Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018396.t1 | XP_013458553.1 | 96.8 | 370 | 11 | 1 | 1 | 370 | 1 | 369 | 3.50E-196 | 694.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018396.t1 | Q9SUD5 | 44.1 | 365 | 189 | 5 | 7 | 370 | 6 | 356 | 3.5e-80 | 300.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018396.t1 | A0A072URZ6 | 96.8 | 370 | 11 | 1 | 1 | 370 | 1 | 369 | 2.5e-196 | 694.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018396 | MS.gene055334 | PPI |
| MS.gene018396 | MS.gene055336 | PPI |
| MS.gene022545 | MS.gene018396 | PPI |
| MS.gene018396 | MS.gene030673 | PPI |
| MS.gene018396 | MS.gene58123 | PPI |
| MS.gene018396 | MS.gene91824 | PPI |
| MS.gene018396 | MS.gene62756 | PPI |
| MS.gene018396 | MS.gene70269 | PPI |
| MS.gene28443 | MS.gene018396 | PPI |
| MS.gene018396 | MS.gene022543 | PPI |
| MS.gene018396 | MS.gene31007 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018396.t1 | MTR_4g129650 | 96.757 | 370 | 11 | 1 | 1 | 370 | 1 | 369 | 0.0 | 732 |
| MS.gene018396.t1 | MTR_4g129650 | 96.958 | 263 | 7 | 1 | 108 | 370 | 1 | 262 | 0.0 | 527 |
| MS.gene018396.t1 | MTR_8g006010 | 49.041 | 365 | 173 | 6 | 1 | 358 | 1 | 359 | 1.58e-114 | 338 |
| MS.gene018396.t1 | MTR_2g065550 | 46.849 | 365 | 181 | 3 | 4 | 356 | 6 | 369 | 1.85e-109 | 325 |
| MS.gene018396.t1 | MTR_8g006120 | 48.541 | 377 | 183 | 6 | 1 | 370 | 1 | 373 | 9.55e-109 | 323 |
| MS.gene018396.t1 | MTR_8g006090 | 48.634 | 366 | 171 | 6 | 2 | 360 | 3 | 358 | 7.59e-106 | 315 |
| MS.gene018396.t1 | MTR_8g006050 | 45.699 | 372 | 154 | 8 | 4 | 360 | 7 | 345 | 4.28e-97 | 293 |
| MS.gene018396.t1 | MTR_8g006090 | 47.910 | 311 | 150 | 5 | 2 | 305 | 3 | 308 | 9.76e-85 | 259 |
| MS.gene018396.t1 | MTR_8g006090 | 50.350 | 286 | 129 | 4 | 80 | 360 | 1 | 278 | 1.90e-83 | 255 |
| MS.gene018396.t1 | MTR_7g111830 | 34.211 | 342 | 201 | 5 | 8 | 334 | 7 | 339 | 1.03e-64 | 211 |
| MS.gene018396.t1 | MTR_8g006090 | 47.638 | 254 | 122 | 4 | 2 | 249 | 3 | 251 | 1.42e-62 | 202 |
| MS.gene018396.t1 | MTR_1g068630 | 33.131 | 329 | 210 | 5 | 16 | 340 | 23 | 345 | 1.86e-62 | 204 |
| MS.gene018396.t1 | MTR_1g038560 | 34.320 | 338 | 214 | 4 | 10 | 344 | 5 | 337 | 2.53e-62 | 203 |
| MS.gene018396.t1 | MTR_2g016710 | 32.670 | 352 | 219 | 5 | 1 | 339 | 1 | 347 | 2.66e-62 | 204 |
| MS.gene018396.t1 | MTR_6g036450 | 34.066 | 364 | 214 | 7 | 4 | 352 | 5 | 357 | 3.22e-61 | 201 |
| MS.gene018396.t1 | MTR_3g112480 | 34.218 | 377 | 215 | 8 | 13 | 363 | 25 | 394 | 2.25e-60 | 199 |
| MS.gene018396.t1 | MTR_1g023180 | 33.333 | 378 | 220 | 7 | 11 | 361 | 24 | 396 | 3.76e-60 | 199 |
| MS.gene018396.t1 | MTR_1g114210 | 33.526 | 346 | 207 | 7 | 8 | 344 | 13 | 344 | 2.62e-59 | 195 |
| MS.gene018396.t1 | MTR_2g007960 | 31.536 | 371 | 237 | 7 | 3 | 361 | 7 | 372 | 2.86e-59 | 197 |
| MS.gene018396.t1 | MTR_6g081840 | 34.211 | 342 | 212 | 5 | 17 | 350 | 19 | 355 | 4.01e-59 | 195 |
| MS.gene018396.t1 | MTR_2g027030 | 35.501 | 369 | 216 | 9 | 4 | 361 | 8 | 365 | 5.28e-59 | 195 |
| MS.gene018396.t1 | MTR_3g012420 | 36.503 | 326 | 196 | 5 | 13 | 332 | 22 | 342 | 5.65e-59 | 196 |
| MS.gene018396.t1 | MTR_1g074120 | 33.237 | 346 | 209 | 6 | 11 | 345 | 19 | 353 | 7.48e-59 | 194 |
| MS.gene018396.t1 | MTR_1g030400 | 30.812 | 357 | 216 | 7 | 17 | 352 | 16 | 362 | 9.26e-58 | 192 |
| MS.gene018396.t1 | MTR_8g041390 | 31.044 | 364 | 237 | 6 | 13 | 369 | 18 | 374 | 1.40e-57 | 192 |
| MS.gene018396.t1 | MTR_1g074160 | 34.218 | 339 | 211 | 5 | 11 | 344 | 16 | 347 | 2.31e-57 | 190 |
| MS.gene018396.t1 | MTR_2g007990 | 31.915 | 376 | 238 | 7 | 4 | 367 | 11 | 380 | 6.73e-57 | 191 |
| MS.gene018396.t1 | MTR_1g070175 | 31.195 | 343 | 223 | 6 | 10 | 350 | 22 | 353 | 3.15e-56 | 188 |
| MS.gene018396.t1 | MTR_1g073990 | 33.036 | 336 | 220 | 3 | 11 | 344 | 19 | 351 | 5.58e-56 | 187 |
| MS.gene018396.t1 | MTR_7g100050 | 32.394 | 355 | 216 | 9 | 16 | 362 | 21 | 359 | 9.76e-56 | 187 |
| MS.gene018396.t1 | MTR_3g095450 | 32.873 | 362 | 227 | 8 | 1 | 354 | 1 | 354 | 2.33e-55 | 186 |
| MS.gene018396.t1 | MTR_8g092650 | 33.043 | 345 | 212 | 5 | 11 | 346 | 8 | 342 | 2.92e-55 | 185 |
| MS.gene018396.t1 | MTR_3g072530 | 31.700 | 347 | 220 | 8 | 14 | 351 | 20 | 358 | 6.47e-55 | 184 |
| MS.gene018396.t1 | MTR_3g095420 | 30.387 | 362 | 235 | 7 | 1 | 353 | 3 | 356 | 9.38e-55 | 184 |
| MS.gene018396.t1 | MTR_2g007260 | 35.211 | 355 | 213 | 6 | 3 | 345 | 9 | 358 | 1.02e-54 | 185 |
| MS.gene018396.t1 | MTR_1g074070 | 32.849 | 344 | 206 | 8 | 3 | 333 | 11 | 342 | 1.31e-54 | 183 |
| MS.gene018396.t1 | MTR_3g095460 | 31.395 | 344 | 224 | 5 | 1 | 338 | 1 | 338 | 2.35e-54 | 182 |
| MS.gene018396.t1 | MTR_1g051120 | 32.647 | 340 | 219 | 6 | 11 | 344 | 19 | 354 | 1.66e-53 | 181 |
| MS.gene018396.t1 | MTR_2g007970 | 32.908 | 392 | 227 | 10 | 4 | 369 | 8 | 389 | 2.09e-53 | 181 |
| MS.gene018396.t1 | MTR_2g102340 | 32.665 | 349 | 221 | 8 | 4 | 345 | 8 | 349 | 3.43e-53 | 180 |
| MS.gene018396.t1 | MTR_1g074020 | 31.728 | 353 | 215 | 8 | 11 | 353 | 16 | 352 | 1.23e-51 | 176 |
| MS.gene018396.t1 | MTR_3g090550 | 33.968 | 315 | 198 | 5 | 23 | 334 | 21 | 328 | 2.52e-51 | 174 |
