Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34286.t1 | XP_013454584.1 | 99 | 385 | 4 | 0 | 1 | 385 | 35 | 419 | 1.40E-216 | 761.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34286.t1 | Q9LU40 | 62.4 | 388 | 140 | 2 | 3 | 385 | 36 | 422 | 5.9e-139 | 495.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34286.t1 | A0A072URW6 | 99.0 | 385 | 4 | 0 | 1 | 385 | 35 | 419 | 1.0e-216 | 761.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene34286 | 0.84337 | 1.46E-58 | -1.69E-46 |
| MS.gene049190 | MS.gene34286 | 0.875369 | 3.25E-68 | -1.69E-46 |
| MS.gene049221 | MS.gene34286 | 0.80067 | 1.29E-48 | -1.69E-46 |
| MS.gene049227 | MS.gene34286 | 0.840292 | 9.49E-58 | -1.69E-46 |
| MS.gene049328 | MS.gene34286 | 0.821225 | 4.52E-53 | -1.69E-46 |
| MS.gene049350 | MS.gene34286 | 0.823145 | 1.62E-53 | -1.69E-46 |
| MS.gene049418 | MS.gene34286 | 0.866346 | 3.05E-65 | -1.69E-46 |
| MS.gene049698 | MS.gene34286 | 0.80734 | 5.30E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene34286 | 0.862379 | 5.29E-64 | -1.69E-46 |
| MS.gene049807 | MS.gene34286 | 0.865103 | 7.52E-65 | -1.69E-46 |
| MS.gene049824 | MS.gene34286 | 0.800411 | 1.46E-48 | -1.69E-46 |
| MS.gene049850 | MS.gene34286 | 0.825845 | 3.75E-54 | -1.69E-46 |
| MS.gene049887 | MS.gene34286 | 0.874349 | 7.24E-68 | -1.69E-46 |
| MS.gene050224 | MS.gene34286 | 0.809228 | 2.10E-50 | -1.69E-46 |
| MS.gene050241 | MS.gene34286 | 0.81193 | 5.47E-51 | -1.69E-46 |
| MS.gene050310 | MS.gene34286 | 0.815288 | 9.98E-52 | -1.69E-46 |
| MS.gene05045 | MS.gene34286 | 0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene050630 | MS.gene34286 | 0.832158 | 1.11E-55 | -1.69E-46 |
| MS.gene050657 | MS.gene34286 | 0.831351 | 1.75E-55 | -1.69E-46 |
| MS.gene050807 | MS.gene34286 | 0.82344 | 1.38E-53 | -1.69E-46 |
| MS.gene050901 | MS.gene34286 | 0.824651 | 7.19E-54 | -1.69E-46 |
| MS.gene050959 | MS.gene34286 | 0.804355 | 2.25E-49 | -1.69E-46 |
| MS.gene051007 | MS.gene34286 | 0.813022 | 3.16E-51 | -1.69E-46 |
| MS.gene051018 | MS.gene34286 | 0.843156 | 1.67E-58 | -1.69E-46 |
| MS.gene051021 | MS.gene34286 | 0.860623 | 1.81E-63 | -1.69E-46 |
| MS.gene051067 | MS.gene34286 | 0.842887 | 1.97E-58 | -1.69E-46 |
| MS.gene051102 | MS.gene34286 | 0.828174 | 1.04E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene34286 | 0.827678 | 1.37E-54 | -1.69E-46 |
| MS.gene051248 | MS.gene34286 | 0.822985 | 1.77E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene34286 | 0.848292 | 6.73E-60 | -1.69E-46 |
| MS.gene051388 | MS.gene34286 | 0.835072 | 2.08E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene34286 | 0.808133 | 3.60E-50 | -1.69E-46 |
| MS.gene05150 | MS.gene34286 | 0.810461 | 1.14E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene34286 | 0.858406 | 8.42E-63 | -1.69E-46 |
| MS.gene051700 | MS.gene34286 | 0.800087 | 1.70E-48 | -1.69E-46 |
| MS.gene051719 | MS.gene34286 | 0.865016 | 8.01E-65 | -1.69E-46 |
| MS.gene051720 | MS.gene34286 | 0.876929 | 9.45E-69 | -1.69E-46 |
| MS.gene051744 | MS.gene34286 | 0.854181 | 1.46E-61 | -1.69E-46 |
| MS.gene051885 | MS.gene34286 | 0.820995 | 5.11E-53 | -1.69E-46 |
| MS.gene052000 | MS.gene34286 | 0.808496 | 3.01E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene34286 | 0.807613 | 4.64E-50 | -1.69E-46 |
| MS.gene052133 | MS.gene34286 | 0.830179 | 3.40E-55 | -1.69E-46 |
| MS.gene052155 | MS.gene34286 | -0.825963 | 3.52E-54 | -1.69E-46 |
| MS.gene052234 | MS.gene34286 | 0.814241 | 1.70E-51 | -1.69E-46 |
| MS.gene052239 | MS.gene34286 | -0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene34286 | 0.823064 | 1.69E-53 | -1.69E-46 |
| MS.gene052311 | MS.gene34286 | 0.806604 | 7.59E-50 | -1.69E-46 |
| MS.gene052335 | MS.gene34286 | 0.806452 | 8.17E-50 | -1.69E-46 |
| MS.gene052459 | MS.gene34286 | 0.804687 | 1.92E-49 | -1.69E-46 |
| MS.gene052514 | MS.gene34286 | 0.825555 | 4.40E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene34286 | 0.868183 | 7.89E-66 | -1.69E-46 |
| MS.gene052609 | MS.gene34286 | 0.841223 | 5.41E-58 | -1.69E-46 |
| MS.gene052611 | MS.gene34286 | 0.823301 | 1.49E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene34286 | 0.851717 | 7.40E-61 | -1.69E-46 |
| MS.gene052731 | MS.gene34286 | 0.826693 | 2.36E-54 | -1.69E-46 |
| MS.gene052732 | MS.gene34286 | 0.909227 | 7.19E-82 | -1.69E-46 |
| MS.gene053079 | MS.gene34286 | 0.822335 | 2.50E-53 | -1.69E-46 |
| MS.gene053122 | MS.gene34286 | 0.819516 | 1.11E-52 | -1.69E-46 |
| MS.gene053143 | MS.gene34286 | 0.852452 | 4.57E-61 | -1.69E-46 |
| MS.gene053144 | MS.gene34286 | 0.993344 | 4.35E-199 | -1.69E-46 |
| MS.gene053164 | MS.gene34286 | 0.819593 | 1.07E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene34286 | 0.85742 | 1.65E-62 | -1.69E-46 |
| MS.gene053174 | MS.gene34286 | 0.874491 | 6.48E-68 | -1.69E-46 |
| MS.gene053226 | MS.gene34286 | 0.827764 | 1.31E-54 | -1.69E-46 |
| MS.gene053536 | MS.gene34286 | 0.847826 | 9.04E-60 | -1.69E-46 |
