Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28443.t1 | XP_003630179.1 | 96.8 | 349 | 10 | 1 | 1 | 348 | 1 | 349 | 1.60E-182 | 648.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28443.t1 | Q9FGG3 | 62.3 | 332 | 121 | 3 | 1 | 329 | 3 | 333 | 3.5e-106 | 386.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28443.t1 | G7LC96 | 96.8 | 349 | 10 | 1 | 1 | 348 | 1 | 349 | 1.1e-182 | 648.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene28443 | MS.gene035645 | PPI |
| MS.gene28443 | MS.gene012466 | PPI |
| MS.gene57955 | MS.gene28443 | PPI |
| MS.gene28443 | MS.gene018396 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28443.t1 | MTR_8g092650 | 96.848 | 349 | 10 | 1 | 1 | 348 | 1 | 349 | 0.0 | 684 |
| MS.gene28443.t1 | MTR_8g092650 | 97.407 | 270 | 6 | 1 | 80 | 348 | 2 | 271 | 0.0 | 527 |
| MS.gene28443.t1 | MTR_3g095460 | 71.261 | 341 | 96 | 2 | 1 | 341 | 1 | 339 | 2.23e-170 | 478 |
| MS.gene28443.t1 | MTR_3g095420 | 50.606 | 330 | 160 | 2 | 1 | 328 | 3 | 331 | 3.32e-115 | 338 |
| MS.gene28443.t1 | MTR_3g095450 | 51.026 | 341 | 164 | 2 | 1 | 339 | 1 | 340 | 2.03e-113 | 334 |
| MS.gene28443.t1 | MTR_3g095440 | 49.560 | 341 | 169 | 2 | 1 | 339 | 1 | 340 | 1.96e-103 | 308 |
| MS.gene28443.t1 | MTR_6g036450 | 45.058 | 344 | 178 | 3 | 1 | 340 | 12 | 348 | 1.22e-97 | 293 |
| MS.gene28443.t1 | MTR_3g095440 | 48.450 | 258 | 130 | 2 | 1 | 256 | 1 | 257 | 1.63e-79 | 244 |
| MS.gene28443.t1 | MTR_1g030580 | 35.277 | 343 | 204 | 3 | 1 | 334 | 12 | 345 | 1.78e-71 | 227 |
| MS.gene28443.t1 | MTR_3g072530 | 35.735 | 347 | 210 | 4 | 1 | 339 | 10 | 351 | 1.65e-70 | 224 |
| MS.gene28443.t1 | MTR_3g072500 | 33.036 | 336 | 220 | 2 | 1 | 336 | 16 | 346 | 6.79e-69 | 221 |
| MS.gene28443.t1 | MTR_2g007990 | 38.182 | 330 | 202 | 2 | 6 | 335 | 16 | 343 | 6.68e-67 | 216 |
| MS.gene28443.t1 | MTR_3g072560 | 35.756 | 344 | 206 | 4 | 5 | 341 | 18 | 353 | 2.00e-66 | 215 |
| MS.gene28443.t1 | MTR_1g068630 | 34.278 | 353 | 213 | 6 | 1 | 346 | 11 | 351 | 2.97e-66 | 213 |
| MS.gene28443.t1 | MTR_1g074120 | 33.908 | 348 | 218 | 4 | 2 | 348 | 13 | 349 | 1.64e-65 | 211 |
| MS.gene28443.t1 | MTR_3g012420 | 34.897 | 341 | 208 | 4 | 2 | 336 | 14 | 346 | 2.05e-65 | 212 |
| MS.gene28443.t1 | MTR_1g023180 | 34.524 | 336 | 207 | 1 | 7 | 329 | 23 | 358 | 2.35e-65 | 212 |
| MS.gene28443.t1 | MTR_6g081840 | 36.119 | 335 | 213 | 1 | 14 | 348 | 19 | 352 | 4.11e-65 | 210 |
| MS.gene28443.t1 | MTR_1g074070 | 34.195 | 348 | 217 | 4 | 2 | 348 | 13 | 349 | 4.49e-65 | 210 |
| MS.gene28443.t1 | MTR_2g016710 | 34.694 | 343 | 217 | 1 | 5 | 347 | 8 | 343 | 5.07e-65 | 210 |
| MS.gene28443.t1 | MTR_3g112480 | 34.268 | 321 | 203 | 1 | 17 | 329 | 32 | 352 | 9.70e-65 | 210 |
| MS.gene28443.t1 | MTR_1g051120 | 33.333 | 351 | 221 | 4 | 2 | 348 | 13 | 354 | 2.08e-64 | 208 |
| MS.gene28443.t1 | MTR_8g041390 | 33.433 | 335 | 215 | 3 | 7 | 337 | 15 | 345 | 2.96e-64 | 209 |
| MS.gene28443.t1 | MTR_1g030600 | 36.257 | 342 | 208 | 3 | 2 | 339 | 15 | 350 | 3.80e-64 | 208 |
| MS.gene28443.t1 | MTR_2g027030 | 35.882 | 340 | 213 | 3 | 1 | 339 | 8 | 343 | 7.52e-64 | 207 |
| MS.gene28443.t1 | MTR_0096s0100 | 35.629 | 334 | 202 | 3 | 7 | 336 | 20 | 344 | 4.42e-63 | 205 |
| MS.gene28443.t1 | MTR_1g070175 | 32.759 | 348 | 221 | 2 | 2 | 345 | 13 | 351 | 7.59e-63 | 204 |
| MS.gene28443.t1 | MTR_7g100050 | 33.898 | 354 | 213 | 6 | 5 | 348 | 13 | 355 | 8.11e-62 | 202 |
| MS.gene28443.t1 | MTR_1g074160 | 33.807 | 352 | 214 | 6 | 1 | 346 | 9 | 347 | 1.20e-61 | 201 |
| MS.gene28443.t1 | MTR_2g007960 | 37.273 | 330 | 198 | 5 | 5 | 328 | 12 | 338 | 3.51e-61 | 201 |
| MS.gene28443.t1 | MTR_7g111830 | 37.003 | 327 | 200 | 3 | 6 | 328 | 8 | 332 | 4.04e-61 | 201 |
| MS.gene28443.t1 | MTR_1g073990 | 35.159 | 347 | 214 | 4 | 2 | 347 | 13 | 349 | 3.98e-59 | 194 |
| MS.gene28443.t1 | MTR_3g019050 | 34.146 | 328 | 207 | 3 | 8 | 333 | 21 | 341 | 3.99e-59 | 196 |
| MS.gene28443.t1 | MTR_8g006010 | 35.088 | 342 | 202 | 5 | 6 | 336 | 11 | 343 | 4.11e-58 | 192 |
| MS.gene28443.t1 | MTR_4g106720 | 32.012 | 328 | 217 | 2 | 6 | 332 | 12 | 334 | 4.37e-58 | 192 |
| MS.gene28443.t1 | MTR_3g072520 | 34.571 | 350 | 219 | 5 | 1 | 346 | 5 | 348 | 7.68e-58 | 192 |
| MS.gene28443.t1 | MTR_4g094340 | 34.384 | 349 | 212 | 7 | 5 | 347 | 9 | 346 | 1.74e-57 | 190 |
| MS.gene28443.t1 | MTR_5g069040 | 31.356 | 354 | 229 | 3 | 2 | 347 | 15 | 362 | 1.85e-57 | 191 |
| MS.gene28443.t1 | MTR_4g094340 | 34.384 | 349 | 212 | 7 | 5 | 347 | 27 | 364 | 2.63e-57 | 190 |
| MS.gene28443.t1 | MTR_4g129650 | 34.104 | 346 | 209 | 6 | 6 | 341 | 9 | 345 | 1.12e-56 | 189 |
| MS.gene28443.t1 | MTR_1g074020 | 32.153 | 339 | 218 | 4 | 1 | 338 | 9 | 336 | 1.79e-56 | 187 |
| MS.gene28443.t1 | MTR_2g007260 | 34.911 | 338 | 218 | 2 | 6 | 341 | 15 | 352 | 2.50e-56 | 189 |
| MS.gene28443.t1 | MTR_4g094362 | 34.154 | 325 | 209 | 3 | 5 | 328 | 14 | 334 | 5.82e-56 | 187 |
| MS.gene28443.t1 | MTR_5g068790 | 31.503 | 346 | 225 | 3 | 2 | 341 | 15 | 354 | 9.62e-56 | 186 |
| MS.gene28443.t1 | MTR_5g034990 | 33.432 | 338 | 213 | 5 | 6 | 341 | 15 | 342 | 2.45e-54 | 182 |
| MS.gene28443.t1 | MTR_2g016710 | 33.775 | 302 | 193 | 1 | 5 | 306 | 8 | 302 | 4.95e-54 | 180 |
| MS.gene28443.t1 | MTR_4g094360 | 34.259 | 324 | 209 | 2 | 6 | 328 | 15 | 335 | 1.36e-53 | 181 |
| MS.gene28443.t1 | MTR_2g007970 | 34.234 | 333 | 214 | 3 | 6 | 337 | 13 | 341 | 1.59e-53 | 181 |
| MS.gene28443.t1 | MTR_8g006090 | 35.072 | 345 | 208 | 5 | 6 | 339 | 12 | 351 | 1.89e-53 | 180 |
| MS.gene28443.t1 | MTR_3g090550 | 31.519 | 349 | 228 | 4 | 2 | 348 | 3 | 342 | 2.04e-53 | 179 |
| MS.gene28443.t1 | MTR_5g021160 | 31.180 | 356 | 222 | 6 | 2 | 346 | 4 | 347 | 3.66e-53 | 179 |
| MS.gene28443.t1 | MTR_4g094342 | 31.034 | 319 | 220 | 0 | 5 | 323 | 13 | 331 | 3.90e-53 | 179 |
| MS.gene28443.t1 | MTR_5g089390 | 30.631 | 333 | 217 | 5 | 10 | 339 | 19 | 340 | 7.13e-53 | 178 |
| MS.gene28443.t1 | MTR_8g006120 | 35.780 | 327 | 198 | 5 | 6 | 328 | 11 | 329 | 9.07e-53 | 178 |
| MS.gene28443.t1 | MTR_5g034980 | 33.851 | 322 | 196 | 6 | 14 | 329 | 16 | 326 | 1.79e-52 | 177 |
| MS.gene28443.t1 | MTR_2g065550 | 30.973 | 339 | 215 | 4 | 6 | 339 | 11 | 335 | 1.86e-52 | 177 |
| MS.gene28443.t1 | MTR_1g030400 | 33.233 | 331 | 213 | 5 | 14 | 340 | 16 | 342 | 1.96e-52 | 177 |
| MS.gene28443.t1 | MTR_5g034910 | 34.579 | 321 | 203 | 4 | 10 | 329 | 12 | 326 | 2.21e-52 | 177 |
| MS.gene28443.t1 | MTR_5g034930 | 33.133 | 332 | 209 | 5 | 9 | 336 | 10 | 332 | 2.48e-52 | 177 |
| MS.gene28443.t1 | MTR_3g112480 | 32.616 | 279 | 180 | 1 | 59 | 329 | 19 | 297 | 5.39e-52 | 176 |
