AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28285

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28285.t1 MTR_2g024980 89.506 324 28 4 1 322 28 347 5.74e-180 501
MS.gene28285.t1 MTR_4g132690 52.484 322 89 8 1 320 34 293 3.31e-79 243
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28285.t1 AT4G22190 47.988 323 135 9 2 316 88 385 3.61e-69 221

Find 97 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGAGCTCCGGTAAAGAATT+TGG 0.172423 2.1:-64752237 None:intergenic
GGGTCGGGTTGTTGTGTTTC+CGG 0.215125 2.1:-64752216 None:intergenic
CCACGACGAACCTGCCATAC+TGG 0.248414 2.1:-64752377 None:intergenic
GCAGACCTGCTTCGTGAAAA+TGG 0.261675 2.1:-64752194 None:intergenic
TCGGGTTCTGGGACTGATTC+AGG 0.283839 2.1:-64751939 None:intergenic
GGTGGAGAAGAATCGGGTTC+TGG 0.284090 2.1:-64751951 None:intergenic
CGCCGGAGCAAGATGGTTTC+CGG 0.293698 2.1:+64752479 MS.gene28285:CDS
AAAGATTACGTAGATTAAAA+AGG 0.307097 2.1:-64752694 None:intergenic
TAGTGGTGGGGAGGAGGTGG+AGG 0.319105 2.1:-64751857 None:intergenic
AAACATAGTAACTTCTCATT+AGG 0.324071 2.1:+64752727 MS.gene28285:CDS
AAGGTGCACTGTTAACTTTC+CGG 0.333102 2.1:-64752265 None:intergenic
GAGAGTCAAAGTCGAGAAAA+TGG 0.339110 2.1:+64752309 MS.gene28285:CDS
TGTTATAGCAGGTGAAGATT+CGG 0.364621 2.1:-64751973 None:intergenic
AGGTGCACTGTTAACTTTCC+GGG 0.368465 2.1:-64752264 None:intergenic
GAGAAAATGGCCAAGTAGTC+CGG 0.370264 2.1:+64752322 MS.gene28285:CDS
TATTAGTGGTGGGGAGGAGG+TGG 0.372565 2.1:-64751860 None:intergenic
CTGTTAACTTTCCGGGTAAC+CGG 0.374939 2.1:-64752257 None:intergenic
TCGTCGGCGGTGTGAAGATT+TGG 0.386133 2.1:-64751807 None:intergenic
CAGAGTTGAATATCAATATA+TGG 0.386208 2.1:+64752171 MS.gene28285:CDS
GTGGAGAAGAATCGGGTTCT+GGG 0.391435 2.1:-64751950 None:intergenic
TCTGGGACTGATTCAGGAAC+CGG 0.401007 2.1:-64751933 None:intergenic
AGCAAGATGGTTTCCGGTGG+TGG 0.404009 2.1:+64752485 MS.gene28285:CDS
CCGGCACGACCCGGACTACT+TGG 0.404390 2.1:-64752332 None:intergenic
GAGTTTAGTGTTTGAGGTGG+TGG 0.405418 2.1:-64751891 None:intergenic
ACCCGACCCAAATTCTTTAC+CGG 0.411039 2.1:+64752230 MS.gene28285:CDS
GGAGCTCCGGTAAAGAATTT+GGG 0.415600 2.1:-64752236 None:intergenic
GTTATAGCAGGTGAAGATTC+GGG 0.421935 2.1:-64751972 None:intergenic
GGGTTTGAGTTTAGTGTTTG+AGG 0.423118 2.1:-64751897 None:intergenic
TTGAATGTTCCGATGTGTAT+TGG 0.430367 2.1:+64752539 MS.gene28285:CDS
TGAATGTTCCGATGTGTATT+GGG 0.434377 2.1:+64752540 MS.gene28285:CDS
GTTTCCGGTGGTGGTGGTGG+TGG 0.435098 2.1:+64752494 MS.gene28285:CDS