| MS.gene053538 | MS.gene34286 | 0.84947 | 3.17E-60 | -1.69E-46 |
| MS.gene053581 | MS.gene34286 | 0.879528 | 1.16E-69 | -1.69E-46 |
| MS.gene053599 | MS.gene34286 | 0.817033 | 4.07E-52 | -1.69E-46 |
| MS.gene054550 | MS.gene34286 | 0.87671 | 1.12E-68 | -1.69E-46 |
| MS.gene054554 | MS.gene34286 | 0.826393 | 2.78E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene34286 | 0.989341 | 1.04E-177 | -1.69E-46 |
| MS.gene054651 | MS.gene34286 | 0.804526 | 2.07E-49 | -1.69E-46 |
| MS.gene054824 | MS.gene34286 | 0.846869 | 1.66E-59 | -1.69E-46 |
| MS.gene055083 | MS.gene34286 | 0.843358 | 1.47E-58 | -1.69E-46 |
| MS.gene055144 | MS.gene34286 | 0.838015 | 3.70E-57 | -1.69E-46 |
| MS.gene055465 | MS.gene34286 | 0.888053 | 8.30E-73 | -1.69E-46 |
| MS.gene055466 | MS.gene34286 | 0.874372 | 7.11E-68 | -1.69E-46 |
| MS.gene055467 | MS.gene34286 | 0.835036 | 2.12E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene34286 | 0.872608 | 2.79E-67 | -1.69E-46 |
| MS.gene055469 | MS.gene34286 | 0.871086 | 8.93E-67 | -1.69E-46 |
| MS.gene055512 | MS.gene34286 | 0.822312 | 2.53E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene34286 | 0.809003 | 2.34E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene34286 | 0.901133 | 3.65E-78 | -1.69E-46 |
| MS.gene055580 | MS.gene34286 | -0.8986 | 4.53E-77 | -1.69E-46 |
| MS.gene05574 | MS.gene34286 | 0.802103 | 6.58E-49 | -1.69E-46 |
| MS.gene055764 | MS.gene34286 | 0.833597 | 4.87E-56 | -1.69E-46 |
| MS.gene055890 | MS.gene34286 | 0.862826 | 3.85E-64 | -1.69E-46 |
| MS.gene055891 | MS.gene34286 | 0.869219 | 3.65E-66 | -1.69E-46 |
| MS.gene056005 | MS.gene34286 | 0.818425 | 1.97E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene34286 | -0.879353 | 1.34E-69 | -1.69E-46 |
| MS.gene056050 | MS.gene34286 | 0.814141 | 1.79E-51 | -1.69E-46 |
| MS.gene056169 | MS.gene34286 | 0.812565 | 3.98E-51 | -1.69E-46 |
| MS.gene056228 | MS.gene34286 | 0.851451 | 8.80E-61 | -1.69E-46 |
| MS.gene056308 | MS.gene34286 | 0.856472 | 3.14E-62 | -1.69E-46 |
| MS.gene056368 | MS.gene34286 | 0.829838 | 4.11E-55 | -1.69E-46 |
| MS.gene056396 | MS.gene34286 | 0.840963 | 6.33E-58 | -1.69E-46 |
| MS.gene056398 | MS.gene34286 | 0.805104 | 1.57E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene34286 | 0.864586 | 1.09E-64 | -1.69E-46 |
| MS.gene056542 | MS.gene34286 | 0.800116 | 1.68E-48 | -1.69E-46 |
| MS.gene056543 | MS.gene34286 | 0.80029 | 1.54E-48 | -1.69E-46 |
| MS.gene056545 | MS.gene34286 | 0.805016 | 1.64E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene34286 | 0.857857 | 1.23E-62 | -1.69E-46 |
| MS.gene056584 | MS.gene34286 | 0.806859 | 6.70E-50 | -1.69E-46 |
| MS.gene057082 | MS.gene34286 | 0.811876 | 5.62E-51 | -1.69E-46 |
| MS.gene057294 | MS.gene34286 | 0.81785 | 2.66E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene34286 | 0.806194 | 9.26E-50 | -1.69E-46 |
| MS.gene057446 | MS.gene34286 | 0.821061 | 4.93E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene34286 | 0.807802 | 4.23E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene34286 | 0.819594 | 1.07E-52 | -1.69E-46 |
| MS.gene058087 | MS.gene34286 | 0.832587 | 8.68E-56 | -1.69E-46 |
| MS.gene058330 | MS.gene34286 | 0.809248 | 2.08E-50 | -1.69E-46 |
| MS.gene058339 | MS.gene34286 | 0.820569 | 6.40E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene34286 | 0.810771 | 9.77E-51 | -1.69E-46 |
| MS.gene058649 | MS.gene34286 | 0.849528 | 3.05E-60 | -1.69E-46 |
| MS.gene058668 | MS.gene34286 | 0.844962 | 5.46E-59 | -1.69E-46 |
| MS.gene058852 | MS.gene34286 | 0.833348 | 5.62E-56 | -1.69E-46 |
| MS.gene058945 | MS.gene34286 | 0.839955 | 1.16E-57 | -1.69E-46 |
| MS.gene05894 | MS.gene34286 | 0.85264 | 4.04E-61 | -1.69E-46 |
| MS.gene059015 | MS.gene34286 | 0.841651 | 4.18E-58 | -1.69E-46 |
| MS.gene059154 | MS.gene34286 | 0.865795 | 4.56E-65 | -1.69E-46 |
| MS.gene059297 | MS.gene34286 | 0.833995 | 3.87E-56 | -1.69E-46 |
| MS.gene059424 | MS.gene34286 | 0.841779 | 3.86E-58 | -1.69E-46 |
| MS.gene059426 | MS.gene34286 | 0.813267 | 2.79E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene34286 | 0.824846 | 6.47E-54 | -1.69E-46 |
| MS.gene059625 | MS.gene34286 | 0.815259 | 1.01E-51 | -1.69E-46 |
| MS.gene059863 | MS.gene34286 | 0.83468 | 2.61E-56 | -1.69E-46 |
| MS.gene059937 | MS.gene34286 | 0.813644 | 2.31E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene34286 | 0.839081 | 1.96E-57 | -1.69E-46 |
| MS.gene060519 | MS.gene34286 | 0.849967 | 2.30E-60 | -1.69E-46 |
| MS.gene060587 | MS.gene34286 | 0.868935 | 4.51E-66 | -1.69E-46 |
| MS.gene060603 | MS.gene34286 | 0.851807 | 6.98E-61 | -1.69E-46 |
| MS.gene060884 | MS.gene34286 | 0.877546 | 5.76E-69 | -1.69E-46 |
| MS.gene060886 | MS.gene34286 | 0.876175 | 1.72E-68 | -1.69E-46 |
| MS.gene060888 | MS.gene34286 | 0.836626 | 8.38E-57 | -1.69E-46 |
| MS.gene061006 | MS.gene34286 | 0.828536 | 8.51E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene34286 | 0.822943 | 1.81E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34286 | MS.gene066643 | PPI |