| MS.gene018396.t1 | MTR_5g021160 | 32.123 | 358 | 220 | 8 | 16 | 360 | 15 | 362 | 3.62e-51 | 175 |
| MS.gene018396.t1 | MTR_3g112480 | 33.871 | 310 | 177 | 6 | 79 | 363 | 33 | 339 | 4.69e-51 | 174 |
| MS.gene018396.t1 | MTR_2g016710 | 32.333 | 300 | 196 | 4 | 11 | 308 | 11 | 305 | 2.08e-50 | 171 |
| MS.gene018396.t1 | MTR_4g106720 | 33.333 | 315 | 196 | 6 | 33 | 339 | 37 | 345 | 5.14e-50 | 171 |
| MS.gene018396.t1 | MTR_1g030580 | 29.799 | 349 | 235 | 5 | 3 | 347 | 11 | 353 | 6.19e-50 | 172 |
| MS.gene018396.t1 | MTR_3g072500 | 28.909 | 339 | 230 | 5 | 11 | 343 | 23 | 356 | 6.34e-50 | 172 |
| MS.gene018396.t1 | MTR_3g072560 | 30.571 | 350 | 229 | 6 | 11 | 354 | 21 | 362 | 2.94e-49 | 171 |
| MS.gene018396.t1 | MTR_4g094340 | 31.198 | 359 | 218 | 9 | 11 | 357 | 12 | 353 | 2.74e-48 | 167 |
| MS.gene018396.t1 | MTR_4g094340 | 31.081 | 370 | 225 | 10 | 1 | 357 | 19 | 371 | 3.46e-48 | 167 |
| MS.gene018396.t1 | MTR_5g034990 | 32.432 | 333 | 209 | 6 | 28 | 359 | 34 | 351 | 7.57e-48 | 166 |
| MS.gene018396.t1 | MTR_0096s0100 | 28.818 | 347 | 242 | 3 | 7 | 351 | 17 | 360 | 1.33e-47 | 165 |
| MS.gene018396.t1 | MTR_8g092650 | 33.457 | 269 | 165 | 3 | 86 | 346 | 2 | 264 | 1.63e-45 | 157 |
| MS.gene018396.t1 | MTR_1g030600 | 29.301 | 372 | 236 | 7 | 11 | 359 | 21 | 388 | 2.45e-45 | 160 |
| MS.gene018396.t1 | MTR_0103s0090 | 31.563 | 339 | 208 | 7 | 28 | 350 | 31 | 361 | 9.84e-44 | 155 |
| MS.gene018396.t1 | MTR_3g095440 | 30.769 | 364 | 232 | 8 | 1 | 354 | 1 | 354 | 1.11e-43 | 155 |
| MS.gene018396.t1 | MTR_4g094360 | 32.024 | 331 | 213 | 6 | 10 | 333 | 16 | 341 | 1.31e-43 | 155 |
| MS.gene018396.t1 | MTR_5g025330 | 30.871 | 379 | 230 | 8 | 1 | 362 | 3 | 366 | 2.80e-43 | 158 |
| MS.gene018396.t1 | MTR_4g094362 | 31.515 | 330 | 219 | 5 | 10 | 335 | 16 | 342 | 4.49e-43 | 154 |
| MS.gene018396.t1 | MTR_6g007743 | 31.672 | 341 | 221 | 7 | 7 | 343 | 11 | 343 | 4.51e-42 | 150 |
| MS.gene018396.t1 | MTR_3g072500 | 31.225 | 253 | 168 | 3 | 96 | 343 | 2 | 253 | 4.97e-42 | 149 |
| MS.gene018396.t1 | MTR_4g094340 | 33.818 | 275 | 167 | 5 | 90 | 357 | 21 | 287 | 8.40e-42 | 148 |
| MS.gene018396.t1 | MTR_5g034910 | 32.537 | 335 | 217 | 6 | 4 | 334 | 3 | 332 | 1.44e-41 | 149 |
| MS.gene018396.t1 | MTR_6g007760 | 32.746 | 284 | 182 | 4 | 28 | 307 | 31 | 309 | 2.77e-41 | 147 |
| MS.gene018396.t1 | MTR_5g025290 | 30.137 | 365 | 232 | 6 | 3 | 349 | 6 | 365 | 3.38e-41 | 149 |
| MS.gene018396.t1 | MTR_4g094342 | 29.969 | 327 | 217 | 4 | 4 | 322 | 9 | 331 | 5.01e-41 | 148 |
| MS.gene018396.t1 | MTR_5g025290 | 30.137 | 365 | 232 | 6 | 3 | 349 | 34 | 393 | 9.30e-41 | 148 |
| MS.gene018396.t1 | MTR_8g006090 | 50.000 | 174 | 80 | 2 | 80 | 249 | 1 | 171 | 1.28e-40 | 143 |
| MS.gene018396.t1 | MTR_5g089390 | 30.088 | 339 | 223 | 6 | 13 | 349 | 19 | 345 | 4.00e-40 | 145 |
| MS.gene018396.t1 | MTR_5g021160 | 32.028 | 281 | 171 | 7 | 93 | 360 | 6 | 279 | 5.94e-40 | 143 |
| MS.gene018396.t1 | MTR_3g072520 | 28.446 | 341 | 235 | 5 | 11 | 345 | 12 | 349 | 1.26e-39 | 145 |
| MS.gene018396.t1 | MTR_3g019050 | 29.477 | 363 | 233 | 7 | 13 | 366 | 23 | 371 | 1.51e-39 | 144 |
| MS.gene018396.t1 | MTR_0103s0090 | 32.234 | 273 | 164 | 5 | 94 | 350 | 3 | 270 | 2.51e-39 | 141 |
| MS.gene018396.t1 | MTR_1g014510 | 31.892 | 370 | 223 | 9 | 1 | 350 | 1 | 361 | 2.56e-39 | 145 |
| MS.gene018396.t1 | MTR_4g094352 | 29.683 | 347 | 227 | 4 | 10 | 344 | 14 | 355 | 3.58e-39 | 144 |
| MS.gene018396.t1 | MTR_6g007750 | 29.700 | 367 | 234 | 10 | 8 | 367 | 12 | 361 | 1.44e-38 | 141 |
| MS.gene018396.t1 | MTR_4g094360 | 34.127 | 252 | 157 | 4 | 89 | 333 | 45 | 294 | 3.49e-38 | 140 |
| MS.gene018396.t1 | MTR_5g025370 | 29.769 | 346 | 216 | 7 | 27 | 353 | 29 | 366 | 3.80e-38 | 140 |
| MS.gene018396.t1 | MTR_5g034930 | 30.380 | 316 | 213 | 5 | 28 | 339 | 26 | 338 | 5.34e-38 | 139 |
| MS.gene018396.t1 | MTR_3g112480 | 31.599 | 269 | 156 | 6 | 120 | 363 | 2 | 267 | 6.68e-38 | 137 |
| MS.gene018396.t1 | MTR_5g034980 | 30.065 | 306 | 209 | 4 | 28 | 331 | 27 | 329 | 1.36e-37 | 139 |
| MS.gene018396.t1 | MTR_5g025400 | 28.609 | 381 | 239 | 7 | 1 | 362 | 4 | 370 | 1.43e-37 | 139 |
| MS.gene018396.t1 | MTR_5g068790 | 28.152 | 341 | 231 | 5 | 13 | 347 | 23 | 355 | 2.14e-37 | 139 |
| MS.gene018396.t1 | MTR_6g007747 | 32.312 | 359 | 224 | 8 | 11 | 367 | 15 | 356 | 4.98e-37 | 137 |
| MS.gene018396.t1 | MTR_5g069040 | 26.870 | 361 | 249 | 6 | 13 | 366 | 23 | 375 | 9.19e-36 | 134 |
| MS.gene018396.t1 | MTR_5g025340 | 29.375 | 320 | 205 | 5 | 25 | 327 | 27 | 342 | 1.06e-35 | 134 |
| MS.gene018396.t1 | MTR_6g007740 | 30.205 | 341 | 216 | 7 | 7 | 339 | 11 | 337 | 1.45e-35 | 135 |
| MS.gene018396.t1 | MTR_4g094360 | 30.693 | 303 | 198 | 6 | 10 | 305 | 16 | 313 | 9.75e-34 | 127 |
| MS.gene018396.t1 | MTR_1g074160 | 33.766 | 231 | 143 | 3 | 11 | 238 | 16 | 239 | 1.46e-33 | 125 |
| MS.gene018396.t1 | MTR_6g007757 | 29.830 | 352 | 229 | 8 | 21 | 369 | 26 | 362 | 4.96e-33 | 127 |
| MS.gene018396.t1 | MTR_6g007753 | 29.141 | 326 | 210 | 7 | 47 | 367 | 333 | 642 | 5.06e-32 | 127 |
| MS.gene018396.t1 | MTR_6g007753 | 28.235 | 255 | 167 | 5 | 116 | 367 | 77 | 318 | 2.57e-22 | 99.0 |
| MS.gene018396.t1 | MTR_8g072350 | 29.003 | 331 | 212 | 6 | 25 | 337 | 26 | 351 | 1.89e-31 | 122 |