ATGGTTTCCGGTGGTGGTGG+TGG 0.437825 2.1:+64752491 MS.gene28285:CDS
GTTGTGGAAAAGATGGATTT+CGG 0.438234 2.1:-64751785 None:intergenic
AGTTTAGTGTTTGAGGTGGT+GGG 0.455628 2.1:-64751890 None:intergenic
GTGGTGGGGAGGAGGTGGAG+GGG 0.458908 2.1:-64751855 None:intergenic
GATTCAGGAACCGGGTTATG+AGG 0.458918 2.1:-64751924 None:intergenic
TGGCAGGTTCGTCGTGGTGG+TGG 0.461306 2.1:+64752383 MS.gene28285:CDS
CAAATTCTTTACCGGAGCTC+CGG 0.465045 2.1:+64752238 MS.gene28285:CDS
AGATTCGGGTGGAGAAGAAT+CGG 0.471237 2.1:-64751958 None:intergenic
AGATTTGGTTGTGGAAAAGA+TGG 0.473850 2.1:-64751792 None:intergenic
CACGACGAACCTGCCATACT+GGG 0.482007 2.1:-64752376 None:intergenic
CTTTCTCAGCTTCAAAACGT+TGG 0.490505 2.1:+64752015 MS.gene28285:CDS
TCCGGTAAAGAATTTGGGTC+GGG 0.493954 2.1:-64752231 None:intergenic
GTTAACCGCGGTGGTGGTGA+CGG 0.497115 2.1:+64752629 MS.gene28285:CDS
AGTGATGAGAACAGTGCTAT+TGG 0.497287 2.1:+64752587 MS.gene28285:CDS
TTACCGGAGCTCCGGTTACC+CGG 0.506889 2.1:+64752246 MS.gene28285:CDS
CCAAGTAGTCCGGGTCGTGC+CGG 0.507337 2.1:+64752332 MS.gene28285:CDS
TCGGAATAGCCCAGTATGGC+AGG 0.519408 2.1:+64752367 MS.gene28285:CDS
CATCATCATGATGAAGGAAG+TGG 0.520374 2.1:+64752665 MS.gene28285:CDS
GAAGAAGATTCTGTTATAGC+AGG 0.526422 2.1:-64751984 None:intergenic
AAGATGGTTTCCGGTGGTGG+TGG 0.526860 2.1:+64752488 MS.gene28285:CDS
AAGAAGCCACCGTGAGTCGC+CGG 0.528329 2.1:+64752462 MS.gene28285:CDS
GGAACCGGGTTATGAGGTGA+TGG 0.534503 2.1:-64751918 None:intergenic
CACCGGAAACCATCTTGCTC+CGG 0.536605 2.1:-64752481 None:intergenic
AGAAAATGGCCAAGTAGTCC+GGG 0.536858 2.1:+64752323 MS.gene28285:CDS
TAGTGTTTGAGGTGGTGGGT+CGG 0.538416 2.1:-64751886 None:intergenic
AGTGGTGGGGAGGAGGTGGA+GGG 0.543048 2.1:-64751856 None:intergenic
ATCATCATGATGAAGGAAGT+GGG 0.544681 2.1:+64752666 MS.gene28285:CDS
AGAGAAAGAAAAGAAGAACA+AGG 0.547468 2.1:+64752103 MS.gene28285:CDS
TTTCCGGGTAACCGGAGCTC+CGG 0.547570 2.1:-64752249 None:intergenic
GCGGCTGTTAACCGCGGTGG+TGG 0.548742 2.1:+64752623 MS.gene28285:CDS
ACATGAACACCGGCACGACC+CGG 0.550885 2.1:-64752341 None:intergenic
TCGGTCGGAATAGCCCAGTA+TGG 0.556659 2.1:+64752363 MS.gene28285:CDS
GAGTGTCATCATCATGATGA+AGG 0.557240 2.1:+64752659 MS.gene28285:CDS
GTGCCGGTGTTCATGTCGGT+CGG 0.562023 2.1:+64752348 MS.gene28285:CDS
CGTGAGTCGCCGGAGCAAGA+TGG 0.564778 2.1:+64752472 MS.gene28285:CDS
CTCCGGTAAAGAATTTGGGT+CGG 0.570478 2.1:-64752232 None:intergenic
GATTCGGGTGGAGAAGAATC+GGG 0.572217 2.1:-64751957 None:intergenic
