Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035645.t1 | XP_013458553.1 | 97.3 | 370 | 9 | 1 | 1 | 370 | 1 | 369 | 1.20E-196 | 695.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035645.t1 | Q9SUD5 | 44.4 | 365 | 188 | 5 | 7 | 370 | 6 | 356 | 2.7e-80 | 300.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035645.t1 | A0A072URZ6 | 97.3 | 370 | 9 | 1 | 1 | 370 | 1 | 369 | 8.6e-197 | 695.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene022543 | MS.gene035645 | PPI |
| MS.gene58123 | MS.gene035645 | PPI |
| MS.gene035645 | MS.gene055334 | PPI |
| MS.gene055336 | MS.gene035645 | PPI |
| MS.gene035645 | MS.gene030673 | PPI |
| MS.gene28443 | MS.gene035645 | PPI |
| MS.gene035645 | MS.gene91824 | PPI |
| MS.gene022545 | MS.gene035645 | PPI |
| MS.gene31007 | MS.gene035645 | PPI |
| MS.gene035645 | MS.gene62756 | PPI |
| MS.gene035645 | MS.gene70269 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035645.t1 | MTR_4g129650 | 97.297 | 370 | 9 | 1 | 1 | 370 | 1 | 369 | 0.0 | 734 |
| MS.gene035645.t1 | MTR_4g129650 | 97.338 | 263 | 6 | 1 | 108 | 370 | 1 | 262 | 0.0 | 527 |
| MS.gene035645.t1 | MTR_8g006010 | 49.041 | 365 | 173 | 6 | 1 | 358 | 1 | 359 | 1.60e-114 | 338 |
| MS.gene035645.t1 | MTR_2g065550 | 46.575 | 365 | 182 | 3 | 4 | 356 | 6 | 369 | 4.01e-109 | 324 |
| MS.gene035645.t1 | MTR_8g006120 | 48.541 | 377 | 183 | 6 | 1 | 370 | 1 | 373 | 5.37e-109 | 324 |
| MS.gene035645.t1 | MTR_8g006090 | 48.361 | 366 | 172 | 6 | 2 | 360 | 3 | 358 | 2.28e-105 | 314 |
| MS.gene035645.t1 | MTR_8g006050 | 45.430 | 372 | 155 | 8 | 4 | 360 | 7 | 345 | 7.85e-97 | 292 |
| MS.gene035645.t1 | MTR_8g006090 | 47.588 | 311 | 151 | 5 | 2 | 305 | 3 | 308 | 2.13e-84 | 259 |
| MS.gene035645.t1 | MTR_8g006090 | 50.000 | 286 | 130 | 4 | 80 | 360 | 1 | 278 | 3.88e-83 | 254 |
| MS.gene035645.t1 | MTR_7g111830 | 34.503 | 342 | 200 | 5 | 8 | 334 | 7 | 339 | 3.04e-65 | 212 |
| MS.gene035645.t1 | MTR_1g068630 | 33.435 | 329 | 209 | 5 | 16 | 340 | 23 | 345 | 4.98e-63 | 206 |
| MS.gene035645.t1 | MTR_1g038560 | 34.615 | 338 | 213 | 4 | 10 | 344 | 5 | 337 | 6.72e-63 | 204 |
| MS.gene035645.t1 | MTR_2g016710 | 32.670 | 352 | 219 | 5 | 1 | 339 | 1 | 347 | 1.61e-62 | 204 |
| MS.gene035645.t1 | MTR_8g006090 | 47.244 | 254 | 123 | 4 | 2 | 249 | 3 | 251 | 3.13e-62 | 201 |
| MS.gene035645.t1 | MTR_6g036450 | 34.160 | 363 | 215 | 6 | 4 | 352 | 5 | 357 | 2.08e-61 | 201 |
| MS.gene035645.t1 | MTR_3g112480 | 33.952 | 377 | 216 | 8 | 13 | 363 | 25 | 394 | 2.02e-60 | 200 |
| MS.gene035645.t1 | MTR_1g023180 | 33.069 | 378 | 221 | 7 | 11 | 361 | 24 | 396 | 3.68e-60 | 199 |
| MS.gene035645.t1 | MTR_2g007960 | 31.536 | 371 | 237 | 7 | 3 | 361 | 7 | 372 | 1.10e-59 | 198 |
| MS.gene035645.t1 | MTR_2g027030 | 35.501 | 369 | 216 | 9 | 4 | 361 | 8 | 365 | 1.98e-59 | 196 |
| MS.gene035645.t1 | MTR_6g081840 | 34.503 | 342 | 211 | 5 | 17 | 350 | 19 | 355 | 2.02e-59 | 196 |
| MS.gene035645.t1 | MTR_3g012420 | 36.503 | 326 | 196 | 5 | 13 | 332 | 22 | 342 | 3.08e-59 | 197 |
| MS.gene035645.t1 | MTR_1g114210 | 33.237 | 346 | 208 | 7 | 8 | 344 | 13 | 344 | 4.81e-59 | 195 |
| MS.gene035645.t1 | MTR_1g074120 | 33.526 | 346 | 208 | 6 | 11 | 345 | 19 | 353 | 5.67e-59 | 195 |
| MS.gene035645.t1 | MTR_1g030400 | 31.092 | 357 | 215 | 7 | 17 | 352 | 16 | 362 | 2.93e-58 | 193 |
| MS.gene035645.t1 | MTR_8g041390 | 31.593 | 364 | 235 | 6 | 13 | 369 | 18 | 374 | 3.68e-58 | 194 |
| MS.gene035645.t1 | MTR_2g007990 | 31.467 | 375 | 241 | 6 | 4 | 367 | 11 | 380 | 2.43e-57 | 192 |
| MS.gene035645.t1 | MTR_1g074160 | 33.923 | 339 | 212 | 5 | 11 | 344 | 16 | 347 | 4.62e-57 | 189 |
| MS.gene035645.t1 | MTR_1g070175 | 31.487 | 343 | 222 | 6 | 10 | 350 | 22 | 353 | 2.10e-56 | 188 |
| MS.gene035645.t1 | MTR_7g100050 | 32.958 | 355 | 214 | 9 | 16 | 362 | 21 | 359 | 2.21e-56 | 189 |
| MS.gene035645.t1 | MTR_1g073990 | 33.333 | 336 | 219 | 3 | 11 | 344 | 19 | 351 | 3.93e-56 | 187 |
| MS.gene035645.t1 | MTR_8g092650 | 33.043 | 345 | 212 | 5 | 11 | 346 | 8 | 342 | 2.46e-55 | 185 |
| MS.gene035645.t1 | MTR_3g072530 | 31.700 | 347 | 220 | 8 | 14 | 351 | 20 | 358 | 3.68e-55 | 185 |
| MS.gene035645.t1 | MTR_2g007260 | 35.211 | 355 | 213 | 6 | 3 | 345 | 9 | 358 | 3.70e-55 | 186 |
| MS.gene035645.t1 | MTR_3g095450 | 32.597 | 362 | 228 | 8 | 1 | 354 | 1 | 354 | 4.60e-55 | 185 |
| MS.gene035645.t1 | MTR_1g074070 | 33.140 | 344 | 205 | 8 | 3 | 333 | 11 | 342 | 8.05e-55 | 184 |
| MS.gene035645.t1 | MTR_3g095420 | 30.110 | 362 | 236 | 7 | 1 | 353 | 3 | 356 | 1.76e-54 | 183 |
| MS.gene035645.t1 | MTR_3g095460 | 31.395 | 344 | 224 | 5 | 1 | 338 | 1 | 338 | 2.13e-54 | 182 |
| MS.gene035645.t1 | MTR_2g007970 | 32.908 | 392 | 227 | 10 | 4 | 369 | 8 | 389 | 8.08e-54 | 182 |
| MS.gene035645.t1 | MTR_2g102340 | 32.951 | 349 | 220 | 8 | 4 | 345 | 8 | 349 | 1.03e-53 | 182 |
| MS.gene035645.t1 | MTR_1g051120 | 32.647 | 340 | 219 | 6 | 11 | 344 | 19 | 354 | 1.32e-53 | 181 |
| MS.gene035645.t1 | MTR_3g090550 | 34.286 | 315 | 197 | 5 | 23 | 334 | 21 | 328 | 8.10e-52 | 176 |
| MS.gene035645.t1 | MTR_5g021160 | 32.402 | 358 | 219 | 8 | 16 | 360 | 15 | 362 | 1.11e-51 | 176 |