| MS.gene018396.t1 | MTR_5g034970 | 28.614 | 332 | 219 | 5 | 5 | 334 | 4 | 319 | 3.27e-30 | 118 |
| MS.gene018396.t1 | MTR_3g095440 | 31.061 | 264 | 165 | 5 | 1 | 255 | 1 | 256 | 3.58e-30 | 116 |
| MS.gene018396.t1 | MTR_5g012650 | 29.223 | 373 | 222 | 10 | 1 | 356 | 1 | 348 | 1.25e-29 | 117 |
| MS.gene018396.t1 | MTR_2g102340 | 31.086 | 267 | 172 | 6 | 4 | 265 | 34 | 293 | 2.81e-29 | 115 |
| MS.gene018396.t1 | MTR_5g021160 | 32.389 | 247 | 155 | 4 | 16 | 256 | 15 | 255 | 5.01e-28 | 111 |
| MS.gene018396.t1 | MTR_4g100840 | 29.248 | 359 | 215 | 11 | 13 | 357 | 19 | 352 | 3.76e-27 | 110 |
| MS.gene018396.t1 | MTR_3g072500 | 28.452 | 239 | 161 | 4 | 11 | 244 | 23 | 256 | 6.21e-27 | 108 |
| MS.gene018396.t1 | MTR_3g072530 | 34.184 | 196 | 115 | 6 | 14 | 203 | 20 | 207 | 2.16e-26 | 107 |
| MS.gene018396.t1 | MTR_4g094340 | 29.070 | 258 | 168 | 5 | 1 | 250 | 1 | 251 | 2.97e-25 | 103 |
| MS.gene018396.t1 | MTR_4g094340 | 29.070 | 258 | 168 | 5 | 1 | 250 | 19 | 269 | 4.08e-25 | 103 |
| MS.gene018396.t1 | MTR_1g052205 | 26.122 | 245 | 158 | 6 | 125 | 353 | 14 | 251 | 1.36e-22 | 95.9 |
| MS.gene018396.t1 | MTR_1g051120 | 30.457 | 197 | 133 | 2 | 11 | 206 | 19 | 212 | 1.90e-21 | 91.7 |
| MS.gene018396.t1 | MTR_3g072500 | 28.571 | 203 | 135 | 4 | 11 | 208 | 23 | 220 | 3.81e-21 | 91.3 |
| MS.gene018396.t1 | MTR_1g051120 | 29.897 | 194 | 132 | 2 | 11 | 203 | 19 | 209 | 1.93e-20 | 90.1 |
| MS.gene018396.t1 | MTR_6g007757 | 29.204 | 226 | 151 | 4 | 21 | 244 | 26 | 244 | 2.88e-20 | 89.7 |
| MS.gene018396.t1 | MTR_4g094340 | 28.774 | 212 | 136 | 5 | 1 | 204 | 19 | 223 | 3.11e-19 | 85.9 |
| MS.gene018396.t1 | MTR_5g034980 | 28.767 | 219 | 152 | 3 | 28 | 245 | 27 | 242 | 1.12e-18 | 85.9 |
| MS.gene018396.t1 | MTR_4g094342 | 26.887 | 212 | 146 | 2 | 4 | 209 | 9 | 217 | 6.51e-15 | 74.3 |
| MS.gene018396.t1 | MTR_1g014790 | 36.842 | 114 | 69 | 1 | 94 | 204 | 46 | 159 | 6.15e-14 | 70.5 |
| MS.gene018396.t1 | MTR_4g094348 | 32.374 | 139 | 79 | 4 | 91 | 218 | 2 | 136 | 3.44e-11 | 62.0 |
| MS.gene018396.t1 | MTR_1g068720 | 27.941 | 136 | 94 | 3 | 211 | 342 | 103 | 238 | 9.91e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018396.t1 | AT4G30420 | 43.968 | 373 | 194 | 6 | 1 | 360 | 1 | 371 | 1.01e-107 | 321 |
| MS.gene018396.t1 | AT4G28040 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.15e-106 | 316 |
| MS.gene018396.t1 | AT4G28040 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.15e-106 | 316 |
| MS.gene018396.t1 | AT4G28040 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.15e-106 | 316 |
| MS.gene018396.t1 | AT4G28040 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.15e-106 | 316 |
| MS.gene018396.t1 | AT4G28040 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.15e-106 | 316 |
| MS.gene018396.t1 | AT4G30420 | 43.956 | 364 | 189 | 6 | 11 | 361 | 1 | 362 | 8.26e-105 | 313 |
| MS.gene018396.t1 | AT1G75500 | 36.280 | 328 | 193 | 5 | 11 | 327 | 22 | 344 | 3.65e-62 | 204 |
| MS.gene018396.t1 | AT1G75500 | 36.280 | 328 | 193 | 5 | 11 | 327 | 22 | 344 | 3.65e-62 | 204 |
| MS.gene018396.t1 | AT1G09380 | 35.913 | 323 | 198 | 3 | 8 | 324 | 7 | 326 | 1.04e-61 | 202 |
| MS.gene018396.t1 | AT3G18200 | 34.722 | 360 | 212 | 8 | 10 | 361 | 36 | 380 | 1.97e-58 | 194 |
| MS.gene018396.t1 | AT2G37460 | 31.680 | 363 | 224 | 9 | 13 | 361 | 19 | 371 | 3.37e-56 | 188 |
| MS.gene018396.t1 | AT3G30340 | 35.135 | 333 | 196 | 7 | 11 | 334 | 17 | 338 | 5.27e-55 | 185 |
| MS.gene018396.t1 | AT4G01440 | 33.333 | 342 | 217 | 6 | 1 | 336 | 1 | 337 | 1.76e-54 | 183 |
| MS.gene018396.t1 | AT5G64700 | 31.356 | 354 | 228 | 4 | 7 | 351 | 9 | 356 | 2.41e-53 | 180 |
| MS.gene018396.t1 | AT5G07050 | 31.921 | 354 | 214 | 7 | 13 | 347 | 22 | 367 | 1.52e-52 | 179 |
| MS.gene018396.t1 | AT5G13670 | 28.809 | 361 | 235 | 6 | 16 | 366 | 15 | 363 | 2.23e-52 | 178 |
| MS.gene018396.t1 | AT1G21890 | 29.891 | 368 | 228 | 6 | 1 | 355 | 6 | 356 | 2.94e-52 | 178 |
| MS.gene018396.t1 | AT2G39510 | 31.778 | 343 | 215 | 8 | 11 | 341 | 10 | 345 | 1.33e-51 | 176 |
| MS.gene018396.t1 | AT1G43650 | 32.551 | 341 | 220 | 5 | 11 | 349 | 9 | 341 | 3.07e-51 | 174 |
| MS.gene018396.t1 | AT4G08300 | 30.056 | 356 | 229 | 7 | 2 | 347 | 4 | 349 | 4.53e-50 | 172 |
| MS.gene018396.t1 | AT5G40240 | 36.039 | 308 | 183 | 7 | 28 | 327 | 39 | 340 | 4.96e-49 | 169 |
| MS.gene018396.t1 | AT5G40240 | 36.039 | 308 | 183 | 7 | 28 | 327 | 39 | 340 | 4.96e-49 | 169 |
| MS.gene018396.t1 | AT3G53210 | 32.000 | 350 | 222 | 6 | 11 | 353 | 12 | 352 | 8.07e-49 | 169 |
| MS.gene018396.t1 | AT2G40900 | 30.488 | 328 | 212 | 6 | 13 | 334 | 15 | 332 | 9.21e-49 | 169 |
| MS.gene018396.t1 | AT5G40240 | 36.039 | 308 | 183 | 7 | 28 | 327 | 53 | 354 | 1.13e-48 | 169 |
| MS.gene018396.t1 | AT5G40230 | 34.925 | 335 | 189 | 8 | 28 | 343 | 40 | 364 | 3.02e-48 | 167 |
| MS.gene018396.t1 | AT4G01430 | 32.653 | 343 | 211 | 10 | 28 | 355 | 28 | 365 | 3.42e-48 | 167 |
| MS.gene018396.t1 | AT1G11460 | 33.025 | 324 | 209 | 5 | 10 | 329 | 17 | 336 | 2.17e-47 | 164 |
| MS.gene018396.t1 | AT4G01440 | 31.949 | 313 | 203 | 5 | 1 | 308 | 1 | 308 | 8.28e-47 | 162 |