CTGGGACTGATTCAGGAACC+GGG 0.579350 2.1:-64751932 None:intergenic
GAACCGGGTTATGAGGTGAT+GGG 0.591241 2.1:-64751917 None:intergenic
CATCTTGCTCCGGCGACTCA+CGG 0.592831 2.1:-64752471 None:intergenic
GTATGGCAGGTTCGTCGTGG+TGG 0.592873 2.1:+64752380 MS.gene28285:CDS
GGTCGTGCCGGTGTTCATGT+CGG 0.593131 2.1:+64752344 MS.gene28285:CDS
AACAGTGCTATTGGTGTGAG+TGG 0.596379 2.1:+64752596 MS.gene28285:CDS
GCGGAGTTGCTACGAGAACA+AGG 0.601840 2.1:-64752284 None:intergenic
AAACCCATCACCTCATAACC+CGG 0.607262 2.1:+64751914 MS.gene28285:CDS
GGCGCGGCTGTTAACCGCGG+TGG 0.610094 2.1:+64752620 MS.gene28285:CDS
ATTCCGACCGACATGAACAC+CGG 0.626898 2.1:-64752351 None:intergenic
TTTGAGTTTAGTGTTTGAGG+TGG 0.627811 2.1:-64751894 None:intergenic
TCATCATGATGAAGGAAGTG+GGG 0.641886 2.1:+64752667 MS.gene28285:CDS
AGTGCTATTGGTGTGAGTGG+TGG 0.642461 2.1:+64752599 MS.gene28285:CDS
TCAGAGCAACAAACGCAACA+AGG 0.643482 2.1:+64752413 MS.gene28285:CDS
CGGAGCAAGATGGTTTCCGG+TGG 0.646220 2.1:+64752482 MS.gene28285:CDS
CCAGTATGGCAGGTTCGTCG+TGG 0.656318 2.1:+64752377 MS.gene28285:CDS
TATTGGTGTGAGTGGTGGCG+CGG 0.657515 2.1:+64752604 MS.gene28285:CDS
TGTTCTCGTAGCAACTCCGC+CGG 0.659178 2.1:+64752287 MS.gene28285:CDS
CATCATGATGAAGGAAGTGG+GGG 0.665659 2.1:+64752668 MS.gene28285:CDS
ACCGTCGACGAAAAGTTCGT+CGG 0.668584 2.1:-64751823 None:intergenic
TCTCGACTTTGACTCTCCGG+CGG 0.671127 2.1:-64752303 None:intergenic
GCGGTGTGAAGATTTGGTTG+TGG 0.676329 2.1:-64751801 None:intergenic
AACCGCGGTGGTGGTGACGG+TGG 0.686027 2.1:+64752632 MS.gene28285:CDS
GGTGGCGCGGCTGTTAACCG+CGG 0.690879 2.1:+64752617 MS.gene28285:CDS
GTCGACGAAAAGTTCGTCGG+CGG 0.706404 2.1:-64751820 None:intergenic
CTTGCTCCGGCGACTCACGG+TGG 0.708798 2.1:-64752468 None:intergenic
TGTCTATACCCAATACACAT+CGG 0.715009 2.1:-64752548 None:intergenic
ATAGCAGGTGAAGATTCGGG+TGG 0.735025 2.1:-64751969 None:intergenic
TACCACCGTCACCACCACCG+CGG 0.769688 2.1:-64752634 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGATTACGTAGATTAAAA+AGG - chr2.1:64752697-64752716 None:intergenic 20.0%
! AAGAAGAAAGAGAGAAAAAA+CGG + chr2.1:64752128-64752147 MS.gene28285:CDS 25.0%
! CAGAGTTGAATATCAATATA+TGG + chr2.1:64752171-64752190 MS.gene28285:CDS 25.0%
!! AGAAGTTACTATGTTTTTCT+TGG - chr2.1:64752723-64752742 None:intergenic 25.0%
!! TGGAAAGATATTTTCAGAAA+AGG + chr2.1:64752035-64752054 MS.gene28285:CDS 25.0%
AAAGAGAGAAAAAACGGTAA+CGG + chr2.1:64752134-64752153 MS.gene28285:CDS 30.0%
AGAGAAAGAAAAGAAGAACA+AGG + chr2.1:64752103-64752122 MS.gene28285:CDS 30.0%
