Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012466.t1 | XP_013458553.1 | 97.3 | 370 | 9 | 1 | 1 | 370 | 1 | 369 | 2.80E-198 | 701 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012466.t1 | Q9SUD5 | 44.1 | 365 | 189 | 5 | 7 | 370 | 6 | 356 | 7.1e-81 | 302.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012466.t1 | A0A072URZ6 | 97.3 | 370 | 9 | 1 | 1 | 370 | 1 | 369 | 2.1e-198 | 701.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91824 | MS.gene012466 | PPI |
| MS.gene70269 | MS.gene012466 | PPI |
| MS.gene022543 | MS.gene012466 | PPI |
| MS.gene030673 | MS.gene012466 | PPI |
| MS.gene58123 | MS.gene012466 | PPI |
| MS.gene28443 | MS.gene012466 | PPI |
| MS.gene055336 | MS.gene012466 | PPI |
| MS.gene62756 | MS.gene012466 | PPI |
| MS.gene055334 | MS.gene012466 | PPI |
| MS.gene022545 | MS.gene012466 | PPI |
| MS.gene31007 | MS.gene012466 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012466.t1 | MTR_4g129650 | 97.297 | 370 | 9 | 1 | 1 | 370 | 1 | 369 | 0.0 | 736 |
| MS.gene012466.t1 | MTR_4g129650 | 96.958 | 263 | 7 | 1 | 108 | 370 | 1 | 262 | 0.0 | 526 |
| MS.gene012466.t1 | MTR_8g006010 | 48.767 | 365 | 174 | 6 | 1 | 358 | 1 | 359 | 2.45e-114 | 338 |
| MS.gene012466.t1 | MTR_2g065550 | 46.301 | 365 | 183 | 3 | 4 | 356 | 6 | 369 | 2.68e-109 | 325 |
| MS.gene012466.t1 | MTR_8g006120 | 48.541 | 377 | 183 | 6 | 1 | 370 | 1 | 373 | 3.15e-109 | 325 |
| MS.gene012466.t1 | MTR_8g006090 | 48.361 | 366 | 172 | 6 | 2 | 360 | 3 | 358 | 1.66e-105 | 314 |
| MS.gene012466.t1 | MTR_8g006050 | 45.161 | 372 | 156 | 8 | 4 | 360 | 7 | 345 | 5.61e-97 | 292 |
| MS.gene012466.t1 | MTR_8g006090 | 47.588 | 311 | 151 | 5 | 2 | 305 | 3 | 308 | 1.34e-84 | 259 |
| MS.gene012466.t1 | MTR_8g006090 | 50.350 | 286 | 129 | 4 | 80 | 360 | 1 | 278 | 2.92e-83 | 255 |
| MS.gene012466.t1 | MTR_7g111830 | 34.897 | 341 | 198 | 5 | 9 | 334 | 8 | 339 | 1.00e-65 | 213 |
| MS.gene012466.t1 | MTR_1g038560 | 35.103 | 339 | 212 | 4 | 9 | 344 | 4 | 337 | 1.27e-64 | 209 |
| MS.gene012466.t1 | MTR_1g068630 | 33.828 | 337 | 211 | 6 | 9 | 340 | 16 | 345 | 1.21e-63 | 207 |
| MS.gene012466.t1 | MTR_2g016710 | 32.955 | 352 | 218 | 5 | 1 | 339 | 1 | 347 | 3.20e-63 | 206 |
| MS.gene012466.t1 | MTR_8g006090 | 47.244 | 254 | 123 | 4 | 2 | 249 | 3 | 251 | 1.63e-62 | 202 |
| MS.gene012466.t1 | MTR_6g036450 | 34.188 | 351 | 214 | 5 | 9 | 352 | 17 | 357 | 1.35e-61 | 202 |
| MS.gene012466.t1 | MTR_1g114210 | 34.493 | 345 | 205 | 6 | 9 | 344 | 12 | 344 | 6.49e-61 | 199 |
| MS.gene012466.t1 | MTR_3g112480 | 34.483 | 377 | 214 | 8 | 13 | 363 | 25 | 394 | 1.42e-60 | 200 |
| MS.gene012466.t1 | MTR_1g023180 | 33.598 | 378 | 219 | 7 | 11 | 361 | 24 | 396 | 3.14e-60 | 199 |
| MS.gene012466.t1 | MTR_3g012420 | 36.970 | 330 | 197 | 5 | 9 | 332 | 18 | 342 | 3.99e-60 | 199 |
| MS.gene012466.t1 | MTR_2g007960 | 31.267 | 371 | 238 | 7 | 3 | 361 | 7 | 372 | 9.76e-60 | 198 |
| MS.gene012466.t1 | MTR_2g027030 | 35.230 | 369 | 217 | 9 | 4 | 361 | 8 | 365 | 9.79e-60 | 197 |
| MS.gene012466.t1 | MTR_1g074120 | 33.046 | 348 | 211 | 6 | 9 | 345 | 17 | 353 | 6.58e-59 | 195 |
| MS.gene012466.t1 | MTR_6g081840 | 34.211 | 342 | 212 | 5 | 17 | 350 | 19 | 355 | 1.65e-58 | 194 |
| MS.gene012466.t1 | MTR_2g007990 | 32.181 | 376 | 237 | 7 | 4 | 367 | 11 | 380 | 2.72e-58 | 194 |
| MS.gene012466.t1 | MTR_8g041390 | 31.593 | 364 | 235 | 6 | 13 | 369 | 18 | 374 | 8.08e-58 | 193 |
| MS.gene012466.t1 | MTR_1g030400 | 31.092 | 357 | 215 | 7 | 17 | 352 | 16 | 362 | 1.40e-57 | 192 |
| MS.gene012466.t1 | MTR_1g074160 | 33.815 | 346 | 217 | 5 | 4 | 344 | 9 | 347 | 2.54e-57 | 190 |
| MS.gene012466.t1 | MTR_7g100050 | 32.873 | 362 | 219 | 9 | 9 | 362 | 14 | 359 | 2.78e-57 | 191 |
| MS.gene012466.t1 | MTR_3g072530 | 32.102 | 352 | 222 | 8 | 9 | 351 | 15 | 358 | 1.36e-56 | 189 |
| MS.gene012466.t1 | MTR_2g007260 | 35.493 | 355 | 212 | 6 | 3 | 345 | 9 | 358 | 3.49e-56 | 189 |
| MS.gene012466.t1 | MTR_1g073990 | 32.840 | 338 | 222 | 3 | 9 | 344 | 17 | 351 | 4.51e-56 | 187 |
| MS.gene012466.t1 | MTR_1g070175 | 31.014 | 345 | 225 | 6 | 8 | 350 | 20 | 353 | 7.46e-56 | 187 |
| MS.gene012466.t1 | MTR_1g074070 | 33.430 | 344 | 204 | 9 | 3 | 333 | 11 | 342 | 2.93e-55 | 185 |
| MS.gene012466.t1 | MTR_8g092650 | 32.853 | 347 | 214 | 5 | 9 | 346 | 6 | 342 | 3.85e-55 | 185 |
| MS.gene012466.t1 | MTR_2g007970 | 32.653 | 392 | 228 | 10 | 4 | 369 | 8 | 389 | 5.52e-54 | 183 |
| MS.gene012466.t1 | MTR_3g095450 | 32.597 | 362 | 228 | 8 | 1 | 354 | 1 | 354 | 1.04e-53 | 181 |
| MS.gene012466.t1 | MTR_1g051120 | 32.456 | 342 | 221 | 6 | 9 | 344 | 17 | 354 | 1.29e-53 | 181 |
| MS.gene012466.t1 | MTR_3g095420 | 29.661 | 354 | 235 | 6 | 9 | 353 | 8 | 356 | 1.50e-53 | 181 |
| MS.gene012466.t1 | MTR_2g102340 | 32.951 | 349 | 220 | 8 | 4 | 345 | 8 | 349 | 1.61e-53 | 181 |
| MS.gene012466.t1 | MTR_3g095460 | 30.792 | 341 | 227 | 4 | 4 | 338 | 1 | 338 | 3.61e-53 | 179 |
| MS.gene012466.t1 | MTR_3g072500 | 29.912 | 341 | 228 | 5 | 9 | 343 | 21 | 356 | 1.03e-51 | 177 |
| MS.gene012466.t1 | MTR_1g030580 | 31.429 | 350 | 228 | 6 | 3 | 347 | 11 | 353 | 1.25e-51 | 176 |
| MS.gene012466.t1 | MTR_1g074020 | 31.549 | 355 | 217 | 8 | 9 | 353 | 14 | 352 | 1.70e-51 | 175 |