| MS.gene018396.t1 | AT1G44800 | 29.014 | 355 | 239 | 5 | 2 | 350 | 4 | 351 | 8.48e-47 | 163 |
| MS.gene018396.t1 | AT1G11450 | 31.378 | 341 | 221 | 5 | 10 | 344 | 17 | 350 | 3.34e-46 | 161 |
| MS.gene018396.t1 | AT4G08290 | 30.000 | 360 | 236 | 8 | 11 | 361 | 15 | 367 | 5.15e-46 | 162 |
| MS.gene018396.t1 | AT1G11450 | 32.797 | 311 | 190 | 6 | 43 | 344 | 6 | 306 | 2.45e-45 | 158 |
| MS.gene018396.t1 | AT1G11450 | 34.926 | 272 | 167 | 4 | 79 | 344 | 32 | 299 | 7.28e-44 | 154 |
| MS.gene018396.t1 | AT1G01070 | 29.565 | 345 | 233 | 5 | 4 | 344 | 11 | 349 | 3.77e-43 | 154 |
| MS.gene018396.t1 | AT3G56620 | 28.754 | 313 | 216 | 4 | 13 | 324 | 15 | 321 | 1.26e-42 | 152 |
| MS.gene018396.t1 | AT1G68170 | 31.304 | 345 | 224 | 5 | 10 | 348 | 4 | 341 | 1.56e-42 | 152 |
| MS.gene018396.t1 | AT1G68170 | 31.304 | 345 | 224 | 5 | 10 | 348 | 14 | 351 | 1.85e-42 | 152 |
| MS.gene018396.t1 | AT2G37450 | 29.261 | 352 | 211 | 7 | 1 | 347 | 1 | 319 | 3.42e-42 | 150 |
| MS.gene018396.t1 | AT1G11450 | 35.249 | 261 | 159 | 4 | 90 | 344 | 2 | 258 | 5.55e-42 | 147 |
| MS.gene018396.t1 | AT1G21890 | 30.408 | 319 | 199 | 6 | 1 | 305 | 6 | 315 | 1.03e-40 | 147 |
| MS.gene018396.t1 | AT3G28050 | 29.971 | 347 | 225 | 7 | 28 | 369 | 31 | 364 | 1.11e-40 | 147 |
| MS.gene018396.t1 | AT3G53210 | 32.482 | 274 | 174 | 4 | 86 | 353 | 27 | 295 | 1.58e-40 | 145 |
| MS.gene018396.t1 | AT4G01440 | 34.632 | 231 | 144 | 4 | 111 | 336 | 1 | 229 | 2.77e-40 | 143 |
| MS.gene018396.t1 | AT4G01440 | 34.632 | 231 | 144 | 4 | 111 | 336 | 1 | 229 | 2.77e-40 | 143 |
| MS.gene018396.t1 | AT1G01070 | 32.593 | 270 | 175 | 4 | 79 | 344 | 36 | 302 | 8.11e-40 | 144 |
| MS.gene018396.t1 | AT3G18200 | 34.733 | 262 | 151 | 7 | 108 | 361 | 1 | 250 | 4.37e-39 | 140 |
| MS.gene018396.t1 | AT4G15540 | 34.251 | 327 | 189 | 7 | 28 | 343 | 36 | 347 | 1.31e-38 | 141 |
| MS.gene018396.t1 | AT4G15540 | 34.251 | 327 | 189 | 7 | 28 | 343 | 36 | 347 | 1.31e-38 | 141 |
| MS.gene018396.t1 | AT4G01450 | 31.871 | 342 | 222 | 6 | 1 | 338 | 1 | 335 | 1.03e-37 | 139 |
| MS.gene018396.t1 | AT5G40210 | 30.887 | 327 | 200 | 6 | 5 | 327 | 10 | 314 | 2.06e-37 | 138 |
| MS.gene018396.t1 | AT4G01440 | 33.077 | 260 | 165 | 4 | 1 | 256 | 1 | 255 | 2.62e-37 | 135 |
| MS.gene018396.t1 | AT4G01430 | 32.753 | 287 | 180 | 8 | 27 | 305 | 27 | 308 | 5.60e-37 | 136 |
| MS.gene018396.t1 | AT3G28070 | 31.907 | 257 | 166 | 4 | 94 | 345 | 7 | 259 | 1.59e-36 | 134 |
| MS.gene018396.t1 | AT1G25270 | 27.011 | 348 | 243 | 6 | 9 | 351 | 3 | 344 | 2.01e-36 | 135 |
| MS.gene018396.t1 | AT3G28130 | 30.682 | 264 | 172 | 4 | 94 | 349 | 9 | 269 | 2.33e-36 | 133 |
| MS.gene018396.t1 | AT3G28130 | 30.682 | 264 | 172 | 4 | 94 | 349 | 9 | 269 | 2.33e-36 | 133 |
| MS.gene018396.t1 | AT3G28070 | 31.907 | 257 | 166 | 4 | 94 | 345 | 99 | 351 | 9.87e-36 | 134 |
| MS.gene018396.t1 | AT3G28130 | 30.682 | 264 | 172 | 4 | 94 | 349 | 95 | 355 | 1.35e-35 | 133 |
| MS.gene018396.t1 | AT3G45870 | 30.793 | 328 | 204 | 7 | 11 | 322 | 14 | 334 | 2.85e-35 | 133 |
| MS.gene018396.t1 | AT1G11450 | 30.795 | 302 | 196 | 5 | 10 | 305 | 17 | 311 | 8.57e-35 | 130 |
| MS.gene018396.t1 | AT3G28100 | 33.198 | 247 | 156 | 4 | 94 | 335 | 96 | 338 | 2.16e-34 | 130 |
| MS.gene018396.t1 | AT4G01450 | 30.844 | 308 | 203 | 5 | 1 | 305 | 1 | 301 | 2.94e-34 | 129 |
| MS.gene018396.t1 | AT2G37450 | 31.102 | 254 | 161 | 5 | 99 | 347 | 3 | 247 | 4.25e-34 | 127 |
| MS.gene018396.t1 | AT5G45370 | 27.327 | 333 | 219 | 6 | 27 | 356 | 38 | 350 | 1.11e-33 | 128 |
| MS.gene018396.t1 | AT3G28080 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.77e-33 | 125 |
| MS.gene018396.t1 | AT3G28080 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.77e-33 | 125 |
| MS.gene018396.t1 | AT3G28080 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.77e-33 | 125 |
| MS.gene018396.t1 | AT3G28080 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.77e-33 | 125 |
| MS.gene018396.t1 | AT5G47470 | 28.852 | 357 | 224 | 8 | 11 | 357 | 28 | 364 | 2.97e-33 | 127 |
| MS.gene018396.t1 | AT5G47470 | 28.852 | 357 | 224 | 8 | 11 | 357 | 56 | 392 | 4.30e-33 | 127 |
| MS.gene018396.t1 | AT5G47470 | 29.819 | 332 | 214 | 7 | 11 | 332 | 56 | 378 | 1.09e-32 | 126 |
| MS.gene018396.t1 | AT3G28080 | 29.795 | 292 | 177 | 7 | 57 | 335 | 62 | 338 | 1.42e-32 | 125 |
| MS.gene018396.t1 | AT3G28080 | 31.020 | 245 | 160 | 4 | 96 | 335 | 90 | 330 | 1.46e-32 | 125 |
| MS.gene018396.t1 | AT4G01430 | 33.043 | 230 | 138 | 7 | 140 | 355 | 1 | 228 | 2.17e-32 | 121 |
| MS.gene018396.t1 | AT3G30340 | 32.143 | 252 | 154 | 5 | 11 | 256 | 17 | 257 | 3.01e-32 | 122 |
| MS.gene018396.t1 | AT4G16620 | 30.321 | 343 | 198 | 9 | 34 | 356 | 37 | 358 | 1.08e-31 | 123 |
| MS.gene018396.t1 | AT4G01450 | 32.143 | 252 | 162 | 4 | 1 | 250 | 1 | 245 | 1.67e-31 | 120 |
| MS.gene018396.t1 | AT5G64700 | 29.183 | 257 | 168 | 3 | 7 | 255 | 9 | 259 | 3.86e-31 | 119 |
| MS.gene018396.t1 | AT5G45370 | 26.934 | 349 | 224 | 8 | 27 | 356 | 38 | 374 | 4.86e-31 | 121 |
| MS.gene018396.t1 | AT5G45370 | 26.934 | 349 | 224 | 8 | 27 | 356 | 38 | 374 | 4.86e-31 | 121 |
| MS.gene018396.t1 | AT3G53210 | 31.076 | 251 | 160 | 4 | 11 | 255 | 12 | 255 | 6.01e-31 | 119 |