| MS.gene34286 | MS.gene28256 | PPI |
| MS.gene064122 | MS.gene34286 | PPI |
| MS.gene83787 | MS.gene34286 | PPI |
| MS.gene34286 | MS.gene50341 | PPI |
| MS.gene79356 | MS.gene34286 | PPI |
| MS.gene87552 | MS.gene34286 | PPI |
| MS.gene34286 | MS.gene93583 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34286.t1 | MTR_4g008200 | 98.961 | 385 | 4 | 0 | 1 | 385 | 35 | 419 | 0.0 | 786 |
| MS.gene34286.t1 | MTR_4g008200 | 99.185 | 368 | 3 | 0 | 18 | 385 | 1 | 368 | 0.0 | 753 |
| MS.gene34286.t1 | MTR_2g038320 | 52.247 | 356 | 167 | 3 | 31 | 385 | 70 | 423 | 4.27e-137 | 398 |
| MS.gene34286.t1 | MTR_3g115220 | 27.714 | 350 | 201 | 11 | 44 | 355 | 103 | 438 | 6.10e-27 | 112 |
| MS.gene34286.t1 | MTR_5g059260 | 27.011 | 348 | 204 | 9 | 53 | 355 | 158 | 500 | 2.35e-26 | 111 |
| MS.gene34286.t1 | MTR_4g100810 | 27.729 | 339 | 199 | 12 | 52 | 355 | 108 | 435 | 1.01e-24 | 105 |
| MS.gene34286.t1 | MTR_4g082310 | 26.023 | 342 | 203 | 12 | 52 | 354 | 97 | 427 | 1.04e-24 | 105 |
| MS.gene34286.t1 | MTR_5g042200 | 27.190 | 331 | 192 | 14 | 52 | 344 | 85 | 404 | 1.15e-24 | 105 |
| MS.gene34286.t1 | MTR_3g096020 | 27.548 | 363 | 195 | 15 | 29 | 344 | 164 | 505 | 2.38e-24 | 105 |
| MS.gene34286.t1 | MTR_3g100310 | 25.469 | 373 | 207 | 13 | 38 | 344 | 85 | 452 | 2.61e-24 | 104 |
| MS.gene34286.t1 | MTR_5g012770 | 27.941 | 340 | 190 | 13 | 50 | 355 | 122 | 440 | 3.62e-24 | 104 |
| MS.gene34286.t1 | MTR_4g110030 | 25.770 | 357 | 213 | 14 | 37 | 353 | 103 | 447 | 5.68e-24 | 103 |
| MS.gene34286.t1 | MTR_1g031590 | 23.575 | 386 | 237 | 11 | 29 | 362 | 125 | 504 | 1.34e-23 | 102 |
| MS.gene34286.t1 | MTR_5g064620 | 26.633 | 398 | 219 | 17 | 2 | 350 | 65 | 438 | 2.47e-23 | 102 |
| MS.gene34286.t1 | MTR_2g059350 | 24.709 | 344 | 211 | 12 | 49 | 353 | 112 | 446 | 4.58e-22 | 98.2 |
| MS.gene34286.t1 | MTR_3g086570 | 23.002 | 413 | 257 | 13 | 14 | 373 | 104 | 508 | 6.59e-22 | 97.8 |
| MS.gene34286.t1 | MTR_3g026650 | 25.272 | 368 | 206 | 15 | 38 | 355 | 153 | 501 | 2.14e-21 | 96.3 |
| MS.gene34286.t1 | MTR_5g032100 | 24.444 | 360 | 202 | 12 | 50 | 344 | 84 | 438 | 2.43e-21 | 95.9 |
| MS.gene34286.t1 | MTR_4g010990 | 25.434 | 346 | 222 | 9 | 36 | 353 | 56 | 393 | 4.20e-20 | 92.0 |
| MS.gene34286.t1 | MTR_4g084570 | 23.580 | 352 | 220 | 8 | 36 | 344 | 135 | 480 | 4.94e-20 | 92.0 |
| MS.gene34286.t1 | MTR_3g005340 | 24.576 | 354 | 216 | 10 | 36 | 344 | 130 | 477 | 6.06e-20 | 92.0 |
| MS.gene34286.t1 | MTR_4g023030 | 24.259 | 371 | 225 | 12 | 29 | 355 | 203 | 561 | 1.08e-19 | 91.3 |
| MS.gene34286.t1 | MTR_3g099480 | 24.185 | 368 | 215 | 14 | 29 | 350 | 115 | 464 | 2.21e-19 | 90.1 |
| MS.gene34286.t1 | MTR_4g019210 | 24.862 | 362 | 216 | 12 | 41 | 355 | 207 | 559 | 8.18e-19 | 88.6 |
| MS.gene34286.t1 | MTR_4g010990 | 26.299 | 308 | 194 | 7 | 71 | 353 | 5 | 304 | 2.16e-18 | 85.9 |
| MS.gene34286.t1 | MTR_7g017330 | 25.271 | 277 | 144 | 8 | 47 | 272 | 93 | 357 | 5.22e-16 | 80.1 |
| MS.gene34286.t1 | MTR_3g086570 | 22.256 | 328 | 199 | 11 | 14 | 288 | 104 | 428 | 9.74e-16 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34286.t1 | AT3G21190 | 62.371 | 388 | 140 | 2 | 3 | 385 | 36 | 422 | 0.0 | 511 |
| MS.gene34286.t1 | AT1G51630 | 64.525 | 358 | 126 | 1 | 28 | 385 | 67 | 423 | 1.24e-179 | 506 |
| MS.gene34286.t1 | AT1G38065 | 26.648 | 349 | 206 | 9 | 52 | 355 | 26 | 369 | 7.30e-28 | 114 |
| MS.gene34286.t1 | AT1G38065 | 26.648 | 349 | 206 | 9 | 52 | 355 | 36 | 379 | 9.93e-28 | 114 |
| MS.gene34286.t1 | AT1G38131 | 26.648 | 349 | 206 | 9 | 52 | 355 | 155 | 498 | 1.24e-27 | 114 |
| MS.gene34286.t1 | AT5G64600 | 28.686 | 373 | 208 | 13 | 25 | 355 | 88 | 444 | 5.36e-27 | 112 |
| MS.gene34286.t1 | AT1G20550 | 27.520 | 367 | 215 | 13 | 44 | 377 | 101 | 449 | 1.01e-25 | 109 |
| MS.gene34286.t1 | AT1G76270 | 28.529 | 340 | 200 | 12 | 49 | 355 | 103 | 432 | 1.89e-25 | 108 |
| MS.gene34286.t1 | AT4G38390 | 26.744 | 344 | 207 | 11 | 47 | 355 | 118 | 451 | 1.25e-23 | 102 |
| MS.gene34286.t1 | AT4G16650 | 28.446 | 341 | 198 | 11 | 50 | 355 | 120 | 449 | 2.24e-22 | 99.4 |
| MS.gene34286.t1 | AT4G16650 | 28.446 | 341 | 198 | 11 | 50 | 355 | 120 | 449 | 2.24e-22 | 99.4 |
| MS.gene34286.t1 | AT3G26370 | 23.430 | 414 | 256 | 12 | 14 | 374 | 112 | 517 | 3.03e-22 | 99.0 |
| MS.gene34286.t1 | AT3G02250 | 25.287 | 348 | 198 | 14 | 49 | 350 | 103 | 434 | 1.25e-20 | 94.0 |
| MS.gene34286.t1 | AT5G65470 | 23.177 | 384 | 223 | 13 | 29 | 344 | 60 | 439 | 1.95e-20 | 93.2 |
| MS.gene34286.t1 | AT2G03280 | 25.000 | 340 | 208 | 12 | 52 | 353 | 88 | 418 | 4.68e-20 | 92.0 |
| MS.gene34286.t1 | AT1G35510 | 24.791 | 359 | 221 | 9 | 30 | 344 | 136 | 489 | 4.87e-20 | 92.4 |
| MS.gene34286.t1 | AT5G15740 | 24.629 | 337 | 206 | 13 | 53 | 350 | 107 | 434 | 5.57e-20 | 92.0 |
| MS.gene34286.t1 | AT1G04910 | 24.074 | 378 | 229 | 14 | 41 | 379 | 81 | 439 | 5.76e-20 | 92.0 |
| MS.gene34286.t1 | AT5G63390 | 23.529 | 408 | 237 | 15 | 29 | 378 | 134 | 524 | 2.20e-19 | 90.1 |