| MS.gene012466.t1 | MTR_3g090550 | 34.921 | 315 | 195 | 5 | 23 | 334 | 21 | 328 | 2.10e-51 | 175 |
| MS.gene012466.t1 | MTR_2g016710 | 31.935 | 310 | 204 | 4 | 1 | 308 | 1 | 305 | 2.49e-51 | 174 |
| MS.gene012466.t1 | MTR_5g021160 | 32.402 | 358 | 219 | 8 | 16 | 360 | 15 | 362 | 3.02e-51 | 175 |
| MS.gene012466.t1 | MTR_3g112480 | 33.871 | 310 | 177 | 6 | 79 | 363 | 33 | 339 | 6.73e-51 | 173 |
| MS.gene012466.t1 | MTR_3g072560 | 32.011 | 353 | 224 | 7 | 9 | 354 | 19 | 362 | 8.93e-51 | 174 |
| MS.gene012466.t1 | MTR_4g094340 | 31.476 | 359 | 221 | 8 | 9 | 357 | 10 | 353 | 4.54e-50 | 171 |
| MS.gene012466.t1 | MTR_4g094340 | 31.856 | 361 | 217 | 9 | 9 | 357 | 28 | 371 | 8.21e-50 | 171 |
| MS.gene012466.t1 | MTR_4g106720 | 33.016 | 315 | 197 | 6 | 33 | 339 | 37 | 345 | 3.03e-49 | 169 |
| MS.gene012466.t1 | MTR_5g034990 | 31.845 | 336 | 213 | 6 | 25 | 359 | 31 | 351 | 3.24e-47 | 164 |
| MS.gene012466.t1 | MTR_0096s0100 | 28.653 | 349 | 244 | 3 | 7 | 353 | 17 | 362 | 5.30e-47 | 164 |
| MS.gene012466.t1 | MTR_4g094360 | 32.530 | 332 | 212 | 6 | 9 | 333 | 15 | 341 | 2.00e-45 | 160 |
| MS.gene012466.t1 | MTR_8g092650 | 33.457 | 269 | 165 | 3 | 86 | 346 | 2 | 264 | 2.10e-45 | 157 |
| MS.gene012466.t1 | MTR_1g030600 | 29.301 | 372 | 236 | 7 | 11 | 359 | 21 | 388 | 4.89e-45 | 159 |
| MS.gene012466.t1 | MTR_4g094362 | 31.642 | 335 | 222 | 5 | 9 | 339 | 15 | 346 | 8.12e-45 | 158 |
| MS.gene012466.t1 | MTR_0103s0090 | 31.884 | 345 | 199 | 8 | 28 | 350 | 31 | 361 | 1.71e-44 | 157 |
| MS.gene012466.t1 | MTR_5g025330 | 31.135 | 379 | 229 | 8 | 1 | 362 | 3 | 366 | 3.00e-43 | 158 |
| MS.gene012466.t1 | MTR_6g007743 | 31.085 | 341 | 223 | 6 | 7 | 343 | 11 | 343 | 1.76e-42 | 152 |
| MS.gene012466.t1 | MTR_4g094342 | 30.581 | 327 | 215 | 4 | 4 | 322 | 9 | 331 | 2.65e-42 | 151 |
| MS.gene012466.t1 | MTR_3g095440 | 30.495 | 364 | 233 | 8 | 1 | 354 | 1 | 354 | 3.73e-42 | 151 |
| MS.gene012466.t1 | MTR_3g072500 | 31.225 | 253 | 168 | 3 | 96 | 343 | 2 | 253 | 4.67e-42 | 149 |
| MS.gene012466.t1 | MTR_4g094340 | 33.818 | 275 | 167 | 5 | 90 | 357 | 21 | 287 | 1.05e-41 | 148 |
| MS.gene012466.t1 | MTR_5g034910 | 32.047 | 337 | 216 | 6 | 4 | 334 | 3 | 332 | 1.41e-41 | 149 |
| MS.gene012466.t1 | MTR_6g007760 | 32.746 | 284 | 182 | 4 | 28 | 307 | 31 | 309 | 2.80e-41 | 147 |
| MS.gene012466.t1 | MTR_4g094352 | 30.747 | 348 | 224 | 4 | 9 | 344 | 13 | 355 | 3.45e-41 | 149 |
| MS.gene012466.t1 | MTR_5g089390 | 30.383 | 339 | 222 | 6 | 13 | 349 | 19 | 345 | 1.05e-40 | 147 |
| MS.gene012466.t1 | MTR_3g072520 | 28.863 | 343 | 235 | 5 | 9 | 345 | 10 | 349 | 1.40e-40 | 147 |
| MS.gene012466.t1 | MTR_8g006090 | 50.000 | 174 | 80 | 2 | 80 | 249 | 1 | 171 | 1.49e-40 | 142 |
| MS.gene012466.t1 | MTR_5g025290 | 30.612 | 343 | 215 | 6 | 25 | 349 | 28 | 365 | 2.10e-40 | 147 |
| MS.gene012466.t1 | MTR_5g025290 | 29.863 | 365 | 233 | 6 | 3 | 349 | 34 | 393 | 3.35e-40 | 147 |
| MS.gene012466.t1 | MTR_5g021160 | 32.028 | 281 | 171 | 7 | 93 | 360 | 6 | 279 | 6.33e-40 | 143 |
| MS.gene012466.t1 | MTR_0103s0090 | 32.234 | 273 | 164 | 5 | 94 | 350 | 3 | 270 | 2.97e-39 | 141 |
| MS.gene012466.t1 | MTR_1g014510 | 31.622 | 370 | 224 | 9 | 1 | 350 | 1 | 361 | 6.44e-39 | 144 |
| MS.gene012466.t1 | MTR_3g019050 | 29.201 | 363 | 234 | 7 | 13 | 366 | 23 | 371 | 8.77e-39 | 142 |
| MS.gene012466.t1 | MTR_6g007750 | 29.428 | 367 | 235 | 10 | 8 | 367 | 12 | 361 | 1.50e-38 | 141 |
| MS.gene012466.t1 | MTR_4g094360 | 34.127 | 252 | 157 | 4 | 89 | 333 | 45 | 294 | 3.08e-38 | 140 |
| MS.gene012466.t1 | MTR_5g025370 | 29.885 | 348 | 217 | 7 | 25 | 353 | 27 | 366 | 3.36e-38 | 141 |
| MS.gene012466.t1 | MTR_5g034930 | 30.380 | 316 | 213 | 5 | 28 | 339 | 26 | 338 | 5.68e-38 | 139 |
| MS.gene012466.t1 | MTR_3g112480 | 31.599 | 269 | 156 | 6 | 120 | 363 | 2 | 267 | 6.90e-38 | 137 |
| MS.gene012466.t1 | MTR_5g068790 | 28.152 | 341 | 231 | 5 | 13 | 347 | 23 | 355 | 1.39e-37 | 139 |
| MS.gene012466.t1 | MTR_5g025400 | 29.132 | 357 | 220 | 7 | 25 | 362 | 28 | 370 | 1.62e-37 | 139 |
| MS.gene012466.t1 | MTR_5g034980 | 30.065 | 306 | 209 | 4 | 28 | 331 | 27 | 329 | 2.01e-37 | 138 |
| MS.gene012466.t1 | MTR_6g007747 | 32.410 | 361 | 225 | 8 | 9 | 367 | 13 | 356 | 4.78e-37 | 137 |
| MS.gene012466.t1 | MTR_6g007740 | 29.912 | 341 | 217 | 7 | 7 | 339 | 11 | 337 | 7.52e-36 | 136 |
| MS.gene012466.t1 | MTR_5g069040 | 26.243 | 362 | 250 | 6 | 13 | 366 | 23 | 375 | 1.79e-35 | 134 |
| MS.gene012466.t1 | MTR_4g094360 | 31.250 | 304 | 197 | 6 | 9 | 305 | 15 | 313 | 1.93e-35 | 132 |
| MS.gene012466.t1 | MTR_5g025340 | 29.063 | 320 | 206 | 5 | 25 | 327 | 27 | 342 | 4.24e-35 | 132 |
| MS.gene012466.t1 | MTR_1g074160 | 33.193 | 238 | 149 | 3 | 4 | 238 | 9 | 239 | 8.01e-34 | 126 |
| MS.gene012466.t1 | MTR_6g007757 | 29.429 | 350 | 233 | 8 | 21 | 369 | 26 | 362 | 1.64e-32 | 125 |
| MS.gene012466.t1 | MTR_6g007753 | 28.528 | 326 | 212 | 7 | 47 | 367 | 333 | 642 | 5.74e-31 | 124 |
| MS.gene012466.t1 | MTR_6g007753 | 28.235 | 255 | 167 | 5 | 116 | 367 | 77 | 318 | 3.18e-22 | 98.6 |
| MS.gene012466.t1 | MTR_8g072350 | 28.097 | 331 | 215 | 5 | 25 | 337 | 26 | 351 | 6.35e-31 | 121 |