| MS.gene035645.t1 | MTR_1g074020 | 31.742 | 356 | 213 | 9 | 8 | 353 | 17 | 352 | 2.10e-51 | 175 |
| MS.gene035645.t1 | MTR_3g112480 | 33.548 | 310 | 178 | 6 | 79 | 363 | 33 | 339 | 7.17e-51 | 173 |
| MS.gene035645.t1 | MTR_2g016710 | 32.333 | 300 | 196 | 4 | 11 | 308 | 11 | 305 | 1.36e-50 | 172 |
| MS.gene035645.t1 | MTR_3g072500 | 29.326 | 341 | 226 | 6 | 11 | 343 | 23 | 356 | 3.30e-50 | 173 |
| MS.gene035645.t1 | MTR_1g030580 | 29.799 | 349 | 235 | 5 | 3 | 347 | 11 | 353 | 3.98e-50 | 172 |
| MS.gene035645.t1 | MTR_4g106720 | 33.333 | 315 | 196 | 6 | 33 | 339 | 37 | 345 | 4.34e-50 | 172 |
| MS.gene035645.t1 | MTR_3g072560 | 30.857 | 350 | 228 | 6 | 11 | 354 | 21 | 362 | 6.39e-50 | 172 |
| MS.gene035645.t1 | MTR_4g094340 | 31.476 | 359 | 217 | 9 | 11 | 357 | 12 | 353 | 7.09e-49 | 168 |
| MS.gene035645.t1 | MTR_4g094340 | 31.351 | 370 | 224 | 10 | 1 | 357 | 19 | 371 | 1.18e-48 | 168 |
| MS.gene035645.t1 | MTR_5g034990 | 32.440 | 336 | 211 | 6 | 25 | 359 | 31 | 351 | 3.85e-48 | 166 |
| MS.gene035645.t1 | MTR_0096s0100 | 28.818 | 347 | 242 | 3 | 7 | 351 | 17 | 360 | 5.45e-48 | 166 |
| MS.gene035645.t1 | MTR_8g092650 | 33.457 | 269 | 165 | 3 | 86 | 346 | 2 | 264 | 1.35e-45 | 157 |
| MS.gene035645.t1 | MTR_1g030600 | 29.301 | 372 | 236 | 7 | 11 | 359 | 21 | 388 | 1.38e-45 | 160 |
| MS.gene035645.t1 | MTR_4g094360 | 32.326 | 331 | 212 | 6 | 10 | 333 | 16 | 341 | 5.19e-44 | 157 |
| MS.gene035645.t1 | MTR_3g095440 | 30.495 | 364 | 233 | 8 | 1 | 354 | 1 | 354 | 1.65e-43 | 154 |
| MS.gene035645.t1 | MTR_0103s0090 | 31.268 | 339 | 209 | 7 | 28 | 350 | 31 | 361 | 1.73e-43 | 154 |
| MS.gene035645.t1 | MTR_4g094362 | 31.437 | 334 | 222 | 5 | 10 | 339 | 16 | 346 | 1.77e-43 | 155 |
| MS.gene035645.t1 | MTR_5g025330 | 30.607 | 379 | 231 | 8 | 1 | 362 | 3 | 366 | 2.71e-43 | 158 |
| MS.gene035645.t1 | MTR_6g007743 | 31.672 | 341 | 221 | 7 | 7 | 343 | 11 | 343 | 4.95e-42 | 150 |
| MS.gene035645.t1 | MTR_4g094340 | 33.818 | 275 | 167 | 5 | 90 | 357 | 21 | 287 | 6.81e-42 | 148 |
| MS.gene035645.t1 | MTR_3g072500 | 31.373 | 255 | 165 | 4 | 96 | 343 | 2 | 253 | 7.19e-42 | 148 |
| MS.gene035645.t1 | MTR_5g034910 | 32.537 | 335 | 217 | 6 | 4 | 334 | 3 | 332 | 1.29e-41 | 149 |
| MS.gene035645.t1 | MTR_4g094342 | 30.275 | 327 | 216 | 4 | 4 | 322 | 9 | 331 | 1.42e-41 | 149 |
| MS.gene035645.t1 | MTR_6g007760 | 33.099 | 284 | 181 | 4 | 28 | 307 | 31 | 309 | 2.15e-41 | 147 |
| MS.gene035645.t1 | MTR_5g025290 | 29.863 | 365 | 233 | 6 | 3 | 349 | 6 | 365 | 3.34e-41 | 149 |
| MS.gene035645.t1 | MTR_5g025290 | 29.863 | 365 | 233 | 6 | 3 | 349 | 34 | 393 | 7.72e-41 | 149 |
| MS.gene035645.t1 | MTR_5g089390 | 30.383 | 339 | 222 | 6 | 13 | 349 | 19 | 345 | 1.12e-40 | 147 |
| MS.gene035645.t1 | MTR_8g006090 | 49.425 | 174 | 81 | 2 | 80 | 249 | 1 | 171 | 2.25e-40 | 142 |
| MS.gene035645.t1 | MTR_3g072520 | 28.739 | 341 | 234 | 5 | 11 | 345 | 12 | 349 | 4.37e-40 | 146 |
| MS.gene035645.t1 | MTR_5g021160 | 32.028 | 281 | 171 | 7 | 93 | 360 | 6 | 279 | 4.82e-40 | 143 |
| MS.gene035645.t1 | MTR_4g094352 | 29.971 | 347 | 226 | 4 | 10 | 344 | 14 | 355 | 9.62e-40 | 145 |
| MS.gene035645.t1 | MTR_3g019050 | 29.477 | 363 | 233 | 7 | 13 | 366 | 23 | 371 | 1.45e-39 | 145 |
| MS.gene035645.t1 | MTR_1g014510 | 31.622 | 370 | 224 | 9 | 1 | 350 | 1 | 361 | 2.62e-39 | 145 |
| MS.gene035645.t1 | MTR_0103s0090 | 31.868 | 273 | 165 | 5 | 94 | 350 | 3 | 270 | 4.62e-39 | 140 |
| MS.gene035645.t1 | MTR_6g007750 | 29.700 | 367 | 234 | 10 | 8 | 367 | 12 | 361 | 1.53e-38 | 141 |
| MS.gene035645.t1 | MTR_5g025370 | 29.310 | 348 | 219 | 7 | 25 | 353 | 27 | 366 | 3.84e-38 | 140 |
| MS.gene035645.t1 | MTR_4g094360 | 34.127 | 252 | 157 | 4 | 89 | 333 | 45 | 294 | 3.87e-38 | 140 |
| MS.gene035645.t1 | MTR_5g034930 | 30.380 | 316 | 213 | 5 | 28 | 339 | 26 | 338 | 4.04e-38 | 140 |
| MS.gene035645.t1 | MTR_5g025400 | 28.346 | 381 | 240 | 7 | 1 | 362 | 4 | 370 | 1.13e-37 | 139 |
| MS.gene035645.t1 | MTR_3g112480 | 31.227 | 269 | 157 | 6 | 120 | 363 | 2 | 267 | 1.13e-37 | 136 |
| MS.gene035645.t1 | MTR_5g034980 | 30.065 | 306 | 209 | 4 | 28 | 331 | 27 | 329 | 1.25e-37 | 139 |
| MS.gene035645.t1 | MTR_5g068790 | 28.152 | 341 | 231 | 5 | 13 | 347 | 23 | 355 | 2.09e-37 | 139 |
| MS.gene035645.t1 | MTR_6g007747 | 32.312 | 359 | 224 | 8 | 11 | 367 | 15 | 356 | 5.08e-37 | 137 |
| MS.gene035645.t1 | MTR_6g007740 | 30.499 | 341 | 215 | 7 | 7 | 339 | 11 | 337 | 4.55e-36 | 137 |
| MS.gene035645.t1 | MTR_5g069040 | 26.870 | 361 | 249 | 6 | 13 | 366 | 23 | 375 | 8.65e-36 | 134 |
| MS.gene035645.t1 | MTR_5g025340 | 29.063 | 320 | 206 | 5 | 25 | 327 | 27 | 342 | 1.09e-35 | 134 |
| MS.gene035645.t1 | MTR_4g094360 | 31.023 | 303 | 197 | 6 | 10 | 305 | 16 | 313 | 3.65e-34 | 128 |
| MS.gene035645.t1 | MTR_1g074160 | 33.333 | 231 | 144 | 3 | 11 | 238 | 16 | 239 | 2.51e-33 | 125 |
| MS.gene035645.t1 | MTR_6g007757 | 29.830 | 352 | 229 | 8 | 21 | 369 | 26 | 362 | 5.07e-33 | 126 |
| MS.gene035645.t1 | MTR_6g007753 | 29.141 | 326 | 210 | 7 | 47 | 367 | 333 | 642 | 4.51e-32 | 127 |
| MS.gene035645.t1 | MTR_6g007753 | 28.235 | 255 | 167 | 5 | 116 | 367 | 77 | 318 | 2.24e-22 | 99.0 |