| MS.gene34286.t1 | AT2G01480 | 22.388 | 402 | 254 | 11 | 29 | 378 | 130 | 525 | 5.33e-17 | 83.2 |
| MS.gene34286.t1 | AT2G01480 | 22.992 | 361 | 227 | 9 | 29 | 344 | 130 | 484 | 7.22e-17 | 82.8 |
| MS.gene34286.t1 | AT1G14970 | 23.077 | 403 | 251 | 12 | 29 | 378 | 11 | 407 | 2.59e-16 | 80.5 |
| MS.gene34286.t1 | AT2G03280 | 23.433 | 367 | 207 | 13 | 52 | 353 | 88 | 445 | 3.98e-16 | 80.1 |
| MS.gene34286.t1 | AT1G14970 | 23.077 | 403 | 251 | 12 | 29 | 378 | 131 | 527 | 4.65e-16 | 80.1 |
| MS.gene34286.t1 | AT2G37980 | 22.959 | 392 | 243 | 14 | 11 | 355 | 174 | 553 | 1.94e-14 | 75.5 |
| MS.gene34286.t1 | AT3G26370 | 24.138 | 232 | 157 | 6 | 14 | 229 | 112 | 340 | 4.05e-14 | 73.6 |
| MS.gene34286.t1 | AT5G01100 | 21.467 | 368 | 233 | 12 | 29 | 355 | 191 | 543 | 1.37e-13 | 72.8 |
Find 87 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCCTTTGATCTATAAAT+TGG | 0.210218 | 4.3:-87161489 | None:intergenic |
| TTCTGGTAAAACACAAATAT+TGG | 0.269941 | 4.3:+87162408 | MS.gene34286:CDS |
| CTTAGCTATGTATGGAAGTT+TGG | 0.303748 | 4.3:+87161590 | MS.gene34286:CDS |
| ATTCAGAATCTTTAGAATCT+AGG | 0.306927 | 4.3:-87162285 | None:intergenic |
| TACAAGGATAATAAATTTCC+AGG | 0.315137 | 4.3:+87160163 | None:intergenic |
| TAATCTTCGGTAACCCGGTT+AGG | 0.354107 | 4.3:-87161447 | None:intergenic |
| GACTTTCTCATGTTTATTGA+AGG | 0.356575 | 4.3:-87161534 | None:intergenic |
| TCGACAAGATCATGTATTTC+CGG | 0.357773 | 4.3:-87161621 | None:intergenic |
| ACACATGTAAGAAAGAATAT+AGG | 0.360475 | 4.3:+87160229 | MS.gene34286:CDS |
| CTGCTGTGAAGGTCCCTAAC+CGG | 0.377281 | 4.3:+87161433 | MS.gene34286:CDS |
| ATGCGAACGTAGCTGGTAAA+AGG | 0.377684 | 4.3:+87162380 | MS.gene34286:CDS |
| TCAATAAACATGAGAAAGTC+AGG | 0.380362 | 4.3:+87161537 | MS.gene34286:CDS |
| CACATGTAAGAAAGAATATA+GGG | 0.382191 | 4.3:+87160230 | MS.gene34286:CDS |
| TGATAGCCTTGATTCTCTTA+AGG | 0.386325 | 4.3:+87161863 | MS.gene34286:CDS |
| CATCATTATCATCATTTCCT+TGG | 0.387233 | 4.3:-87161740 | None:intergenic |
| GTTGAGATGTTGAACAAGAA+AGG | 0.397949 | 4.3:+87161714 | MS.gene34286:CDS |
| GAGAAAGATTGGTATTGATA+AGG | 0.398684 | 4.3:+87161806 | MS.gene34286:CDS |
| AGATTCTAAAGATTCTGAAT+TGG | 0.399183 | 4.3:+87162288 | MS.gene34286:CDS |
| ATTGCATGCTTAGCTATGTA+TGG | 0.412550 | 4.3:+87161582 | MS.gene34286:CDS |
| TAAGAAAGAATATAGGGCTT+TGG | 0.414895 | 4.3:+87160236 | MS.gene34286:CDS |
| AATCTCTTGTGCATTGAAAC+AGG | 0.427632 | 4.3:-87161772 | None:intergenic |
| GGTTGGCTTCCTCTAATGTC+AGG | 0.452126 | 4.3:-87161156 | None:intergenic |
| TTGAATGGTTTACCTGAGAT+AGG | 0.452979 | 4.3:-87160480 | None:intergenic |
| CTATTGTATGCGAACGTAGC+TGG | 0.454060 | 4.3:+87162373 | MS.gene34286:CDS |
| CCGTGTTGGGTTAAGCCGTC+TGG | 0.456324 | 4.3:+87160283 | MS.gene34286:CDS |
| GCTGGTAAAAGGATCGGTTC+TGG | 0.458320 | 4.3:+87162391 | MS.gene34286:CDS |
| CTTGTGATCCCTGACATTAG+AGG | 0.462574 | 4.3:+87161147 | MS.gene34286:CDS |
| AGCCGATGAATCTGAAATTA+CGG | 0.462609 | 4.3:-87162437 | None:intergenic |
| TGGACCATTGGTTAATGAAA+AGG | 0.468674 | 4.3:-87160449 | None:intergenic |
| TACAATAGACCCGAAATTGC+TGG | 0.469638 | 4.3:-87162358 | None:intergenic |
| CAATTTATTTGACACAATCA+AGG | 0.470225 | 4.3:+87161835 | MS.gene34286:CDS |
| AACTTTGTCTTCTTATCCGC+CGG | 0.478466 | 4.3:-87162262 | None:intergenic |
| TGACGAGTTAAAACCGTGTT+GGG | 0.478923 | 4.3:+87160270 | MS.gene34286:CDS |
| CGAACCAATTTATAGATCAA+AGG | 0.484845 | 4.3:+87161485 | MS.gene34286:CDS |
| GAACCAATTTATAGATCAAA+GGG | 0.484926 | 4.3:+87161486 | MS.gene34286:CDS |
| GTTGCATCATCTGTTGATCC+TGG | 0.495630 | 4.3:-87160181 | None:intergenic |
| CTATGTAATCTTCGGTAACC+CGG | 0.496129 | 4.3:-87161452 | None:intergenic |
| ACATGATCTTGTCGACTCAA+TGG | 0.503901 | 4.3:+87161629 | MS.gene34286:CDS |
| AGCCGTAATTTCAGATTCAT+CGG | 0.504226 | 4.3:+87162435 | MS.gene34286:CDS |
| GACATTAGAGGAAGCCAACC+TGG | 0.505026 | 4.3:+87161159 | MS.gene34286:CDS |
| AATCTTCGGTAACCCGGTTA+GGG | 0.507255 | 4.3:-87161446 | None:intergenic |
| AGACGGTCAATTTATTGCTG+TGG | 0.514073 | 4.3:+87161683 | MS.gene34286:CDS |
| TGGAAGTTTGGAGTTGCAGC+CGG | 0.514488 | 4.3:+87161602 | MS.gene34286:CDS |
| TTGTCGACTCAATGGTTGAA+AGG | 0.530466 | 4.3:+87161637 | MS.gene34286:CDS |
| AACCTATGAAAATGTAAAGA+TGG | 0.530585 | 4.3:+87160201 | MS.gene34286:CDS |
| GTAATTGTGGCTAGATATCT+CGG | 0.530926 | 4.3:+87161117 | MS.gene34286:CDS |
| TTCATGTCTCAGGAACTTTG+AGG | 0.534152 | 4.3:+87161317 | MS.gene34286:intron |
| AAAGAATATAGGGCTTTGGA+AGG | 0.536631 | 4.3:+87160240 | MS.gene34286:CDS |
| TGCTGTGAAGGTCCCTAACC+GGG | 0.540265 | 4.3:+87161434 | MS.gene34286:CDS |
| GTGTCGAGCTATGTAATCTT+CGG | 0.540315 | 4.3:-87161460 | None:intergenic |
| GATGAATCTGAAATTACGGC+TGG | 0.551992 | 4.3:-87162433 | None:intergenic |
| TCCAGAGTACCACCTATCTC+AGG | 0.558813 | 4.3:+87160468 | MS.gene34286:CDS |
| ACCTGAGATAGGTGGTACTC+TGG | 0.562659 | 4.3:-87160469 | None:intergenic |
| CAAGGAAATGATGATAATGA+TGG | 0.567082 | 4.3:+87161741 | MS.gene34286:CDS |