| MS.gene012466.t1 | MTR_2g102340 | 31.461 | 267 | 171 | 6 | 4 | 265 | 34 | 293 | 7.87e-30 | 117 |
| MS.gene012466.t1 | MTR_5g034970 | 29.012 | 324 | 212 | 5 | 13 | 334 | 12 | 319 | 9.59e-30 | 117 |
| MS.gene012466.t1 | MTR_5g012650 | 29.775 | 356 | 218 | 9 | 13 | 356 | 13 | 348 | 1.82e-29 | 116 |
| MS.gene012466.t1 | MTR_3g072500 | 29.876 | 241 | 159 | 4 | 9 | 244 | 21 | 256 | 7.06e-29 | 113 |
| MS.gene012466.t1 | MTR_3g095440 | 30.682 | 264 | 166 | 5 | 1 | 255 | 1 | 256 | 7.60e-29 | 113 |
| MS.gene012466.t1 | MTR_5g021160 | 32.794 | 247 | 154 | 4 | 16 | 256 | 15 | 255 | 4.09e-28 | 111 |
| MS.gene012466.t1 | MTR_3g072530 | 34.826 | 201 | 117 | 6 | 9 | 203 | 15 | 207 | 4.49e-28 | 112 |
| MS.gene012466.t1 | MTR_4g094340 | 30.279 | 251 | 157 | 5 | 9 | 250 | 10 | 251 | 7.77e-27 | 107 |
| MS.gene012466.t1 | MTR_4g094340 | 30.279 | 251 | 157 | 5 | 9 | 250 | 28 | 269 | 1.07e-26 | 107 |
| MS.gene012466.t1 | MTR_4g100840 | 28.969 | 359 | 216 | 11 | 13 | 357 | 19 | 352 | 1.92e-26 | 108 |
| MS.gene012466.t1 | MTR_3g072500 | 30.244 | 205 | 133 | 4 | 9 | 208 | 21 | 220 | 4.67e-23 | 96.3 |
| MS.gene012466.t1 | MTR_1g052205 | 26.122 | 245 | 158 | 6 | 125 | 353 | 14 | 251 | 1.75e-22 | 95.5 |
| MS.gene012466.t1 | MTR_1g051120 | 30.151 | 199 | 135 | 2 | 9 | 206 | 17 | 212 | 1.37e-21 | 92.0 |
| MS.gene012466.t1 | MTR_4g094340 | 30.244 | 205 | 125 | 5 | 9 | 204 | 28 | 223 | 1.01e-20 | 90.1 |
| MS.gene012466.t1 | MTR_1g051120 | 29.592 | 196 | 134 | 2 | 9 | 203 | 17 | 209 | 1.46e-20 | 90.5 |
| MS.gene012466.t1 | MTR_6g007757 | 28.571 | 224 | 155 | 4 | 21 | 244 | 26 | 244 | 9.40e-20 | 88.6 |
| MS.gene012466.t1 | MTR_5g034980 | 28.767 | 219 | 152 | 3 | 28 | 245 | 27 | 242 | 1.11e-18 | 85.9 |
| MS.gene012466.t1 | MTR_4g094342 | 27.830 | 212 | 144 | 2 | 4 | 209 | 9 | 217 | 4.49e-16 | 77.8 |
| MS.gene012466.t1 | MTR_1g014790 | 36.842 | 114 | 69 | 1 | 94 | 204 | 46 | 159 | 7.05e-14 | 70.1 |
| MS.gene012466.t1 | MTR_4g094348 | 32.374 | 139 | 79 | 4 | 91 | 218 | 2 | 136 | 3.71e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012466.t1 | AT4G30420 | 43.968 | 373 | 194 | 6 | 1 | 360 | 1 | 371 | 5.26e-108 | 322 |
| MS.gene012466.t1 | AT4G28040 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 2.99e-106 | 317 |
| MS.gene012466.t1 | AT4G28040 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 2.99e-106 | 317 |
| MS.gene012466.t1 | AT4G28040 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 2.99e-106 | 317 |
| MS.gene012466.t1 | AT4G28040 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 2.99e-106 | 317 |
| MS.gene012466.t1 | AT4G28040 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 2.99e-106 | 317 |
| MS.gene012466.t1 | AT4G30420 | 43.681 | 364 | 190 | 6 | 11 | 361 | 1 | 362 | 1.04e-103 | 310 |
| MS.gene012466.t1 | AT1G09380 | 36.533 | 323 | 196 | 3 | 8 | 324 | 7 | 326 | 5.63e-63 | 206 |
| MS.gene012466.t1 | AT1G75500 | 36.585 | 328 | 192 | 5 | 11 | 327 | 22 | 344 | 2.59e-62 | 204 |
| MS.gene012466.t1 | AT1G75500 | 36.585 | 328 | 192 | 5 | 11 | 327 | 22 | 344 | 2.59e-62 | 204 |
| MS.gene012466.t1 | AT3G18200 | 35.457 | 361 | 208 | 9 | 10 | 361 | 36 | 380 | 4.09e-58 | 193 |
| MS.gene012466.t1 | AT2G37460 | 31.880 | 367 | 226 | 9 | 9 | 361 | 15 | 371 | 8.02e-57 | 190 |
| MS.gene012466.t1 | AT3G30340 | 35.435 | 333 | 195 | 7 | 11 | 334 | 17 | 338 | 1.47e-55 | 186 |
| MS.gene012466.t1 | AT4G01440 | 33.528 | 343 | 215 | 7 | 1 | 336 | 1 | 337 | 1.35e-54 | 184 |
| MS.gene012466.t1 | AT1G21890 | 31.302 | 361 | 219 | 6 | 9 | 355 | 11 | 356 | 8.69e-54 | 182 |
| MS.gene012466.t1 | AT5G07050 | 32.402 | 358 | 215 | 7 | 9 | 347 | 18 | 367 | 1.17e-53 | 182 |
| MS.gene012466.t1 | AT5G13670 | 28.726 | 369 | 239 | 7 | 9 | 366 | 8 | 363 | 4.65e-53 | 180 |
| MS.gene012466.t1 | AT5G64700 | 30.682 | 352 | 232 | 3 | 9 | 351 | 8 | 356 | 1.53e-52 | 178 |
| MS.gene012466.t1 | AT2G39510 | 31.909 | 351 | 220 | 7 | 3 | 341 | 2 | 345 | 1.88e-52 | 178 |
| MS.gene012466.t1 | AT4G08300 | 30.618 | 356 | 227 | 7 | 2 | 347 | 4 | 349 | 2.23e-51 | 176 |
| MS.gene012466.t1 | AT1G43650 | 32.845 | 341 | 219 | 5 | 11 | 349 | 9 | 341 | 5.27e-51 | 174 |
| MS.gene012466.t1 | AT2G40900 | 30.422 | 332 | 215 | 6 | 9 | 334 | 11 | 332 | 5.50e-49 | 170 |
| MS.gene012466.t1 | AT3G53210 | 32.000 | 350 | 222 | 6 | 11 | 353 | 12 | 352 | 5.58e-49 | 169 |
| MS.gene012466.t1 | AT1G11460 | 33.538 | 325 | 208 | 5 | 9 | 329 | 16 | 336 | 8.84e-49 | 168 |
| MS.gene012466.t1 | AT5G40240 | 35.714 | 308 | 184 | 7 | 28 | 327 | 39 | 340 | 1.48e-48 | 168 |
| MS.gene012466.t1 | AT5G40240 | 35.714 | 308 | 184 | 7 | 28 | 327 | 39 | 340 | 1.48e-48 | 168 |
| MS.gene012466.t1 | AT1G44800 | 30.337 | 356 | 233 | 6 | 2 | 350 | 4 | 351 | 1.88e-48 | 168 |
| MS.gene012466.t1 | AT5G40230 | 34.985 | 343 | 199 | 8 | 28 | 358 | 40 | 370 | 2.16e-48 | 167 |
| MS.gene012466.t1 | AT4G01430 | 31.768 | 362 | 227 | 10 | 9 | 355 | 9 | 365 | 2.98e-48 | 167 |
| MS.gene012466.t1 | AT5G40240 | 35.714 | 308 | 184 | 7 | 28 | 327 | 53 | 354 | 3.29e-48 | 167 |
| MS.gene012466.t1 | AT4G08290 | 30.663 | 362 | 235 | 8 | 9 | 361 | 13 | 367 | 1.15e-47 | 166 |
| MS.gene012466.t1 | AT1G11450 | 31.594 | 345 | 217 | 6 | 9 | 344 | 16 | 350 | 1.29e-47 | 165 |