| MS.gene035645.t1 | MTR_8g072350 | 28.701 | 331 | 213 | 6 | 25 | 337 | 26 | 351 | 1.74e-31 | 122 |
| MS.gene035645.t1 | MTR_5g034970 | 28.614 | 332 | 219 | 5 | 5 | 334 | 4 | 319 | 3.01e-30 | 118 |
| MS.gene035645.t1 | MTR_3g095440 | 30.682 | 264 | 166 | 5 | 1 | 255 | 1 | 256 | 6.58e-30 | 115 |
| MS.gene035645.t1 | MTR_2g102340 | 31.461 | 267 | 171 | 6 | 4 | 265 | 34 | 293 | 8.19e-30 | 117 |
| MS.gene035645.t1 | MTR_5g012650 | 28.954 | 373 | 223 | 10 | 1 | 356 | 1 | 348 | 3.21e-29 | 116 |
| MS.gene035645.t1 | MTR_5g021160 | 32.794 | 247 | 154 | 4 | 16 | 256 | 15 | 255 | 1.56e-28 | 112 |
| MS.gene035645.t1 | MTR_3g072500 | 28.452 | 239 | 161 | 4 | 11 | 244 | 23 | 256 | 3.55e-27 | 108 |
| MS.gene035645.t1 | MTR_3g072530 | 34.184 | 196 | 115 | 6 | 14 | 203 | 20 | 207 | 1.02e-26 | 108 |
| MS.gene035645.t1 | MTR_4g100840 | 28.691 | 359 | 217 | 11 | 13 | 357 | 19 | 352 | 2.61e-26 | 108 |
| MS.gene035645.t1 | MTR_4g094340 | 29.457 | 258 | 167 | 5 | 1 | 250 | 1 | 251 | 9.75e-26 | 104 |
| MS.gene035645.t1 | MTR_4g094340 | 29.457 | 258 | 167 | 5 | 1 | 250 | 19 | 269 | 1.28e-25 | 105 |
| MS.gene035645.t1 | MTR_1g052205 | 26.122 | 245 | 158 | 6 | 125 | 353 | 14 | 251 | 1.14e-22 | 95.9 |
| MS.gene035645.t1 | MTR_1g051120 | 30.457 | 197 | 133 | 2 | 11 | 206 | 19 | 212 | 1.40e-21 | 92.0 |
| MS.gene035645.t1 | MTR_3g072500 | 28.571 | 203 | 135 | 4 | 11 | 208 | 23 | 220 | 2.07e-21 | 91.7 |
| MS.gene035645.t1 | MTR_1g051120 | 29.897 | 194 | 132 | 2 | 11 | 203 | 19 | 209 | 1.45e-20 | 90.5 |
| MS.gene035645.t1 | MTR_6g007757 | 29.204 | 226 | 151 | 4 | 21 | 244 | 26 | 244 | 3.03e-20 | 89.7 |
| MS.gene035645.t1 | MTR_4g094340 | 29.245 | 212 | 135 | 5 | 1 | 204 | 19 | 223 | 9.81e-20 | 87.4 |
| MS.gene035645.t1 | MTR_5g034980 | 28.767 | 219 | 152 | 3 | 28 | 245 | 27 | 242 | 9.18e-19 | 86.3 |
| MS.gene035645.t1 | MTR_4g094342 | 27.358 | 212 | 145 | 2 | 4 | 209 | 9 | 217 | 2.10e-15 | 75.9 |
| MS.gene035645.t1 | MTR_1g014790 | 35.965 | 114 | 70 | 1 | 94 | 204 | 46 | 159 | 9.42e-14 | 69.7 |
| MS.gene035645.t1 | MTR_4g094348 | 32.374 | 139 | 79 | 4 | 91 | 218 | 2 | 136 | 2.78e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035645.t1 | AT4G30420 | 43.968 | 373 | 194 | 6 | 1 | 360 | 1 | 371 | 1.34e-107 | 321 |
| MS.gene035645.t1 | AT4G28040 | 44.022 | 368 | 191 | 5 | 4 | 370 | 3 | 356 | 5.44e-106 | 316 |
| MS.gene035645.t1 | AT4G28040 | 44.022 | 368 | 191 | 5 | 4 | 370 | 3 | 356 | 5.44e-106 | 316 |
| MS.gene035645.t1 | AT4G28040 | 44.022 | 368 | 191 | 5 | 4 | 370 | 3 | 356 | 5.44e-106 | 316 |
| MS.gene035645.t1 | AT4G28040 | 44.022 | 368 | 191 | 5 | 4 | 370 | 3 | 356 | 5.44e-106 | 316 |
| MS.gene035645.t1 | AT4G28040 | 44.022 | 368 | 191 | 5 | 4 | 370 | 3 | 356 | 5.44e-106 | 316 |
| MS.gene035645.t1 | AT4G30420 | 43.956 | 364 | 189 | 6 | 11 | 361 | 1 | 362 | 1.02e-104 | 313 |
| MS.gene035645.t1 | AT1G75500 | 35.976 | 328 | 194 | 5 | 11 | 327 | 22 | 344 | 3.04e-62 | 204 |
| MS.gene035645.t1 | AT1G75500 | 35.976 | 328 | 194 | 5 | 11 | 327 | 22 | 344 | 3.04e-62 | 204 |
| MS.gene035645.t1 | AT1G09380 | 35.913 | 323 | 198 | 3 | 8 | 324 | 7 | 326 | 4.98e-62 | 203 |
| MS.gene035645.t1 | AT3G18200 | 35.278 | 360 | 210 | 8 | 10 | 361 | 36 | 380 | 3.58e-59 | 196 |
| MS.gene035645.t1 | AT2G37460 | 31.680 | 363 | 224 | 9 | 13 | 361 | 19 | 371 | 1.74e-56 | 189 |
| MS.gene035645.t1 | AT3G30340 | 35.135 | 333 | 196 | 7 | 11 | 334 | 17 | 338 | 2.38e-55 | 186 |
| MS.gene035645.t1 | AT4G01440 | 33.333 | 342 | 217 | 6 | 1 | 336 | 1 | 337 | 1.63e-54 | 184 |
| MS.gene035645.t1 | AT5G64700 | 31.356 | 354 | 228 | 4 | 7 | 351 | 9 | 356 | 2.57e-53 | 180 |
| MS.gene035645.t1 | AT5G07050 | 32.203 | 354 | 213 | 7 | 13 | 347 | 22 | 367 | 4.67e-53 | 181 |
| MS.gene035645.t1 | AT5G13670 | 28.809 | 361 | 235 | 6 | 16 | 366 | 15 | 363 | 1.17e-52 | 179 |
| MS.gene035645.t1 | AT1G21890 | 29.891 | 368 | 228 | 6 | 1 | 355 | 6 | 356 | 1.75e-52 | 179 |
| MS.gene035645.t1 | AT2G39510 | 31.778 | 343 | 215 | 8 | 11 | 341 | 10 | 345 | 8.46e-52 | 177 |
| MS.gene035645.t1 | AT1G43650 | 32.258 | 341 | 221 | 5 | 11 | 349 | 9 | 341 | 6.38e-51 | 174 |
| MS.gene035645.t1 | AT4G08300 | 30.056 | 356 | 229 | 7 | 2 | 347 | 4 | 349 | 2.73e-50 | 172 |
| MS.gene035645.t1 | AT3G53210 | 31.714 | 350 | 223 | 6 | 11 | 353 | 12 | 352 | 6.54e-49 | 169 |
| MS.gene035645.t1 | AT5G40240 | 35.714 | 308 | 184 | 7 | 28 | 327 | 39 | 340 | 9.13e-49 | 169 |
| MS.gene035645.t1 | AT5G40240 | 35.714 | 308 | 184 | 7 | 28 | 327 | 39 | 340 | 9.13e-49 | 169 |
| MS.gene035645.t1 | AT2G40900 | 30.183 | 328 | 213 | 6 | 13 | 334 | 15 | 332 | 1.66e-48 | 169 |
| MS.gene035645.t1 | AT5G40230 | 35.224 | 335 | 188 | 8 | 28 | 343 | 40 | 364 | 2.00e-48 | 168 |
| MS.gene035645.t1 | AT5G40240 | 35.714 | 308 | 184 | 7 | 28 | 327 | 53 | 354 | 2.07e-48 | 168 |
| MS.gene035645.t1 | AT4G01430 | 32.653 | 343 | 211 | 10 | 28 | 355 | 28 | 365 | 5.38e-48 | 166 |
| MS.gene035645.t1 | AT1G11460 | 33.333 | 324 | 208 | 5 | 10 | 329 | 17 | 336 | 1.53e-47 | 164 |
| MS.gene035645.t1 | AT1G44800 | 29.014 | 355 | 239 | 5 | 2 | 350 | 4 | 351 | 5.99e-47 | 164 |
| MS.gene035645.t1 | AT4G01440 | 31.949 | 313 | 203 | 5 | 1 | 308 | 1 | 308 | 7.94e-47 | 162 |