| TAGGTGGTACTCTGGACCAT+TGG | 0.568629 | 4.3:-87160461 | None:intergenic |
| ACAGGTCCTTAAGAGAATCA+AGG | 0.568795 | 4.3:-87161869 | None:intergenic |
| GATAGCAGATGCAGTAATTG+TGG | 0.569998 | 4.3:+87161104 | MS.gene34286:intron |
| CTGACGAGTTAAAACCGTGT+TGG | 0.574512 | 4.3:+87160269 | MS.gene34286:CDS |
| TTATTTGACACAATCAAGGT+GGG | 0.575583 | 4.3:+87161839 | MS.gene34286:CDS |
| GACGAAGTGGAGCAGACAGA+CGG | 0.578720 | 4.3:+87160418 | MS.gene34286:intron |
| GTTGGCTTCCTCTAATGTCA+GGG | 0.580467 | 4.3:-87161155 | None:intergenic |
| ACGAAGTGGAGCAGACAGAC+GGG | 0.590735 | 4.3:+87160419 | MS.gene34286:CDS |
| AACGTAGCTGGTAAAAGGAT+CGG | 0.594479 | 4.3:+87162385 | MS.gene34286:CDS |
| CATGAAAAGCATGGAAGGAG+TGG | 0.595034 | 4.3:+87161362 | MS.gene34286:CDS |
| TCGATGGTTGGCAGACGAAG+TGG | 0.598053 | 4.3:+87160405 | MS.gene34286:intron |
| GTGTTCATGAAAAGCATGGA+AGG | 0.599368 | 4.3:+87161357 | MS.gene34286:CDS |
| ATACATAGCTAAGCATGCAA+TGG | 0.606973 | 4.3:-87161580 | None:intergenic |
| AGAACTAACCTCTTGTCACC+AGG | 0.607111 | 4.3:-87161177 | None:intergenic |
| TTGAACAAGAAAGGTTGCCA+AGG | 0.610391 | 4.3:+87161723 | MS.gene34286:CDS |
| CTAACCTCTTGTCACCAGGT+TGG | 0.610952 | 4.3:-87161173 | None:intergenic |
| AATTTAATATTACCTCCAGA+CGG | 0.612585 | 4.3:-87160298 | None:intergenic |
| ATAGATCAAAGGGAAACGTA+AGG | 0.616496 | 4.3:+87161496 | MS.gene34286:CDS |
| TTTATTTGACACAATCAAGG+TGG | 0.619794 | 4.3:+87161838 | MS.gene34286:CDS |
| GTTGCAGGAGTCAATCATGC+CGG | 0.628375 | 4.3:+87162243 | MS.gene34286:intron |
| AAGAATATAGGGCTTTGGAA+GGG | 0.632512 | 4.3:+87160241 | MS.gene34286:CDS |
| AATAACAAGAATATGCAAAG+TGG | 0.644534 | 4.3:-87162501 | None:intergenic |
| GAAGCCAACCTGGTGACAAG+AGG | 0.647434 | 4.3:+87161169 | MS.gene34286:CDS |
| CAATAAACATGAGAAAGTCA+GGG | 0.649727 | 4.3:+87161538 | MS.gene34286:CDS |
| TGTTGGGTTAAGCCGTCTGG+AGG | 0.656915 | 4.3:+87160286 | MS.gene34286:CDS |
| CATGGAAGGAGTGGTCAAAG+TGG | 0.657662 | 4.3:+87161371 | MS.gene34286:CDS |
| GTTTCCTAAAACTTACACGA+AGG | 0.660480 | 4.3:+87161890 | MS.gene34286:CDS |
| TGACGTGTTCATGAAAAGCA+TGG | 0.665989 | 4.3:+87161353 | MS.gene34286:CDS |
| ACTTTAAGCCGAAAATCAGA+CGG | 0.668948 | 4.3:+87161666 | MS.gene34286:CDS |
| AATGGTTTACCTGAGATAGG+TGG | 0.671281 | 4.3:-87160477 | None:intergenic |
| GCAGGAGTCAATCATGCCGG+CGG | 0.677301 | 4.3:+87162246 | MS.gene34286:intron |
| TGATTGTGTCAAATAAATTG+TGG | 0.680581 | 4.3:-87161832 | None:intergenic |
| CCAGACGGCTTAACCCAACA+CGG | 0.681147 | 4.3:-87160283 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAGAGAAAATAAAGAA+TGG | - | chr4.3:87161030-87161049 | None:intergenic | 20.0% |
| !! | AAATTGTGTTAAATGTAAAG+TGG | - | chr4.3:87160803-87160822 | None:intergenic | 20.0% |
| !! | CTTTACATTTAACACAATTT+AGG | + | chr4.3:87160803-87160822 | MS.gene34286:intron | 20.0% |
| !! | TAATAGATTCATATTGAAGT+GGG | - | chr4.3:87160779-87160798 | None:intergenic | 20.0% |
| !! | TTAATAGATTCATATTGAAG+TGG | - | chr4.3:87160780-87160799 | None:intergenic | 20.0% |
| !!! | ATTAATTCATATTTTGTCGA+TGG | + | chr4.3:87160389-87160408 | MS.gene34286:intron | 20.0% |
| !!! | CTTCAAGTTTATATCAATTT+TGG | - | chr4.3:87160695-87160714 | None:intergenic | 20.0% |
| ! | AACCTATGAAAATGTAAAGA+TGG | + | chr4.3:87160201-87160220 | MS.gene34286:CDS | 25.0% |
| ! | AATAACAAGAATATGCAAAG+TGG | - | chr4.3:87162504-87162523 | None:intergenic | 25.0% |
| ! | AATTTAATATTACCTCCAGA+CGG | - | chr4.3:87160301-87160320 | None:intergenic | 25.0% |
| ! | ACACATGTAAGAAAGAATAT+AGG | + | chr4.3:87160229-87160248 | MS.gene34286:CDS | 25.0% |
| ! | ATTAGTGATGTAAGATATTG+CGG | + | chr4.3:87160543-87160562 | MS.gene34286:intron | 25.0% |
| ! | CAATTTATTTGACACAATCA+AGG | + | chr4.3:87161835-87161854 | MS.gene34286:CDS | 25.0% |
| ! | CACATGTAAGAAAGAATATA+GGG | + | chr4.3:87160230-87160249 | MS.gene34286:CDS | 25.0% |
| ! | GAACCAATTTATAGATCAAA+GGG | + | chr4.3:87161486-87161505 | MS.gene34286:CDS | 25.0% |
| ! | GCAAAAAAAGCTTCAAAATA+TGG | - | chr4.3:87160718-87160737 | None:intergenic | 25.0% |
| ! | GTCATTATTGTATATTTAGG+TGG | + | chr4.3:87160633-87160652 | MS.gene34286:intron | 25.0% |
| ! | TACATTTAACACAATTTAGG+TGG | + | chr4.3:87160806-87160825 | MS.gene34286:intron | 25.0% |
| ! | TGATTGTGTCAAATAAATTG+TGG | - | chr4.3:87161835-87161854 | None:intergenic | 25.0% |
| ! | TTCTGGTAAAACACAAATAT+TGG | + | chr4.3:87162408-87162427 | MS.gene34286:CDS | 25.0% |
| ! | TTTCCCTTTGATCTATAAAT+TGG | - | chr4.3:87161492-87161511 | None:intergenic | 25.0% |
| !! | AGATTCTAAAGATTCTGAAT+TGG | + | chr4.3:87162288-87162307 | MS.gene34286:CDS | 25.0% |
| !! | AGTCTTTTCATAACTATCAT+TGG | - | chr4.3:87160922-87160941 | None:intergenic | 25.0% |
| !! | ATCAAAATGAGGATTTTTGT+TGG | + | chr4.3:87160519-87160538 | MS.gene34286:intron | 25.0% |
| !! | ATCCATCTTTACATTTTCAT+AGG | - | chr4.3:87160206-87160225 | None:intergenic | 25.0% |
| !! | CAAATTTTACAATACTGCAT+TGG | - | chr4.3:87160998-87161017 | None:intergenic | 25.0% |
| !! | CAAGTTTATATCAATTTTGG+AGG | - | chr4.3:87160692-87160711 | None:intergenic | 25.0% |