| MS.gene012466.t1 | AT4G01440 | 32.166 | 314 | 201 | 6 | 1 | 308 | 1 | 308 | 6.84e-47 | 162 |
| MS.gene012466.t1 | AT1G11450 | 32.797 | 311 | 190 | 6 | 43 | 344 | 6 | 306 | 1.53e-45 | 158 |
| MS.gene012466.t1 | AT1G01070 | 30.145 | 345 | 231 | 5 | 4 | 344 | 11 | 349 | 1.09e-44 | 158 |
| MS.gene012466.t1 | AT1G11450 | 35.125 | 279 | 168 | 5 | 75 | 344 | 25 | 299 | 6.62e-44 | 154 |
| MS.gene012466.t1 | AT2G37450 | 29.545 | 352 | 210 | 7 | 1 | 347 | 1 | 319 | 1.89e-43 | 154 |
| MS.gene012466.t1 | AT1G68170 | 31.884 | 345 | 222 | 5 | 10 | 348 | 4 | 341 | 7.76e-43 | 152 |
| MS.gene012466.t1 | AT3G56620 | 29.560 | 318 | 215 | 5 | 9 | 324 | 11 | 321 | 9.44e-43 | 153 |
| MS.gene012466.t1 | AT1G68170 | 31.884 | 345 | 222 | 5 | 10 | 348 | 14 | 351 | 1.17e-42 | 152 |
| MS.gene012466.t1 | AT1G21890 | 30.818 | 318 | 200 | 5 | 2 | 305 | 4 | 315 | 4.09e-42 | 150 |
| MS.gene012466.t1 | AT1G11450 | 35.249 | 261 | 159 | 4 | 90 | 344 | 2 | 258 | 5.50e-42 | 148 |
| MS.gene012466.t1 | AT3G53210 | 32.482 | 274 | 174 | 4 | 86 | 353 | 27 | 295 | 1.93e-40 | 145 |
| MS.gene012466.t1 | AT3G28050 | 28.962 | 366 | 242 | 7 | 9 | 369 | 12 | 364 | 2.48e-40 | 146 |
| MS.gene012466.t1 | AT4G01440 | 34.632 | 231 | 144 | 4 | 111 | 336 | 1 | 229 | 2.92e-40 | 143 |
| MS.gene012466.t1 | AT4G01440 | 34.632 | 231 | 144 | 4 | 111 | 336 | 1 | 229 | 2.92e-40 | 143 |
| MS.gene012466.t1 | AT1G01070 | 32.852 | 277 | 176 | 5 | 75 | 344 | 29 | 302 | 7.01e-40 | 144 |
| MS.gene012466.t1 | AT4G01450 | 32.456 | 342 | 220 | 6 | 1 | 338 | 1 | 335 | 1.68e-39 | 144 |
| MS.gene012466.t1 | AT4G15540 | 33.237 | 346 | 205 | 7 | 9 | 343 | 17 | 347 | 4.30e-39 | 142 |
| MS.gene012466.t1 | AT4G15540 | 33.237 | 346 | 205 | 7 | 9 | 343 | 17 | 347 | 4.30e-39 | 142 |
| MS.gene012466.t1 | AT3G18200 | 34.733 | 262 | 151 | 7 | 108 | 361 | 1 | 250 | 4.61e-39 | 140 |
| MS.gene012466.t1 | AT4G01440 | 33.333 | 261 | 163 | 5 | 1 | 256 | 1 | 255 | 1.38e-37 | 136 |
| MS.gene012466.t1 | AT4G01430 | 31.392 | 309 | 199 | 8 | 5 | 305 | 5 | 308 | 7.80e-37 | 135 |
| MS.gene012466.t1 | AT1G25270 | 27.378 | 347 | 241 | 6 | 10 | 351 | 4 | 344 | 1.17e-36 | 136 |
| MS.gene012466.t1 | AT3G28070 | 31.907 | 257 | 166 | 4 | 94 | 345 | 7 | 259 | 1.61e-36 | 134 |
| MS.gene012466.t1 | AT5G40210 | 29.755 | 326 | 205 | 5 | 5 | 327 | 10 | 314 | 2.56e-36 | 135 |
| MS.gene012466.t1 | AT3G28130 | 30.682 | 264 | 172 | 4 | 94 | 349 | 9 | 269 | 2.75e-36 | 133 |
| MS.gene012466.t1 | AT3G28130 | 30.682 | 264 | 172 | 4 | 94 | 349 | 9 | 269 | 2.75e-36 | 133 |
| MS.gene012466.t1 | AT1G11450 | 31.046 | 306 | 192 | 6 | 9 | 305 | 16 | 311 | 2.93e-36 | 134 |
| MS.gene012466.t1 | AT3G28070 | 31.579 | 285 | 173 | 6 | 68 | 345 | 82 | 351 | 3.11e-36 | 135 |
| MS.gene012466.t1 | AT4G01450 | 31.494 | 308 | 201 | 5 | 1 | 305 | 1 | 301 | 7.57e-36 | 134 |
| MS.gene012466.t1 | AT3G28130 | 29.290 | 338 | 209 | 8 | 28 | 349 | 32 | 355 | 1.88e-35 | 133 |
| MS.gene012466.t1 | AT3G45870 | 30.488 | 328 | 205 | 7 | 11 | 322 | 14 | 334 | 5.77e-35 | 132 |
| MS.gene012466.t1 | AT3G28100 | 33.198 | 247 | 156 | 4 | 94 | 335 | 96 | 338 | 2.34e-34 | 130 |
| MS.gene012466.t1 | AT2G37450 | 31.102 | 254 | 161 | 5 | 99 | 347 | 3 | 247 | 4.57e-34 | 127 |
| MS.gene012466.t1 | AT5G45370 | 27.164 | 335 | 221 | 6 | 25 | 356 | 36 | 350 | 2.27e-33 | 127 |
| MS.gene012466.t1 | AT3G28080 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.63e-33 | 125 |
| MS.gene012466.t1 | AT3G28080 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.63e-33 | 125 |
| MS.gene012466.t1 | AT3G28080 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.63e-33 | 125 |
| MS.gene012466.t1 | AT3G28080 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.63e-33 | 125 |
| MS.gene012466.t1 | AT3G28080 | 30.137 | 292 | 176 | 7 | 57 | 335 | 62 | 338 | 2.78e-33 | 127 |
| MS.gene012466.t1 | AT4G01450 | 32.937 | 252 | 160 | 4 | 1 | 250 | 1 | 245 | 3.31e-33 | 124 |
| MS.gene012466.t1 | AT3G30340 | 32.540 | 252 | 153 | 5 | 11 | 256 | 17 | 257 | 8.52e-33 | 124 |
| MS.gene012466.t1 | AT3G28080 | 30.576 | 278 | 171 | 6 | 65 | 335 | 68 | 330 | 1.34e-32 | 125 |
| MS.gene012466.t1 | AT5G47470 | 28.571 | 357 | 225 | 8 | 11 | 357 | 28 | 364 | 2.15e-32 | 125 |
| MS.gene012466.t1 | AT4G01430 | 33.043 | 230 | 138 | 7 | 140 | 355 | 1 | 228 | 2.24e-32 | 121 |
| MS.gene012466.t1 | AT5G47470 | 28.571 | 357 | 225 | 8 | 11 | 357 | 56 | 392 | 2.70e-32 | 125 |
| MS.gene012466.t1 | AT5G47470 | 29.429 | 333 | 216 | 7 | 11 | 333 | 56 | 379 | 7.04e-32 | 124 |
| MS.gene012466.t1 | AT4G16620 | 30.548 | 347 | 192 | 10 | 34 | 356 | 37 | 358 | 7.49e-32 | 123 |
| MS.gene012466.t1 | AT3G53210 | 31.076 | 251 | 160 | 4 | 11 | 255 | 12 | 255 | 4.41e-31 | 119 |
| MS.gene012466.t1 | AT5G45370 | 26.781 | 351 | 226 | 8 | 25 | 356 | 36 | 374 | 9.38e-31 | 120 |
| MS.gene012466.t1 | AT5G45370 | 26.781 | 351 | 226 | 8 | 25 | 356 | 36 | 374 | 9.38e-31 | 120 |
| MS.gene012466.t1 | AT1G70260 | 26.437 | 348 | 246 | 5 | 23 | 361 | 26 | 372 | 1.40e-30 | 120 |
| MS.gene012466.t1 | AT5G64700 | 28.235 | 255 | 172 | 2 | 9 | 255 | 8 | 259 | 1.87e-30 | 117 |
| MS.gene012466.t1 | AT1G60050 | 26.934 | 349 | 240 | 6 | 9 | 344 | 13 | 359 | 7.00e-30 | 118 |