| MS.gene035645.t1 | AT4G08290 | 30.000 | 360 | 236 | 8 | 11 | 361 | 15 | 367 | 2.50e-46 | 162 |
| MS.gene035645.t1 | AT1G11450 | 31.672 | 341 | 220 | 5 | 10 | 344 | 17 | 350 | 2.65e-46 | 162 |
| MS.gene035645.t1 | AT1G11450 | 33.119 | 311 | 189 | 6 | 43 | 344 | 6 | 306 | 1.64e-45 | 158 |
| MS.gene035645.t1 | AT1G11450 | 35.294 | 272 | 166 | 4 | 79 | 344 | 32 | 299 | 5.31e-44 | 154 |
| MS.gene035645.t1 | AT1G01070 | 29.275 | 345 | 234 | 5 | 4 | 344 | 11 | 349 | 6.57e-43 | 153 |
| MS.gene035645.t1 | AT1G68170 | 31.304 | 345 | 224 | 5 | 10 | 348 | 4 | 341 | 8.53e-43 | 152 |
| MS.gene035645.t1 | AT1G68170 | 31.304 | 345 | 224 | 5 | 10 | 348 | 14 | 351 | 1.12e-42 | 152 |
| MS.gene035645.t1 | AT2G37450 | 29.261 | 352 | 211 | 7 | 1 | 347 | 1 | 319 | 1.92e-42 | 151 |
| MS.gene035645.t1 | AT3G56620 | 28.435 | 313 | 217 | 4 | 13 | 324 | 15 | 321 | 2.09e-42 | 152 |
| MS.gene035645.t1 | AT1G11450 | 35.632 | 261 | 158 | 4 | 90 | 344 | 2 | 258 | 4.45e-42 | 148 |
| MS.gene035645.t1 | AT1G21890 | 30.408 | 319 | 199 | 6 | 1 | 305 | 6 | 315 | 5.82e-41 | 147 |
| MS.gene035645.t1 | AT3G28050 | 29.683 | 347 | 226 | 7 | 28 | 369 | 31 | 364 | 1.72e-40 | 147 |
| MS.gene035645.t1 | AT4G01440 | 34.632 | 231 | 144 | 4 | 111 | 336 | 1 | 229 | 2.20e-40 | 143 |
| MS.gene035645.t1 | AT4G01440 | 34.632 | 231 | 144 | 4 | 111 | 336 | 1 | 229 | 2.20e-40 | 143 |
| MS.gene035645.t1 | AT3G53210 | 32.117 | 274 | 175 | 4 | 86 | 353 | 27 | 295 | 2.69e-40 | 145 |
| MS.gene035645.t1 | AT1G01070 | 32.222 | 270 | 176 | 4 | 79 | 344 | 36 | 302 | 1.09e-39 | 143 |
| MS.gene035645.t1 | AT3G18200 | 35.115 | 262 | 150 | 7 | 108 | 361 | 1 | 250 | 2.61e-39 | 140 |
| MS.gene035645.t1 | AT4G15540 | 33.837 | 331 | 193 | 7 | 24 | 343 | 32 | 347 | 8.63e-39 | 142 |
| MS.gene035645.t1 | AT4G15540 | 33.837 | 331 | 193 | 7 | 24 | 343 | 32 | 347 | 8.63e-39 | 142 |
| MS.gene035645.t1 | AT4G01450 | 31.871 | 342 | 222 | 6 | 1 | 338 | 1 | 335 | 1.02e-37 | 139 |
| MS.gene035645.t1 | AT5G40210 | 31.193 | 327 | 199 | 6 | 5 | 327 | 10 | 314 | 1.24e-37 | 138 |
| MS.gene035645.t1 | AT4G01440 | 33.077 | 260 | 165 | 4 | 1 | 256 | 1 | 255 | 2.64e-37 | 135 |
| MS.gene035645.t1 | AT1G25270 | 27.299 | 348 | 242 | 6 | 9 | 351 | 3 | 344 | 5.69e-37 | 137 |
| MS.gene035645.t1 | AT4G01430 | 32.753 | 287 | 180 | 8 | 27 | 305 | 27 | 308 | 8.57e-37 | 135 |
| MS.gene035645.t1 | AT3G28070 | 31.518 | 257 | 167 | 4 | 94 | 345 | 7 | 259 | 2.49e-36 | 133 |
| MS.gene035645.t1 | AT3G28130 | 30.682 | 264 | 172 | 4 | 94 | 349 | 9 | 269 | 3.92e-36 | 132 |
| MS.gene035645.t1 | AT3G28130 | 30.682 | 264 | 172 | 4 | 94 | 349 | 9 | 269 | 3.92e-36 | 132 |
| MS.gene035645.t1 | AT3G45870 | 30.793 | 328 | 204 | 7 | 11 | 322 | 14 | 334 | 1.48e-35 | 134 |
| MS.gene035645.t1 | AT3G28070 | 31.518 | 257 | 167 | 4 | 94 | 345 | 99 | 351 | 1.67e-35 | 133 |
| MS.gene035645.t1 | AT3G28130 | 30.682 | 264 | 172 | 4 | 94 | 349 | 95 | 355 | 2.04e-35 | 133 |
| MS.gene035645.t1 | AT1G11450 | 31.148 | 305 | 191 | 6 | 10 | 305 | 17 | 311 | 5.79e-35 | 130 |
| MS.gene035645.t1 | AT4G01450 | 30.844 | 308 | 203 | 5 | 1 | 305 | 1 | 301 | 2.79e-34 | 129 |
| MS.gene035645.t1 | AT3G28100 | 32.794 | 247 | 157 | 4 | 94 | 335 | 96 | 338 | 4.34e-34 | 129 |
| MS.gene035645.t1 | AT2G37450 | 30.709 | 254 | 162 | 5 | 99 | 347 | 3 | 247 | 6.79e-34 | 126 |
| MS.gene035645.t1 | AT5G45370 | 26.866 | 335 | 222 | 6 | 25 | 356 | 36 | 350 | 1.19e-33 | 128 |
| MS.gene035645.t1 | AT5G47470 | 28.852 | 357 | 224 | 8 | 11 | 357 | 28 | 364 | 2.94e-33 | 127 |
| MS.gene035645.t1 | AT5G47470 | 28.852 | 357 | 224 | 8 | 11 | 357 | 56 | 392 | 4.04e-33 | 127 |
| MS.gene035645.t1 | AT3G28080 | 30.612 | 245 | 161 | 4 | 96 | 335 | 9 | 249 | 4.37e-33 | 124 |
| MS.gene035645.t1 | AT3G28080 | 30.612 | 245 | 161 | 4 | 96 | 335 | 9 | 249 | 4.37e-33 | 124 |
| MS.gene035645.t1 | AT3G28080 | 30.612 | 245 | 161 | 4 | 96 | 335 | 9 | 249 | 4.37e-33 | 124 |
| MS.gene035645.t1 | AT3G28080 | 30.612 | 245 | 161 | 4 | 96 | 335 | 9 | 249 | 4.37e-33 | 124 |
| MS.gene035645.t1 | AT5G47470 | 29.819 | 332 | 214 | 7 | 11 | 332 | 56 | 378 | 1.07e-32 | 126 |
| MS.gene035645.t1 | AT3G30340 | 32.143 | 252 | 154 | 5 | 11 | 256 | 17 | 257 | 1.21e-32 | 124 |
| MS.gene035645.t1 | AT4G01430 | 33.043 | 230 | 138 | 7 | 140 | 355 | 1 | 228 | 2.17e-32 | 121 |
| MS.gene035645.t1 | AT3G28080 | 29.452 | 292 | 178 | 7 | 57 | 335 | 62 | 338 | 2.26e-32 | 125 |
| MS.gene035645.t1 | AT3G28080 | 30.612 | 245 | 161 | 4 | 96 | 335 | 90 | 330 | 2.65e-32 | 124 |
| MS.gene035645.t1 | AT4G01450 | 32.143 | 252 | 162 | 4 | 1 | 250 | 1 | 245 | 1.27e-31 | 120 |
| MS.gene035645.t1 | AT4G16620 | 30.029 | 343 | 199 | 9 | 34 | 356 | 37 | 358 | 1.73e-31 | 122 |
| MS.gene035645.t1 | AT5G64700 | 29.183 | 257 | 168 | 3 | 7 | 255 | 9 | 259 | 3.62e-31 | 119 |
| MS.gene035645.t1 | AT5G45370 | 26.087 | 368 | 236 | 9 | 8 | 356 | 24 | 374 | 4.40e-31 | 122 |
| MS.gene035645.t1 | AT5G45370 | 26.087 | 368 | 236 | 9 | 8 | 356 | 24 | 374 | 4.40e-31 | 122 |
| MS.gene035645.t1 | AT3G53210 | 30.677 | 251 | 161 | 4 | 11 | 255 | 12 | 255 | 5.20e-31 | 119 |
| MS.gene035645.t1 | AT1G70260 | 26.437 | 348 | 246 | 5 | 23 | 361 | 26 | 372 | 5.74e-31 | 121 |