| MS.gene28443.t1 | MTR_1g038560 | 31.845 | 336 | 221 | 3 | 5 | 339 | 3 | 331 | 6.26e-52 | 175 |
| MS.gene28443.t1 | MTR_6g007743 | 33.621 | 348 | 208 | 8 | 6 | 347 | 13 | 343 | 1.24e-51 | 175 |
| MS.gene28443.t1 | MTR_2g102340 | 32.344 | 337 | 214 | 4 | 9 | 338 | 16 | 345 | 1.79e-51 | 175 |
| MS.gene28443.t1 | MTR_4g094352 | 34.118 | 340 | 207 | 4 | 6 | 335 | 13 | 345 | 3.85e-51 | 174 |
| MS.gene28443.t1 | MTR_1g114210 | 30.838 | 334 | 225 | 2 | 5 | 338 | 11 | 338 | 8.69e-50 | 170 |
| MS.gene28443.t1 | MTR_3g072500 | 35.391 | 243 | 152 | 2 | 94 | 336 | 6 | 243 | 1.63e-48 | 165 |
| MS.gene28443.t1 | MTR_4g094340 | 35.496 | 262 | 162 | 4 | 87 | 347 | 25 | 280 | 2.43e-48 | 164 |
| MS.gene28443.t1 | MTR_6g007750 | 31.686 | 344 | 222 | 4 | 6 | 346 | 13 | 346 | 1.47e-46 | 162 |
| MS.gene28443.t1 | MTR_3g072500 | 30.980 | 255 | 173 | 1 | 1 | 255 | 16 | 267 | 8.30e-46 | 157 |
| MS.gene28443.t1 | MTR_6g007747 | 32.164 | 342 | 218 | 5 | 6 | 346 | 13 | 341 | 1.18e-44 | 157 |
| MS.gene28443.t1 | MTR_4g094360 | 32.343 | 303 | 201 | 2 | 5 | 306 | 14 | 313 | 1.90e-44 | 155 |
| MS.gene28443.t1 | MTR_6g007740 | 31.884 | 345 | 218 | 6 | 6 | 347 | 13 | 343 | 7.59e-44 | 157 |
| MS.gene28443.t1 | MTR_6g007757 | 31.714 | 350 | 222 | 4 | 6 | 347 | 13 | 353 | 2.94e-43 | 153 |
| MS.gene28443.t1 | MTR_4g129650 | 34.694 | 245 | 146 | 4 | 103 | 341 | 2 | 238 | 3.73e-43 | 150 |
| MS.gene28443.t1 | MTR_5g034970 | 33.129 | 326 | 190 | 7 | 14 | 334 | 16 | 318 | 2.64e-42 | 150 |
| MS.gene28443.t1 | MTR_0103s0090 | 30.488 | 328 | 216 | 6 | 6 | 330 | 12 | 330 | 6.73e-42 | 150 |
| MS.gene28443.t1 | MTR_8g006090 | 34.106 | 302 | 193 | 3 | 6 | 306 | 12 | 308 | 1.62e-41 | 147 |
| MS.gene28443.t1 | MTR_8g006090 | 35.401 | 274 | 162 | 4 | 76 | 339 | 3 | 271 | 2.57e-41 | 146 |
| MS.gene28443.t1 | MTR_3g093450 | 43.590 | 195 | 56 | 4 | 142 | 327 | 29 | 178 | 1.05e-40 | 142 |
| MS.gene28443.t1 | MTR_1g074160 | 32.472 | 271 | 161 | 5 | 1 | 266 | 9 | 262 | 1.20e-40 | 144 |
| MS.gene28443.t1 | MTR_5g021160 | 31.970 | 269 | 164 | 4 | 87 | 346 | 6 | 264 | 1.23e-40 | 144 |
| MS.gene28443.t1 | MTR_4g094360 | 33.818 | 275 | 173 | 5 | 57 | 328 | 20 | 288 | 2.62e-40 | 145 |
| MS.gene28443.t1 | MTR_1g014510 | 28.696 | 345 | 238 | 6 | 6 | 348 | 12 | 350 | 9.06e-40 | 146 |
| MS.gene28443.t1 | MTR_3g072530 | 31.615 | 291 | 158 | 5 | 1 | 255 | 10 | 295 | 1.52e-39 | 142 |
| MS.gene28443.t1 | MTR_8g006050 | 29.769 | 346 | 193 | 8 | 6 | 341 | 12 | 317 | 7.96e-39 | 141 |
| MS.gene28443.t1 | MTR_3g112480 | 31.556 | 225 | 146 | 1 | 113 | 329 | 1 | 225 | 9.79e-39 | 139 |
| MS.gene28443.t1 | MTR_6g007753 | 30.462 | 325 | 208 | 6 | 28 | 346 | 315 | 627 | 7.34e-38 | 143 |
| MS.gene28443.t1 | MTR_6g007753 | 27.848 | 237 | 161 | 2 | 110 | 346 | 77 | 303 | 2.44e-24 | 104 |
| MS.gene28443.t1 | MTR_5g025370 | 28.358 | 335 | 227 | 3 | 7 | 329 | 12 | 345 | 6.30e-37 | 137 |
| MS.gene28443.t1 | MTR_5g025400 | 27.761 | 335 | 229 | 3 | 7 | 329 | 13 | 346 | 2.99e-36 | 135 |
| MS.gene28443.t1 | MTR_5g025290 | 27.976 | 336 | 225 | 3 | 7 | 329 | 13 | 344 | 3.51e-36 | 135 |
| MS.gene28443.t1 | MTR_5g025290 | 27.976 | 336 | 225 | 3 | 7 | 329 | 41 | 372 | 4.74e-36 | 135 |
| MS.gene28443.t1 | MTR_5g025340 | 28.152 | 341 | 218 | 5 | 7 | 329 | 12 | 343 | 6.01e-36 | 134 |
| MS.gene28443.t1 | MTR_8g072350 | 28.070 | 342 | 235 | 3 | 10 | 341 | 14 | 354 | 9.91e-35 | 131 |
| MS.gene28443.t1 | MTR_6g007760 | 27.541 | 305 | 212 | 5 | 6 | 308 | 12 | 309 | 3.16e-34 | 128 |
| MS.gene28443.t1 | MTR_5g025330 | 27.027 | 333 | 232 | 3 | 7 | 329 | 11 | 342 | 7.06e-34 | 131 |
| MS.gene28443.t1 | MTR_1g052205 | 34.874 | 238 | 132 | 6 | 108 | 338 | 3 | 224 | 1.61e-33 | 124 |
| MS.gene28443.t1 | MTR_5g021160 | 30.035 | 283 | 173 | 7 | 2 | 271 | 4 | 274 | 4.77e-33 | 124 |
| MS.gene28443.t1 | MTR_4g094340 | 33.852 | 257 | 155 | 6 | 5 | 255 | 9 | 256 | 1.74e-32 | 122 |
| MS.gene28443.t1 | MTR_4g094340 | 33.852 | 257 | 155 | 6 | 5 | 255 | 27 | 274 | 1.82e-32 | 122 |
| MS.gene28443.t1 | MTR_0103s0090 | 29.114 | 237 | 162 | 2 | 94 | 330 | 9 | 239 | 5.26e-32 | 121 |
| MS.gene28443.t1 | MTR_5g034980 | 33.468 | 248 | 148 | 6 | 14 | 255 | 16 | 252 | 9.55e-32 | 121 |
| MS.gene28443.t1 | MTR_1g051120 | 31.553 | 206 | 136 | 1 | 2 | 207 | 13 | 213 | 1.71e-31 | 118 |
| MS.gene28443.t1 | MTR_6g007757 | 32.271 | 251 | 159 | 3 | 6 | 254 | 13 | 254 | 4.07e-31 | 119 |
| MS.gene28443.t1 | MTR_1g051120 | 31.683 | 202 | 133 | 1 | 2 | 203 | 13 | 209 | 7.56e-31 | 118 |
| MS.gene28443.t1 | MTR_3g072500 | 29.126 | 206 | 143 | 1 | 1 | 206 | 16 | 218 | 1.56e-30 | 115 |
| MS.gene28443.t1 | MTR_4g100840 | 28.446 | 341 | 216 | 9 | 13 | 339 | 22 | 348 | 9.50e-30 | 117 |
| MS.gene28443.t1 | MTR_2g102340 | 29.514 | 288 | 189 | 4 | 9 | 289 | 42 | 322 | 2.18e-29 | 115 |
| MS.gene28443.t1 | MTR_8g006090 | 32.500 | 240 | 156 | 3 | 6 | 244 | 12 | 246 | 2.07e-26 | 107 |
| MS.gene28443.t1 | MTR_1g068720 | 36.641 | 131 | 80 | 3 | 207 | 334 | 99 | 229 | 4.06e-19 | 85.5 |
| MS.gene28443.t1 | MTR_1g068720 | 35.897 | 78 | 50 | 0 | 3 | 80 | 12 | 89 | 5.91e-12 | 65.1 |
| MS.gene28443.t1 | MTR_4g094342 | 26.733 | 202 | 148 | 0 | 5 | 206 | 13 | 214 | 6.17e-19 | 85.5 |
| MS.gene28443.t1 | MTR_4g094340 | 33.171 | 205 | 122 | 6 | 5 | 203 | 27 | 222 | 1.38e-18 | 84.0 |
| MS.gene28443.t1 | MTR_5g012650 | 26.543 | 324 | 219 | 8 | 13 | 328 | 16 | 328 | 3.28e-18 | 84.7 |
| MS.gene28443.t1 | MTR_8g076800 | 36.538 | 104 | 65 | 1 | 181 | 284 | 147 | 249 | 1.41e-16 | 79.0 |
| MS.gene28443.t1 | MTR_6g007470 | 39.080 | 87 | 53 | 0 | 197 | 283 | 102 | 188 | 1.32e-15 | 75.5 |
| MS.gene28443.t1 | MTR_8g006090 | 31.953 | 169 | 110 | 2 | 76 | 244 | 3 | 166 | 5.94e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28443.t1 | AT5G64700 | 60.571 | 350 | 131 | 5 | 1 | 347 | 3 | 348 | 2.17e-130 | 377 |
| MS.gene28443.t1 | AT5G64700 | 60.232 | 259 | 99 | 3 | 1 | 256 | 3 | 260 | 1.38e-95 | 285 |
| MS.gene28443.t1 | AT1G43650 | 47.416 | 329 | 165 | 1 | 1 | 329 | 2 | 322 | 1.34e-87 | 267 |
| MS.gene28443.t1 | AT1G44800 | 35.542 | 332 | 205 | 2 | 1 | 330 | 6 | 330 | 3.52e-74 | 234 |
| MS.gene28443.t1 | AT1G21890 | 36.494 | 348 | 213 | 4 | 1 | 343 | 6 | 350 | 7.47e-72 | 228 |
| MS.gene28443.t1 | AT4G08300 | 32.754 | 345 | 226 | 2 | 1 | 345 | 6 | 344 | 6.59e-71 | 226 |
| MS.gene28443.t1 | AT5G07050 | 33.903 | 351 | 225 | 3 | 1 | 348 | 13 | 359 | 2.47e-68 | 220 |
| MS.gene28443.t1 | AT4G08290 | 35.549 | 346 | 217 | 3 | 1 | 345 | 8 | 348 | 2.67e-66 | 214 |
| MS.gene28443.t1 | AT1G75500 | 34.969 | 326 | 208 | 2 | 7 | 329 | 21 | 345 | 4.08e-66 | 214 |
| MS.gene28443.t1 | AT1G75500 | 34.969 | 326 | 208 | 2 | 7 | 329 | 21 | 345 | 4.08e-66 | 214 |