| MS.gene018396.t1 | AT1G70260 | 26.149 | 348 | 247 | 5 | 23 | 361 | 26 | 372 | 1.97e-30 | 120 |
| MS.gene018396.t1 | AT1G60050 | 27.463 | 335 | 228 | 6 | 23 | 344 | 27 | 359 | 3.94e-30 | 119 |
| MS.gene018396.t1 | AT3G45870 | 29.904 | 311 | 195 | 7 | 11 | 305 | 14 | 317 | 2.76e-29 | 115 |
| MS.gene018396.t1 | AT4G19185 | 28.173 | 323 | 208 | 5 | 27 | 332 | 39 | 354 | 7.26e-29 | 116 |
| MS.gene018396.t1 | AT1G43650 | 32.203 | 236 | 153 | 3 | 11 | 245 | 9 | 238 | 3.65e-28 | 111 |
| MS.gene018396.t1 | AT3G28070 | 31.797 | 217 | 142 | 3 | 94 | 305 | 99 | 314 | 1.01e-27 | 111 |
| MS.gene018396.t1 | AT3G28130 | 28.879 | 232 | 154 | 4 | 126 | 349 | 2 | 230 | 6.47e-27 | 107 |
| MS.gene018396.t1 | AT3G28070 | 30.222 | 225 | 148 | 4 | 126 | 345 | 2 | 222 | 8.38e-27 | 107 |
| MS.gene018396.t1 | AT4G16620 | 31.655 | 278 | 151 | 8 | 99 | 356 | 3 | 261 | 1.83e-26 | 106 |
| MS.gene018396.t1 | AT4G16620 | 31.655 | 278 | 151 | 8 | 99 | 356 | 3 | 261 | 1.83e-26 | 106 |
| MS.gene018396.t1 | AT2G37450 | 29.825 | 228 | 146 | 5 | 125 | 347 | 62 | 280 | 3.01e-26 | 107 |
| MS.gene018396.t1 | AT4G19185 | 28.679 | 265 | 168 | 4 | 85 | 332 | 16 | 276 | 4.13e-26 | 107 |
| MS.gene018396.t1 | AT4G24980 | 28.155 | 309 | 141 | 9 | 23 | 324 | 1 | 235 | 1.91e-25 | 104 |
| MS.gene018396.t1 | AT4G01450 | 30.837 | 227 | 148 | 4 | 1 | 225 | 1 | 220 | 6.66e-24 | 99.4 |
| MS.gene018396.t1 | AT3G28080 | 29.302 | 215 | 143 | 4 | 126 | 335 | 2 | 212 | 1.16e-23 | 98.2 |
| MS.gene018396.t1 | AT5G45370 | 26.429 | 280 | 178 | 7 | 96 | 356 | 2 | 272 | 6.59e-23 | 97.4 |
| MS.gene018396.t1 | AT5G45370 | 26.429 | 280 | 178 | 7 | 96 | 356 | 2 | 272 | 6.59e-23 | 97.4 |
| MS.gene018396.t1 | AT4G08290 | 29.921 | 254 | 160 | 6 | 11 | 255 | 15 | 259 | 7.46e-23 | 97.4 |
| MS.gene018396.t1 | AT3G45870 | 30.120 | 249 | 153 | 5 | 11 | 244 | 14 | 256 | 8.20e-22 | 94.4 |
| MS.gene018396.t1 | AT3G28080 | 28.279 | 244 | 114 | 5 | 96 | 335 | 9 | 195 | 7.85e-21 | 90.1 |
| MS.gene018396.t1 | AT3G28080 | 27.491 | 291 | 131 | 8 | 57 | 335 | 62 | 284 | 4.06e-20 | 90.1 |
| MS.gene018396.t1 | AT3G45870 | 28.959 | 221 | 137 | 6 | 118 | 322 | 43 | 259 | 2.32e-18 | 85.1 |
| MS.gene018396.t1 | AT5G45370 | 24.800 | 250 | 160 | 7 | 126 | 356 | 74 | 314 | 1.05e-15 | 77.8 |
| MS.gene018396.t1 | AT4G16620 | 31.720 | 186 | 114 | 3 | 34 | 214 | 37 | 214 | 4.90e-14 | 72.0 |
| MS.gene018396.t1 | AT3G28100 | 32.484 | 157 | 100 | 3 | 94 | 245 | 96 | 251 | 7.26e-14 | 71.6 |
| MS.gene018396.t1 | AT3G28130 | 27.607 | 163 | 114 | 2 | 94 | 252 | 95 | 257 | 6.51e-13 | 68.6 |
| MS.gene018396.t1 | AT3G45870 | 28.061 | 196 | 121 | 6 | 126 | 305 | 51 | 242 | 9.07e-13 | 68.2 |
| MS.gene018396.t1 | AT3G45870 | 28.061 | 196 | 121 | 6 | 126 | 305 | 51 | 242 | 9.07e-13 | 68.2 |
| MS.gene018396.t1 | AT3G28100 | 32.692 | 156 | 97 | 3 | 94 | 245 | 96 | 247 | 4.92e-12 | 65.9 |
| MS.gene018396.t1 | AT3G45870 | 28.161 | 174 | 114 | 5 | 156 | 322 | 14 | 183 | 8.87e-12 | 64.7 |
Find 74 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTATTTGCAGCAATTT+TGG | 0.062039 | 8.2:-4868885 | MS.gene018396:CDS |
| TTCAGTTTGGTAGGGGCTTT+TGG | 0.178567 | 8.2:-4867819 | MS.gene018396:intron |
| AGAAACGTGGCAAAGATATT+AGG | 0.189542 | 8.2:-4868699 | MS.gene018396:CDS |
| ATGTTTATGACCTCTCTTAT+TGG | 0.223884 | 8.2:-4869097 | MS.gene018396:CDS |
| TGGAGATGATACTTGGATTC+TGG | 0.226586 | 8.2:-4868568 | MS.gene018396:CDS |
| TTTAGTCTCATCAAAGTCTT+TGG | 0.286160 | 8.2:+4867758 | None:intergenic |
| ATTCTGACTTATCTGTTAGA+AGG | 0.294692 | 8.2:+4867670 | None:intergenic |
| ATTCAGTCCTGGTGCATATC+AGG | 0.317727 | 8.2:-4868106 | MS.gene018396:CDS |
| TGTTTATGACCTCTCTTATT+GGG | 0.323265 | 8.2:-4869096 | MS.gene018396:intron |
| CACAAAATGGGTGGTTTAGA+TGG | 0.327452 | 8.2:-4869442 | None:intergenic |
| ACAAGAGCTGCTCTATTAGA+TGG | 0.337322 | 8.2:-4869358 | MS.gene018396:CDS |
| AAGAGGAGAATCTTCAAGTA+TGG | 0.355050 | 8.2:-4868296 | MS.gene018396:CDS |
| CAATGTATAACTCTTCTTGT+AGG | 0.355635 | 8.2:+4868011 | None:intergenic |
| CTTACAGTAATGGTTATGAT+AGG | 0.367931 | 8.2:-4869415 | MS.gene018396:CDS |
| AATAAGTAATAGGATAGATT+TGG | 0.374484 | 8.2:-4867700 | MS.gene018396:CDS |
| TCCACTTGCAGTGAGATGTT+TGG | 0.383985 | 8.2:+4868587 | None:intergenic |
| GCAGTGAGATGTTTGGAATC+AGG | 0.387074 | 8.2:+4868594 | None:intergenic |
| TTTGAGAAATGCCATGGTTA+AGG | 0.391804 | 8.2:+4868653 | None:intergenic |
| AGGATGATGAAATAAGTAAT+AGG | 0.399706 | 8.2:-4867710 | MS.gene018396:CDS |
| CCACAGTCTTTGTTGTGTAT+AGG | 0.403014 | 8.2:-4869327 | MS.gene018396:CDS |
| GAAACGTGGCAAAGATATTA+GGG | 0.403244 | 8.2:-4868698 | MS.gene018396:CDS |
| CTGCAAGTGGAGATGATACT+TGG | 0.425884 | 8.2:-4868575 | MS.gene018396:CDS |
| GGAGATGATACTTGGATTCT+GGG | 0.425968 | 8.2:-4868567 | MS.gene018396:CDS |
| TTCTGACTTATCTGTTAGAA+GGG | 0.439173 | 8.2:+4867671 | None:intergenic |
| TTATTTGATGAAAAGATGAT+AGG | 0.443878 | 8.2:+4869277 | None:intergenic |
| GCCGATTTCTTCATCCTGTC+CGG | 0.445443 | 8.2:-4868388 | MS.gene018396:CDS |
| AGCTACTGTCATCACAGCTT+TGG | 0.447218 | 8.2:-4868047 | MS.gene018396:CDS |
| TCATCCATTTCAGTTTGGTA+GGG | 0.451556 | 8.2:-4867827 | MS.gene018396:intron |
| CTAGCTTCTTCATTCAGTCC+TGG | 0.455175 | 8.2:-4868117 | MS.gene018396:CDS |