| MS.gene035645.t1 | AT1G60050 | 27.761 | 335 | 227 | 6 | 23 | 344 | 27 | 359 | 1.17e-30 | 120 |
| MS.gene035645.t1 | AT3G45870 | 29.904 | 311 | 195 | 7 | 11 | 305 | 14 | 317 | 1.07e-29 | 117 |
| MS.gene035645.t1 | AT4G19185 | 27.692 | 325 | 211 | 5 | 25 | 332 | 37 | 354 | 5.94e-29 | 116 |
| MS.gene035645.t1 | AT1G43650 | 31.780 | 236 | 154 | 3 | 11 | 245 | 9 | 238 | 6.22e-28 | 110 |
| MS.gene035645.t1 | AT3G28070 | 31.336 | 217 | 143 | 3 | 94 | 305 | 99 | 314 | 1.71e-27 | 110 |
| MS.gene035645.t1 | AT3G28130 | 28.879 | 232 | 154 | 4 | 126 | 349 | 2 | 230 | 9.95e-27 | 106 |
| MS.gene035645.t1 | AT3G28070 | 29.778 | 225 | 149 | 4 | 126 | 345 | 2 | 222 | 1.40e-26 | 106 |
| MS.gene035645.t1 | AT4G16620 | 31.295 | 278 | 152 | 8 | 99 | 356 | 3 | 261 | 2.59e-26 | 106 |
| MS.gene035645.t1 | AT4G16620 | 31.295 | 278 | 152 | 8 | 99 | 356 | 3 | 261 | 2.59e-26 | 106 |
| MS.gene035645.t1 | AT2G37450 | 29.386 | 228 | 147 | 5 | 125 | 347 | 62 | 280 | 4.79e-26 | 106 |
| MS.gene035645.t1 | AT4G19185 | 28.302 | 265 | 169 | 4 | 85 | 332 | 16 | 276 | 5.93e-26 | 106 |
| MS.gene035645.t1 | AT4G24980 | 27.832 | 309 | 142 | 9 | 23 | 324 | 1 | 235 | 1.55e-25 | 104 |
| MS.gene035645.t1 | AT4G01450 | 30.837 | 227 | 148 | 4 | 1 | 225 | 1 | 220 | 5.84e-24 | 99.4 |
| MS.gene035645.t1 | AT3G28080 | 28.837 | 215 | 144 | 4 | 126 | 335 | 2 | 212 | 2.13e-23 | 97.8 |
| MS.gene035645.t1 | AT4G08290 | 29.921 | 254 | 160 | 6 | 11 | 255 | 15 | 259 | 4.26e-23 | 97.8 |
| MS.gene035645.t1 | AT5G45370 | 26.071 | 280 | 179 | 7 | 96 | 356 | 2 | 272 | 9.74e-23 | 97.1 |
| MS.gene035645.t1 | AT5G45370 | 26.071 | 280 | 179 | 7 | 96 | 356 | 2 | 272 | 9.74e-23 | 97.1 |
| MS.gene035645.t1 | AT3G45870 | 30.120 | 249 | 153 | 5 | 11 | 244 | 14 | 256 | 3.25e-22 | 95.5 |
| MS.gene035645.t1 | AT3G28080 | 27.869 | 244 | 115 | 5 | 96 | 335 | 9 | 195 | 1.36e-20 | 89.4 |
| MS.gene035645.t1 | AT3G28080 | 27.869 | 244 | 115 | 5 | 96 | 335 | 98 | 284 | 8.04e-20 | 89.4 |
| MS.gene035645.t1 | AT3G45870 | 28.959 | 221 | 137 | 6 | 118 | 322 | 43 | 259 | 1.93e-18 | 85.5 |
| MS.gene035645.t1 | AT5G45370 | 24.400 | 250 | 161 | 7 | 126 | 356 | 74 | 314 | 1.55e-15 | 77.0 |
| MS.gene035645.t1 | AT4G16620 | 31.183 | 186 | 115 | 3 | 34 | 214 | 37 | 214 | 7.95e-14 | 71.2 |
| MS.gene035645.t1 | AT3G28100 | 31.847 | 157 | 101 | 3 | 94 | 245 | 96 | 251 | 1.20e-13 | 70.9 |
| MS.gene035645.t1 | AT3G45870 | 28.061 | 196 | 121 | 6 | 126 | 305 | 51 | 242 | 6.51e-13 | 68.6 |
| MS.gene035645.t1 | AT3G45870 | 28.061 | 196 | 121 | 6 | 126 | 305 | 51 | 242 | 6.51e-13 | 68.6 |
| MS.gene035645.t1 | AT3G28130 | 27.607 | 163 | 114 | 2 | 94 | 252 | 95 | 257 | 1.02e-12 | 68.2 |
| MS.gene035645.t1 | AT3G28100 | 32.051 | 156 | 98 | 3 | 94 | 245 | 96 | 247 | 7.80e-12 | 65.5 |
| MS.gene035645.t1 | AT3G45870 | 28.161 | 174 | 114 | 5 | 156 | 322 | 14 | 183 | 9.04e-12 | 64.7 |
Find 75 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTTTGGTAGGGGCTTT+TGG | 0.178567 | 8.1:-3375716 | MS.gene035645:intron |
| AGAAACGTGGCAAAGATATT+AGG | 0.189542 | 8.1:-3376608 | MS.gene035645:CDS |
| ATGTTTATGACCTCTCTTAT+TGG | 0.223884 | 8.1:-3377006 | MS.gene035645:CDS |
| TGGAGATGATACTTGGATTC+TGG | 0.226586 | 8.1:-3376477 | MS.gene035645:CDS |
| TTTAGTCTCATCAAAGTCTT+TGG | 0.286160 | 8.1:+3375655 | None:intergenic |
| ATTCTGACTTATCTGTTAGA+AGG | 0.294692 | 8.1:+3375567 | None:intergenic |
| ACAAGAGCTGCTCTATTAGA+TGG | 0.303700 | 8.1:-3377267 | MS.gene035645:CDS |
| ATTCAGTCCTGGTGCATATC+AGG | 0.317727 | 8.1:-3376003 | MS.gene035645:CDS |
| TGTTTATGACCTCTCTTATT+GGG | 0.323265 | 8.1:-3377005 | MS.gene035645:intron |
| CACAAAATGGGTGGTTTAGA+TGG | 0.327452 | 8.1:-3377351 | None:intergenic |
| AAGAGGAGAATCTTCAAGTA+TGG | 0.355050 | 8.1:-3376193 | MS.gene035645:CDS |
| CAATGTATAACTCTTCTTGT+AGG | 0.355635 | 8.1:+3375908 | None:intergenic |
| TTTGTATTTGCAGCAATCTT+GGG | 0.356280 | 8.1:-3376793 | MS.gene035645:CDS |
| GGGACAATTTGTTGTGTTAG+TGG | 0.365542 | 8.1:-3376587 | MS.gene035645:CDS |
| CTTACAGTAATGGTTATGAT+AGG | 0.367931 | 8.1:-3377324 | MS.gene035645:CDS |
| AATAAGTAATAGGATAGATT+TGG | 0.374484 | 8.1:-3375597 | MS.gene035645:CDS |
| TCCACTTGCAGTGAGATGTT+TGG | 0.383985 | 8.1:+3376496 | None:intergenic |
| GCAGTGAGATGTTTGGAATC+AGG | 0.387074 | 8.1:+3376503 | None:intergenic |
| GCCGATTTCTTCATCTTGTC+CGG | 0.387323 | 8.1:-3376285 | MS.gene035645:CDS |
| TTTGAGAAATGCCATGGTTA+AGG | 0.391804 | 8.1:+3376562 | None:intergenic |
| AGGATGATGAAATAAGTAAT+AGG | 0.399706 | 8.1:-3375607 | MS.gene035645:CDS |
| CCACAGTCTTTGTTGTGTAT+AGG | 0.403014 | 8.1:-3377236 | MS.gene035645:CDS |
| GAAACGTGGCAAAGATATTA+GGG | 0.403244 | 8.1:-3376607 | MS.gene035645:CDS |
| CTGCAAGTGGAGATGATACT+TGG | 0.425884 | 8.1:-3376484 | MS.gene035645:CDS |
| GGAGATGATACTTGGATTCT+GGG | 0.425968 | 8.1:-3376476 | MS.gene035645:CDS |
| TTCTGACTTATCTGTTAGAA+GGG | 0.439173 | 8.1:+3375568 | None:intergenic |
| TTATTTGATGAAAAGATGAT+AGG | 0.443878 | 8.1:+3377186 | None:intergenic |
| AGCTACTGTCATCACAGCTT+TGG | 0.447218 | 8.1:-3375944 | MS.gene035645:CDS |
| TCATCCATTTCAGTTTGGTA+GGG | 0.451556 | 8.1:-3375724 | MS.gene035645:intron |