| !! | CTTTTAGTATGAAAGATTGT+AGG | - | chr4.3:87162191-87162210 | None:intergenic | 25.0% |
| !! | TAGTAAATTTGCTTACTTTC+TGG | + | chr4.3:87162070-87162089 | MS.gene34286:intron | 25.0% |
| !! | TTTATACACCGAATCTTTTA+TGG | - | chr4.3:87161205-87161224 | None:intergenic | 25.0% |
| !! | TTTTGCTTATATTTCGTTCT+GGG | + | chr4.3:87161260-87161279 | MS.gene34286:intron | 25.0% |
| !!! | ATTCAGAATCTTTAGAATCT+AGG | - | chr4.3:87162288-87162307 | None:intergenic | 25.0% |
| !!! | GGTGTCATTATTGTATATTT+AGG | + | chr4.3:87160630-87160649 | MS.gene34286:intron | 25.0% |
| !!! | TGAATGAATTGATTTTGTAG+AGG | - | chr4.3:87160837-87160856 | None:intergenic | 25.0% |
| !!! | TGCATATTCTTGTTATTGTT+AGG | + | chr4.3:87162507-87162526 | MS.gene34286:CDS | 25.0% |
| !!! | TTTTTAGTTGTTACATGAGA+AGG | - | chr4.3:87161408-87161427 | None:intergenic | 25.0% |
| AAATACAATCCAAACGCATA+TGG | - | chr4.3:87160350-87160369 | None:intergenic | 30.0% | |
| ACTACTACTAAGTTTGTGTT+TGG | - | chr4.3:87160884-87160903 | None:intergenic | 30.0% | |
| AGAAGAAGGAAATCATCTAA+GGG | - | chr4.3:87160596-87160615 | None:intergenic | 30.0% | |
| CAATAAACATGAGAAAGTCA+GGG | + | chr4.3:87161538-87161557 | MS.gene34286:CDS | 30.0% | |
| CACATTCACGATCAATAATT+TGG | + | chr4.3:87161232-87161251 | MS.gene34286:intron | 30.0% | |
| CATCATTATCATCATTTCCT+TGG | - | chr4.3:87161743-87161762 | None:intergenic | 30.0% | |
| CATCTAAGGGAAAATATCTT+TGG | - | chr4.3:87160583-87160602 | None:intergenic | 30.0% | |
| CCTAATATAATTCATGTCTC+AGG | + | chr4.3:87161307-87161326 | MS.gene34286:intron | 30.0% | |
| CCTGAGACATGAATTATATT+AGG | - | chr4.3:87161310-87161329 | None:intergenic | 30.0% | |
| CGAACCAATTTATAGATCAA+AGG | + | chr4.3:87161485-87161504 | MS.gene34286:CDS | 30.0% | |
| GACTTTCTCATGTTTATTGA+AGG | - | chr4.3:87161537-87161556 | None:intergenic | 30.0% | |
| TAAAAAAATTGCTGCTGTGA+AGG | + | chr4.3:87161422-87161441 | MS.gene34286:CDS | 30.0% | |
| TAAGAAAGAATATAGGGCTT+TGG | + | chr4.3:87160236-87160255 | MS.gene34286:CDS | 30.0% | |
| TCAATAAACATGAGAAAGTC+AGG | + | chr4.3:87161537-87161556 | MS.gene34286:CDS | 30.0% | |
| TGTATATTTAGGTGGATGTT+TGG | + | chr4.3:87160641-87160660 | MS.gene34286:intron | 30.0% | |
| TTATTTGACACAATCAAGGT+GGG | + | chr4.3:87161839-87161858 | MS.gene34286:CDS | 30.0% | |
| TTCCTCTTAAAAAATGTTGC+AGG | + | chr4.3:87162228-87162247 | MS.gene34286:intron | 30.0% | |
| TTTATTTGACACAATCAAGG+TGG | + | chr4.3:87161838-87161857 | MS.gene34286:CDS | 30.0% | |
| TTTGCTTATATTTCGTTCTG+GGG | + | chr4.3:87161261-87161280 | MS.gene34286:intron | 30.0% | |
| ! | AATAATGACACCGTTTCTTT+TGG | - | chr4.3:87160622-87160641 | None:intergenic | 30.0% |
| ! | AGTTCTGACCATAAAAGATT+CGG | + | chr4.3:87161194-87161213 | MS.gene34286:intron | 30.0% |
| ! | ATATGCAAAGTGGTTTTTCT+TGG | - | chr4.3:87162494-87162513 | None:intergenic | 30.0% |
| ! | ATTCATATTTTGTCGATGGT+TGG | + | chr4.3:87160393-87160412 | MS.gene34286:intron | 30.0% |
| ! | CAAGGAAATGATGATAATGA+TGG | + | chr4.3:87161741-87161760 | MS.gene34286:CDS | 30.0% |
| ! | GGTTTTTCTTGGAGATATAA+GGG | - | chr4.3:87162483-87162502 | None:intergenic | 30.0% |
| ! | GTGATTGACTTATCAAAATG+AGG | + | chr4.3:87160508-87160527 | MS.gene34286:intron | 30.0% |
| ! | GTTACCTTTTCATTAACCAA+TGG | + | chr4.3:87160445-87160464 | MS.gene34286:CDS | 30.0% |
| ! | GTTTTGCTTATATTTCGTTC+TGG | + | chr4.3:87161259-87161278 | MS.gene34286:intron | 30.0% |
| ! | GTTTTTCTTGGAGATATAAG+GGG | - | chr4.3:87162482-87162501 | None:intergenic | 30.0% |
| ! | TAAATTGACCGTCTGATTTT+CGG | - | chr4.3:87161677-87161696 | None:intergenic | 30.0% |
| ! | TGGGTTGAACAATTAATTTG+AGG | - | chr4.3:87160760-87160779 | None:intergenic | 30.0% |
| ! | TGGTTTTTCTTGGAGATATA+AGG | - | chr4.3:87162484-87162503 | None:intergenic | 30.0% |
| ! | TTAAGTTTTGCAACTTTTCG+AGG | + | chr4.3:87160321-87160340 | MS.gene34286:intron | 30.0% |
| !! | GAGAAAGATTGGTATTGATA+AGG | + | chr4.3:87161806-87161825 | MS.gene34286:CDS | 30.0% |
| !! | TGTTTTTGTACCAGCAATTT+CGG | + | chr4.3:87162348-87162367 | MS.gene34286:CDS | 30.0% |
| !!! | TAAGTTTGTGTTTGGTTTTG+CGG | - | chr4.3:87160876-87160895 | None:intergenic | 30.0% |
| AACAGGGAAATGGAAAATGA+AGG | - | chr4.3:87161053-87161072 | None:intergenic | 35.0% | |
| AATCTCTTGTGCATTGAAAC+AGG | - | chr4.3:87161775-87161794 | None:intergenic | 35.0% | |
| ACTTTAAGCCGAAAATCAGA+CGG | + | chr4.3:87161666-87161685 | MS.gene34286:CDS | 35.0% | |
| AGCCGTAATTTCAGATTCAT+CGG | + | chr4.3:87162435-87162454 | MS.gene34286:CDS | 35.0% | |
| AGTCAATCACAACGATTGAA+TGG | - | chr4.3:87160498-87160517 | None:intergenic | 35.0% | |
| ATACATAGCTAAGCATGCAA+TGG | - | chr4.3:87161583-87161602 | None:intergenic | 35.0% | |
| ATAGATCAAAGGGAAACGTA+AGG | + | chr4.3:87161496-87161515 | MS.gene34286:CDS | 35.0% | |
| ATGAGAAAGTCAGGGAAAAA+AGG | + | chr4.3:87161546-87161565 | MS.gene34286:CDS | 35.0% | |
| ATTGCATGCTTAGCTATGTA+TGG | + | chr4.3:87161582-87161601 | MS.gene34286:CDS | 35.0% | |