ATCATCATGATGAAGGAAGT+GGG + chr2.1:64752666-64752685 MS.gene28285:CDS 35.0%
GAAGAAGATTCTGTTATAGC+AGG - chr2.1:64751987-64752006 None:intergenic 35.0%
TGAATGTTCCGATGTGTATT+GGG + chr2.1:64752540-64752559 MS.gene28285:CDS 35.0%
TGTCTATACCCAATACACAT+CGG - chr2.1:64752551-64752570 None:intergenic 35.0%
TGTTATAGCAGGTGAAGATT+CGG - chr2.1:64751976-64751995 None:intergenic 35.0%
TTGAATGTTCCGATGTGTAT+TGG + chr2.1:64752539-64752558 MS.gene28285:CDS 35.0%
! AGATTTGGTTGTGGAAAAGA+TGG - chr2.1:64751795-64751814 None:intergenic 35.0%
! GTTGTGGAAAAGATGGATTT+CGG - chr2.1:64751788-64751807 None:intergenic 35.0%
! TTTGAGTTTAGTGTTTGAGG+TGG - chr2.1:64751897-64751916 None:intergenic 35.0%
AAGGTGCACTGTTAACTTTC+CGG - chr2.1:64752268-64752287 None:intergenic 40.0%
AGTGATGAGAACAGTGCTAT+TGG + chr2.1:64752587-64752606 MS.gene28285:CDS 40.0%
CATCATCATGATGAAGGAAG+TGG + chr2.1:64752665-64752684 MS.gene28285:CDS 40.0%
CTTTCTCAGCTTCAAAACGT+TGG + chr2.1:64752015-64752034 MS.gene28285:CDS 40.0%
GAGAGTCAAAGTCGAGAAAA+TGG + chr2.1:64752309-64752328 MS.gene28285:CDS 40.0%
GAGTGTCATCATCATGATGA+AGG + chr2.1:64752659-64752678 MS.gene28285:CDS 40.0%
GTTATAGCAGGTGAAGATTC+GGG - chr2.1:64751975-64751994 None:intergenic 40.0%
TCATCATGATGAAGGAAGTG+GGG + chr2.1:64752667-64752686 MS.gene28285:CDS 40.0%
! AGTTTAGTGTTTGAGGTGGT+GGG - chr2.1:64751893-64751912 None:intergenic 40.0%
! GGGTTTGAGTTTAGTGTTTG+AGG - chr2.1:64751900-64751919 None:intergenic 40.0%
! TTTTCTCGACTTTGACTCTC+CGG - chr2.1:64752309-64752328 None:intergenic 40.0%
AAACCCATCACCTCATAACC+CGG + chr2.1:64751914-64751933 MS.gene28285:CDS 45.0%
ACCCGACCCAAATTCTTTAC+CGG + chr2.1:64752230-64752249 MS.gene28285:CDS 45.0%
AGAAAATGGCCAAGTAGTCC+GGG + chr2.1:64752323-64752342 MS.gene28285:CDS 45.0%
AGATTCGGGTGGAGAAGAAT+CGG - chr2.1:64751961-64751980 None:intergenic 45.0%
AGGTGCACTGTTAACTTTCC+GGG - chr2.1:64752267-64752286 None:intergenic 45.0%
CAAATTCTTTACCGGAGCTC+CGG + chr2.1:64752238-64752257 MS.gene28285:CDS 45.0%
CATCATGATGAAGGAAGTGG+GGG + chr2.1:64752668-64752687 MS.gene28285:CDS 45.0%
CTCCGGTAAAGAATTTGGGT+CGG - chr2.1:64752235-64752254 None:intergenic 45.0%
CTGTTAACTTTCCGGGTAAC+CGG - chr2.1:64752260-64752279 None:intergenic 45.0%
GAGAAAATGGCCAAGTAGTC+CGG + chr2.1:64752322-64752341 MS.gene28285:CDS 45.0%
GGAGCTCCGGTAAAGAATTT+GGG - chr2.1:64752239-64752258 None:intergenic 45.0%
TCAGAGCAACAAACGCAACA+AGG + chr2.1:64752413-64752432 MS.gene28285:CDS 45.0%