| MS.gene012466.t1 | AT3G45870 | 29.582 | 311 | 196 | 7 | 11 | 305 | 14 | 317 | 5.85e-29 | 115 |
| MS.gene012466.t1 | AT4G19185 | 28.000 | 325 | 210 | 5 | 25 | 332 | 37 | 354 | 6.84e-29 | 116 |
| MS.gene012466.t1 | AT3G28070 | 31.429 | 245 | 149 | 5 | 68 | 305 | 82 | 314 | 4.14e-28 | 112 |
| MS.gene012466.t1 | AT1G43650 | 32.627 | 236 | 152 | 3 | 11 | 245 | 9 | 238 | 4.87e-28 | 111 |
| MS.gene012466.t1 | AT3G28130 | 28.879 | 232 | 154 | 4 | 126 | 349 | 2 | 230 | 6.08e-27 | 107 |
| MS.gene012466.t1 | AT3G28070 | 30.222 | 225 | 148 | 4 | 126 | 345 | 2 | 222 | 8.91e-27 | 106 |
| MS.gene012466.t1 | AT4G16620 | 31.655 | 278 | 151 | 8 | 99 | 356 | 3 | 261 | 2.07e-26 | 106 |
| MS.gene012466.t1 | AT4G16620 | 31.655 | 278 | 151 | 8 | 99 | 356 | 3 | 261 | 2.07e-26 | 106 |
| MS.gene012466.t1 | AT4G19185 | 28.679 | 265 | 168 | 4 | 85 | 332 | 16 | 276 | 3.41e-26 | 107 |
| MS.gene012466.t1 | AT2G37450 | 29.825 | 228 | 146 | 5 | 125 | 347 | 62 | 280 | 4.20e-26 | 106 |
| MS.gene012466.t1 | AT4G24980 | 28.479 | 309 | 140 | 9 | 23 | 324 | 1 | 235 | 7.02e-26 | 105 |
| MS.gene012466.t1 | AT4G01450 | 31.718 | 227 | 146 | 4 | 1 | 225 | 1 | 220 | 1.99e-25 | 103 |
| MS.gene012466.t1 | AT4G08290 | 30.859 | 256 | 159 | 6 | 9 | 255 | 13 | 259 | 1.92e-24 | 101 |
| MS.gene012466.t1 | AT3G28080 | 29.302 | 215 | 143 | 4 | 126 | 335 | 2 | 212 | 1.23e-23 | 98.2 |
| MS.gene012466.t1 | AT5G45370 | 26.429 | 280 | 178 | 7 | 96 | 356 | 2 | 272 | 7.22e-23 | 97.4 |
| MS.gene012466.t1 | AT5G45370 | 26.429 | 280 | 178 | 7 | 96 | 356 | 2 | 272 | 7.22e-23 | 97.4 |
| MS.gene012466.t1 | AT3G45870 | 29.719 | 249 | 154 | 5 | 11 | 244 | 14 | 256 | 1.50e-21 | 93.6 |
| MS.gene012466.t1 | AT3G28080 | 28.279 | 244 | 114 | 5 | 96 | 335 | 9 | 195 | 9.21e-21 | 90.1 |
| MS.gene012466.t1 | AT3G28080 | 27.835 | 291 | 130 | 8 | 57 | 335 | 62 | 284 | 1.30e-20 | 91.3 |
| MS.gene012466.t1 | AT3G45870 | 28.959 | 221 | 137 | 6 | 118 | 322 | 43 | 259 | 2.68e-18 | 85.1 |
| MS.gene012466.t1 | AT5G45370 | 24.800 | 250 | 160 | 7 | 126 | 356 | 74 | 314 | 1.26e-15 | 77.4 |
| MS.gene012466.t1 | AT4G16620 | 32.105 | 190 | 108 | 4 | 34 | 214 | 37 | 214 | 3.79e-14 | 72.4 |
| MS.gene012466.t1 | AT3G28100 | 32.484 | 157 | 100 | 3 | 94 | 245 | 96 | 251 | 8.13e-14 | 71.2 |
| MS.gene012466.t1 | AT3G28130 | 27.607 | 163 | 114 | 2 | 94 | 252 | 95 | 257 | 8.40e-13 | 68.2 |
| MS.gene012466.t1 | AT3G45870 | 28.061 | 196 | 121 | 6 | 126 | 305 | 51 | 242 | 9.24e-13 | 68.2 |
| MS.gene012466.t1 | AT3G45870 | 28.061 | 196 | 121 | 6 | 126 | 305 | 51 | 242 | 9.24e-13 | 68.2 |
| MS.gene012466.t1 | AT3G28100 | 32.692 | 156 | 97 | 3 | 94 | 245 | 96 | 247 | 5.35e-12 | 65.9 |
| MS.gene012466.t1 | AT3G45870 | 28.161 | 174 | 114 | 5 | 156 | 322 | 14 | 183 | 6.87e-12 | 65.1 |
Find 78 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGCTTCCATAGGATTAA+AGG | 0.170733 | 8.3:-1914575 | MS.gene012466:CDS |
| TTCAGTTTGGTAGGGGCTTT+TGG | 0.178567 | 8.3:-1913276 | MS.gene012466:intron |
| AGAAACGTGGCCAAGATATT+AGG | 0.183960 | 8.3:-1914143 | MS.gene012466:CDS |
| TGGAGATGATACTTGGATTC+TGG | 0.226586 | 8.3:-1914012 | MS.gene012466:CDS |
| CACAAAATGGGTGGTTTAGA+TGG | 0.246334 | 8.3:-1914890 | None:intergenic |
| ATGTTTATGACCTCTCTTAT+TGG | 0.278020 | 8.3:-1914541 | MS.gene012466:CDS |
| TTTAGTCTCATCAAAGTCTT+TGG | 0.286160 | 8.3:+1913215 | None:intergenic |
| ATTCTGACTTATCTGTTAGA+AGG | 0.294692 | 8.3:+1913127 | None:intergenic |
| ACAAGAGCTGCTCTATTAGA+TGG | 0.303700 | 8.3:-1914806 | MS.gene012466:CDS |
| AATCCTATCATAACCATTAC+TGG | 0.316695 | 8.3:+1914860 | None:intergenic |
| ATTCAGTCCTGGTGCATATC+AGG | 0.317727 | 8.3:-1913563 | MS.gene012466:CDS |
| TGTTTATGACCTCTCTTATT+GGG | 0.318007 | 8.3:-1914540 | MS.gene012466:intron |
| AAGAGGAGAATCTTCAAGTA+TGG | 0.355050 | 8.3:-1913753 | MS.gene012466:CDS |
| CAATGTATAACTCTTCTTGT+AGG | 0.355635 | 8.3:+1913468 | None:intergenic |
| AATAAGTAATAGGATAGATT+TGG | 0.374484 | 8.3:-1913157 | MS.gene012466:CDS |
| TCCACTTGCAGTGAGATGTT+TGG | 0.383985 | 8.3:+1914031 | None:intergenic |
| GCAGTGAGATGTTTGGAATC+AGG | 0.387074 | 8.3:+1914038 | None:intergenic |
| GCCGATTTCTTCATCTTGTC+CGG | 0.387323 | 8.3:-1913845 | MS.gene012466:CDS |
| TTTGAGAAATGCCATGGTTA+AGG | 0.391804 | 8.3:+1914097 | None:intergenic |
| GAAACGTGGCCAAGATATTA+GGG | 0.396261 | 8.3:-1914142 | MS.gene012466:CDS |
| AAGGCTTCCATAGGATTAAA+GGG | 0.397333 | 8.3:-1914574 | MS.gene012466:CDS |
| AGGATGATGAAATAAGTAAT+AGG | 0.399706 | 8.3:-1913167 | MS.gene012466:CDS |
| TTTCCAGTAATGGTTATGAT+AGG | 0.400679 | 8.3:-1914863 | MS.gene012466:CDS |
| CTGCAAGTGGAGATGATACT+TGG | 0.425884 | 8.3:-1914019 | MS.gene012466:CDS |
| GGAGATGATACTTGGATTCT+GGG | 0.425968 | 8.3:-1914011 | MS.gene012466:CDS |
| ACATATTGTCCCTAATATCT+TGG | 0.430068 | 8.3:+1914133 | None:intergenic |
| AGAGAAACCCTTTAATCCTA+TGG | 0.436631 | 8.3:+1914567 | None:intergenic |
| TTCTGACTTATCTGTTAGAA+GGG | 0.439173 | 8.3:+1913128 | None:intergenic |
| TTATTTGATGAAAAGATGAT+AGG | 0.443878 | 8.3:+1914725 | None:intergenic |
| AGCTACTGTCATCACAGCTT+TGG | 0.447218 | 8.3:-1913504 | MS.gene012466:CDS |
| TCATCCATTTCAGTTTGGTA+GGG | 0.451556 | 8.3:-1913284 | MS.gene012466:intron |