| GGTTGAACATTACACAATAC+AGG | 0.477467 | 8.2:+4868074 | None:intergenic |
| AGGCATAGCCACTTTGGCAT+TGG | 0.478172 | 8.2:-4869302 | MS.gene018396:CDS |
| CATCCATTTCAGTTTGGTAG+GGG | 0.480532 | 8.2:-4867826 | MS.gene018396:intron |
| GTGGTTTGTATATTGTGCTA+TGG | 0.486759 | 8.2:-4867788 | MS.gene018396:CDS |
| AGATGGTTATCTTACAGTAA+TGG | 0.489887 | 8.2:-4869425 | MS.gene018396:CDS |
| TGGTTTGTATATTGTGCTAT+GGG | 0.491355 | 8.2:-4867787 | MS.gene018396:CDS |
| AAAGTCGATAATATATGATC+CGG | 0.500385 | 8.2:+4868369 | None:intergenic |
| TAGGCAAGGCATAGCCACTT+TGG | 0.512689 | 8.2:-4869308 | MS.gene018396:CDS |
| TCATCCTGCATTTGTGATTG+TGG | 0.514775 | 8.2:+4867726 | None:intergenic |
| TTTATTCTATGCTTCTTCTA+CGG | 0.516850 | 8.2:-4868945 | MS.gene018396:CDS |
| TCCGGACAGGATGAAGAAAT+CGG | 0.517527 | 8.2:+4868387 | None:intergenic |
| CGATAATATATGATCCGGAC+AGG | 0.524346 | 8.2:+4868374 | None:intergenic |
| ATCATCCATTTCAGTTTGGT+AGG | 0.527344 | 8.2:-4867828 | MS.gene018396:intron |
| GTCTTTGTTGTGTATAGGCA+AGG | 0.528821 | 8.2:-4869322 | MS.gene018396:CDS |
| TCCAAACATCTCACTGCAAG+TGG | 0.528954 | 8.2:-4868588 | MS.gene018396:CDS |
| GCTACCACAATCACAAATGC+AGG | 0.537389 | 8.2:-4867730 | MS.gene018396:CDS |
| GCAAATACAAAGGTTAATGC+AGG | 0.537415 | 8.2:+4868896 | None:intergenic |
| CTACAAGAAGAGTTATACAT+TGG | 0.540322 | 8.2:-4868010 | MS.gene018396:CDS |
| AAACTGCATGAAATTTGTAA+AGG | 0.542858 | 8.2:+4868261 | None:intergenic |
| AAGAAGAGTTATACATTGGA+AGG | 0.556408 | 8.2:-4868006 | MS.gene018396:intron |
| ATTTCCTTTGAGAAATGCCA+TGG | 0.560886 | 8.2:+4868647 | None:intergenic |
| TGCAGGTATCAAATTACTCA+TGG | 0.563637 | 8.2:+4868913 | None:intergenic |
| TCCTGGTGCATATCAGGAAG+AGG | 0.567080 | 8.2:-4868100 | MS.gene018396:CDS |
| TTAACCATGGCATTTCTCAA+AGG | 0.576574 | 8.2:-4868651 | MS.gene018396:CDS |
| ACCTCTTCCTGATATGCACC+AGG | 0.580892 | 8.2:+4868099 | None:intergenic |
| TAGAGCAGCTCTTGTAAACA+TGG | 0.582032 | 8.2:+4869366 | None:intergenic |
| TATATTTGCACTGATCAAAG+AGG | 0.589339 | 8.2:-4868313 | MS.gene018396:CDS |
| TATCAAATTACTCATGGCAG+TGG | 0.593988 | 8.2:+4868919 | None:intergenic |
| GGGACAATATGTTGTGTCAG+TGG | 0.597289 | 8.2:-4868678 | MS.gene018396:CDS |
| CTGTGATGACAGTAGCTAGA+GGG | 0.598316 | 8.2:+4868053 | None:intergenic |
| TCTGACTTATCTGTTAGAAG+GGG | 0.613530 | 8.2:+4867672 | None:intergenic |
| TCTTCGAAGTTTAAGAAACG+TGG | 0.615082 | 8.2:-4868712 | MS.gene018396:CDS |
| CAAAATTGCTGCAAATACAA+AGG | 0.620193 | 8.2:+4868886 | None:intergenic |
| GATAGGTGCCAATGCCAAAG+TGG | 0.627922 | 8.2:+4869294 | None:intergenic |
| ATATATAGCAGAGAGCAAGA+TGG | 0.639335 | 8.2:-4867649 | MS.gene018396:CDS |
| CCTATACACAACAAAGACTG+TGG | 0.643809 | 8.2:+4869327 | None:intergenic |
| CTATACACAACAAAGACTGT+GGG | 0.650549 | 8.2:+4869328 | None:intergenic |
| GTCATGTTGGATGATCATGC+AGG | 0.660106 | 8.2:-4868511 | MS.gene018396:intron |
| CAAACTATACCCAATAAGAG+AGG | 0.666012 | 8.2:+4869087 | None:intergenic |
| GTTGAACATTACACAATACA+GGG | 0.675633 | 8.2:+4868075 | None:intergenic |
| AGACAACAGCACAAAATGGG+TGG | 0.676754 | 8.2:-4869451 | None:intergenic |
| TGTCAGTGGAGCCTTAACCA+TGG | 0.706104 | 8.2:-4868664 | MS.gene018396:CDS |
| GCTGTGATGACAGTAGCTAG+AGG | 0.719243 | 8.2:+4868052 | None:intergenic |
| TTGAACATTACACAATACAG+GGG | 0.751249 | 8.2:+4868076 | None:intergenic |
| GGTTTGTATATTGTGCTATG+GGG | 0.751530 | 8.2:-4867786 | MS.gene018396:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATTATTAGTTC+TGG | + | chr8.2:4868608-4868627 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTATTTTGTTGT+AGG | - | chr8.2:4867912-4867931 | MS.gene018396:intron | 10.0% |
| !! | CATATATGATATATATGAAA+AGG | + | chr8.2:4867888-4867907 | None:intergenic | 15.0% |
| !! | AATAACTGTATTATTGTGTA+TGG | - | chr8.2:4869209-4869228 | MS.gene018396:intron | 20.0% |
| !! | AATAAGTAATAGGATAGATT+TGG | - | chr8.2:4869377-4869396 | MS.gene018396:CDS | 20.0% |
| !! | ACAATATTATTGTTCATCAA+TGG | - | chr8.2:4868639-4868658 | MS.gene018396:CDS | 20.0% |
| !! | TATGATATATATGAAAAGGT+AGG | + | chr8.2:4867884-4867903 | None:intergenic | 20.0% |
| !! | TATTAATCATACAACTATAC+AGG | + | chr8.2:4869174-4869193 | None:intergenic | 20.0% |
| !! | TTATTTGATGAAAAGATGAT+AGG | + | chr8.2:4867803-4867822 | None:intergenic | 20.0% |
| !!! | ATCATATATTATCGACTTTT+TGG | - | chr8.2:4868712-4868731 | MS.gene018396:CDS | 20.0% |
| !!! | TTTAAGAGTATTTTTCATGA+CGG | + | chr8.2:4869135-4869154 | None:intergenic | 20.0% |
| ! | AAACTGCATGAAATTTGTAA+AGG | + | chr8.2:4868819-4868838 | None:intergenic | 25.0% |
| ! | AAAGTCGATAATATATGATC+CGG | + | chr8.2:4868711-4868730 | None:intergenic | 25.0% |
| ! | ACTCTTAAATCTAACTTTGA+GGG | - | chr8.2:4869146-4869165 | MS.gene018396:CDS | 25.0% |
| ! | AGGATGATGAAATAAGTAAT+AGG | - | chr8.2:4869367-4869386 | MS.gene018396:CDS | 25.0% |
| ! | TACTCTTAAATCTAACTTTG+AGG | - | chr8.2:4869145-4869164 | MS.gene018396:CDS | 25.0% |
| ! | TATAATTGGTTATACATGCA+GGG | - | chr8.2:4868078-4868097 | MS.gene018396:CDS | 25.0% |
| ! | TTATAATTGGTTATACATGC+AGG | - | chr8.2:4868077-4868096 | MS.gene018396:CDS | 25.0% |
| ! | TTTATTCTATGCTTCTTCTA+CGG | - | chr8.2:4868132-4868151 | MS.gene018396:CDS | 25.0% |