TCCGGTAAAGAATTTGGGTC+GGG - chr2.1:64752234-64752253 None:intergenic 45.0%
! AACAGTGCTATTGGTGTGAG+TGG + chr2.1:64752596-64752615 MS.gene28285:CDS 45.0%
! GAGTTTAGTGTTTGAGGTGG+TGG - chr2.1:64751894-64751913 None:intergenic 45.0%
!! TATGGCCATTTTCACGAAGC+AGG + chr2.1:64752189-64752208 MS.gene28285:CDS 45.0%
!! TTTTATTAGTGGTGGGGAGG+AGG - chr2.1:64751866-64751885 None:intergenic 45.0%
!!! GGGTCGGTTTTATTAGTGGT+GGG - chr2.1:64751873-64751892 None:intergenic 45.0%
!!! GGTCGGTTTTATTAGTGGTG+GGG - chr2.1:64751872-64751891 None:intergenic 45.0%
!!! TGGGTCGGTTTTATTAGTGG+TGG - chr2.1:64751874-64751893 None:intergenic 45.0%
!!! TGGTGGGTCGGTTTTATTAG+TGG - chr2.1:64751877-64751896 None:intergenic 45.0%
ACCGTCGACGAAAAGTTCGT+CGG - chr2.1:64751826-64751845 None:intergenic 50.0%
ATAGCAGGTGAAGATTCGGG+TGG - chr2.1:64751972-64751991 None:intergenic 50.0%
ATTCCGACCGACATGAACAC+CGG - chr2.1:64752354-64752373 None:intergenic 50.0%
CGGAGCTCCGGTAAAGAATT+TGG - chr2.1:64752240-64752259 None:intergenic 50.0%
GAACCGGGTTATGAGGTGAT+GGG - chr2.1:64751920-64751939 None:intergenic 50.0%
GATTCAGGAACCGGGTTATG+AGG - chr2.1:64751927-64751946 None:intergenic 50.0%
GATTCGGGTGGAGAAGAATC+GGG - chr2.1:64751960-64751979 None:intergenic 50.0%
GCAGACCTGCTTCGTGAAAA+TGG - chr2.1:64752197-64752216 None:intergenic 50.0%
GTGGAGAAGAATCGGGTTCT+GGG - chr2.1:64751953-64751972 None:intergenic 50.0%
! AGTGCTATTGGTGTGAGTGG+TGG + chr2.1:64752599-64752618 MS.gene28285:CDS 50.0%
! GCGGTGTGAAGATTTGGTTG+TGG - chr2.1:64751804-64751823 None:intergenic 50.0%
! TCTGGGACTGATTCAGGAAC+CGG - chr2.1:64751936-64751955 None:intergenic 50.0%
! TTTTCACGAAGCAGGTCTGC+CGG + chr2.1:64752197-64752216 MS.gene28285:CDS 50.0%
!! TAGTGTTTGAGGTGGTGGGT+CGG - chr2.1:64751889-64751908 None:intergenic 50.0%
!!! CGGTTTTATTAGTGGTGGGG+AGG - chr2.1:64751869-64751888 None:intergenic 50.0%
AGCAAGATGGTTTCCGGTGG+TGG + chr2.1:64752485-64752504 MS.gene28285:CDS 55.0%
CACCGGAAACCATCTTGCTC+CGG - chr2.1:64752484-64752503 None:intergenic 55.0%
CACGACGAACCTGCCATACT+GGG - chr2.1:64752379-64752398 None:intergenic 55.0%
GCGGAGTTGCTACGAGAACA+AGG - chr2.1:64752287-64752306 None:intergenic 55.0%
GGAACCGGGTTATGAGGTGA+TGG - chr2.1:64751921-64751940 None:intergenic 55.0%
GGTGGAGAAGAATCGGGTTC+TGG - chr2.1:64751954-64751973 None:intergenic 55.0%
GTCGACGAAAAGTTCGTCGG+CGG - chr2.1:64751823-64751842 None:intergenic 55.0%
TCGGAATAGCCCAGTATGGC+AGG + chr2.1:64752367-64752386 MS.gene28285:CDS 55.0%