| CTTAGCTATGTATGGAAGTT+TGG | + | chr4.3:87161590-87161609 | MS.gene34286:CDS | 35.0% | |
| GAGAAGAAGGAAATCATCTA+AGG | - | chr4.3:87160597-87160616 | None:intergenic | 35.0% | |
| GTAATTGTGGCTAGATATCT+CGG | + | chr4.3:87161117-87161136 | MS.gene34286:CDS | 35.0% | |
| GTTGAGATGTTGAACAAGAA+AGG | + | chr4.3:87161714-87161733 | MS.gene34286:CDS | 35.0% | |
| GTTTCCTAAAACTTACACGA+AGG | + | chr4.3:87161890-87161909 | MS.gene34286:CDS | 35.0% | |
| TATCTGGACATGAAGCATAT+TGG | - | chr4.3:87161088-87161107 | None:intergenic | 35.0% | |
| TCGACAAGATCATGTATTTC+CGG | - | chr4.3:87161624-87161643 | None:intergenic | 35.0% | |
| TGGTACAAAAACATCACTCT+CGG | - | chr4.3:87162341-87162360 | None:intergenic | 35.0% | |
| TTCTTCTCCACCAAAAGAAA+CGG | + | chr4.3:87160609-87160628 | MS.gene34286:intron | 35.0% | |
| TTGAATGGTTTACCTGAGAT+AGG | - | chr4.3:87160483-87160502 | None:intergenic | 35.0% | |
| TTGCTTATATTTCGTTCTGG+GGG | + | chr4.3:87161262-87161281 | MS.gene34286:intron | 35.0% | |
| ! | AGCCGATGAATCTGAAATTA+CGG | - | chr4.3:87162440-87162459 | None:intergenic | 35.0% |
| ! | GTTTTTGTACCAGCAATTTC+GGG | + | chr4.3:87162349-87162368 | MS.gene34286:CDS | 35.0% |
| ! | TGATAGCCTTGATTCTCTTA+AGG | + | chr4.3:87161863-87161882 | MS.gene34286:CDS | 35.0% |
| ! | TGGACCATTGGTTAATGAAA+AGG | - | chr4.3:87160452-87160471 | None:intergenic | 35.0% |
| !! | AAAGAATATAGGGCTTTGGA+AGG | + | chr4.3:87160240-87160259 | MS.gene34286:CDS | 35.0% |
| !! | AAGAATATAGGGCTTTGGAA+GGG | + | chr4.3:87160241-87160260 | MS.gene34286:CDS | 35.0% |
| !! | GATTTGCTAACTGTGTGAAT+GGG | - | chr4.3:87162009-87162028 | None:intergenic | 35.0% |
| !! | GCAGTGTTTTTGAGAAAGAT+TGG | + | chr4.3:87161795-87161814 | MS.gene34286:CDS | 35.0% |
| !! | TACAATACTGCATTGGCTTA+AGG | - | chr4.3:87160991-87161010 | None:intergenic | 35.0% |
| !!! | CTCCTGCAACATTTTTTAAG+AGG | - | chr4.3:87162233-87162252 | None:intergenic | 35.0% |
| !!! | TCGTGTAAGTTTTAGGAAAC+AGG | - | chr4.3:87161890-87161909 | None:intergenic | 35.0% |
| AACGTAGCTGGTAAAAGGAT+CGG | + | chr4.3:87162385-87162404 | MS.gene34286:CDS | 40.0% | |
| AACTTTGTCTTCTTATCCGC+CGG | - | chr4.3:87162265-87162284 | None:intergenic | 40.0% | |
| AATGGTTTACCTGAGATAGG+TGG | - | chr4.3:87160480-87160499 | None:intergenic | 40.0% | |
| ACAGGTCCTTAAGAGAATCA+AGG | - | chr4.3:87161872-87161891 | None:intergenic | 40.0% | |
| ACGAAAGAAGAACAGGGAAA+TGG | - | chr4.3:87161063-87161082 | None:intergenic | 40.0% | |
| AGACGGTCAATTTATTGCTG+TGG | + | chr4.3:87161683-87161702 | MS.gene34286:CDS | 40.0% | |
| CAATTACTGCATCTGCTATC+TGG | - | chr4.3:87161104-87161123 | None:intergenic | 40.0% | |
| CTATGTAATCTTCGGTAACC+CGG | - | chr4.3:87161455-87161474 | None:intergenic | 40.0% | |
| GACTATTCAAATGTGTGTGC+GGG | - | chr4.3:87162169-87162188 | None:intergenic | 40.0% | |
| GATAGCAGATGCAGTAATTG+TGG | + | chr4.3:87161104-87161123 | MS.gene34286:intron | 40.0% | |
| GGACTATTCAAATGTGTGTG+CGG | - | chr4.3:87162170-87162189 | None:intergenic | 40.0% | |
| GTCGTAGGATTGAGATAAGA+CGG | + | chr4.3:87162033-87162052 | MS.gene34286:intron | 40.0% | |
| GTGTCGAGCTATGTAATCTT+CGG | - | chr4.3:87161463-87161482 | None:intergenic | 40.0% | |
| TACAATAGACCCGAAATTGC+TGG | - | chr4.3:87162361-87162380 | None:intergenic | 40.0% | |
| TCACACAGTTAGCAAATCGA+TGG | + | chr4.3:87162011-87162030 | MS.gene34286:intron | 40.0% | |
| TGACGAGTTAAAACCGTGTT+GGG | + | chr4.3:87160270-87160289 | MS.gene34286:CDS | 40.0% | |
| TGACGTGTTCATGAAAAGCA+TGG | + | chr4.3:87161353-87161372 | MS.gene34286:CDS | 40.0% | |
| TTCATGTCTCAGGAACTTTG+AGG | + | chr4.3:87161317-87161336 | MS.gene34286:intron | 40.0% | |
| TTGAACAAGAAAGGTTGCCA+AGG | + | chr4.3:87161723-87161742 | MS.gene34286:CDS | 40.0% | |
| ! | AATGACACCGTTTCTTTTGG+TGG | - | chr4.3:87160619-87160638 | None:intergenic | 40.0% |
| ! | CTCACCTTCGTGTAAGTTTT+AGG | - | chr4.3:87161897-87161916 | None:intergenic | 40.0% |
| ! | GATGAATCTGAAATTACGGC+TGG | - | chr4.3:87162436-87162455 | None:intergenic | 40.0% |
| ! | GTGTTCATGAAAAGCATGGA+AGG | + | chr4.3:87161357-87161376 | MS.gene34286:CDS | 40.0% |
| ! | GTTTCTTTTGGTGGAGAAGA+AGG | - | chr4.3:87160610-87160629 | None:intergenic | 40.0% |
| ! | TGCTTATATTTCGTTCTGGG+GGG | + | chr4.3:87161263-87161282 | MS.gene34286:intron | 40.0% |
| !! | ACATGATCTTGTCGACTCAA+TGG | + | chr4.3:87161629-87161648 | MS.gene34286:CDS | 40.0% |
| !! | ATTGGTGACGAAAGAAGAAC+AGG | - | chr4.3:87161070-87161089 | None:intergenic | 40.0% |
| !! | CGATTTGCTAACTGTGTGAA+TGG | - | chr4.3:87162010-87162029 | None:intergenic | 40.0% |
| !! | TTGGTGACGAAAGAAGAACA+GGG | - | chr4.3:87161069-87161088 | None:intergenic | 40.0% |
| !! | TTGTCGACTCAATGGTTGAA+AGG | + | chr4.3:87161637-87161656 | MS.gene34286:CDS | 40.0% |
| AATCTTCGGTAACCCGGTTA+GGG | - | chr4.3:87161449-87161468 | None:intergenic | 45.0% | |
| AGAACTAACCTCTTGTCACC+AGG | - | chr4.3:87161180-87161199 | None:intergenic | 45.0% | |
| ATGAGCACACACACACACAT+GGG | + | chr4.3:87161956-87161975 | MS.gene34286:intron | 45.0% | |