| ! | TTTGATTAAACTTTCAACAC+AGG | - | chr8.2:4868665-4868684 | MS.gene018396:CDS | 25.0% |
| !! | AACAAAAGCATAAGAATCAA+AGG | + | chr8.2:4868023-4868042 | None:intergenic | 25.0% |
| !! | ACAAATTGAAATGTTTCTGA+GGG | + | chr8.2:4868866-4868885 | None:intergenic | 25.0% |
| !! | TACAAATTGAAATGTTTCTG+AGG | + | chr8.2:4868867-4868886 | None:intergenic | 25.0% |
| !! | TCATCTTTTCATCAAATAAG+CGG | - | chr8.2:4867804-4867823 | MS.gene018396:CDS | 25.0% |
| !! | TTTGTATTTGCAGCAATTTT+GGG | - | chr8.2:4868193-4868212 | MS.gene018396:intron | 25.0% |
| !!! | AATCAGAATGCATATTTTAG+TGG | - | chr8.2:4868109-4868128 | MS.gene018396:CDS | 25.0% |
| !!! | CTGTATTTTTTTGTGATACA+GGG | - | chr8.2:4868923-4868942 | MS.gene018396:CDS | 25.0% |
| !!! | TCTGTATTTTTTTGTGATAC+AGG | - | chr8.2:4868922-4868941 | MS.gene018396:CDS | 25.0% |
| AAACAAATACTACTGCAACT+AGG | + | chr8.2:4868280-4868299 | None:intergenic | 30.0% | |
| AAGAAGAGTTATACATTGGA+AGG | - | chr8.2:4869071-4869090 | MS.gene018396:intron | 30.0% | |
| ACAAGAAGAATGAGAGTAAT+TGG | + | chr8.2:4867860-4867879 | None:intergenic | 30.0% | |
| AGATGGTTATCTTACAGTAA+TGG | - | chr8.2:4867652-4867671 | MS.gene018396:CDS | 30.0% | |
| AGTAATTGGTTAAGATCAGA+GGG | + | chr8.2:4867846-4867865 | None:intergenic | 30.0% | |
| ATGTTTATGACCTCTCTTAT+TGG | - | chr8.2:4867980-4867999 | MS.gene018396:intron | 30.0% | |
| ATTCTGACTTATCTGTTAGA+AGG | + | chr8.2:4869410-4869429 | None:intergenic | 30.0% | |
| CAAAATTGCTGCAAATACAA+AGG | + | chr8.2:4868194-4868213 | None:intergenic | 30.0% | |
| CAATGTATAACTCTTCTTGT+AGG | + | chr8.2:4869069-4869088 | None:intergenic | 30.0% | |
| CTACAAGAAGAGTTATACAT+TGG | - | chr8.2:4869067-4869086 | MS.gene018396:intron | 30.0% | |
| CTTACAGTAATGGTTATGAT+AGG | - | chr8.2:4867662-4867681 | MS.gene018396:CDS | 30.0% | |
| GTTGAACATTACACAATACA+GGG | + | chr8.2:4869005-4869024 | None:intergenic | 30.0% | |
| TGTTTATGACCTCTCTTATT+GGG | - | chr8.2:4867981-4868000 | MS.gene018396:intron | 30.0% | |
| TTCATCAAATAAGCGGTAAT+TGG | - | chr8.2:4867811-4867830 | MS.gene018396:CDS | 30.0% | |
| TTCTGACTTATCTGTTAGAA+GGG | + | chr8.2:4869409-4869428 | None:intergenic | 30.0% | |
| TTGAACATTACACAATACAG+GGG | + | chr8.2:4869004-4869023 | None:intergenic | 30.0% | |
| TTTAGTCTCATCAAAGTCTT+TGG | + | chr8.2:4869322-4869341 | None:intergenic | 30.0% | |
| ! | AAATAAGCTTTTACACATGG+AGG | - | chr8.2:4868449-4868468 | MS.gene018396:intron | 30.0% |
| ! | AGGAAATAAGCTTTTACACA+TGG | - | chr8.2:4868446-4868465 | MS.gene018396:intron | 30.0% |
| ! | ATGCAATGAATGACATTTTC+TGG | - | chr8.2:4868312-4868331 | MS.gene018396:CDS | 30.0% |
| ! | CTTTGTATTTGCAGCAATTT+TGG | - | chr8.2:4868192-4868211 | MS.gene018396:intron | 30.0% |
| ! | TATATTTGCACTGATCAAAG+AGG | - | chr8.2:4868764-4868783 | MS.gene018396:intron | 30.0% |
| ! | TGGTTTGTATATTGTGCTAT+GGG | - | chr8.2:4869290-4869309 | MS.gene018396:CDS | 30.0% |
| ! | TTGTAGGAGACAATCTTTTA+AGG | - | chr8.2:4867928-4867947 | MS.gene018396:intron | 30.0% |
| ! | TTGTATTTGCAGCAATTTTG+GGG | - | chr8.2:4868194-4868213 | MS.gene018396:intron | 30.0% |
| !!! | CAATCTTTTAAGGCTTCATT+AGG | - | chr8.2:4867938-4867957 | MS.gene018396:intron | 30.0% |
| !!! | TCTTAGCAAGTAGTGTTTTT+TGG | - | chr8.2:4868544-4868563 | MS.gene018396:CDS | 30.0% |
| !!! | TTTTTTGTGATACAGGGAAT+TGG | - | chr8.2:4868929-4868948 | MS.gene018396:CDS | 30.0% |
| AAGAGGAGAATCTTCAAGTA+TGG | - | chr8.2:4868781-4868800 | MS.gene018396:intron | 35.0% | |
| AGAAACGTGGCAAAGATATT+AGG | - | chr8.2:4868378-4868397 | MS.gene018396:CDS | 35.0% | |
| ATATATAGCAGAGAGCAAGA+TGG | - | chr8.2:4869428-4869447 | MS.gene018396:CDS | 35.0% | |
| ATATGCAGTAAGTCTCTAAC+AGG | - | chr8.2:4868839-4868858 | MS.gene018396:intron | 35.0% | |
| ATCATCCATTTCAGTTTGGT+AGG | - | chr8.2:4869249-4869268 | MS.gene018396:intron | 35.0% | |
| ATGCATCATCCATTTCAGTT+TGG | - | chr8.2:4869245-4869264 | MS.gene018396:intron | 35.0% | |
| CAAACTATACCCAATAAGAG+AGG | + | chr8.2:4867993-4868012 | None:intergenic | 35.0% | |
| CTATACACAACAAAGACTGT+GGG | + | chr8.2:4867752-4867771 | None:intergenic | 35.0% | |
| GAAACGTGGCAAAGATATTA+GGG | - | chr8.2:4868379-4868398 | MS.gene018396:CDS | 35.0% | |
| GAGTAATTGGTTAAGATCAG+AGG | + | chr8.2:4867847-4867866 | None:intergenic | 35.0% | |
| GCAAATACAAAGGTTAATGC+AGG | + | chr8.2:4868184-4868203 | None:intergenic | 35.0% | |
| GGTTGAACATTACACAATAC+AGG | + | chr8.2:4869006-4869025 | None:intergenic | 35.0% | |
| GGTTTGTATATTGTGCTATG+GGG | - | chr8.2:4869291-4869310 | MS.gene018396:CDS | 35.0% | |
| TATCAAATTACTCATGGCAG+TGG | + | chr8.2:4868161-4868180 | None:intergenic | 35.0% | |
| TCATCCATTTCAGTTTGGTA+GGG | - | chr8.2:4869250-4869269 | MS.gene018396:intron | 35.0% | |
| TCTGACTTATCTGTTAGAAG+GGG | + | chr8.2:4869408-4869427 | None:intergenic | 35.0% | |
| TCTTCGAAGTTTAAGAAACG+TGG | - | chr8.2:4868365-4868384 | MS.gene018396:CDS | 35.0% | |
| TGCAGGTATCAAATTACTCA+TGG | + | chr8.2:4868167-4868186 | None:intergenic | 35.0% | |
| TTAACCATGGCATTTCTCAA+AGG | - | chr8.2:4868426-4868445 | MS.gene018396:intron | 35.0% | |
| TTTGAGAAATGCCATGGTTA+AGG | + | chr8.2:4868427-4868446 | None:intergenic | 35.0% | |