TCGGTCGGAATAGCCCAGTA+TGG + chr2.1:64752363-64752382 MS.gene28285:CDS 55.0%
TCGTCGGCGGTGTGAAGATT+TGG - chr2.1:64751810-64751829 None:intergenic 55.0%
TCTCGACTTTGACTCTCCGG+CGG - chr2.1:64752306-64752325 None:intergenic 55.0%
TGTTCTCGTAGCAACTCCGC+CGG + chr2.1:64752287-64752306 MS.gene28285:CDS 55.0%
! AAGATGGTTTCCGGTGGTGG+TGG + chr2.1:64752488-64752507 MS.gene28285:CDS 55.0%
! CTGGGACTGATTCAGGAACC+GGG - chr2.1:64751935-64751954 None:intergenic 55.0%
! GCCGACGAACTTTTCGTCGA+CGG + chr2.1:64751822-64751841 MS.gene28285:CDS 55.0%
! GGGTCGGGTTGTTGTGTTTC+CGG - chr2.1:64752219-64752238 None:intergenic 55.0%
! TATTAGTGGTGGGGAGGAGG+TGG - chr2.1:64751863-64751882 None:intergenic 55.0%
! TATTGGTGTGAGTGGTGGCG+CGG + chr2.1:64752604-64752623 MS.gene28285:CDS 55.0%
!! TCGGGTTCTGGGACTGATTC+AGG - chr2.1:64751942-64751961 None:intergenic 55.0%
AAGAAGCCACCGTGAGTCGC+CGG + chr2.1:64752462-64752481 MS.gene28285:CDS 60.0%
ACATGAACACCGGCACGACC+CGG - chr2.1:64752344-64752363 None:intergenic 60.0%
CATCTTGCTCCGGCGACTCA+CGG - chr2.1:64752474-64752493 None:intergenic 60.0%
CCACGACGAACCTGCCATAC+TGG - chr2.1:64752380-64752399 None:intergenic 60.0%
CCAGTATGGCAGGTTCGTCG+TGG + chr2.1:64752377-64752396 MS.gene28285:CDS 60.0%
CGCCGGAGCAAGATGGTTTC+CGG + chr2.1:64752479-64752498 MS.gene28285:CDS 60.0%
CGGAGCAAGATGGTTTCCGG+TGG + chr2.1:64752482-64752501 MS.gene28285:CDS 60.0%
GTATGGCAGGTTCGTCGTGG+TGG + chr2.1:64752380-64752399 MS.gene28285:CDS 60.0%
TTACCGGAGCTCCGGTTACC+CGG + chr2.1:64752246-64752265 MS.gene28285:CDS 60.0%
TTTCCGGGTAACCGGAGCTC+CGG - chr2.1:64752252-64752271 None:intergenic 60.0%
! GGTCGTGCCGGTGTTCATGT+CGG + chr2.1:64752344-64752363 MS.gene28285:CDS 60.0%
! GTGCCGGTGTTCATGTCGGT+CGG + chr2.1:64752348-64752367 MS.gene28285:CDS 60.0%
! GTTAACCGCGGTGGTGGTGA+CGG + chr2.1:64752629-64752648 MS.gene28285:CDS 60.0%
!! ATGGTTTCCGGTGGTGGTGG+TGG + chr2.1:64752491-64752510 MS.gene28285:CDS 60.0%
CCAAGTAGTCCGGGTCGTGC+CGG + chr2.1:64752332-64752351 MS.gene28285:CDS 65.0%
CGTGAGTCGCCGGAGCAAGA+TGG + chr2.1:64752472-64752491 MS.gene28285:CDS 65.0%
TACCACCGTCACCACCACCG+CGG - chr2.1:64752637-64752656 None:intergenic 65.0%
TCCACCACCACCACCACCAC+CGG - chr2.1:64752501-64752520 None:intergenic 65.0%
TGGCAGGTTCGTCGTGGTGG+TGG + chr2.1:64752383-64752402 MS.gene28285:CDS 65.0%
! AGTGGTGGGGAGGAGGTGGA+GGG - chr2.1:64751859-64751878 None:intergenic 65.0%
! TAGTGGTGGGGAGGAGGTGG+AGG - chr2.1:64751860-64751879 None:intergenic 65.0%