| MS.gene28443.t1 | AT2G39510 | 34.203 | 345 | 221 | 2 | 1 | 344 | 3 | 342 | 2.16e-63 | 206 |
| MS.gene28443.t1 | AT1G21890 | 36.943 | 314 | 192 | 3 | 1 | 309 | 6 | 318 | 4.29e-63 | 204 |
| MS.gene28443.t1 | AT4G30420 | 32.754 | 345 | 223 | 3 | 1 | 341 | 4 | 343 | 1.31e-61 | 202 |
| MS.gene28443.t1 | AT2G37460 | 32.958 | 355 | 223 | 5 | 1 | 348 | 10 | 356 | 1.59e-61 | 201 |
| MS.gene28443.t1 | AT1G09380 | 34.877 | 324 | 204 | 2 | 6 | 326 | 8 | 327 | 2.77e-61 | 201 |
| MS.gene28443.t1 | AT4G30420 | 33.136 | 338 | 217 | 3 | 8 | 341 | 1 | 333 | 1.16e-60 | 199 |
| MS.gene28443.t1 | AT3G18200 | 34.835 | 333 | 205 | 3 | 10 | 338 | 39 | 363 | 1.21e-58 | 194 |
| MS.gene28443.t1 | AT4G28040 | 33.431 | 341 | 206 | 6 | 1 | 338 | 3 | 325 | 5.71e-58 | 192 |
| MS.gene28443.t1 | AT4G28040 | 33.431 | 341 | 206 | 6 | 1 | 338 | 3 | 325 | 5.71e-58 | 192 |
| MS.gene28443.t1 | AT4G28040 | 33.431 | 341 | 206 | 6 | 1 | 338 | 3 | 325 | 5.71e-58 | 192 |
| MS.gene28443.t1 | AT4G28040 | 33.431 | 341 | 206 | 6 | 1 | 338 | 3 | 325 | 5.71e-58 | 192 |
| MS.gene28443.t1 | AT4G28040 | 33.431 | 341 | 206 | 6 | 1 | 338 | 3 | 325 | 5.71e-58 | 192 |
| MS.gene28443.t1 | AT1G25270 | 35.294 | 340 | 213 | 3 | 10 | 348 | 7 | 340 | 5.78e-58 | 191 |
| MS.gene28443.t1 | AT1G43650 | 44.141 | 256 | 135 | 1 | 1 | 256 | 2 | 249 | 1.04e-56 | 186 |
| MS.gene28443.t1 | AT2G40900 | 30.347 | 346 | 228 | 2 | 5 | 347 | 10 | 345 | 3.60e-56 | 188 |
| MS.gene28443.t1 | AT5G13670 | 29.888 | 358 | 236 | 5 | 2 | 348 | 4 | 357 | 1.95e-53 | 180 |
| MS.gene28443.t1 | AT1G68170 | 34.365 | 323 | 202 | 4 | 10 | 328 | 7 | 323 | 7.61e-53 | 178 |
| MS.gene28443.t1 | AT1G68170 | 34.365 | 323 | 202 | 4 | 10 | 328 | 17 | 333 | 9.55e-53 | 178 |
| MS.gene28443.t1 | AT4G01440 | 32.416 | 327 | 208 | 2 | 5 | 327 | 9 | 326 | 1.50e-52 | 177 |
| MS.gene28443.t1 | AT3G56620 | 32.308 | 325 | 205 | 3 | 5 | 326 | 10 | 322 | 2.22e-52 | 177 |
| MS.gene28443.t1 | AT3G53210 | 30.793 | 328 | 223 | 1 | 2 | 329 | 6 | 329 | 9.96e-52 | 176 |
| MS.gene28443.t1 | AT3G30340 | 32.609 | 322 | 209 | 3 | 25 | 342 | 30 | 347 | 1.24e-51 | 175 |
| MS.gene28443.t1 | AT2G37450 | 31.161 | 353 | 210 | 6 | 1 | 348 | 4 | 328 | 1.46e-50 | 172 |
| MS.gene28443.t1 | AT5G40240 | 32.647 | 340 | 223 | 4 | 6 | 343 | 20 | 355 | 1.05e-49 | 170 |
| MS.gene28443.t1 | AT5G40240 | 32.647 | 340 | 223 | 4 | 6 | 343 | 20 | 355 | 1.05e-49 | 170 |
| MS.gene28443.t1 | AT5G40240 | 32.647 | 340 | 223 | 4 | 6 | 343 | 34 | 369 | 1.94e-49 | 170 |
| MS.gene28443.t1 | AT1G11450 | 30.814 | 344 | 227 | 4 | 6 | 348 | 16 | 349 | 3.19e-48 | 166 |
| MS.gene28443.t1 | AT1G01070 | 31.915 | 329 | 219 | 3 | 1 | 328 | 11 | 335 | 8.72e-48 | 165 |
| MS.gene28443.t1 | AT5G40230 | 32.267 | 344 | 227 | 4 | 6 | 347 | 21 | 360 | 9.29e-48 | 165 |
| MS.gene28443.t1 | AT4G01440 | 32.343 | 303 | 191 | 3 | 5 | 302 | 9 | 302 | 1.00e-46 | 161 |
| MS.gene28443.t1 | AT4G01430 | 31.304 | 345 | 231 | 6 | 6 | 348 | 9 | 349 | 6.79e-46 | 160 |
| MS.gene28443.t1 | AT4G15540 | 32.286 | 350 | 217 | 5 | 2 | 348 | 12 | 344 | 2.06e-45 | 159 |
| MS.gene28443.t1 | AT4G15540 | 32.286 | 350 | 217 | 5 | 2 | 348 | 12 | 344 | 2.06e-45 | 159 |
| MS.gene28443.t1 | AT1G11460 | 31.173 | 324 | 217 | 3 | 6 | 328 | 16 | 334 | 3.04e-45 | 158 |
| MS.gene28443.t1 | AT4G08290 | 35.409 | 257 | 161 | 2 | 1 | 256 | 8 | 260 | 5.66e-44 | 153 |
| MS.gene28443.t1 | AT1G11450 | 30.968 | 310 | 203 | 4 | 40 | 348 | 6 | 305 | 3.21e-43 | 152 |
| MS.gene28443.t1 | AT1G11450 | 30.820 | 305 | 200 | 4 | 45 | 348 | 4 | 298 | 2.27e-41 | 147 |
| MS.gene28443.t1 | AT5G40210 | 30.240 | 334 | 202 | 8 | 10 | 340 | 17 | 322 | 4.30e-39 | 142 |
| MS.gene28443.t1 | AT3G28050 | 30.887 | 327 | 210 | 6 | 6 | 328 | 12 | 326 | 3.48e-38 | 140 |
| MS.gene28443.t1 | AT2G37450 | 33.462 | 260 | 161 | 4 | 94 | 348 | 4 | 256 | 4.62e-38 | 137 |
| MS.gene28443.t1 | AT3G53210 | 31.600 | 250 | 167 | 1 | 80 | 329 | 27 | 272 | 6.35e-38 | 138 |
| MS.gene28443.t1 | AT3G18200 | 35.146 | 239 | 143 | 3 | 104 | 338 | 3 | 233 | 1.04e-37 | 135 |
| MS.gene28443.t1 | AT1G01070 | 31.915 | 282 | 187 | 3 | 48 | 328 | 11 | 288 | 1.59e-37 | 137 |
| MS.gene28443.t1 | AT4G01430 | 30.693 | 303 | 205 | 5 | 6 | 306 | 9 | 308 | 1.64e-37 | 137 |
| MS.gene28443.t1 | AT1G11450 | 29.801 | 302 | 205 | 3 | 6 | 306 | 16 | 311 | 2.40e-37 | 136 |
| MS.gene28443.t1 | AT1G11450 | 31.939 | 263 | 168 | 4 | 87 | 348 | 5 | 257 | 7.78e-37 | 134 |
| MS.gene28443.t1 | AT4G01440 | 31.373 | 255 | 162 | 2 | 5 | 255 | 9 | 254 | 1.59e-36 | 133 |
| MS.gene28443.t1 | AT3G53210 | 30.315 | 254 | 173 | 1 | 2 | 255 | 6 | 255 | 2.42e-36 | 132 |
| MS.gene28443.t1 | AT3G28130 | 30.395 | 329 | 222 | 5 | 20 | 346 | 27 | 350 | 5.85e-36 | 134 |
| MS.gene28443.t1 | AT5G45370 | 29.538 | 325 | 214 | 4 | 10 | 334 | 24 | 333 | 8.82e-36 | 133 |
| MS.gene28443.t1 | AT3G28100 | 30.351 | 313 | 211 | 6 | 19 | 329 | 27 | 334 | 3.16e-35 | 132 |
| MS.gene28443.t1 | AT3G30340 | 33.333 | 243 | 155 | 3 | 25 | 267 | 30 | 265 | 5.20e-35 | 129 |
| MS.gene28443.t1 | AT4G01440 | 32.889 | 225 | 138 | 2 | 107 | 327 | 3 | 218 | 8.03e-35 | 128 |
| MS.gene28443.t1 | AT4G01440 | 32.889 | 225 | 138 | 2 | 107 | 327 | 3 | 218 | 8.03e-35 | 128 |
| MS.gene28443.t1 | AT3G45870 | 29.846 | 325 | 217 | 4 | 7 | 323 | 13 | 334 | 8.18e-35 | 131 |
| MS.gene28443.t1 | AT3G28070 | 31.250 | 256 | 171 | 4 | 94 | 348 | 13 | 264 | 8.67e-35 | 128 |
| MS.gene28443.t1 | AT3G28080 | 31.013 | 316 | 211 | 6 | 19 | 332 | 27 | 337 | 1.08e-34 | 130 |
| MS.gene28443.t1 | AT3G28070 | 30.714 | 280 | 188 | 5 | 70 | 348 | 82 | 356 | 4.86e-34 | 129 |
| MS.gene28443.t1 | AT5G45370 | 26.866 | 335 | 234 | 3 | 10 | 334 | 24 | 357 | 4.24e-33 | 127 |
| MS.gene28443.t1 | AT5G45370 | 26.866 | 335 | 234 | 3 | 10 | 334 | 24 | 357 | 4.24e-33 | 127 |
| MS.gene28443.t1 | AT3G28080 | 31.301 | 246 | 164 | 4 | 88 | 332 | 7 | 248 | 5.78e-33 | 124 |
| MS.gene28443.t1 | AT3G28080 | 31.301 | 246 | 164 | 4 | 88 | 332 | 7 | 248 | 5.78e-33 | 124 |
| MS.gene28443.t1 | AT3G28080 | 31.301 | 246 | 164 | 4 | 88 | 332 | 7 | 248 | 5.78e-33 | 124 |
| MS.gene28443.t1 | AT3G28080 | 31.301 | 246 | 164 | 4 | 88 | 332 | 7 | 248 | 5.78e-33 | 124 |
| MS.gene28443.t1 | AT3G28130 | 31.102 | 254 | 170 | 3 | 94 | 346 | 15 | 264 | 1.16e-32 | 123 |
| MS.gene28443.t1 | AT3G28130 | 31.102 | 254 | 170 | 3 | 94 | 346 | 15 | 264 | 1.16e-32 | 123 |
| MS.gene28443.t1 | AT4G01450 | 32.198 | 323 | 207 | 5 | 8 | 328 | 11 | 323 | 1.51e-32 | 125 |
| MS.gene28443.t1 | AT3G28080 | 31.301 | 246 | 164 | 4 | 88 | 332 | 88 | 329 | 4.16e-32 | 123 |
| MS.gene28443.t1 | AT4G01450 | 30.741 | 270 | 177 | 4 | 8 | 276 | 11 | 271 | 1.25e-31 | 122 |