| CTAGCTTCTTCATTCAGTCC+TGG | 0.455175 | 8.1:-3376014 | MS.gene035645:CDS |
| GGTTGAACATTACACAATAC+AGG | 0.477467 | 8.1:+3375971 | None:intergenic |
| AGGCATAGCCACTTTGGCAT+TGG | 0.478172 | 8.1:-3377211 | MS.gene035645:CDS |
| TAGAGCAGCTCTTGTAAAGA+TGG | 0.480325 | 8.1:+3377275 | None:intergenic |
| CATCCATTTCAGTTTGGTAG+GGG | 0.480532 | 8.1:-3375723 | MS.gene035645:intron |
| GTGGTTTGTATATTGTGCTA+TGG | 0.486759 | 8.1:-3375685 | MS.gene035645:CDS |
| AGATGGTTATCTTACAGTAA+TGG | 0.489887 | 8.1:-3377334 | MS.gene035645:CDS |
| TGGTTTGTATATTGTGCTAT+GGG | 0.491355 | 8.1:-3375684 | MS.gene035645:CDS |
| AAAGTCGATAATATATGATC+CGG | 0.500385 | 8.1:+3376266 | None:intergenic |
| TAGGCAAGGCATAGCCACTT+TGG | 0.512689 | 8.1:-3377217 | MS.gene035645:CDS |
| TCATCCTGCATTTGTGATTG+TGG | 0.514775 | 8.1:+3375623 | None:intergenic |
| TCCGGACAAGATGAAGAAAT+CGG | 0.515636 | 8.1:+3376284 | None:intergenic |
| TTTATTCTATGCTTCTTCTA+CGG | 0.516850 | 8.1:-3376854 | MS.gene035645:CDS |
| ATCATCCATTTCAGTTTGGT+AGG | 0.527344 | 8.1:-3375725 | MS.gene035645:intron |
| GTCTTTGTTGTGTATAGGCA+AGG | 0.528821 | 8.1:-3377231 | MS.gene035645:CDS |
| TCCAAACATCTCACTGCAAG+TGG | 0.528954 | 8.1:-3376497 | MS.gene035645:CDS |
| GCTACCACAATCACAAATGC+AGG | 0.537389 | 8.1:-3375627 | MS.gene035645:CDS |
| CTACAAGAAGAGTTATACAT+TGG | 0.540322 | 8.1:-3375907 | MS.gene035645:CDS |
| AAACTGCATGAAATTTGTAA+AGG | 0.542858 | 8.1:+3376158 | None:intergenic |
| GCAAATACAAAAGTTAATGC+AGG | 0.549817 | 8.1:+3376805 | None:intergenic |
| AAGAAGAGTTATACATTGGA+AGG | 0.556408 | 8.1:-3375903 | MS.gene035645:intron |
| ATTTCCTTTGAGAAATGCCA+TGG | 0.560886 | 8.1:+3376556 | None:intergenic |
| TGCAGGTATCAAATTACTCA+TGG | 0.563637 | 8.1:+3376822 | None:intergenic |
| TCCTGGTGCATATCAGGAAG+AGG | 0.567080 | 8.1:-3375997 | MS.gene035645:CDS |
| TTGTATTTGCAGCAATCTTG+GGG | 0.574359 | 8.1:-3376792 | MS.gene035645:intron |
| TTAACCATGGCATTTCTCAA+AGG | 0.576574 | 8.1:-3376560 | MS.gene035645:CDS |
| ACCTCTTCCTGATATGCACC+AGG | 0.580892 | 8.1:+3375996 | None:intergenic |
| TATATTTGCACTGATCAAAG+AGG | 0.589339 | 8.1:-3376210 | MS.gene035645:CDS |
| TATCAAATTACTCATGGCAG+TGG | 0.593988 | 8.1:+3376828 | None:intergenic |
| CTGTGATGACAGTAGCTAGA+GGG | 0.598316 | 8.1:+3375950 | None:intergenic |
| AGGAAATAAGCTGTTACACA+TGG | 0.603802 | 8.1:-3376540 | MS.gene035645:CDS |
| TCTGACTTATCTGTTAGAAG+GGG | 0.613530 | 8.1:+3375569 | None:intergenic |
| TCTTCGAAGTTTAAGAAACG+TGG | 0.615082 | 8.1:-3376621 | MS.gene035645:CDS |
| GATAGGTGCCAATGCCAAAG+TGG | 0.627922 | 8.1:+3377203 | None:intergenic |
| ATATATAGCAGAGAGCAAGA+TGG | 0.639335 | 8.1:-3375546 | MS.gene035645:CDS |
| CCTATACACAACAAAGACTG+TGG | 0.643809 | 8.1:+3377236 | None:intergenic |
| CTATACACAACAAAGACTGT+GGG | 0.650549 | 8.1:+3377237 | None:intergenic |
| AAATAAGCTGTTACACATGG+AGG | 0.654397 | 8.1:-3376537 | MS.gene035645:CDS |
| GTCATGTTGGATGATCATGC+AGG | 0.660106 | 8.1:-3376420 | MS.gene035645:intron |
| CAAACTATACCCAATAAGAG+AGG | 0.666012 | 8.1:+3376996 | None:intergenic |
| GTTGAACATTACACAATACA+GGG | 0.675633 | 8.1:+3375972 | None:intergenic |
| AGACAACAGCACAAAATGGG+TGG | 0.676754 | 8.1:-3377360 | None:intergenic |
| TGTTAGTGGAGCCTTAACCA+TGG | 0.692823 | 8.1:-3376573 | MS.gene035645:CDS |
| GCTGTGATGACAGTAGCTAG+AGG | 0.719243 | 8.1:+3375949 | None:intergenic |
| TTGAACATTACACAATACAG+GGG | 0.751249 | 8.1:+3375973 | None:intergenic |
| GGTTTGTATATTGTGCTATG+GGG | 0.751530 | 8.1:-3375683 | MS.gene035645:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATTATTAGTTC+TGG | + | chr8.1:3376505-3376524 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTATTTTGTTGT+AGG | - | chr8.1:3375809-3375828 | MS.gene035645:intron | 10.0% |
| !! | CATATATGATATATATGAAA+AGG | + | chr8.1:3375785-3375804 | None:intergenic | 15.0% |
| !! | AATAACTGTATTATTGTGTA+TGG | - | chr8.1:3377118-3377137 | MS.gene035645:intron | 20.0% |
| !! | AATAAGTAATAGGATAGATT+TGG | - | chr8.1:3377286-3377305 | MS.gene035645:CDS | 20.0% |
| !! | ACAATATTATTGTTCATCAA+TGG | - | chr8.1:3376548-3376567 | MS.gene035645:CDS | 20.0% |
| !! | TATGATATATATGAAAAGGT+AGG | + | chr8.1:3375781-3375800 | None:intergenic | 20.0% |
| !! | TATTAATCATACAACTATAC+AGG | + | chr8.1:3377083-3377102 | None:intergenic | 20.0% |
| !! | TTATTTGATGAAAAGATGAT+AGG | + | chr8.1:3375700-3375719 | None:intergenic | 20.0% |
| !!! | ATCATATATTATCGACTTTT+TGG | - | chr8.1:3376621-3376640 | MS.gene035645:CDS | 20.0% |
| !!! | TTTAAGAGTATTTTTCATGA+CGG | + | chr8.1:3377044-3377063 | None:intergenic | 20.0% |
| ! | AAACAAATACTACTGTAACT+AGG | + | chr8.1:3376177-3376196 | None:intergenic | 25.0% |
| ! | AAACTGCATGAAATTTGTAA+AGG | + | chr8.1:3376728-3376747 | None:intergenic | 25.0% |
| ! | AAAGTCGATAATATATGATC+CGG | + | chr8.1:3376620-3376639 | None:intergenic | 25.0% |
| ! | ACTCTTAAATCTAACTTTGA+GGG | - | chr8.1:3377055-3377074 | MS.gene035645:CDS | 25.0% |
| ! | AGGATGATGAAATAAGTAAT+AGG | - | chr8.1:3377276-3377295 | MS.gene035645:CDS | 25.0% |
| ! | TACTCTTAAATCTAACTTTG+AGG | - | chr8.1:3377054-3377073 | MS.gene035645:CDS | 25.0% |
| ! | TATAATTGGTTATACATGCA+GGG | - | chr8.1:3375975-3375994 | MS.gene035645:CDS | 25.0% |