!! GTTTCCGGTGGTGGTGGTGG+TGG + chr2.1:64752494-64752513 MS.gene28285:CDS 65.0%
CCGGCACGACCCGGACTACT+TGG - chr2.1:64752335-64752354 None:intergenic 70.0%
CTTGCTCCGGCGACTCACGG+TGG - chr2.1:64752471-64752490 None:intergenic 70.0%
GCGGCTGTTAACCGCGGTGG+TGG + chr2.1:64752623-64752642 MS.gene28285:CDS 70.0%
GGTGGCGCGGCTGTTAACCG+CGG + chr2.1:64752617-64752636 MS.gene28285:CDS 70.0%
! GTGGTGGGGAGGAGGTGGAG+GGG - chr2.1:64751858-64751877 None:intergenic 70.0%
!! AACCGCGGTGGTGGTGACGG+TGG + chr2.1:64752632-64752651 MS.gene28285:CDS 70.0%
!! TCCGGTGGTGGTGGTGGTGG+TGG + chr2.1:64752497-64752516 MS.gene28285:CDS 70.0%
GGCGCGGCTGTTAACCGCGG+TGG + chr2.1:64752620-64752639 MS.gene28285:CDS 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 64751780 64752748 64751780 ID=MS.gene28285
chr2.1 mRNA 64751780 64752748 64751780 ID=MS.gene28285.t1;Parent=MS.gene28285
chr2.1 exon 64751780 64752748 64751780 ID=MS.gene28285.t1.exon1;Parent=MS.gene28285.t1
chr2.1 CDS 64751780 64752748 64751780 ID=cds.MS.gene28285.t1;Parent=MS.gene28285.t1
Gene Sequence

>MS.gene28285

ATGCTCCGAAATCCATCTTTTCCACAACCAAATCTTCACACCGCCGACGAACTTTTCGTCGACGGTGTTATTCTTCCCCTCCACCTCCTCCCCACCACTAATAAAACCGACCCACCACCTCAAACACTAAACTCAAACCCATCACCTCATAACCCGGTTCCTGAATCAGTCCCAGAACCCGATTCTTCTCCACCCGAATCTTCACCTGCTATAACAGAATCTTCTTCTTCAACAACTTTCTCAGCTTCAAAACGTTGGAAAGATATTTTCAGAAAAGGAGAGAAAAACAACAACACAGAAGATAAAGAGAAAGAGAAAGAGAAAGAGAAAGAAAAGAAGAACAAGGAGAAGAAGAAAGAGAGAAAAAACGGTAACGGTGCAAATTCTGCTGCAGAGTTGAATATCAATATATGGCCATTTTCACGAAGCAGGTCTGCCGGAAACACAACAACCCGACCCAAATTCTTTACCGGAGCTCCGGTTACCCGGAAAGTTAACAGTGCACCTTGTTCTCGTAGCAACTCCGCCGGAGAGTCAAAGTCGAGAAAATGGCCAAGTAGTCCGGGTCGTGCCGGTGTTCATGTCGGTCGGAATAGCCCAGTATGGCAGGTTCGTCGTGGTGGTGGAAAAAACTCAGAGCAACAAACGCAACAAGGTTCTAACATAGAGAAAGAGTTGAAGAAAGAAGCCACCGTGAGTCGCCGGAGCAAGATGGTTTCCGGTGGTGGTGGTGGTGGTGGAAAAGCTAAAATTTTGAGCTTGAATGTTCCGATGTGTATTGGGTATAGACATCATTTGAGTTGTAGAAGTGATGAGAACAGTGCTATTGGTGTGAGTGGTGGCGCGGCTGTTAACCGCGGTGGTGGTGACGGTGGTAGTGAGTGTCATCATCATGATGAAGGAAGTGGGGGTAACCTTTTTAATCTACGTAATCTTTTTACCAAGAAAAACATAGTAACTTCTCATTAG
Protein sequence

>MS.gene28285.t1

MLRNPSFPQPNLHTADELFVDGVILPLHLLPTTNKTDPPPQTLNSNPSPHNPVPESVPEPDSSPPESSPAITESSSSTTFSASKRWKDIFRKGEKNNNTEDKEKEKEKEKEKKNKEKKKERKNGNGANSAAELNINIWPFSRSRSAGNTTTRPKFFTGAPVTRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRNSPVWQVRRGGGKNSEQQTQQGSNIEKELKKEATVSRRSKMVSGGGGGGGKAKILSLNVPMCIGYRHHLSCRSDENSAIGVSGGAAVNRGGGDGGSECHHHDEGSGGNLFNLRNLFTKKNIVTSH