| CTAGCTTCTTCATTCAGTCC+TGG | 0.455175 | 8.3:-1913574 | MS.gene012466:CDS |
| CAGACAAGGCATAGCCACTT+TGG | 0.464048 | 8.3:-1914756 | MS.gene012466:CDS |
| TTGTAGGAGACAATCTTTCA+AGG | 0.467742 | 8.3:-1914593 | MS.gene012466:intron |
| GGTTGAACATTACACAATAC+AGG | 0.477467 | 8.3:+1913531 | None:intergenic |
| TAGAGCAGCTCTTGTAAAGA+TGG | 0.480325 | 8.3:+1914814 | None:intergenic |
| CATCCATTTCAGTTTGGTAG+GGG | 0.480532 | 8.3:-1913283 | MS.gene012466:intron |
| GTGGTTTGTATATTGTGCTA+TGG | 0.486759 | 8.3:-1913245 | MS.gene012466:CDS |
| TGGTTTGTATATTGTGCTAT+GGG | 0.491355 | 8.3:-1913244 | MS.gene012466:CDS |
| AAAGTCGATAATATATGATC+CGG | 0.500385 | 8.3:+1913826 | None:intergenic |
| CAATCTTTCAAGGCTTCCAT+AGG | 0.504214 | 8.3:-1914583 | MS.gene012466:CDS |
| TCATCCTGCATTTGTGATTG+TGG | 0.514775 | 8.3:+1913183 | None:intergenic |
| TCCGGACAAGATGAAGAAAT+CGG | 0.515636 | 8.3:+1913844 | None:intergenic |
| TTTATTCTATGCTTCTTCTA+CGG | 0.516850 | 8.3:-1914389 | MS.gene012466:CDS |
| ATCATCCATTTCAGTTTGGT+AGG | 0.527344 | 8.3:-1913285 | MS.gene012466:intron |
| TCCAAACATCTCACTGCAAG+TGG | 0.528954 | 8.3:-1914032 | MS.gene012466:CDS |
| GCTACCACAATCACAAATGC+AGG | 0.537389 | 8.3:-1913187 | MS.gene012466:CDS |
| ACAAAATGGGTGGTTTAGAT+GGG | 0.539309 | 8.3:-1914889 | None:intergenic |
| CTACAAGAAGAGTTATACAT+TGG | 0.540322 | 8.3:-1913467 | MS.gene012466:CDS |
| AAACTGCATGAAATTTGTAA+AGG | 0.542858 | 8.3:+1913718 | None:intergenic |
| GCAAATACAAAAGTTAATGC+AGG | 0.549817 | 8.3:+1914340 | None:intergenic |
| AAGAAGAGTTATACATTGGA+AGG | 0.556408 | 8.3:-1913463 | MS.gene012466:intron |
| ATTTCCTTTGAGAAATGCCA+TGG | 0.560886 | 8.3:+1914091 | None:intergenic |
| TGCAGGTATCAAATTACTCA+TGG | 0.563637 | 8.3:+1914357 | None:intergenic |
| TCCTGGTGCATATCAGGAAG+AGG | 0.567080 | 8.3:-1913557 | MS.gene012466:CDS |
| TTAACCATGGCATTTCTCAA+AGG | 0.576574 | 8.3:-1914095 | MS.gene012466:CDS |
| ACCTCTTCCTGATATGCACC+AGG | 0.580892 | 8.3:+1913556 | None:intergenic |
| TATATTTGCACTGATCAAAG+AGG | 0.589339 | 8.3:-1913770 | MS.gene012466:CDS |
| TATCAAATTACTCATGGCAG+TGG | 0.593988 | 8.3:+1914363 | None:intergenic |
| GGGACAATATGTTGTGTCAG+TGG | 0.597289 | 8.3:-1914122 | MS.gene012466:CDS |
| CTGTGATGACAGTAGCTAGA+GGG | 0.598316 | 8.3:+1913510 | None:intergenic |
| GTCTTTGTTGTGTACAGACA+AGG | 0.601849 | 8.3:-1914770 | MS.gene012466:CDS |
| AGGAAATAAGCTGTTACACA+TGG | 0.603802 | 8.3:-1914075 | MS.gene012466:CDS |
| TCTGACTTATCTGTTAGAAG+GGG | 0.613530 | 8.3:+1913129 | None:intergenic |
| TCTTCGAAGTTTAAGAAACG+TGG | 0.637621 | 8.3:-1914156 | MS.gene012466:CDS |
| CTGTACACAACAAAGACTGT+GGG | 0.637823 | 8.3:+1914776 | None:intergenic |
| GATAGGTGCTAATGCCAAAG+TGG | 0.638931 | 8.3:+1914742 | None:intergenic |
| ATATATAGCAGAGAGCAAGA+TGG | 0.639335 | 8.3:-1913106 | MS.gene012466:CDS |
| CAAACTATACCCAATAAGAG+AGG | 0.653594 | 8.3:+1914531 | None:intergenic |
| AAATAAGCTGTTACACATGG+AGG | 0.654397 | 8.3:-1914072 | MS.gene012466:CDS |
| GTCATGTTGGATGATCATGC+AGG | 0.660106 | 8.3:-1913955 | MS.gene012466:intron |
| TCTGTACACAACAAAGACTG+TGG | 0.661023 | 8.3:+1914775 | None:intergenic |
| AGACAACAACACAAAATGGG+TGG | 0.668764 | 8.3:-1914899 | None:intergenic |
| GTTGAACATTACACAATACA+GGG | 0.675633 | 8.3:+1913532 | None:intergenic |
| TGTCAGTGGAGCCTTAACCA+TGG | 0.706104 | 8.3:-1914108 | MS.gene012466:CDS |
| GCTGTGATGACAGTAGCTAG+AGG | 0.719243 | 8.3:+1913509 | None:intergenic |
| TTGAACATTACACAATACAG+GGG | 0.751249 | 8.3:+1913533 | None:intergenic |
| GGTTTGTATATTGTGCTATG+GGG | 0.751530 | 8.3:-1913243 | MS.gene012466:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTTTTTTTTTTTTTTGT+AGG | - | chr8.3:1913373-1913392 | MS.gene012466:intron | 10.0% |
| !! | AATAACTGTATTATTGTGTA+TGG | - | chr8.3:1914657-1914676 | MS.gene012466:intron | 20.0% |
| !! | AATAAGTAATAGGATAGATT+TGG | - | chr8.3:1914825-1914844 | MS.gene012466:CDS | 20.0% |
| !! | ACATAAATGATATATATGAG+TGG | + | chr8.3:1913357-1913376 | None:intergenic | 20.0% |
| !! | ACCTAAAAGATTATTAATTC+TGG | + | chr8.3:1914066-1914085 | None:intergenic | 20.0% |
| !! | TATTAATCATACAACTATAC+AGG | + | chr8.3:1914622-1914641 | None:intergenic | 20.0% |
| !! | TTATTTGATGAAAAGATGAT+AGG | + | chr8.3:1913260-1913279 | None:intergenic | 20.0% |
| !!! | ACCAGAATTAATAATCTTTT+AGG | - | chr8.3:1914062-1914081 | MS.gene012466:CDS | 20.0% |
| !!! | ATCATATATTATCGACTTTT+TGG | - | chr8.3:1914160-1914179 | MS.gene012466:CDS | 20.0% |
| !!! | TTTAAGAGTATTTTTCATGA+CGG | + | chr8.3:1914583-1914602 | None:intergenic | 20.0% |
| ! | AAACTGCATGAAATTTGTAA+AGG | + | chr8.3:1914267-1914286 | None:intergenic | 25.0% |
| ! | AAAGTCGATAATATATGATC+CGG | + | chr8.3:1914159-1914178 | None:intergenic | 25.0% |
| ! | ACAAGATTATTGTTCATCAA+TGG | - | chr8.3:1914087-1914106 | MS.gene012466:CDS | 25.0% |
| ! | ACTCTTAAATCTAACTTTGA+GGG | - | chr8.3:1914594-1914613 | MS.gene012466:intron | 25.0% |
| ! | AGAAGATTAATGAGAGTAAT+TGG | + | chr8.3:1913332-1913351 | None:intergenic | 25.0% |
| ! | AGGATGATGAAATAAGTAAT+AGG | - | chr8.3:1914815-1914834 | MS.gene012466:CDS | 25.0% |
| ! | TACTCTTAAATCTAACTTTG+AGG | - | chr8.3:1914593-1914612 | MS.gene012466:intron | 25.0% |
| ! | TATAATTGGTTATACATGCA+GGG | - | chr8.3:1913539-1913558 | MS.gene012466:CDS | 25.0% |
