS.gene034151:intron | 40.0% | |
| GTGTCGAGCTATGTAATCTT+CGG | + | chr4.4:90049533-90049552 | None:intergenic | 40.0% | |
| TAATATATTCGGCAGCTCCA+TGG | + | chr4.4:90048004-90048023 | None:intergenic | 40.0% | |
| TACAATAGACCCGAAATTGC+TGG | + | chr4.4:90050426-90050445 | None:intergenic | 40.0% | |
| TCACACAGTTAGCAAATCGA+TGG | - | chr4.4:90050077-90050096 | MS.gene034151:intron | 40.0% | |
| TGACGAGTTAAAACCGTGTT+GGG | - | chr4.4:90048340-90048359 | MS.gene034151:intron | 40.0% | |
| TGACGTGTTCATGAAAAGCA+TGG | - | chr4.4:90049423-90049442 | MS.gene034151:CDS | 40.0% | |
| TGTCCAAATTATACTCCCTC+CGG | + | chr4.4:90047652-90047671 | None:intergenic | 40.0% | |
| TTCATGTCTCAGGAACTTTG+AGG | - | chr4.4:90049387-90049406 | MS.gene034151:CDS | 40.0% | |
| TTGAACAAGAAAGGTTGCCA+AGG | - | chr4.4:90049793-90049812 | MS.gene034151:intron | 40.0% | |
| ! | AATGACACCGTTTCTTTTGG+TGG | + | chr4.4:90048689-90048708 | None:intergenic | 40.0% |
| ! | ATGCAAGTGCTTTTCTGATC+TGG | - | chr4.4:90048129-90048148 | MS.gene034151:CDS | 40.0% |
| ! | CTCACCTTCGTGTAAGTTTT+AGG | + | chr4.4:90049967-90049986 | None:intergenic | 40.0% |
| ! | GATGAATCTGAAATTACGGC+TGG | + | chr4.4:90050501-90050520 | None:intergenic | 40.0% |
| ! | GTGTTCATGAAAAGCATGGA+AGG | - | chr4.4:90049427-90049446 | MS.gene034151:intron | 40.0% |
| ! | GTTTCTTTTGGTGGAGAAGA+AGG | + | chr4.4:90048680-90048699 | None:intergenic | 40.0% |
| ! | TGCTTATATTTCGTTCTGGG+GGG | - | chr4.4:90049333-90049352 | MS.gene034151:CDS | 40.0% |
| !! | ACATGATCTTGTCGACTCAA+TGG | - | chr4.4:90049699-90049718 | MS.gene034151:intron | 40.0% |
| !! | AGGGGAAATTTGTTAGTAGC+AGG | + | chr4.4:90047921-90047940 | None:intergenic | 40.0% |
| !! | ATTGGTGACGAAAGAAGAAC+AGG | + | chr4.4:90049140-90049159 | None:intergenic | 40.0% |
| !! | CGATTTGCTAACTGTGTGAA+TGG | + | chr4.4:90050076-90050095 | None:intergenic | 40.0% |
| !! | GGGGAAATTTGTTAGTAGCA+GGG | + | chr4.4:90047920-90047939 | None:intergenic | 40.0% |
| !! | TTGGTGACGAAAGAAGAACA+GGG | + | chr4.4:90049139-90049158 | None:intergenic | 40.0% |
| !! | TTGTCGACTCAATGGTTGAA+AGG | - | chr4.4:90049707-90049726 | MS.gene034151:intron | 40.0% |
| AATCTTCGGTAACCCGGTTA+GGG | + | chr4.4:90049519-90049538 | None:intergenic | 45.0% | |
| ACACATGAGCACACACACAT+GGG | - | chr4.4:90050022-90050041 | MS.gene034151:intron | 45.0% | |
| AGAACTAACCTCTTGTCACC+AGG | + | chr4.4:90049250-90049269 | None:intergenic | 45.0% | |
| ATACCACTGAGCTACACCTT+CGG | + | chr4.4:90047864-90047883 | None:intergenic | 45.0% | |
| ATGCGAACGTAGCTGGTAAA+AGG | - | chr4.4:90050445-90050464 | MS.gene034151:intron | 45.0% | |
| CTATTGTATGCGAACGTAGC+TGG | - | chr4.4:90050438-90050457 | MS.gene034151:intron | 45.0% | |
| CTGACGAGTTAAAACCGTGT+TGG | - | chr4.4:90048339-90048358 | MS.gene034151:intron | 45.0% | |
| CTGGGGGGGAATATAATTCA+TGG | - | chr4.4:90049348-90049367 | MS.gene034151:CDS | 45.0% | |
| CTTGTGATCCCTGACATTAG+AGG | - | chr4.4:90049217-90049236 | MS.gene034151:intron | 45.0% | |