| MS.gene28443.t1 | AT4G19185 | 28.788 | 330 | 218 | 5 | 13 | 329 | 28 | 353 | 2.22e-30 | 119 |
| MS.gene28443.t1 | AT2G37450 | 30.508 | 236 | 152 | 4 | 118 | 348 | 61 | 289 | 2.18e-28 | 112 |
| MS.gene28443.t1 | AT1G70260 | 24.370 | 357 | 257 | 6 | 1 | 348 | 5 | 357 | 2.91e-28 | 113 |
| MS.gene28443.t1 | AT4G01450 | 31.048 | 248 | 161 | 3 | 8 | 254 | 11 | 249 | 3.28e-28 | 110 |
| MS.gene28443.t1 | AT3G45870 | 28.571 | 308 | 209 | 4 | 7 | 306 | 13 | 317 | 1.03e-27 | 111 |
| MS.gene28443.t1 | AT5G47470 | 29.938 | 324 | 209 | 5 | 10 | 328 | 62 | 372 | 1.53e-27 | 112 |
| MS.gene28443.t1 | AT5G47470 | 29.938 | 324 | 209 | 5 | 10 | 328 | 62 | 372 | 1.76e-27 | 111 |
| MS.gene28443.t1 | AT5G47470 | 29.938 | 324 | 209 | 5 | 10 | 328 | 34 | 344 | 2.01e-27 | 110 |
| MS.gene28443.t1 | AT3G28070 | 29.004 | 231 | 159 | 4 | 119 | 348 | 1 | 227 | 9.90e-26 | 103 |
| MS.gene28443.t1 | AT3G28070 | 30.252 | 238 | 160 | 5 | 70 | 306 | 82 | 314 | 5.43e-25 | 103 |
| MS.gene28443.t1 | AT4G01450 | 33.659 | 205 | 126 | 3 | 8 | 211 | 11 | 206 | 9.48e-25 | 101 |
| MS.gene28443.t1 | AT4G19185 | 29.134 | 254 | 163 | 5 | 89 | 329 | 26 | 275 | 5.94e-24 | 100 |
| MS.gene28443.t1 | AT1G60050 | 21.490 | 349 | 267 | 5 | 6 | 348 | 13 | 360 | 9.46e-24 | 100 |
| MS.gene28443.t1 | AT3G28130 | 28.821 | 229 | 158 | 3 | 119 | 346 | 1 | 225 | 1.22e-23 | 97.8 |
| MS.gene28443.t1 | AT3G28080 | 29.302 | 215 | 147 | 4 | 119 | 332 | 1 | 211 | 2.63e-23 | 97.1 |
| MS.gene28443.t1 | AT4G01430 | 28.571 | 217 | 149 | 5 | 135 | 348 | 2 | 215 | 2.35e-21 | 91.7 |
| MS.gene28443.t1 | AT5G45370 | 25.896 | 251 | 175 | 3 | 94 | 334 | 6 | 255 | 2.84e-20 | 89.7 |
| MS.gene28443.t1 | AT5G45370 | 25.896 | 251 | 175 | 3 | 94 | 334 | 6 | 255 | 2.84e-20 | 89.7 |
| MS.gene28443.t1 | AT4G16620 | 24.779 | 339 | 236 | 5 | 14 | 348 | 20 | 343 | 6.07e-20 | 90.1 |
| MS.gene28443.t1 | AT3G45870 | 28.972 | 214 | 141 | 4 | 118 | 323 | 49 | 259 | 1.38e-19 | 88.2 |
| MS.gene28443.t1 | AT3G28080 | 26.531 | 245 | 123 | 4 | 88 | 332 | 7 | 194 | 1.21e-18 | 84.0 |
| MS.gene28443.t1 | AT3G45870 | 27.642 | 246 | 168 | 3 | 7 | 244 | 13 | 256 | 1.70e-18 | 84.7 |
| MS.gene28443.t1 | AT3G28080 | 27.619 | 315 | 169 | 9 | 19 | 332 | 27 | 283 | 8.39e-17 | 80.1 |
| MS.gene28443.t1 | AT3G28100 | 28.571 | 238 | 164 | 5 | 19 | 254 | 27 | 260 | 1.06e-16 | 79.3 |
| MS.gene28443.t1 | AT4G24980 | 24.839 | 310 | 162 | 7 | 20 | 329 | 1 | 239 | 4.13e-16 | 77.8 |
| MS.gene28443.t1 | AT3G28130 | 28.870 | 239 | 162 | 5 | 19 | 254 | 26 | 259 | 5.74e-16 | 77.4 |
| MS.gene28443.t1 | AT3G45870 | 28.962 | 183 | 119 | 4 | 146 | 323 | 7 | 183 | 2.70e-15 | 74.7 |
| MS.gene28443.t1 | AT5G45370 | 24.268 | 239 | 167 | 4 | 106 | 334 | 63 | 297 | 8.57e-15 | 74.7 |
| MS.gene28443.t1 | AT4G16620 | 24.710 | 259 | 177 | 4 | 93 | 348 | 3 | 246 | 1.99e-14 | 72.8 |
| MS.gene28443.t1 | AT4G16620 | 24.710 | 259 | 177 | 4 | 93 | 348 | 3 | 246 | 1.99e-14 | 72.8 |
| MS.gene28443.t1 | AT3G45870 | 26.904 | 197 | 133 | 4 | 118 | 306 | 49 | 242 | 6.21e-13 | 68.2 |
| MS.gene28443.t1 | AT3G45870 | 26.904 | 197 | 133 | 4 | 118 | 306 | 49 | 242 | 6.21e-13 | 68.2 |
| MS.gene28443.t1 | AT3G28100 | 28.319 | 226 | 153 | 6 | 19 | 243 | 27 | 244 | 4.15e-12 | 65.9 |
| MS.gene28443.t1 | AT3G28130 | 31.551 | 187 | 121 | 4 | 19 | 203 | 26 | 207 | 1.23e-11 | 63.9 |
Find 81 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTCTTTCCAACACCTTT+TGG | 0.154354 | 4.4:+8618463 | MS.gene28443:CDS |
| CCCAGTTATTACCTTCTTCT+TGG | 0.160877 | 4.4:+8615284 | MS.gene28443:CDS |
| AGACTTTGAACAATGGAAAT+TGG | 0.177781 | 4.4:+8618722 | MS.gene28443:CDS |
| GGTAGCTGCGGTTTGGTTCT+AGG | 0.194497 | 4.4:+8619198 | MS.gene28443:CDS |
| GAAAAGAAACAATCCATATT+TGG | 0.226314 | 4.4:+8614632 | MS.gene28443:CDS |
| ACGATTACCACAACCAAATA+TGG | 0.236080 | 4.4:-8614645 | None:intergenic |
| ATCTTCTTCATTTCTTTCAT+TGG | 0.268647 | 4.4:+8614932 | MS.gene28443:CDS |
| GGCTGGTGTTGTGGCATGTT+TGG | 0.270053 | 4.4:+8618296 | MS.gene28443:CDS |
| TCTATGTCTACGGAAGATTT+TGG | 0.273158 | 4.4:-8619261 | None:intergenic |
| CCTTGGCGAGATACTAAGTT+TGG | 0.289137 | 4.4:+8619047 | MS.gene28443:CDS |
| GCTGGTGTTGTGGCATGTTT+GGG | 0.298366 | 4.4:+8618297 | MS.gene28443:CDS |
| AGAAGAGAGCAAAAGGTATT+AGG | 0.301410 | 4.4:-8614773 | None:intergenic |
| AAGAAACATACCAGCATATA+TGG | 0.327174 | 4.4:-8614673 | None:intergenic |
| AATAAACACTTCTGCAACTT+TGG | 0.328137 | 4.4:+8615239 | MS.gene28443:CDS |
| CCAAACCGCAGCTACCTAAA+AGG | 0.332404 | 4.4:-8619191 | None:intergenic |
| GATCAGGATCACATCGAGTT+TGG | 0.352283 | 4.4:+8615197 | MS.gene28443:intron |
| CATCAGGGCCATGTTCTATC+TGG | 0.358536 | 4.4:+8618411 | MS.gene28443:CDS |
| GCCAAGAAGAAGGTAATAAC+TGG | 0.369739 | 4.4:-8615285 | None:intergenic |
| TCTTCTTCATTTCTTTCATT+GGG | 0.372911 | 4.4:+8614933 | MS.gene28443:CDS |
| GACTTTGAACAATGGAAATT+GGG | 0.382671 | 4.4:+8618723 | MS.gene28443:CDS |
| ACATCGAGTTTGGACATATA+TGG | 0.383218 | 4.4:+8615207 | MS.gene28443:CDS |
| CCATAAAACCCAACAACATC+AGG | 0.387799 | 4.4:+8618395 | MS.gene28443:CDS |
| TTGAGAGTAAAGACAGCTGC+TGG | 0.416559 | 4.4:+8618261 | MS.gene28443:CDS |
| AGCTGCTGGGGCAGCTAAGT+TGG | 0.418935 | 4.4:+8618275 | MS.gene28443:CDS |
| GTTGTGAGTAGCAGCTTTGA+AGG | 0.433960 | 4.4:-8618642 | None:intergenic |
| TAAAGACTGAATTGAGCTTA+AGG | 0.444400 | 4.4:-8618676 | None:intergenic |
| TTGAACAATGGAAATTGGGT+TGG | 0.447756 | 4.4:+8618727 | MS.gene28443:CDS |
| GCTGGGGCAGCTAAGTTGGC+TGG | 0.449504 | 4.4:+8618279 | MS.gene28443:CDS |
| CTTGGCGAGATACTAAGTTT+GGG | 0.463919 | 4.4:+8619048 | MS.gene28443:CDS |
| ATCTGGATCATCATGGATCA+AGG | 0.464622 | 4.4:+8618428 | MS.gene28443:CDS |
| ATAGTCATGATCAGAGCTAA+TGG | 0.474306 | 4.4:-8619006 | None:intergenic |
| TCAGTCTTTAGTCGTAGCCT+TGG | 0.475077 | 4.4:+8618689 | MS.gene28443:CDS |
| TCTTCTTGGCACTCATACTC+AGG | 0.479631 | 4.4:+8615298 | MS.gene28443:CDS |
| AACATGGCCCTGATGTTGTT+GGG | 0.482448 | 4.4:-8618403 | None:intergenic |
| AGCTAAGTTGGCTGGTGTTG+TGG | 0.482765 | 4.4:+8618287 | MS.gene28443:CDS |
| AGGACTGTACTTTGTGCTGT+GGG | 0.485869 | 4.4:+8619218 | MS.gene28443:CDS |
| GGTGTTGTGGCATGTTTGGG+TGG | 0.487641 | 4.4:+8618300 | MS.gene28443:CDS |
| TTCTCCTCAGCAATTCTCCT+TGG | 0.488362 | 4.4:+8619030 | MS.gene28443:CDS |
| CATTCAAAGAAGAGAGCAAA+AGG | 0.495775 | 4.4:-8614780 | None:intergenic |
| AAACAATCCATATTTGGTTG+TGG | 0.502792 | 4.4:+8614638 | MS.gene28443:CDS |
| TACAAGCCACATTCCCCAAA+AGG | 0.506360 | 4.4:-8618478 | None:intergenic |
| GAACATGGCCCTGATGTTGT+TGG | 0.509980 | 4.4:-8618404 | None:intergenic |
| ATCTTGCAAAACGTGGTGAA+TGG | 0.517416 | 4.4:-8614911 | None:intergenic |