| ! | TTATAATTGGTTATACATGC+AGG | - | chr8.3:1913538-1913557 | MS.gene012466:CDS | 25.0% |
| ! | TTTATTCTATGCTTCTTCTA+CGG | - | chr8.3:1913593-1913612 | MS.gene012466:CDS | 25.0% |
| ! | TTTGATTAAACTTTCAACAC+AGG | - | chr8.3:1914113-1914132 | MS.gene012466:CDS | 25.0% |
| !! | AACAAAAGCATAAGAATCAA+AGG | + | chr8.3:1913484-1913503 | None:intergenic | 25.0% |
| !! | ACAAATTGAAATGTTTCTGA+GGG | + | chr8.3:1914314-1914333 | None:intergenic | 25.0% |
| !! | TACAAATTGAAATGTTTCTG+AGG | + | chr8.3:1914315-1914334 | None:intergenic | 25.0% |
| !! | TCATCTTTTCATCAAATAAG+CGG | - | chr8.3:1913261-1913280 | MS.gene012466:CDS | 25.0% |
| !! | TTTGTATTTGCAGCAATTTT+GGG | - | chr8.3:1913654-1913673 | MS.gene012466:intron | 25.0% |
| !! | TTTTGTATTTGCAGCAATTT+TGG | - | chr8.3:1913653-1913672 | MS.gene012466:intron | 25.0% |
| !!! | AATCAGAATGCATATTTTAG+TGG | - | chr8.3:1913570-1913589 | MS.gene012466:CDS | 25.0% |
| !!! | CTGTATTTTTTTGTGATACA+GGG | - | chr8.3:1914371-1914390 | MS.gene012466:CDS | 25.0% |
| !!! | TCTGTATTTTTTTGTGATAC+AGG | - | chr8.3:1914370-1914389 | MS.gene012466:CDS | 25.0% |
| AAACAAATACTACTGCAACT+AGG | + | chr8.3:1913741-1913760 | None:intergenic | 30.0% | |
| AAGAAGAGTTATACATTGGA+AGG | - | chr8.3:1914519-1914538 | MS.gene012466:intron | 30.0% | |
| AATCCTATCATAACCATTAC+TGG | + | chr8.3:1913125-1913144 | None:intergenic | 30.0% | |
| ACATATTGTCCCTAATATCT+TGG | + | chr8.3:1913852-1913871 | None:intergenic | 30.0% | |
| ATGTTTATGACCTCTCTTAT+TGG | - | chr8.3:1913441-1913460 | MS.gene012466:intron | 30.0% | |
| ATTCTGACTTATCTGTTAGA+AGG | + | chr8.3:1914858-1914877 | None:intergenic | 30.0% | |
| CAATGTATAACTCTTCTTGT+AGG | + | chr8.3:1914517-1914536 | None:intergenic | 30.0% | |
| CTACAAGAAGAGTTATACAT+TGG | - | chr8.3:1914515-1914534 | MS.gene012466:intron | 30.0% | |
| GCAAATACAAAAGTTAATGC+AGG | + | chr8.3:1913645-1913664 | None:intergenic | 30.0% | |
| GTTGAACATTACACAATACA+GGG | + | chr8.3:1914453-1914472 | None:intergenic | 30.0% | |
| TGTTTATGACCTCTCTTATT+GGG | - | chr8.3:1913442-1913461 | MS.gene012466:intron | 30.0% | |
| TTCTGACTTATCTGTTAGAA+GGG | + | chr8.3:1914857-1914876 | None:intergenic | 30.0% | |
| TTGAACATTACACAATACAG+GGG | + | chr8.3:1914452-1914471 | None:intergenic | 30.0% | |
| TTTAGTCTCATCAAAGTCTT+TGG | + | chr8.3:1914770-1914789 | None:intergenic | 30.0% | |
| TTTCCAGTAATGGTTATGAT+AGG | - | chr8.3:1913119-1913138 | MS.gene012466:CDS | 30.0% | |
| ! | ATGCAATGAATGACATTTTC+TGG | - | chr8.3:1913773-1913792 | MS.gene012466:CDS | 30.0% |
| ! | TATATTTGCACTGATCAAAG+AGG | - | chr8.3:1914212-1914231 | MS.gene012466:intron | 30.0% |
| ! | TGGTTTGTATATTGTGCTAT+GGG | - | chr8.3:1914738-1914757 | MS.gene012466:CDS | 30.0% |
| ! | TTGTATTTGCAGCAATTTTG+GGG | - | chr8.3:1913655-1913674 | MS.gene012466:intron | 30.0% |
| !!! | TCTTAGCAAGTAGTGTTTTT+TGG | - | chr8.3:1914005-1914024 | MS.gene012466:CDS | 30.0% |
| !!! | TTTTTTGTGATACAGGGAAT+TGG | - | chr8.3:1914377-1914396 | MS.gene012466:CDS | 30.0% |
| AAATAAGCTGTTACACATGG+AGG | - | chr8.3:1913910-1913929 | MS.gene012466:intron | 35.0% | |
| AAGAGGAGAATCTTCAAGTA+TGG | - | chr8.3:1914229-1914248 | MS.gene012466:intron | 35.0% | |
| AAGGCTTCCATAGGATTAAA+GGG | - | chr8.3:1913408-1913427 | MS.gene012466:intron | 35.0% | |
| AGAGAAACCCTTTAATCCTA+TGG | + | chr8.3:1913418-1913437 | None:intergenic | 35.0% | |
| AGGAAATAAGCTGTTACACA+TGG | - | chr8.3:1913907-1913926 | MS.gene012466:intron | 35.0% | |
| ATATATAGCAGAGAGCAAGA+TGG | - | chr8.3:1914876-1914895 | MS.gene012466:CDS | 35.0% | |
| ATATGCAGTAAGTCTCTAAC+AGG | - | chr8.3:1914287-1914306 | MS.gene012466:intron | 35.0% | |
| ATCATCCATTTCAGTTTGGT+AGG | - | chr8.3:1914697-1914716 | MS.gene012466:intron | 35.0% | |
| ATGCATCATCCATTTCAGTT+TGG | - | chr8.3:1914693-1914712 | MS.gene012466:intron | 35.0% | |
| CAAACTATACCCAATAAGAG+AGG | + | chr8.3:1913454-1913473 | None:intergenic | 35.0% | |
| GAGAGTAATTGGTTAAGAGA+GGG | + | chr8.3:1913321-1913340 | None:intergenic | 35.0% | |
| GGTTGAACATTACACAATAC+AGG | + | chr8.3:1914454-1914473 | None:intergenic | 35.0% | |
| GGTTTGTATATTGTGCTATG+GGG | - | chr8.3:1914739-1914758 | MS.gene012466:CDS | 35.0% | |
| TATCAAATTACTCATGGCAG+TGG | + | chr8.3:1913622-1913641 | None:intergenic | 35.0% | |
| TCATCCATTTCAGTTTGGTA+GGG | - | chr8.3:1914698-1914717 | MS.gene012466:intron | 35.0% | |
| TCTGACTTATCTGTTAGAAG+GGG | + | chr8.3:1914856-1914875 | None:intergenic | 35.0% | |
| TCTTCGAAGTTTAAGAAACG+TGG | - | chr8.3:1913826-1913845 | MS.gene012466:CDS | 35.0% | |
| TGAGAGTAATTGGTTAAGAG+AGG | + | chr8.3:1913322-1913341 | None:intergenic | 35.0% | |
| TGCAGGTATCAAATTACTCA+TGG | + | chr8.3:1913628-1913647 | None:intergenic | 35.0% | |
| TTAACCATGGCATTTCTCAA+AGG | - | chr8.3:1913887-1913906 | MS.gene012466:intron | 35.0% | |
| TTGTAGGAGACAATCTTTCA+AGG | - | chr8.3:1913389-1913408 | MS.gene012466:intron | 35.0% | |
| TTTGAGAAATGCCATGGTTA+AGG | + | chr8.3:1913888-1913907 | None:intergenic | 35.0% | |
| ! | AGATGGGTATTTTCCAGTAA+TGG | - | chr8.3:1913109-1913128 | MS.gene012466:CDS | 35.0% |
| ! | ATTTCCTTTGAGAAATGCCA+TGG | + | chr8.3:1913894-1913913 | None:intergenic | 35.0% |