| ! | TTATAATTGGTTATACATGC+AGG | - | chr8.1:3375974-3375993 | MS.gene035645:CDS | 25.0% |
| ! | TTTATTCTATGCTTCTTCTA+CGG | - | chr8.1:3376029-3376048 | MS.gene035645:CDS | 25.0% |
| ! | TTTGATTAAACTTTCAACAC+AGG | - | chr8.1:3376574-3376593 | MS.gene035645:CDS | 25.0% |
| !! | AACAAAAGCATAAGAATCAA+AGG | + | chr8.1:3375920-3375939 | None:intergenic | 25.0% |
| !! | ACAAATTGAAATGTTTCTGA+GGG | + | chr8.1:3376775-3376794 | None:intergenic | 25.0% |
| !! | ATTCAATGAATGACATTTTC+TGG | - | chr8.1:3376209-3376228 | MS.gene035645:CDS | 25.0% |
| !! | TACAAATTGAAATGTTTCTG+AGG | + | chr8.1:3376776-3376795 | None:intergenic | 25.0% |
| !! | TCATCTTTTCATCAAATAAG+CGG | - | chr8.1:3375701-3375720 | MS.gene035645:CDS | 25.0% |
| !!! | AATCAGAATGCATATTTTAG+TGG | - | chr8.1:3376006-3376025 | MS.gene035645:CDS | 25.0% |
| !!! | CTGTATTTTTTTGTGATACA+GGG | - | chr8.1:3376832-3376851 | MS.gene035645:CDS | 25.0% |
| !!! | TCTGTATTTTTTTGTGATAC+AGG | - | chr8.1:3376831-3376850 | MS.gene035645:CDS | 25.0% |
| AAGAAGAGTTATACATTGGA+AGG | - | chr8.1:3376980-3376999 | MS.gene035645:intron | 30.0% | |
| ACAAGAAGAATGAGAGTAAT+TGG | + | chr8.1:3375757-3375776 | None:intergenic | 30.0% | |
| AGATGGTTATCTTACAGTAA+TGG | - | chr8.1:3375549-3375568 | MS.gene035645:CDS | 30.0% | |
| AGTAATTGGTTAAGATCAGA+GGG | + | chr8.1:3375743-3375762 | None:intergenic | 30.0% | |
| ATGTTTATGACCTCTCTTAT+TGG | - | chr8.1:3375877-3375896 | MS.gene035645:intron | 30.0% | |
| ATTCTGACTTATCTGTTAGA+AGG | + | chr8.1:3377319-3377338 | None:intergenic | 30.0% | |
| CAATGTATAACTCTTCTTGT+AGG | + | chr8.1:3376978-3376997 | None:intergenic | 30.0% | |
| CTACAAGAAGAGTTATACAT+TGG | - | chr8.1:3376976-3376995 | MS.gene035645:intron | 30.0% | |
| CTTACAGTAATGGTTATGAT+AGG | - | chr8.1:3375559-3375578 | MS.gene035645:CDS | 30.0% | |
| GCAAATACAAAAGTTAATGC+AGG | + | chr8.1:3376081-3376100 | None:intergenic | 30.0% | |
| GTTGAACATTACACAATACA+GGG | + | chr8.1:3376914-3376933 | None:intergenic | 30.0% | |
| TGTTTATGACCTCTCTTATT+GGG | - | chr8.1:3375878-3375897 | MS.gene035645:intron | 30.0% | |
| TTCATCAAATAAGCGGTAAT+TGG | - | chr8.1:3375708-3375727 | MS.gene035645:CDS | 30.0% | |
| TTCTGACTTATCTGTTAGAA+GGG | + | chr8.1:3377318-3377337 | None:intergenic | 30.0% | |
| TTGAACATTACACAATACAG+GGG | + | chr8.1:3376913-3376932 | None:intergenic | 30.0% | |
| TTTAGTCTCATCAAAGTCTT+TGG | + | chr8.1:3377231-3377250 | None:intergenic | 30.0% | |
| TTTGTATTTGCAGCAATCTT+GGG | - | chr8.1:3376090-3376109 | MS.gene035645:intron | 30.0% | |
| ! | TATATTTGCACTGATCAAAG+AGG | - | chr8.1:3376673-3376692 | MS.gene035645:intron | 30.0% |
| ! | TGGTTTGTATATTGTGCTAT+GGG | - | chr8.1:3377199-3377218 | MS.gene035645:CDS | 30.0% |
| ! | TTGTAGGAGACAATCTTTTA+AGG | - | chr8.1:3375825-3375844 | MS.gene035645:intron | 30.0% |
| ! | TTTTGTATTTGCAGCAATCT+TGG | - | chr8.1:3376089-3376108 | MS.gene035645:intron | 30.0% |
| !!! | CAATCTTTTAAGGCTTCATT+AGG | - | chr8.1:3375835-3375854 | MS.gene035645:intron | 30.0% |
| !!! | TCTTAGCAAGTAGTGTTTTT+TGG | - | chr8.1:3376441-3376460 | MS.gene035645:CDS | 30.0% |
| !!! | TTTTTTGTGATACAGGGAAT+TGG | - | chr8.1:3376838-3376857 | MS.gene035645:CDS | 30.0% |
| AAATAAGCTGTTACACATGG+AGG | - | chr8.1:3376346-3376365 | MS.gene035645:intron | 35.0% | |
| AAGAGGAGAATCTTCAAGTA+TGG | - | chr8.1:3376690-3376709 | MS.gene035645:intron | 35.0% | |
| AGAAACGTGGCAAAGATATT+AGG | - | chr8.1:3376275-3376294 | MS.gene035645:CDS | 35.0% | |
| AGGAAATAAGCTGTTACACA+TGG | - | chr8.1:3376343-3376362 | MS.gene035645:intron | 35.0% | |
| ATATATAGCAGAGAGCAAGA+TGG | - | chr8.1:3377337-3377356 | MS.gene035645:CDS | 35.0% | |
| ATATGCAGTAAGTCTCTAAC+AGG | - | chr8.1:3376748-3376767 | MS.gene035645:intron | 35.0% | |
| ATCATCCATTTCAGTTTGGT+AGG | - | chr8.1:3377158-3377177 | MS.gene035645:intron | 35.0% | |
| ATGCATCATCCATTTCAGTT+TGG | - | chr8.1:3377154-3377173 | MS.gene035645:intron | 35.0% | |
| CAAACTATACCCAATAAGAG+AGG | + | chr8.1:3375890-3375909 | None:intergenic | 35.0% | |
| CTATACACAACAAAGACTGT+GGG | + | chr8.1:3375649-3375668 | None:intergenic | 35.0% | |
| GAAACGTGGCAAAGATATTA+GGG | - | chr8.1:3376276-3376295 | MS.gene035645:CDS | 35.0% | |
| GAGTAATTGGTTAAGATCAG+AGG | + | chr8.1:3375744-3375763 | None:intergenic | 35.0% | |
| GGTTGAACATTACACAATAC+AGG | + | chr8.1:3376915-3376934 | None:intergenic | 35.0% | |
| GGTTTGTATATTGTGCTATG+GGG | - | chr8.1:3377200-3377219 | MS.gene035645:CDS | 35.0% | |
| TATCAAATTACTCATGGCAG+TGG | + | chr8.1:3376058-3376077 | None:intergenic | 35.0% | |
| TCATCCATTTCAGTTTGGTA+GGG | - | chr8.1:3377159-3377178 | MS.gene035645:intron | 35.0% | |
| TCTGACTTATCTGTTAGAAG+GGG | + | chr8.1:3377317-3377336 | None:intergenic | 35.0% | |
| TCTTCGAAGTTTAAGAAACG+TGG | - | chr8.1:3376262-3376281 | MS.gene035645:CDS | 35.0% | |
| TGCAGGTATCAAATTACTCA+TGG | + | chr8.1:3376064-3376083 | None:intergenic | 35.0% | |
| TTAACCATGGCATTTCTCAA+AGG | - | chr8.1:3376323-3376342 | MS.gene035645:intron | 35.0% | |
| TTGTATTTGCAGCAATCTTG+GGG | - | chr8.1:3376091-3376110 | MS.gene035645:intron | 35.0% | |
| TTTGAGAAATGCCATGGTTA+AGG | + | chr8.1:3376324-3376343 | None:intergenic | 35.0% | |