| AACATGGGTTATAGAGAAGA+GGG | 0.525256 | 4.4:+8618957 | MS.gene28443:CDS |
| ATTGTGATGATAGGGAATAA+TGG | 0.533329 | 4.4:+8618909 | MS.gene28443:intron |
| ATCGTACAAGCCATATATGC+TGG | 0.535945 | 4.4:+8614663 | MS.gene28443:CDS |
| CCACATTCCCCAAAAGGTGT+TGG | 0.537006 | 4.4:-8618472 | None:intergenic |
| TAGGACTGTACTTTGTGCTG+TGG | 0.545283 | 4.4:+8619217 | MS.gene28443:CDS |
| TGACATATTACTTACAAACA+TGG | 0.547093 | 4.4:+8618941 | MS.gene28443:CDS |
| GAGTATGAGTGCCAAGAAGA+AGG | 0.556534 | 4.4:-8615295 | None:intergenic |
| GAGACAGTTAGCAGTGGCAG+CGG | 0.560434 | 4.4:-8615262 | None:intergenic |
| AAAGTCTCTTTCTACAGCCA+AGG | 0.560491 | 4.4:-8618706 | None:intergenic |
| TGAGAGTAAAGACAGCTGCT+GGG | 0.564467 | 4.4:+8618262 | MS.gene28443:CDS |
| ATGTTCTATCTGGATCATCA+TGG | 0.568803 | 4.4:+8618421 | MS.gene28443:CDS |
| TGATAGGGAATAATGGTGAC+TGG | 0.576068 | 4.4:+8618916 | MS.gene28443:intron |
| GGAAGCTTGCTCTATGTCTA+CGG | 0.581096 | 4.4:-8619271 | None:intergenic |
| TTGTGAGTAGCAGCTTTGAA+GGG | 0.587464 | 4.4:-8618641 | None:intergenic |
| TGGGACAAAAGTTCTAATTG+AGG | 0.588883 | 4.4:-8618351 | None:intergenic |
| AAACATGGGTTATAGAGAAG+AGG | 0.594424 | 4.4:+8618956 | MS.gene28443:CDS |
| TCTGGATCATCATGGATCAA+GGG | 0.597500 | 4.4:+8618429 | MS.gene28443:CDS |
| GCGAGATACTAAGTTTGGGA+AGG | 0.599753 | 4.4:+8619052 | MS.gene28443:CDS |
| AGACAAAATTGTTCATGCCA+TGG | 0.599804 | 4.4:-8614716 | None:intergenic |
| CCAAGAAGAAGGTAATAACT+GGG | 0.601333 | 4.4:-8615284 | None:intergenic |
| GAGAGTAAAGACAGCTGCTG+GGG | 0.601355 | 4.4:+8618263 | MS.gene28443:CDS |
| GACATATTACTTACAAACAT+GGG | 0.606817 | 4.4:+8618942 | MS.gene28443:CDS |
| CAGAGCTAATGGTGTTGACA+TGG | 0.621361 | 4.4:-8618995 | None:intergenic |
| TCAAAAGCTGCATTCGACCA+TGG | 0.622578 | 4.4:+8614699 | MS.gene28443:CDS |
| CAAAACGTGGTGAATGGCAG+AGG | 0.629632 | 4.4:-8614905 | None:intergenic |
| AACGTGGTGAATGGCAGAGG+TGG | 0.629773 | 4.4:-8614902 | None:intergenic |
| TAGAAAGAGACTTTGAACAA+TGG | 0.631493 | 4.4:+8618715 | MS.gene28443:CDS |
| CATAAAACCCAACAACATCA+GGG | 0.634156 | 4.4:+8618396 | MS.gene28443:CDS |
| AAAAGGTATTAGGAAAAGAG+TGG | 0.638100 | 4.4:-8614763 | None:intergenic |
| GTTGACATGGCTAGAAACAC+TGG | 0.640056 | 4.4:-8618982 | None:intergenic |
| CTCGCCAAGGAGAATTGCTG+AGG | 0.658676 | 4.4:-8619034 | None:intergenic |
| ATGATGATCCAGATAGAACA+TGG | 0.660750 | 4.4:-8618419 | None:intergenic |
| CCAAACTTAGTATCTCGCCA+AGG | 0.674774 | 4.4:-8619047 | None:intergenic |
| AACTGGGAGACAGTTAGCAG+TGG | 0.678387 | 4.4:-8615268 | None:intergenic |
| GAAGAAGATCTTGCAAAACG+TGG | 0.698513 | 4.4:-8614918 | None:intergenic |
| GGACTGTACTTTGTGCTGTG+GGG | 0.705488 | 4.4:+8619219 | MS.gene28443:CDS |
| AGGTGTTGGAAAGAAGCATG+AGG | 0.706938 | 4.4:-8618458 | None:intergenic |
| ACATGGGTTATAGAGAAGAG+GGG | 0.737247 | 4.4:+8618958 | MS.gene28443:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAACTTCAAAATTT+CGG | - | chr4.4:8615429-8615448 | None:intergenic | 10.0% |
| !! | AAAAAAATAATTAAAAACTC+AGG | + | chr4.4:8617360-8617379 | MS.gene28443:intron | 10.0% |
| !! | AAAAAATAATTAAAAACTCA+GGG | + | chr4.4:8617361-8617380 | MS.gene28443:intron | 10.0% |
| !! | ATATAATTTCAAGAAATTAA+GGG | + | chr4.4:8615513-8615532 | MS.gene28443:intron | 10.0% |
| !! | CATACATATATAAATTAAAA+TGG | - | chr4.4:8616090-8616109 | None:intergenic | 10.0% |
| !!! | AATTTGTTTATTTTACATAA+GGG | + | chr4.4:8615451-8615470 | MS.gene28443:intron | 10.0% |
| !!! | ACAAATTTTTGTTTATATTT+TGG | + | chr4.4:8617759-8617778 | MS.gene28443:intron | 10.0% |
| !!! | CAAATTTTTGTTTATATTTT+GGG | + | chr4.4:8617760-8617779 | MS.gene28443:intron | 10.0% |
| !!! | TAATTTGTTTATTTTACATA+AGG | + | chr4.4:8615450-8615469 | MS.gene28443:intron | 10.0% |
| !! | AAAGCTATATACTATAAATT+TGG | + | chr4.4:8614863-8614882 | MS.gene28443:intron | 15.0% |
| !! | AAATTATATGCAATGTTTAA+AGG | - | chr4.4:8615502-8615521 | None:intergenic | 15.0% |
| !! | AATATAGACCAAATATATTA+AGG | + | chr4.4:8616843-8616862 | MS.gene28443:intron | 15.0% |
| !! | AGTGATAGAAAAATTAAAAA+AGG | - | chr4.4:8615400-8615419 | None:intergenic | 15.0% |
| !! | ATATAAATTAAAATGGTATG+CGG | - | chr4.4:8616083-8616102 | None:intergenic | 15.0% |
| !! | ATATAATCTTTGTGTATATT+TGG | + | chr4.4:8618126-8618145 | MS.gene28443:intron | 15.0% |
| !! | ATATTGATATTACTATAAGT+TGG | - | chr4.4:8618550-8618569 | None:intergenic | 15.0% |
| !! | ATTGAATAATTGATATATCT+AGG | + | chr4.4:8616820-8616839 | MS.gene28443:intron | 15.0% |
| !! | CAATATCTTAATGAATTTAA+TGG | + | chr4.4:8615905-8615924 | MS.gene28443:intron | 15.0% |
| !! | CATATAATTTCAAGAAATTA+AGG | + | chr4.4:8615512-8615531 | MS.gene28443:intron | 15.0% |
| !! | CATTTAAACCTTAATATATT+TGG | - | chr4.4:8616854-8616873 | None:intergenic | 15.0% |
| !! | TAAAAAAAAACCAAAACTAA+CGG | + | chr4.4:8616933-8616952 | MS.gene28443:intron | 15.0% |
| !! | TCAACAAAAGTTAATATATT+TGG | - | chr4.4:8617740-8617759 | None:intergenic | 15.0% |
| !! | TGATTAATAAACAAGTTAAT+TGG | + | chr4.4:8618522-8618541 | MS.gene28443:intron | 15.0% |
| !!! | AATTTTTTTGTATGTATTTC+AGG | + | chr4.4:8618229-8618248 | MS.gene28443:intron | 15.0% |
| !!! | ATTAATTATGTGATTGTTTT+TGG | + | chr4.4:8619154-8619173 | MS.gene28443:intron | 15.0% |
| !!! | GTTTTGTTCATTAATTTTAT+TGG | - | chr4.4:8617315-8617334 | None:intergenic | 15.0% |
| !!! | TAAATGAACATTTAATTTGT+AGG | - | chr4.4:8616753-8616772 | None:intergenic | 15.0% |
| !!! | TATTTTAATAGTGTTTGTTT+AGG | - | chr4.4:8615768-8615787 | None:intergenic | 15.0% |
| !!! | TTTCAAAAAAGTGATTTTTA+TGG | - | chr4.4:8615632-8615651 | None:intergenic | 15.0% |
| !!! | TTTTTTATTACATTTTGGAA+CGG | - | chr4.4:8617677-8617696 | None:intergenic | 15.0% |
| !! | AAAATTCTCAATTAAACATG+TGG | - | chr4.4:8618215-8618234 | None:intergenic | 20.0% |
| !! | AACCAATATCTAATTTCAAA+AGG | - | chr4.4:8616478-8616497 | None:intergenic | 20.0% |
| !! | AACTAAATTATTGTGATGAT+AGG | + | chr4.4:8618900-8618919 | MS.gene28443:intron | 20.0% |
| !! | AAGTAAAATGTGCATAAATT+TGG | - | chr4.4:8616422-8616441 | None:intergenic | 20.0% |
| !! | AATTTATATTCTTGAGATAC+CGG | - | chr4.4:8616124-8616143 | None:intergenic | 20.0% |
| !! | ACCAATATCTAATTTCAAAA+GGG | - | chr4.4:8616477-8616496 | None:intergenic | 20.0% |
| !! | ACTAAATTATTGTGATGATA+GGG | + | chr4.4:8618901-8618920 | MS.gene28443:intron | 20.0% |
| !! | CAAAAAATGTTGAAAATGTA+GGG | - | chr4.4:8617036-8617055 | None:intergenic | 20.0% |
| !! | CGAATAAATTGAAGATTATT+AGG | - | chr4.4:8614815-8614834 | None:intergenic | 20.0% |
| !! | CTCTAAATTGAAAAACTATT+AGG | - | chr4.4:8615726-8615745 | None:intergenic | 20.0% |
| !! | GAAAAAAATATCTATCACTA+TGG | - | chr4.4:8615792-8615811 | None:intergenic | 20.0% |