| ! | GTGGTTTGTATATTGTGCTA+TGG | - | chr8.3:1914737-1914756 | MS.gene012466:CDS | 35.0% |
| !!! | GTAGTGTTTTTTGGTCATGT+TGG | - | chr8.3:1914014-1914033 | MS.gene012466:CDS | 35.0% |
| ACAAGAGCTGCTCTATTAGA+TGG | - | chr8.3:1913176-1913195 | MS.gene012466:CDS | 40.0% | |
| AGAAACGTGGCCAAGATATT+AGG | - | chr8.3:1913839-1913858 | MS.gene012466:CDS | 40.0% | |
| CAAGGCTTCCATAGGATTAA+AGG | - | chr8.3:1913407-1913426 | MS.gene012466:intron | 40.0% | |
| CAATCTTTCAAGGCTTCCAT+AGG | - | chr8.3:1913399-1913418 | MS.gene012466:intron | 40.0% | |
| CATCCATTTCAGTTTGGTAG+GGG | - | chr8.3:1914699-1914718 | MS.gene012466:intron | 40.0% | |
| CTGTACACAACAAAGACTGT+GGG | + | chr8.3:1913209-1913228 | None:intergenic | 40.0% | |
| GAAACGTGGCCAAGATATTA+GGG | - | chr8.3:1913840-1913859 | MS.gene012466:CDS | 40.0% | |
| GGAGATGATACTTGGATTCT+GGG | - | chr8.3:1913971-1913990 | MS.gene012466:CDS | 40.0% | |
| TAGAGCAGCTCTTGTAAAGA+TGG | + | chr8.3:1913171-1913190 | None:intergenic | 40.0% | |
| TCATCCTGCATTTGTGATTG+TGG | + | chr8.3:1914802-1914821 | None:intergenic | 40.0% | |
| TCCGGACAAGATGAAGAAAT+CGG | + | chr8.3:1914141-1914160 | None:intergenic | 40.0% | |
| TCTGTACACAACAAAGACTG+TGG | + | chr8.3:1913210-1913229 | None:intergenic | 40.0% | |
| TGGAGATGATACTTGGATTC+TGG | - | chr8.3:1913970-1913989 | MS.gene012466:CDS | 40.0% | |
| ! | GTCTTTGTTGTGTACAGACA+AGG | - | chr8.3:1913212-1913231 | MS.gene012466:CDS | 40.0% |
| AAGCCCCTACCAAACTGAAA+TGG | + | chr8.3:1914705-1914724 | None:intergenic | 45.0% | |
| AGCTACTGTCATCACAGCTT+TGG | - | chr8.3:1914478-1914497 | MS.gene012466:intron | 45.0% | |
| ATTCAGTCCTGGTGCATATC+AGG | - | chr8.3:1914419-1914438 | MS.gene012466:CDS | 45.0% | |
| CTAGCTTCTTCATTCAGTCC+TGG | - | chr8.3:1914408-1914427 | MS.gene012466:CDS | 45.0% | |
| CTGCAAGTGGAGATGATACT+TGG | - | chr8.3:1913963-1913982 | MS.gene012466:CDS | 45.0% | |
| CTGTGATGACAGTAGCTAGA+GGG | + | chr8.3:1914475-1914494 | None:intergenic | 45.0% | |
| GATAGGTGCTAATGCCAAAG+TGG | + | chr8.3:1913243-1913262 | None:intergenic | 45.0% | |
| GCTACCACAATCACAAATGC+AGG | - | chr8.3:1914795-1914814 | MS.gene012466:CDS | 45.0% | |
| GGGACAATATGTTGTGTCAG+TGG | - | chr8.3:1913860-1913879 | MS.gene012466:intron | 45.0% | |
| GTCATGTTGGATGATCATGC+AGG | - | chr8.3:1914027-1914046 | MS.gene012466:CDS | 45.0% | |
| TCCAAACATCTCACTGCAAG+TGG | - | chr8.3:1913950-1913969 | MS.gene012466:intron | 45.0% | |
| TCCACTTGCAGTGAGATGTT+TGG | + | chr8.3:1913954-1913973 | None:intergenic | 45.0% | |
| ! | GCAGTGAGATGTTTGGAATC+AGG | + | chr8.3:1913947-1913966 | None:intergenic | 45.0% |
| ! | GCCGATTTCTTCATCTTGTC+CGG | - | chr8.3:1914137-1914156 | MS.gene012466:CDS | 45.0% |
| ! | TTCAGTTTGGTAGGGGCTTT+TGG | - | chr8.3:1914706-1914725 | MS.gene012466:intron | 45.0% |
| !! | ACAAAATAAATAATTATAAT+TGG | - | chr8.3:1913525-1913544 | MS.gene012466:CDS | 5.0% |
| !! | TATTATATATATGATTAATT+TGG | - | chr8.3:1913286-1913305 | MS.gene012466:intron | 5.0% |
| ACCTCTTCCTGATATGCACC+AGG | + | chr8.3:1914429-1914448 | None:intergenic | 50.0% | |
| CAGACAAGGCATAGCCACTT+TGG | - | chr8.3:1913226-1913245 | MS.gene012466:CDS | 50.0% | |
| GATGATGCATGTGAGCGAGT+AGG | + | chr8.3:1914683-1914702 | None:intergenic | 50.0% | |
| GCTGTGATGACAGTAGCTAG+AGG | + | chr8.3:1914476-1914495 | None:intergenic | 50.0% | |
| TCCTGGTGCATATCAGGAAG+AGG | - | chr8.3:1914425-1914444 | MS.gene012466:CDS | 50.0% | |
| TGTCAGTGGAGCCTTAACCA+TGG | - | chr8.3:1913874-1913893 | MS.gene012466:intron | 50.0% | |
| !!! | GGGGCTTTTGGAGTGATAAG+TGG | - | chr8.3:1914718-1914737 | MS.gene012466:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 1913098 | 1914906 | 1913098 | ID=MS.gene012466 |
| chr8.3 | mRNA | 1913098 | 1914906 | 1913098 | ID=MS.gene012466.t1;Parent=MS.gene012466 |
| chr8.3 | exon | 1914722 | 1914906 | 1914722 | ID=MS.gene012466.t1.exon1;Parent=MS.gene012466.t1 |
| chr8.3 | CDS | 1914722 | 1914906 | 1914722 | ID=cds.MS.gene012466.t1;Parent=MS.gene012466.t1 |
| chr8.3 | exon | 1914541 | 1914609 | 1914541 | ID=MS.gene012466.t1.exon2;Parent=MS.gene012466.t1 |
| chr8.3 | CDS | 1914541 | 1914609 | 1914541 | ID=cds.MS.gene012466.t1;Parent=MS.gene012466.t1 |
| chr8.3 | exon | 1914328 | 1914444 | 1914328 | ID=MS.gene012466.t1.exon3;Parent=MS.gene012466.t1 |
| chr8.3 | CDS | 1914328 | 1914444 | 1914328 | ID=cds.MS.gene012466.t1;Parent=MS.gene012466.t1 |
| chr8.3 | exon | 1913956 | 1914193 | 1913956 | ID=MS.gene012466.t1.exon4;Parent=MS.gene012466.t1 |
| chr8.3 | CDS | 1913956 | 1914193 | 1913956 | ID=cds.MS.gene012466.t1;Parent=MS.gene012466.t1 |
| chr8.3 | exon | 1913711 | 1913869 | 1913711 | ID=MS.gene012466.t1.exon5;Parent=MS.gene012466.t1 |
| chr8.3 | CDS | 1913711 | 1913869 | 1913711 | ID=cds.MS.gene012466.t1;Parent=MS.gene012466.t1 |
| chr8.3 | exon | 1913464 | 1913612 | 1913464 | ID=MS.gene012466.t1.exon6;Parent=MS.gene012466.t1 |
| chr8.3 | CDS | 1913464 | 1913612 | 1913464 | ID=cds.MS.gene012466.t1;Parent=MS.gene012466.t1 |
| chr8.3 | exon | 1913098 | 1913293 | 1913098 | ID=MS.gene012466.t1.exon7;Parent=MS.gene012466.t1 |
| chr8.3 | CDS | 1913098 | 1913293 | 1913098 | ID=cds.MS.gene012466.t1;Parent=MS.gene012466.t1 |
| Gene Sequence |
| Protein sequence |