| ! | ATTTCCTTTGAGAAATGCCA+TGG | + | chr8.1:3376330-3376349 | None:intergenic | 35.0% |
| ! | GTGGTTTGTATATTGTGCTA+TGG | - | chr8.1:3377198-3377217 | MS.gene035645:CDS | 35.0% |
| !!! | GTAGTGTTTTTTGGTCATGT+TGG | - | chr8.1:3376450-3376469 | MS.gene035645:CDS | 35.0% |
| ACAAGAGCTGCTCTATTAGA+TGG | - | chr8.1:3375616-3375635 | MS.gene035645:CDS | 40.0% | |
| CATCCATTTCAGTTTGGTAG+GGG | - | chr8.1:3377160-3377179 | MS.gene035645:intron | 40.0% | |
| CCTATACACAACAAAGACTG+TGG | + | chr8.1:3375650-3375669 | None:intergenic | 40.0% | |
| GGAGATGATACTTGGATTCT+GGG | - | chr8.1:3376407-3376426 | MS.gene035645:intron | 40.0% | |
| TAGAGCAGCTCTTGTAAAGA+TGG | + | chr8.1:3375611-3375630 | None:intergenic | 40.0% | |
| TCATCCTGCATTTGTGATTG+TGG | + | chr8.1:3377263-3377282 | None:intergenic | 40.0% | |
| TCCGGACAAGATGAAGAAAT+CGG | + | chr8.1:3376602-3376621 | None:intergenic | 40.0% | |
| TGGAGATGATACTTGGATTC+TGG | - | chr8.1:3376406-3376425 | MS.gene035645:intron | 40.0% | |
| ! | CCACAGTCTTTGTTGTGTAT+AGG | - | chr8.1:3375647-3375666 | MS.gene035645:CDS | 40.0% |
| ! | GTCTTTGTTGTGTATAGGCA+AGG | - | chr8.1:3375652-3375671 | MS.gene035645:CDS | 40.0% |
| !! | GGGACAATTTGTTGTGTTAG+TGG | - | chr8.1:3376296-3376315 | MS.gene035645:intron | 40.0% |
| AAGCCCCTACCAAACTGAAA+TGG | + | chr8.1:3377166-3377185 | None:intergenic | 45.0% | |
| AGCTACTGTCATCACAGCTT+TGG | - | chr8.1:3376939-3376958 | MS.gene035645:intron | 45.0% | |
| ATTCAGTCCTGGTGCATATC+AGG | - | chr8.1:3376880-3376899 | MS.gene035645:CDS | 45.0% | |
| CTAGCTTCTTCATTCAGTCC+TGG | - | chr8.1:3376869-3376888 | MS.gene035645:CDS | 45.0% | |
| CTGCAAGTGGAGATGATACT+TGG | - | chr8.1:3376399-3376418 | MS.gene035645:intron | 45.0% | |
| CTGTGATGACAGTAGCTAGA+GGG | + | chr8.1:3376936-3376955 | None:intergenic | 45.0% | |
| GCTACCACAATCACAAATGC+AGG | - | chr8.1:3377256-3377275 | MS.gene035645:CDS | 45.0% | |
| GTCATGTTGGATGATCATGC+AGG | - | chr8.1:3376463-3376482 | MS.gene035645:CDS | 45.0% | |
| TCCAAACATCTCACTGCAAG+TGG | - | chr8.1:3376386-3376405 | MS.gene035645:intron | 45.0% | |
| TCCACTTGCAGTGAGATGTT+TGG | + | chr8.1:3376390-3376409 | None:intergenic | 45.0% | |
| TGTTAGTGGAGCCTTAACCA+TGG | - | chr8.1:3376310-3376329 | MS.gene035645:intron | 45.0% | |
| ! | GCAGTGAGATGTTTGGAATC+AGG | + | chr8.1:3376383-3376402 | None:intergenic | 45.0% |
| ! | GCCGATTTCTTCATCTTGTC+CGG | - | chr8.1:3376598-3376617 | MS.gene035645:CDS | 45.0% |
| ! | TTCAGTTTGGTAGGGGCTTT+TGG | - | chr8.1:3377167-3377186 | MS.gene035645:intron | 45.0% |
| !! | AATAATAATAATAATCTTAT+AGG | - | chr8.1:3376522-3376541 | MS.gene035645:CDS | 5.0% |
| !! | ACAAAATAAATAATTATAAT+TGG | - | chr8.1:3375961-3375980 | MS.gene035645:CDS | 5.0% |
| !! | ATAATAATAATAATCTTATA+GGG | - | chr8.1:3376523-3376542 | MS.gene035645:CDS | 5.0% |
| ACCTCTTCCTGATATGCACC+AGG | + | chr8.1:3376890-3376909 | None:intergenic | 50.0% | |
| GATAGGTGCCAATGCCAAAG+TGG | + | chr8.1:3375683-3375702 | None:intergenic | 50.0% | |
| GATGATGCATGTGAGCGAGT+AGG | + | chr8.1:3377144-3377163 | None:intergenic | 50.0% | |
| GCTGTGATGACAGTAGCTAG+AGG | + | chr8.1:3376937-3376956 | None:intergenic | 50.0% | |
| TAGGCAAGGCATAGCCACTT+TGG | - | chr8.1:3375666-3375685 | MS.gene035645:CDS | 50.0% | |
| TCCTGGTGCATATCAGGAAG+AGG | - | chr8.1:3376886-3376905 | MS.gene035645:CDS | 50.0% | |
| ! | AGGCATAGCCACTTTGGCAT+TGG | - | chr8.1:3375672-3375691 | MS.gene035645:CDS | 50.0% |
| !!! | GGGGCTTTTGGAGTGATAAG+TGG | - | chr8.1:3377179-3377198 | MS.gene035645:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 3375538 | 3377367 | 3375538 | ID=MS.gene035645 |
| chr8.1 | mRNA | 3375538 | 3377367 | 3375538 | ID=MS.gene035645.t1;Parent=MS.gene035645 |
| chr8.1 | exon | 3377183 | 3377367 | 3377183 | ID=MS.gene035645.t1.exon1;Parent=MS.gene035645.t1 |
| chr8.1 | CDS | 3377183 | 3377367 | 3377183 | ID=cds.MS.gene035645.t1;Parent=MS.gene035645.t1 |
| chr8.1 | exon | 3377006 | 3377074 | 3377006 | ID=MS.gene035645.t1.exon2;Parent=MS.gene035645.t1 |
| chr8.1 | CDS | 3377006 | 3377074 | 3377006 | ID=cds.MS.gene035645.t1;Parent=MS.gene035645.t1 |
| chr8.1 | exon | 3376793 | 3376909 | 3376793 | ID=MS.gene035645.t1.exon3;Parent=MS.gene035645.t1 |
| chr8.1 | CDS | 3376793 | 3376909 | 3376793 | ID=cds.MS.gene035645.t1;Parent=MS.gene035645.t1 |
| chr8.1 | exon | 3376421 | 3376658 | 3376421 | ID=MS.gene035645.t1.exon4;Parent=MS.gene035645.t1 |
| chr8.1 | CDS | 3376421 | 3376658 | 3376421 | ID=cds.MS.gene035645.t1;Parent=MS.gene035645.t1 |
| chr8.1 | exon | 3376151 | 3376309 | 3376151 | ID=MS.gene035645.t1.exon5;Parent=MS.gene035645.t1 |
| chr8.1 | CDS | 3376151 | 3376309 | 3376151 | ID=cds.MS.gene035645.t1;Parent=MS.gene035645.t1 |
| chr8.1 | exon | 3375904 | 3376052 | 3375904 | ID=MS.gene035645.t1.exon6;Parent=MS.gene035645.t1 |
| chr8.1 | CDS | 3375904 | 3376052 | 3375904 | ID=cds.MS.gene035645.t1;Parent=MS.gene035645.t1 |
| chr8.1 | exon | 3375538 | 3375733 | 3375538 | ID=MS.gene035645.t1.exon7;Parent=MS.gene035645.t1 |
| chr8.1 | CDS | 3375538 | 3375733 | 3375538 | ID=cds.MS.gene035645.t1;Parent=MS.gene035645.t1 |
| Gene Sequence |
| Protein sequence |