| !! | GATAGAAAAATTAAAAAAGG+TGG | - | chr4.4:8615397-8615416 | None:intergenic | 20.0% |
| !! | TAAGAGAGAAAATAATTAAG+TGG | - | chr4.4:8616228-8616247 | None:intergenic | 20.0% |
| !! | TAATCAAAGGGAAATTAATA+TGG | - | chr4.4:8614840-8614859 | None:intergenic | 20.0% |
| !! | TACATTGTGTATAACAATTA+TGG | - | chr4.4:8615839-8615858 | None:intergenic | 20.0% |
| !! | TCAAAAAATGTTGAAAATGT+AGG | - | chr4.4:8617037-8617056 | None:intergenic | 20.0% |
| !! | TCAACATAAGTTAATGTATT+TGG | + | chr4.4:8617701-8617720 | MS.gene28443:intron | 20.0% |
| !! | TTCTCTCTTAATTAATTTCT+TGG | + | chr4.4:8616238-8616257 | MS.gene28443:intron | 20.0% |
| !! | TTTAACAAATACTTAACAGA+AGG | - | chr4.4:8616917-8616936 | None:intergenic | 20.0% |
| !!! | AAAGTGATACTAATGTTTTT+TGG | - | chr4.4:8616697-8616716 | None:intergenic | 20.0% |
| !!! | AAGTGATACTAATGTTTTTT+AGG | - | chr4.4:8616696-8616715 | None:intergenic | 20.0% |
| !!! | ACTCGTTTTTTATTACATTT+TGG | - | chr4.4:8617682-8617701 | None:intergenic | 20.0% |
| !!! | ATCTAAAGCTATTTTTGTTT+TGG | + | chr4.4:8615599-8615618 | MS.gene28443:intron | 20.0% |
| !!! | TGAAATTAGATATTGGTTAA+GGG | + | chr4.4:8616480-8616499 | MS.gene28443:intron | 20.0% |
| !!! | TTGAAATTAGATATTGGTTA+AGG | + | chr4.4:8616479-8616498 | MS.gene28443:intron | 20.0% |
| !!! | TTTAATGATGATGAAACTAA+AGG | - | chr4.4:8616338-8616357 | None:intergenic | 20.0% |
| !!! | TTTTAGGAAAGAGATAAAAT+TGG | - | chr4.4:8616680-8616699 | None:intergenic | 20.0% |
| !!! | TTTTGGAAAAGAGATAAAAT+AGG | - | chr4.4:8617423-8617442 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTATATTTTGGGA+CGG | + | chr4.4:8617764-8617783 | MS.gene28443:intron | 20.0% |
| !!! | TTTTTTTCAAAAAACGAGTA+AGG | - | chr4.4:8615677-8615696 | None:intergenic | 20.0% |
| ! | AATTAAAAAGTTGCCATGAT+TGG | - | chr4.4:8616971-8616990 | None:intergenic | 25.0% |
| ! | AATTCCCCAAAAAATGAAAA+TGG | - | chr4.4:8618374-8618393 | None:intergenic | 25.0% |
| ! | ATATAGCTTTCAGTAATCAA+AGG | - | chr4.4:8614853-8614872 | None:intergenic | 25.0% |
| ! | ATCTTCTTCATTTCTTTCAT+TGG | + | chr4.4:8614932-8614951 | MS.gene28443:CDS | 25.0% |
| ! | ATTCCCCAAAAAATGAAAAT+GGG | - | chr4.4:8618373-8618392 | None:intergenic | 25.0% |
| ! | CAGAACAAACACATAAATAA+GGG | - | chr4.4:8617896-8617915 | None:intergenic | 25.0% |
| ! | GAAAAGAAACAATCCATATT+TGG | + | chr4.4:8614632-8614651 | MS.gene28443:CDS | 25.0% |
| ! | GACATATTACTTACAAACAT+GGG | + | chr4.4:8618942-8618961 | MS.gene28443:CDS | 25.0% |
| ! | TATAGCTTTCAGTAATCAAA+GGG | - | chr4.4:8614852-8614871 | None:intergenic | 25.0% |
| ! | TATGTATGCTAAGTAATTAC+CGG | + | chr4.4:8616102-8616121 | MS.gene28443:intron | 25.0% |
| ! | TCAGAACAAACACATAAATA+AGG | - | chr4.4:8617897-8617916 | None:intergenic | 25.0% |
| ! | TCTTCTTCATTTCTTTCATT+GGG | + | chr4.4:8614933-8614952 | MS.gene28443:CDS | 25.0% |
| ! | TGAATTACTCTTAGCTAATT+TGG | - | chr4.4:8614979-8614998 | None:intergenic | 25.0% |
| ! | TGACATATTACTTACAAACA+TGG | + | chr4.4:8618941-8618960 | MS.gene28443:CDS | 25.0% |
| ! | TTAATAAGCTCTATATAGCA+AGG | - | chr4.4:8615330-8615349 | None:intergenic | 25.0% |
| ! | TTATATGCAATGTTTAAAGG+TGG | - | chr4.4:8615499-8615518 | None:intergenic | 25.0% |
| !! | GAAATTAGATATTGGTTAAG+GGG | + | chr4.4:8616481-8616500 | MS.gene28443:intron | 25.0% |
| !! | GTTAAATGTATTTTCCAACT+AGG | - | chr4.4:8617944-8617963 | None:intergenic | 25.0% |
| !!! | AAATTTGTTGATCTATGATC+AGG | + | chr4.4:8615181-8615200 | MS.gene28443:intron | 25.0% |
| !!! | ACCCTTTTGAAATTAGATAT+TGG | + | chr4.4:8616473-8616492 | MS.gene28443:intron | 25.0% |
| !!! | TTGTCCCATTTTCATTTTTT+GGG | + | chr4.4:8618366-8618385 | MS.gene28443:CDS | 25.0% |
| !!! | TTTGTCCCATTTTCATTTTT+TGG | + | chr4.4:8618365-8618384 | MS.gene28443:CDS | 25.0% |
| AAAAGTCATGTAGAGTTCAA+AGG | + | chr4.4:8616536-8616555 | MS.gene28443:intron | 30.0% | |
| AAACAATCCATATTTGGTTG+TGG | + | chr4.4:8614638-8614657 | MS.gene28443:CDS | 30.0% | |
| AAACACATAAATAAGGGATC+AGG | - | chr4.4:8617890-8617909 | None:intergenic | 30.0% | |
| AAGAAACATACCAGCATATA+TGG | - | chr4.4:8614676-8614695 | None:intergenic | 30.0% | |
| AATAAACACTTCTGCAACTT+TGG | + | chr4.4:8615239-8615258 | MS.gene28443:CDS | 30.0% | |
| ACGTGCCAAAATAATAAACA+TGG | - | chr4.4:8618100-8618119 | None:intergenic | 30.0% | |
| AGACTTTGAACAATGGAAAT+TGG | + | chr4.4:8618722-8618741 | MS.gene28443:CDS | 30.0% | |
| ATTGAAGTTCATGTATGTGT+TGG | + | chr4.4:8615004-8615023 | MS.gene28443:intron | 30.0% | |
| ATTGTGATGATAGGGAATAA+TGG | + | chr4.4:8618909-8618928 | MS.gene28443:intron | 30.0% | |
| CATACAAAATTGAGGTTACA+TGG | + | chr4.4:8616031-8616050 | MS.gene28443:intron | 30.0% | |
| CGTAGTATCATATCATTTAC+AGG | + | chr4.4:8616651-8616670 | MS.gene28443:intron | 30.0% | |
| GACTTTGAACAATGGAAATT+GGG | + | chr4.4:8618723-8618742 | MS.gene28443:CDS | 30.0% | |
| TAAAGACTGAATTGAGCTTA+AGG | - | chr4.4:8618679-8618698 | None:intergenic | 30.0% | |
| TAGAAAGAGACTTTGAACAA+TGG | + | chr4.4:8618715-8618734 | MS.gene28443:CDS | 30.0% | |
| TATACTATAAATTTGGACGC+AGG | + | chr4.4:8614870-8614889 | MS.gene28443:intron | 30.0% | |
| TGCATAACCATACAAAATTG+AGG | + | chr4.4:8616023-8616042 | MS.gene28443:intron | 30.0% | |
| TTTAGTGTGTAAAAGAAACG+TGG | - | chr4.4:8615139-8615158 | None:intergenic | 30.0% | |
| ! | ACTTTTCATCTCACTATTGT+GGG | + | chr4.4:8616712-8616731 | MS.gene28443:intron | 30.0% |
| ! | CATGTAACCTCAATTTTGTA+TGG | - | chr4.4:8616033-8616052 | None:intergenic | 30.0% |
| ! | CTGGTCCATGTTTATTATTT+TGG | + | chr4.4:8618092-8618111 | MS.gene28443:intron | 30.0% |
| ! | TGCACATTTTACTTAACTCT+AGG | + | chr4.4:8616428-8616447 | MS.gene28443:intron | 30.0% |
| ! | TTAAACTGACTTTCAATGAG+AGG | + | chr4.4:8615983-8616002 | MS.gene28443:intron | 30.0% |
| ! | TTTTGTATGGTTATGCAACA+TGG | - | chr4.4:8616020-8616039 | None:intergenic | 30.0% |
| !! | AAAAGGTATTAGGAAAAGAG+TGG | - | chr4.4:8614766-8614785 | None:intergenic | 30.0% |
| !! | ATGATCGATCGTTTGATTTT+CGG | + | chr4.4:8617851-8617870 | MS.gene28443:intron | 30.0% |
| !! | ATTTTTCAGTGCATATTCTG+CGG | - | chr4.4:8618016-8618035 | None:intergenic | 30.0% |
| !! | CTTTTTGATTCGACCTATTA+AGG | + | chr4.4:8617982-8618001 | MS.gene28443:intron | 30.0% |
| !!! | CATTTGTCTTTGCTTTTTCT+AGG | - | chr4.4:8615814-8615833 | None:intergenic | 30.0% |
| !!! | CTTGTTATTTTCACTCAAAC+AGG | - | chr4.4:8619295-8619314 | None:intergenic | 30.0% |
| !!! | TGTCCCATTTTCATTTTTTG+GGG | + | chr4.4:8618367-8618386 | MS.gene28443:CDS | 30.0% |
| !!! | TTTATTACATTTTGGAACGG+AGG | - | chr4.4:8617674-8617693 | None:intergenic | 30.0% |