| GATCGTTGGATGAGATCAGA+CGG | + | chr4.4:90050164-90050183 | None:intergenic | 45.0% | |
| GTAGCTCAGTGGTATCAGTT+TGG | - | chr4.4:90047869-90047888 | MS.gene034151:CDS | 45.0% | |
| GTCAGCAGATTAGTGATCGT+TGG | + | chr4.4:90050178-90050197 | None:intergenic | 45.0% | |
| GTTAGCAAATCGATGGTCGT+AGG | - | chr4.4:90050084-90050103 | MS.gene034151:intron | 45.0% | |
| GTTGCATCATCTGTTGATCC+TGG | + | chr4.4:90048254-90048273 | None:intergenic | 45.0% | |
| TAATCTTCGGTAACCCGGTT+AGG | + | chr4.4:90049520-90049539 | None:intergenic | 45.0% | |
| TGCTAACTGTGTGAATGGGT+GGG | + | chr4.4:90050071-90050090 | None:intergenic | 45.0% | |
| TGGTGTGAGTTTGTGATTGC+AGG | - | chr4.4:90050200-90050219 | MS.gene034151:intron | 45.0% | |
| TTGCTAACTGTGTGAATGGG+TGG | + | chr4.4:90050072-90050091 | None:intergenic | 45.0% | |
| ! | CATGAAAAGCATGGAAGGAG+TGG | - | chr4.4:90049432-90049451 | MS.gene034151:intron | 45.0% |
| ! | GATCACTAATCTGCTGACTG+TGG | - | chr4.4:90050180-90050199 | MS.gene034151:intron | 45.0% |
| ! | GATCTGAGACAAGTAGTTGC+TGG | - | chr4.4:90047098-90047117 | MS.gene034151:CDS | 45.0% |
| ! | GTTGGCTTCCTCTAATGTCA+GGG | + | chr4.4:90049228-90049247 | None:intergenic | 45.0% |
| !! | GCTTATATTTCGTTCTGGGG+GGG | - | chr4.4:90049334-90049353 | MS.gene034151:CDS | 45.0% |
| ACCTGAGATAGGTGGTACTC+TGG | + | chr4.4:90048542-90048561 | None:intergenic | 50.0% | |
| ATGGGTGGGATTGTAACTGC+AGG | + | chr4.4:90050057-90050076 | None:intergenic | 50.0% | |
| CACACATGAGCACACACACA+TGG | - | chr4.4:90050021-90050040 | MS.gene034151:intron | 50.0% | |
| CATGGAAGGAGTGGTCAAAG+TGG | - | chr4.4:90049441-90049460 | MS.gene034151:intron | 50.0% | |
| CTAACCTCTTGTCACCAGGT+TGG | + | chr4.4:90049246-90049265 | None:intergenic | 50.0% | |
| GACATTAGAGGAAGCCAACC+TGG | - | chr4.4:90049229-90049248 | MS.gene034151:intron | 50.0% | |
| GATCGAACCCTGGACTCAAT+CGG | + | chr4.4:90047898-90047917 | None:intergenic | 50.0% | |
| GTTGCAGGAGTCAATCATGC+CGG | - | chr4.4:90050308-90050327 | MS.gene034151:intron | 50.0% | |
| TACCACTGAGCTACACCTTC+GGG | + | chr4.4:90047863-90047882 | None:intergenic | 50.0% | |
| TAGGTGGTACTCTGGACCAT+TGG | + | chr4.4:90048534-90048553 | None:intergenic | 50.0% | |
| TCGAGGAAGCCATATGCGTT+TGG | - | chr4.4:90048408-90048427 | MS.gene034151:intron | 50.0% | |
| TGAGCACACACACATGGGTT+TGG | - | chr4.4:90050027-90050046 | MS.gene034151:intron | 50.0% | |
| ! | GCTGGTAAAAGGATCGGTTC+TGG | - | chr4.4:90050456-90050475 | MS.gene034151:intron | 50.0% |
| ! | GGACCGGAGGGAGTATAATT+TGG | - | chr4.4:90047646-90047665 | MS.gene034151:intron | 50.0% |
| ! | TCCAGAGTACCACCTATCTC+AGG | - | chr4.4:90048538-90048557 | MS.gene034151:intron | 50.0% |
| ! | TGGAAGTTTGGAGTTGCAGC+CGG | - | chr4.4:90049672-90049691 | MS.gene034151:intron | 50.0% |
| ! | TTGGACACCGATTGAGTCCA+GGG | - | chr4.4:90047888-90047907 | MS.gene034151:CDS | 50.0% |
| ! | TTTGGACACCGATTGAGTCC+AGG | - | chr4.4:90047887-90047906 | MS.gene034151:CDS | 50.0% |