| ATGCGAACGTAGCTGGTAAA+AGG | + | chr4.3:87162380-87162399 | MS.gene34286:CDS | 45.0% | |
| CTATTGTATGCGAACGTAGC+TGG | + | chr4.3:87162373-87162392 | MS.gene34286:CDS | 45.0% | |
| CTGACGAGTTAAAACCGTGT+TGG | + | chr4.3:87160269-87160288 | MS.gene34286:CDS | 45.0% | |
| CTGGGGGGGAATATAATTCA+TGG | + | chr4.3:87161278-87161297 | MS.gene34286:intron | 45.0% | |
| CTTGTGATCCCTGACATTAG+AGG | + | chr4.3:87161147-87161166 | MS.gene34286:CDS | 45.0% | |
| GATCGTTGGATGAGATCAGA+CGG | - | chr4.3:87162097-87162116 | None:intergenic | 45.0% | |
| GTCAGCAGATTAGTGATCGT+TGG | - | chr4.3:87162111-87162130 | None:intergenic | 45.0% | |
| GTTAGCAAATCGATGGTCGT+AGG | + | chr4.3:87162018-87162037 | MS.gene34286:intron | 45.0% | |
| GTTGCATCATCTGTTGATCC+TGG | - | chr4.3:87160184-87160203 | None:intergenic | 45.0% | |
| TAATCTTCGGTAACCCGGTT+AGG | - | chr4.3:87161450-87161469 | None:intergenic | 45.0% | |
| TGCTAACTGTGTGAATGGGT+GGG | - | chr4.3:87162005-87162024 | None:intergenic | 45.0% | |
| TGGTGTGAGTTTGTGATTGC+AGG | + | chr4.3:87162133-87162152 | MS.gene34286:intron | 45.0% | |
| TTGCTAACTGTGTGAATGGG+TGG | - | chr4.3:87162006-87162025 | None:intergenic | 45.0% | |
| ! | CATGAAAAGCATGGAAGGAG+TGG | + | chr4.3:87161362-87161381 | MS.gene34286:CDS | 45.0% |
| ! | GATCACTAATCTGCTGACTG+TGG | + | chr4.3:87162113-87162132 | MS.gene34286:intron | 45.0% |
| ! | GTTGGCTTCCTCTAATGTCA+GGG | - | chr4.3:87161158-87161177 | None:intergenic | 45.0% |
| !! | GCTTATATTTCGTTCTGGGG+GGG | + | chr4.3:87161264-87161283 | MS.gene34286:intron | 45.0% |
| ACCTGAGATAGGTGGTACTC+TGG | - | chr4.3:87160472-87160491 | None:intergenic | 50.0% | |
| ATGGGTGGGATTGTAACTGC+AGG | - | chr4.3:87161991-87162010 | None:intergenic | 50.0% | |
| CACACACACACACATGGGTT+TGG | + | chr4.3:87161961-87161980 | MS.gene34286:intron | 50.0% | |
| CATGAGCACACACACACACA+TGG | + | chr4.3:87161955-87161974 | MS.gene34286:intron | 50.0% | |
| CATGGAAGGAGTGGTCAAAG+TGG | + | chr4.3:87161371-87161390 | MS.gene34286:CDS | 50.0% | |
| CTAACCTCTTGTCACCAGGT+TGG | - | chr4.3:87161176-87161195 | None:intergenic | 50.0% | |
| GACATTAGAGGAAGCCAACC+TGG | + | chr4.3:87161159-87161178 | MS.gene34286:CDS | 50.0% | |
| GTTGCAGGAGTCAATCATGC+CGG | + | chr4.3:87162243-87162262 | MS.gene34286:intron | 50.0% | |
| TAGGTGGTACTCTGGACCAT+TGG | - | chr4.3:87160464-87160483 | None:intergenic | 50.0% | |
| TCGAGGAAGCCATATGCGTT+TGG | + | chr4.3:87160338-87160357 | MS.gene34286:intron | 50.0% | |
| ! | GCTGGTAAAAGGATCGGTTC+TGG | + | chr4.3:87162391-87162410 | MS.gene34286:CDS | 50.0% |
| ! | TCCAGAGTACCACCTATCTC+AGG | + | chr4.3:87160468-87160487 | MS.gene34286:CDS | 50.0% |
| ! | TGGAAGTTTGGAGTTGCAGC+CGG | + | chr4.3:87161602-87161621 | MS.gene34286:CDS | 50.0% |
| !! | GGTTGGCTTCCTCTAATGTC+AGG | - | chr4.3:87161159-87161178 | None:intergenic | 50.0% |
| ACGAAGTGGAGCAGACAGAC+GGG | + | chr4.3:87160419-87160438 | MS.gene34286:CDS | 55.0% | |
| CCAGACGGCTTAACCCAACA+CGG | - | chr4.3:87160286-87160305 | None:intergenic | 55.0% | |
| CTGCTGTGAAGGTCCCTAAC+CGG | + | chr4.3:87161433-87161452 | MS.gene34286:CDS | 55.0% | |
| GAAGCCAACCTGGTGACAAG+AGG | + | chr4.3:87161169-87161188 | MS.gene34286:CDS | 55.0% | |
| GACGAAGTGGAGCAGACAGA+CGG | + | chr4.3:87160418-87160437 | MS.gene34286:intron | 55.0% | |
| TCGATGGTTGGCAGACGAAG+TGG | + | chr4.3:87160405-87160424 | MS.gene34286:intron | 55.0% | |
| TGCTGTGAAGGTCCCTAACC+GGG | + | chr4.3:87161434-87161453 | MS.gene34286:CDS | 55.0% | |
| TGTTGGGTTAAGCCGTCTGG+AGG | + | chr4.3:87160286-87160305 | MS.gene34286:CDS | 55.0% | |
| CCGTGTTGGGTTAAGCCGTC+TGG | + | chr4.3:87160283-87160302 | MS.gene34286:CDS | 60.0% | |
| GCAGGAGTCAATCATGCCGG+CGG | + | chr4.3:87162246-87162265 | MS.gene34286:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 87160169 | 87162528 | 87160169 | ID=MS.gene34286 |
| chr4.3 | mRNA | 87160169 | 87162528 | 87160169 | ID=MS.gene34286.t1;Parent=MS.gene34286 |
| chr4.3 | exon | 87160169 | 87160307 | 87160169 | ID=MS.gene34286.t1.exon1;Parent=MS.gene34286.t1 |
| chr4.3 | CDS | 87160169 | 87160307 | 87160169 | ID=cds.MS.gene34286.t1;Parent=MS.gene34286.t1 |
| chr4.3 | exon | 87160419 | 87160489 | 87160419 | ID=MS.gene34286.t1.exon2;Parent=MS.gene34286.t1 |
| chr4.3 | CDS | 87160419 | 87160489 | 87160419 | ID=cds.MS.gene34286.t1;Parent=MS.gene34286.t1 |
| chr4.3 | exon | 87161105 | 87161190 | 87161105 | ID=MS.gene34286.t1.exon3;Parent=MS.gene34286.t1 |
| chr4.3 | CDS | 87161105 | 87161190 | 87161105 | ID=cds.MS.gene34286.t1;Parent=MS.gene34286.t1 |
| chr4.3 | exon | 87161329 | 87161911 | 87161329 | ID=MS.gene34286.t1.exon4;Parent=MS.gene34286.t1 |
| chr4.3 | CDS | 87161329 | 87161911 | 87161329 | ID=cds.MS.gene34286.t1;Parent=MS.gene34286.t1 |
| chr4.3 | exon | 87162250 | 87162528 | 87162250 | ID=MS.gene34286.t1.exon5;Parent=MS.gene34286.t1 |
| chr4.3 | CDS | 87162250 | 87162528 | 87162250 | ID=cds.MS.gene34286.t1;Parent=MS.gene34286.t1 |
| Gene Sequence |
| Protein sequence |