| ACATCGAGTTTGGACATATA+TGG | + | chr4.4:8615207-8615226 | MS.gene28443:CDS | 35.0% | |
| ACGATTACCACAACCAAATA+TGG | - | chr4.4:8614648-8614667 | None:intergenic | 35.0% | |
| AGAAAATTGCTGGATCCTTA+AGG | + | chr4.4:8616309-8616328 | MS.gene28443:intron | 35.0% | |
| AGACAAAATTGTTCATGCCA+TGG | - | chr4.4:8614719-8614738 | None:intergenic | 35.0% | |
| AGATGTTCAACCAACAACTT+CGG | - | chr4.4:8615064-8615083 | None:intergenic | 35.0% | |
| AGGACCTTTGTAAAAAGCAA+GGG | - | chr4.4:8618334-8618353 | None:intergenic | 35.0% | |
| ATAGTCATGATCAGAGCTAA+TGG | - | chr4.4:8619009-8619028 | None:intergenic | 35.0% | |
| ATGATGATCCAGATAGAACA+TGG | - | chr4.4:8618422-8618441 | None:intergenic | 35.0% | |
| ATGTTCTATCTGGATCATCA+TGG | + | chr4.4:8618421-8618440 | MS.gene28443:CDS | 35.0% | |
| CATAAAACCCAACAACATCA+GGG | + | chr4.4:8618396-8618415 | MS.gene28443:CDS | 35.0% | |
| CATTCAAAGAAGAGAGCAAA+AGG | - | chr4.4:8614783-8614802 | None:intergenic | 35.0% | |
| CCAAGAAGAAGGTAATAACT+GGG | - | chr4.4:8615287-8615306 | None:intergenic | 35.0% | |
| CGGTGAAAACAAACAAAACA+AGG | - | chr4.4:8618056-8618075 | None:intergenic | 35.0% | |
| TGATATTAGTCCCTACACTT+TGG | + | chr4.4:8617054-8617073 | MS.gene28443:intron | 35.0% | |
| TTGAACAATGGAAATTGGGT+TGG | + | chr4.4:8618727-8618746 | MS.gene28443:CDS | 35.0% | |
| ! | AAACATGGGTTATAGAGAAG+AGG | + | chr4.4:8618956-8618975 | MS.gene28443:CDS | 35.0% |
| ! | AACATGGGTTATAGAGAAGA+GGG | + | chr4.4:8618957-8618976 | MS.gene28443:CDS | 35.0% |
| ! | CAAAATTGAGTGAAAGTGCA+GGG | - | chr4.4:8616887-8616906 | None:intergenic | 35.0% |
| ! | CACTTTTCATCTCACTATTG+TGG | + | chr4.4:8616711-8616730 | MS.gene28443:intron | 35.0% |
| ! | CCAGATAGCTTGATGTTTTT+CGG | - | chr4.4:8618076-8618095 | None:intergenic | 35.0% |
| ! | CTTTTCATCTCACTATTGTG+GGG | + | chr4.4:8616713-8616732 | MS.gene28443:intron | 35.0% |
| ! | CTTTTGCTCTCTTCTTTGAA+TGG | + | chr4.4:8614781-8614800 | MS.gene28443:CDS | 35.0% |
| ! | TCAAAATTGAGTGAAAGTGC+AGG | - | chr4.4:8616888-8616907 | None:intergenic | 35.0% |
| ! | TCTATGTCTACGGAAGATTT+TGG | - | chr4.4:8619264-8619283 | None:intergenic | 35.0% |
| ! | TGGGACAAAAGTTCTAATTG+AGG | - | chr4.4:8618354-8618373 | None:intergenic | 35.0% |
| ! | TTTTCATCTCACTATTGTGG+GGG | + | chr4.4:8616714-8616733 | MS.gene28443:intron | 35.0% |
| !! | AGAAGAGAGCAAAAGGTATT+AGG | - | chr4.4:8614776-8614795 | None:intergenic | 35.0% |
| !! | TGAAACTAAAGGCATCCTTA+AGG | - | chr4.4:8616327-8616346 | None:intergenic | 35.0% |
| !! | TGTTATTTGAGCAGCCTTTT+AGG | + | chr4.4:8619177-8619196 | MS.gene28443:intron | 35.0% |
| !! | TTTGATTTTCGGACTGCAAA+AGG | + | chr4.4:8617862-8617881 | MS.gene28443:intron | 35.0% |
| AAAGTCTCTTTCTACAGCCA+AGG | - | chr4.4:8618709-8618728 | None:intergenic | 40.0% | |
| AAAGTGCAGGGACTCATTTA+CGG | + | chr4.4:8617393-8617412 | MS.gene28443:intron | 40.0% | |
| AACTTATGTTGCCGTAGATG+AGG | + | chr4.4:8616278-8616297 | MS.gene28443:intron | 40.0% | |
| AAGGTGGAATTCTAGTCAGT+TGG | - | chr4.4:8615381-8615400 | None:intergenic | 40.0% | |
| ACGCAGTTATATGTGAGAGT+CGG | + | chr4.4:8615107-8615126 | MS.gene28443:intron | 40.0% | |
| ATCGTACAAGCCATATATGC+TGG | + | chr4.4:8614663-8614682 | MS.gene28443:CDS | 40.0% | |
| ATCTGGATCATCATGGATCA+AGG | + | chr4.4:8618428-8618447 | MS.gene28443:CDS | 40.0% | |
| ATCTTGCAAAACGTGGTGAA+TGG | - | chr4.4:8614914-8614933 | None:intergenic | 40.0% | |
| CCATAAAACCCAACAACATC+AGG | + | chr4.4:8618395-8618414 | MS.gene28443:CDS | 40.0% | |
| CCCAGTTATTACCTTCTTCT+TGG | + | chr4.4:8615284-8615303 | MS.gene28443:CDS | 40.0% | |
| CCGAAAAACATCAAGCTATC+TGG | + | chr4.4:8618073-8618092 | MS.gene28443:intron | 40.0% | |
| CTTGGCGAGATACTAAGTTT+GGG | + | chr4.4:8619048-8619067 | MS.gene28443:CDS | 40.0% | |
| GAAGAAGATCTTGCAAAACG+TGG | - | chr4.4:8614921-8614940 | None:intergenic | 40.0% | |
| GAGGACCTTTGTAAAAAGCA+AGG | - | chr4.4:8618335-8618354 | None:intergenic | 40.0% | |
| GCCAAGAAGAAGGTAATAAC+TGG | - | chr4.4:8615288-8615307 | None:intergenic | 40.0% | |
| GGTTATGCAACATGGAAAGA+TGG | - | chr4.4:8616012-8616031 | None:intergenic | 40.0% | |
| GTTTGTTCTGACAAGTGACA+AGG | + | chr4.4:8617906-8617925 | MS.gene28443:intron | 40.0% | |
| TAACTCTAGGCTGAGAATTC+TGG | + | chr4.4:8616441-8616460 | MS.gene28443:intron | 40.0% | |
| TAGTCCCTACACTTTGGTAT+TGG | + | chr4.4:8617060-8617079 | MS.gene28443:intron | 40.0% | |
| TCTGGATCATCATGGATCAA+GGG | + | chr4.4:8618429-8618448 | MS.gene28443:CDS | 40.0% | |
| TGATAGGGAATAATGGTGAC+TGG | + | chr4.4:8618916-8618935 | MS.gene28443:intron | 40.0% | |
| TGCGGCTACAAAACCTTAAT+AGG | - | chr4.4:8617998-8618017 | None:intergenic | 40.0% | |
| TTCATCTCACTATTGTGGGT+GGG | + | chr4.4:8617459-8617478 | MS.gene28443:intron | 40.0% | |
| TTTCATCTCACTATTGTGGG+TGG | + | chr4.4:8616715-8616734 | MS.gene28443:intron | 40.0% | |
| ! | AAGTTGCCATGATTGGTTCA+CGG | - | chr4.4:8616964-8616983 | None:intergenic | 40.0% |
| ! | ACATGGGTTATAGAGAAGAG+GGG | + | chr4.4:8618958-8618977 | MS.gene28443:CDS | 40.0% |
| ! | CCTGATGTTGTTGGGTTTTA+TGG | - | chr4.4:8618398-8618417 | None:intergenic | 40.0% |
| ! | CTTCTTTCCAACACCTTTTG+GGG | + | chr4.4:8618465-8618484 | MS.gene28443:CDS | 40.0% |
| ! | GCTTCTTTCCAACACCTTTT+GGG | + | chr4.4:8618464-8618483 | MS.gene28443:CDS | 40.0% |
| ! | TGCTTCTTTCCAACACCTTT+TGG | + | chr4.4:8618463-8618482 | MS.gene28443:CDS | 40.0% |
| !! | TTGTGAGTAGCAGCTTTGAA+GGG | - | chr4.4:8618644-8618663 | None:intergenic | 40.0% |
| !!! | GCAACCCTTGCTTTTTACAA+AGG | + | chr4.4:8618327-8618346 | MS.gene28443:CDS | 40.0% |
| AACATGGCCCTGATGTTGTT+GGG | - | chr4.4:8618406-8618425 | None:intergenic | 45.0% | |
| AAGTGCAGGGACTCATTTAC+GGG | + | chr4.4:8617394-8617413 | MS.gene28443:intron | 45.0% | |
| ACAACTTCGGCAGTTGAACT+AGG | - | chr4.4:8615051-8615070 | None:intergenic | 45.0% | |
| AGGACTGTACTTTGTGCTGT+GGG | + | chr4.4:8619218-8619237 | MS.gene28443:CDS | 45.0% | |
| AGGGACCAATACCAAAGTGT+AGG | - | chr4.4:8617068-8617087 | None:intergenic | 45.0% | |
| AGGGACTAATACCAAAGTGC+AGG | + | chr4.4:8617380-8617399 | MS.gene28443:intron | 45.0% | |
| AGTTCAACTGCCGAAGTTGT+TGG | + | chr4.4:8615051-8615070 | MS.gene28443:intron | 45.0% | |
| CCAAACTTAGTATCTCGCCA+AGG | - | chr4.4:8619050-8619069 | None:intergenic | 45.0% | |
| CCTTGGCGAGATACTAAGTT+TGG | + | chr4.4:8619047-8619066 | MS.gene28443:CDS | 45.0% | |
| CTGACAAGTGACAAGGTCAT+GGG | + | chr4.4:8617913-8617932 | MS.gene28443:intron | 45.0% | |
| GACTCTCACATATAACTGCG+TGG | - | chr4.4:8615108-8615127 | None:intergenic | 45.0% | |
| GAGTATGAGTGCCAAGAAGA+AGG | - | chr4.4:8615298-8615317 | None:intergenic | 45.0% | |
| GATCAGGATCACATCGAGTT+TGG | + | chr4.4:8615197-8615216 | MS.gene28443:intron | 45.0% | |