| !! | GGTTGGCTTCCTCTAATGTC+AGG | + | chr4.4:90049229-90049248 | None:intergenic | 50.0% |
| ACCACTGAGCTACACCTTCG+GGG | + | chr4.4:90047862-90047881 | None:intergenic | 55.0% | |
| ACGAAGTGGAGCAGACAGAC+GGG | - | chr4.4:90048489-90048508 | MS.gene034151:intron | 55.0% | |
| CCAGACGGCTTAACCCAACA+CGG | + | chr4.4:90048356-90048375 | None:intergenic | 55.0% | |
| CTGCTGTGAAGGTCCCTAAC+CGG | - | chr4.4:90049503-90049522 | MS.gene034151:intron | 55.0% | |
| GAAGCCAACCTGGTGACAAG+AGG | - | chr4.4:90049239-90049258 | MS.gene034151:intron | 55.0% | |
| GACGAAGTGGAGCAGACAGA+CGG | - | chr4.4:90048488-90048507 | MS.gene034151:CDS | 55.0% | |
| GTTTGTCCTTGTGTCCCCGA+AGG | - | chr4.4:90047845-90047864 | MS.gene034151:CDS | 55.0% | |
| TAGTAGCAGGGATCGAACCC+TGG | + | chr4.4:90047908-90047927 | None:intergenic | 55.0% | |
| TCGATGGTTGGCAGACGAAG+TGG | - | chr4.4:90048475-90048494 | MS.gene034151:CDS | 55.0% | |
| TGCTGTGAAGGTCCCTAACC+GGG | - | chr4.4:90049504-90049523 | MS.gene034151:intron | 55.0% | |
| TGTTGGGTTAAGCCGTCTGG+AGG | - | chr4.4:90048356-90048375 | MS.gene034151:intron | 55.0% | |
| CCGTGTTGGGTTAAGCCGTC+TGG | - | chr4.4:90048353-90048372 | MS.gene034151:intron | 60.0% | |
| GCAGGAGTCAATCATGCCGG+CGG | - | chr4.4:90050311-90050330 | MS.gene034151:intron | 60.0% | |
| GCTACACCTTCGGGGACACA+AGG | + | chr4.4:90047854-90047873 | None:intergenic | 60.0% | |
| ! | TCCCCGAAGGTGTAGCTCAG+TGG | - | chr4.4:90047858-90047877 | MS.gene034151:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 90047089 | 90050593 | 90047089 | ID=MS.gene034151 |
| chr4.4 | mRNA | 90047089 | 90050593 | 90047089 | ID=MS.gene034151.t1;Parent=MS.gene034151 |
| chr4.4 | exon | 90050492 | 90050593 | 90050492 | ID=MS.gene034151.t1.exon1;Parent=MS.gene034151.t1 |
| chr4.4 | CDS | 90050492 | 90050593 | 90050492 | ID=cds.MS.gene034151.t1;Parent=MS.gene034151.t1 |
| chr4.4 | exon | 90049305 | 90049443 | 90049305 | ID=MS.gene034151.t1.exon2;Parent=MS.gene034151.t1 |
| chr4.4 | CDS | 90049305 | 90049443 | 90049305 | ID=cds.MS.gene034151.t1;Parent=MS.gene034151.t1 |
| chr4.4 | exon | 90049123 | 90049193 | 90049123 | ID=MS.gene034151.t1.exon3;Parent=MS.gene034151.t1 |
| chr4.4 | CDS | 90049123 | 90049193 | 90049123 | ID=cds.MS.gene034151.t1;Parent=MS.gene034151.t1 |
| chr4.4 | exon | 90048422 | 90048507 | 90048422 | ID=MS.gene034151.t1.exon4;Parent=MS.gene034151.t1 |
| chr4.4 | CDS | 90048422 | 90048507 | 90048422 | ID=cds.MS.gene034151.t1;Parent=MS.gene034151.t1 |
| chr4.4 | exon | 90047701 | 90048283 | 90047701 | ID=MS.gene034151.t1.exon5;Parent=MS.gene034151.t1 |
| chr4.4 | CDS | 90047701 | 90048283 | 90047701 | ID=cds.MS.gene034151.t1;Parent=MS.gene034151.t1 |
| chr4.4 | exon | 90047089 | 90047367 | 90047089 | ID=MS.gene034151.t1.exon6;Parent=MS.gene034151.t1 |
| chr4.4 | CDS | 90047089 | 90047367 | 90047089 | ID=cds.MS.gene034151.t1;Parent=MS.gene034151.t1 |
| Gene Sequence |
| Protein sequence |