| ! | ATTTCCTTTGAGAAATGCCA+TGG | + | chr8.2:4868433-4868452 | None:intergenic | 35.0% |
| ! | GTGGTTTGTATATTGTGCTA+TGG | - | chr8.2:4869289-4869308 | MS.gene018396:CDS | 35.0% |
| !!! | GTAGTGTTTTTTGGTCATGT+TGG | - | chr8.2:4868553-4868572 | MS.gene018396:CDS | 35.0% |
| ACAAGAGCTGCTCTATTAGA+TGG | - | chr8.2:4867719-4867738 | MS.gene018396:CDS | 40.0% | |
| CATCCATTTCAGTTTGGTAG+GGG | - | chr8.2:4869251-4869270 | MS.gene018396:intron | 40.0% | |
| CCTATACACAACAAAGACTG+TGG | + | chr8.2:4867753-4867772 | None:intergenic | 40.0% | |
| CGATAATATATGATCCGGAC+AGG | + | chr8.2:4868706-4868725 | None:intergenic | 40.0% | |
| GGAGATGATACTTGGATTCT+GGG | - | chr8.2:4868510-4868529 | MS.gene018396:intron | 40.0% | |
| TAGAGCAGCTCTTGTAAACA+TGG | + | chr8.2:4867714-4867733 | None:intergenic | 40.0% | |
| TCATCCTGCATTTGTGATTG+TGG | + | chr8.2:4869354-4869373 | None:intergenic | 40.0% | |
| TGGAGATGATACTTGGATTC+TGG | - | chr8.2:4868509-4868528 | MS.gene018396:intron | 40.0% | |
| ! | CCACAGTCTTTGTTGTGTAT+AGG | - | chr8.2:4867750-4867769 | MS.gene018396:CDS | 40.0% |
| ! | GTCTTTGTTGTGTATAGGCA+AGG | - | chr8.2:4867755-4867774 | MS.gene018396:CDS | 40.0% |
| AAGCCCCTACCAAACTGAAA+TGG | + | chr8.2:4869257-4869276 | None:intergenic | 45.0% | |
| AGCTACTGTCATCACAGCTT+TGG | - | chr8.2:4869030-4869049 | MS.gene018396:intron | 45.0% | |
| ATTCAGTCCTGGTGCATATC+AGG | - | chr8.2:4868971-4868990 | MS.gene018396:CDS | 45.0% | |
| CTAGCTTCTTCATTCAGTCC+TGG | - | chr8.2:4868960-4868979 | MS.gene018396:CDS | 45.0% | |
| CTGCAAGTGGAGATGATACT+TGG | - | chr8.2:4868502-4868521 | MS.gene018396:intron | 45.0% | |
| CTGTGATGACAGTAGCTAGA+GGG | + | chr8.2:4869027-4869046 | None:intergenic | 45.0% | |
| GCTACCACAATCACAAATGC+AGG | - | chr8.2:4869347-4869366 | MS.gene018396:CDS | 45.0% | |
| GGGACAATATGTTGTGTCAG+TGG | - | chr8.2:4868399-4868418 | MS.gene018396:intron | 45.0% | |
| GTCATGTTGGATGATCATGC+AGG | - | chr8.2:4868566-4868585 | MS.gene018396:CDS | 45.0% | |
| TCCAAACATCTCACTGCAAG+TGG | - | chr8.2:4868489-4868508 | MS.gene018396:intron | 45.0% | |
| TCCACTTGCAGTGAGATGTT+TGG | + | chr8.2:4868493-4868512 | None:intergenic | 45.0% | |
| TCCGGACAGGATGAAGAAAT+CGG | + | chr8.2:4868693-4868712 | None:intergenic | 45.0% | |
| ! | GCAGTGAGATGTTTGGAATC+AGG | + | chr8.2:4868486-4868505 | None:intergenic | 45.0% |
| ! | TTCAGTTTGGTAGGGGCTTT+TGG | - | chr8.2:4869258-4869277 | MS.gene018396:intron | 45.0% |
| !! | AATAATAATAATAATCTTAT+AGG | - | chr8.2:4868613-4868632 | MS.gene018396:CDS | 5.0% |
| !! | ACAAAATAAATAATTATAAT+TGG | - | chr8.2:4868064-4868083 | MS.gene018396:CDS | 5.0% |
| !! | ATAATAATAATAATCTTATA+GGG | - | chr8.2:4868614-4868633 | MS.gene018396:CDS | 5.0% |
| ACCTCTTCCTGATATGCACC+AGG | + | chr8.2:4868981-4869000 | None:intergenic | 50.0% | |
| GATAGGTGCCAATGCCAAAG+TGG | + | chr8.2:4867786-4867805 | None:intergenic | 50.0% | |
| GATGATGCATGTGAGCGAGT+AGG | + | chr8.2:4869235-4869254 | None:intergenic | 50.0% | |
| GCTGTGATGACAGTAGCTAG+AGG | + | chr8.2:4869028-4869047 | None:intergenic | 50.0% | |
| TAGGCAAGGCATAGCCACTT+TGG | - | chr8.2:4867769-4867788 | MS.gene018396:CDS | 50.0% | |
| TCCTGGTGCATATCAGGAAG+AGG | - | chr8.2:4868977-4868996 | MS.gene018396:CDS | 50.0% | |
| TGTCAGTGGAGCCTTAACCA+TGG | - | chr8.2:4868413-4868432 | MS.gene018396:intron | 50.0% | |
| ! | AGGCATAGCCACTTTGGCAT+TGG | - | chr8.2:4867775-4867794 | MS.gene018396:CDS | 50.0% |
| ! | GCCGATTTCTTCATCCTGTC+CGG | - | chr8.2:4868689-4868708 | MS.gene018396:CDS | 50.0% |
| !!! | GGGGCTTTTGGAGTGATAAG+TGG | - | chr8.2:4869270-4869289 | MS.gene018396:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 4867641 | 4869458 | 4867641 | ID=MS.gene018396 |
| chr8.2 | mRNA | 4867641 | 4869458 | 4867641 | ID=MS.gene018396.t1;Parent=MS.gene018396 |
| chr8.2 | exon | 4869274 | 4869458 | 4869274 | ID=MS.gene018396.t1.exon1;Parent=MS.gene018396.t1 |
| chr8.2 | CDS | 4869274 | 4869458 | 4869274 | ID=cds.MS.gene018396.t1;Parent=MS.gene018396.t1 |
| chr8.2 | exon | 4869097 | 4869165 | 4869097 | ID=MS.gene018396.t1.exon2;Parent=MS.gene018396.t1 |
| chr8.2 | CDS | 4869097 | 4869165 | 4869097 | ID=cds.MS.gene018396.t1;Parent=MS.gene018396.t1 |
| chr8.2 | exon | 4868884 | 4869000 | 4868884 | ID=MS.gene018396.t1.exon3;Parent=MS.gene018396.t1 |
| chr8.2 | CDS | 4868884 | 4869000 | 4868884 | ID=cds.MS.gene018396.t1;Parent=MS.gene018396.t1 |
| chr8.2 | exon | 4868512 | 4868749 | 4868512 | ID=MS.gene018396.t1.exon4;Parent=MS.gene018396.t1 |
| chr8.2 | CDS | 4868512 | 4868749 | 4868512 | ID=cds.MS.gene018396.t1;Parent=MS.gene018396.t1 |
| chr8.2 | exon | 4868254 | 4868412 | 4868254 | ID=MS.gene018396.t1.exon5;Parent=MS.gene018396.t1 |
| chr8.2 | CDS | 4868254 | 4868412 | 4868254 | ID=cds.MS.gene018396.t1;Parent=MS.gene018396.t1 |
| chr8.2 | exon | 4868007 | 4868155 | 4868007 | ID=MS.gene018396.t1.exon6;Parent=MS.gene018396.t1 |
| chr8.2 | CDS | 4868007 | 4868155 | 4868007 | ID=cds.MS.gene018396.t1;Parent=MS.gene018396.t1 |
| chr8.2 | exon | 4867641 | 4867836 | 4867641 | ID=MS.gene018396.t1.exon7;Parent=MS.gene018396.t1 |
| chr8.2 | CDS | 4867641 | 4867836 | 4867641 | ID=cds.MS.gene018396.t1;Parent=MS.gene018396.t1 |
| Gene Sequence |
| Protein sequence |