| GCGAGATACTAAGTTTGGGA+AGG | + | chr4.4:8619052-8619071 | MS.gene28443:CDS | 45.0% | |
| GGGACCAATACCAAAGTGTA+GGG | - | chr4.4:8617067-8617086 | None:intergenic | 45.0% | |
| GGGACTAATACCAAAGTGCA+GGG | + | chr4.4:8617381-8617400 | MS.gene28443:intron | 45.0% | |
| GGTGGTTGCAAGAAAATTGC+TGG | + | chr4.4:8616299-8616318 | MS.gene28443:intron | 45.0% | |
| GTAAATGAGTCCCTGCACTT+TGG | - | chr4.4:8617394-8617413 | None:intergenic | 45.0% | |
| GTGACATGACAGTGAAAGTG+TGG | - | chr4.4:8616584-8616603 | None:intergenic | 45.0% | |
| GTTGACATGGCTAGAAACAC+TGG | - | chr4.4:8618985-8619004 | None:intergenic | 45.0% | |
| TACAAGCCACATTCCCCAAA+AGG | - | chr4.4:8618481-8618500 | None:intergenic | 45.0% | |
| TAGGACTGTACTTTGTGCTG+TGG | + | chr4.4:8619217-8619236 | MS.gene28443:CDS | 45.0% | |
| TCAAAAGCTGCATTCGACCA+TGG | + | chr4.4:8614699-8614718 | MS.gene28443:CDS | 45.0% | |
| TCAGTCTTTAGTCGTAGCCT+TGG | + | chr4.4:8618689-8618708 | MS.gene28443:CDS | 45.0% | |
| TCATCTCACTATTGTGGGTG+GGG | + | chr4.4:8617460-8617479 | MS.gene28443:intron | 45.0% | |
| TCTGACAAGTGACAAGGTCA+TGG | + | chr4.4:8617912-8617931 | MS.gene28443:intron | 45.0% | |
| TCTTCTTGGCACTCATACTC+AGG | + | chr4.4:8615298-8615317 | MS.gene28443:CDS | 45.0% | |
| TCTTGCAACCACCTCATCTA+CGG | - | chr4.4:8616292-8616311 | None:intergenic | 45.0% | |
| TGAGAGTAAAGACAGCTGCT+GGG | + | chr4.4:8618262-8618281 | MS.gene28443:CDS | 45.0% | |
| TTATGTTGCCGTAGATGAGG+TGG | + | chr4.4:8616281-8616300 | MS.gene28443:intron | 45.0% | |
| TTCTCCTCAGCAATTCTCCT+TGG | + | chr4.4:8619030-8619049 | MS.gene28443:CDS | 45.0% | |
| TTGAGAGTAAAGACAGCTGC+TGG | + | chr4.4:8618261-8618280 | MS.gene28443:CDS | 45.0% | |
| ! | AGTTGCCATGATTGGTTCAC+GGG | - | chr4.4:8616963-8616982 | None:intergenic | 45.0% |
| ! | GGAAGCTTGCTCTATGTCTA+CGG | - | chr4.4:8619274-8619293 | None:intergenic | 45.0% |
| ! | GTTGTGAGTAGCAGCTTTGA+AGG | - | chr4.4:8618645-8618664 | None:intergenic | 45.0% |
| !! | AGGTGTTGGAAAGAAGCATG+AGG | - | chr4.4:8618461-8618480 | None:intergenic | 45.0% |
| !! | CAGAGCTAATGGTGTTGACA+TGG | - | chr4.4:8618998-8619017 | None:intergenic | 45.0% |
| !! | TAAAAAAAATAAAAAAATCA+GGG | - | chr4.4:8617087-8617106 | None:intergenic | 5.0% |
| !! | TTAAAAAAAATAAAAAAATC+AGG | - | chr4.4:8617088-8617107 | None:intergenic | 5.0% |
| AACTGGGAGACAGTTAGCAG+TGG | - | chr4.4:8615271-8615290 | None:intergenic | 50.0% | |
| ATCTCACTATTGTGGGGGTG+GGG | + | chr4.4:8616719-8616738 | MS.gene28443:intron | 50.0% | |
| CAAAACGTGGTGAATGGCAG+AGG | - | chr4.4:8614908-8614927 | None:intergenic | 50.0% | |
| CATCAGGGCCATGTTCTATC+TGG | + | chr4.4:8618411-8618430 | MS.gene28443:CDS | 50.0% | |
| CATCTCACTATTGTGGGGGT+GGG | + | chr4.4:8616718-8616737 | MS.gene28443:intron | 50.0% | |
| CCAAACCGCAGCTACCTAAA+AGG | - | chr4.4:8619194-8619213 | None:intergenic | 50.0% | |
| GAACATGGCCCTGATGTTGT+TGG | - | chr4.4:8618407-8618426 | None:intergenic | 50.0% | |
| GAGAGTAAAGACAGCTGCTG+GGG | + | chr4.4:8618263-8618282 | MS.gene28443:CDS | 50.0% | |
| GAGGTTACATGGCAAGTGAG+TGG | + | chr4.4:8616042-8616061 | MS.gene28443:intron | 50.0% | |
| GGACTGTACTTTGTGCTGTG+GGG | + | chr4.4:8619219-8619238 | MS.gene28443:CDS | 50.0% | |
| GGTCATGGGTGTTTCCTAGT+TGG | + | chr4.4:8617927-8617946 | MS.gene28443:intron | 50.0% | |
| TCATCTCACTATTGTGGGGG+TGG | + | chr4.4:8616717-8616736 | MS.gene28443:intron | 50.0% | |
| ! | AGCTAAGTTGGCTGGTGTTG+TGG | + | chr4.4:8618287-8618306 | MS.gene28443:CDS | 50.0% |
| ! | CCACATTCCCCAAAAGGTGT+TGG | - | chr4.4:8618475-8618494 | None:intergenic | 50.0% |
| !! | AGCAGCCTTTTAGGTAGCTG+CGG | + | chr4.4:8619186-8619205 | MS.gene28443:intron | 50.0% |
| !! | CCAACACCTTTTGGGGAATG+TGG | + | chr4.4:8618472-8618491 | MS.gene28443:CDS | 50.0% |
| !! | CCTTTTAGGTAGCTGCGGTT+TGG | + | chr4.4:8619191-8619210 | MS.gene28443:CDS | 50.0% |
| !! | GCTGGTGTTGTGGCATGTTT+GGG | + | chr4.4:8618297-8618316 | MS.gene28443:CDS | 50.0% |
| AACGTGGTGAATGGCAGAGG+TGG | - | chr4.4:8614905-8614924 | None:intergenic | 55.0% | |
| CTCGCCAAGGAGAATTGCTG+AGG | - | chr4.4:8619037-8619056 | None:intergenic | 55.0% | |
| GAGACAGTTAGCAGTGGCAG+CGG | - | chr4.4:8615265-8615284 | None:intergenic | 55.0% | |
| TCTCACTATTGTGGGTGGGG+TGG | + | chr4.4:8617463-8617482 | MS.gene28443:intron | 55.0% | |
| ! | GGTGTTGTGGCATGTTTGGG+TGG | + | chr4.4:8618300-8618319 | MS.gene28443:CDS | 55.0% |
| !! | GGCTGGTGTTGTGGCATGTT+TGG | + | chr4.4:8618296-8618315 | MS.gene28443:CDS | 55.0% |
| !! | GGTAGCTGCGGTTTGGTTCT+AGG | + | chr4.4:8619198-8619217 | MS.gene28443:CDS | 55.0% |
| AGCTGCTGGGGCAGCTAAGT+TGG | + | chr4.4:8618275-8618294 | MS.gene28443:CDS | 60.0% | |
| GCGTGCCCGTGAACCAATCA+TGG | + | chr4.4:8616955-8616974 | MS.gene28443:intron | 60.0% | |
| TCACTATTGTGGGGGTGGGG+TGG | + | chr4.4:8616722-8616741 | MS.gene28443:intron | 60.0% | |
| !! | CACGGGCACGCCGTTAGTTT+TGG | - | chr4.4:8616946-8616965 | None:intergenic | 60.0% |
| ! | GCTGGGGCAGCTAAGTTGGC+TGG | + | chr4.4:8618279-8618298 | MS.gene28443:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 8614630 | 8619317 | 8614630 | ID=MS.gene28443 |
| chr4.4 | mRNA | 8614630 | 8619317 | 8614630 | ID=MS.gene28443.t1;Parent=MS.gene28443 |
| chr4.4 | exon | 8614630 | 8614802 | 8614630 | ID=MS.gene28443.t1.exon1;Parent=MS.gene28443.t1 |
| chr4.4 | CDS | 8614630 | 8614802 | 8614630 | ID=cds.MS.gene28443.t1;Parent=MS.gene28443.t1 |
| chr4.4 | exon | 8614892 | 8614954 | 8614892 | ID=MS.gene28443.t1.exon2;Parent=MS.gene28443.t1 |
| chr4.4 | CDS | 8614892 | 8614954 | 8614892 | ID=cds.MS.gene28443.t1;Parent=MS.gene28443.t1 |
| chr4.4 | exon | 8615203 | 8615319 | 8615203 | ID=MS.gene28443.t1.exon3;Parent=MS.gene28443.t1 |
| chr4.4 | CDS | 8615203 | 8615319 | 8615203 | ID=cds.MS.gene28443.t1;Parent=MS.gene28443.t1 |
| chr4.4 | exon | 8618251 | 8618506 | 8618251 | ID=MS.gene28443.t1.exon4;Parent=MS.gene28443.t1 |
| chr4.4 | CDS | 8618251 | 8618506 | 8618251 | ID=cds.MS.gene28443.t1;Parent=MS.gene28443.t1 |
| chr4.4 | exon | 8618621 | 8618779 | 8618621 | ID=MS.gene28443.t1.exon5;Parent=MS.gene28443.t1 |
| chr4.4 | CDS | 8618621 | 8618779 | 8618621 | ID=cds.MS.gene28443.t1;Parent=MS.gene28443.t1 |
| chr4.4 | exon | 8618922 | 8619073 | 8618922 | ID=MS.gene28443.t1.exon6;Parent=MS.gene28443.t1 |
| chr4.4 | CDS | 8618922 | 8619073 | 8618922 | ID=cds.MS.gene28443.t1;Parent=MS.gene28443.t1 |
| chr4.4 | exon | 8619191 | 8619317 | 8619191 | ID=MS.gene28443.t1.exon7;Parent=MS.gene28443.t1 |
| chr4.4 | CDS | 8619191 | 8619317 | 8619191 | ID=cds.MS.gene28443.t1;Parent=MS.gene28443.t1 |
| Gene Sequence |
| Protein sequence |
