Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28855.t1 | XP_003601157.1 | 97.8 | 403 | 7 | 1 | 1 | 401 | 1 | 403 | 4.40E-221 | 776.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28855.t1 | Q9C6Z3 | 80.8 | 411 | 64 | 4 | 1 | 401 | 1 | 406 | 2.6e-185 | 649.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28855.t1 | G7J483 | 97.8 | 403 | 7 | 1 | 1 | 401 | 1 | 403 | 3.2e-221 | 776.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80759 | MS.gene28855 | PPI |
| MS.gene073516 | MS.gene28855 | PPI |
| MS.gene037762 | MS.gene28855 | PPI |
| MS.gene81790 | MS.gene28855 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28855.t1 | MTR_3g076630 | 97.767 | 403 | 7 | 1 | 1 | 401 | 1 | 403 | 0.0 | 811 |
| MS.gene28855.t1 | MTR_7g005380 | 40.483 | 331 | 193 | 1 | 75 | 401 | 22 | 352 | 1.19e-87 | 270 |
| MS.gene28855.t1 | MTR_4g021470 | 37.459 | 307 | 189 | 3 | 72 | 376 | 29 | 334 | 2.43e-61 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28855.t1 | AT1G30120 | 80.779 | 411 | 64 | 4 | 1 | 401 | 1 | 406 | 0.0 | 676 |
| MS.gene28855.t1 | AT2G34590 | 81.818 | 407 | 67 | 4 | 1 | 401 | 1 | 406 | 0.0 | 675 |
| MS.gene28855.t1 | AT5G50850 | 39.045 | 356 | 204 | 2 | 58 | 400 | 4 | 359 | 1.95e-88 | 272 |
| MS.gene28855.t1 | AT1G55510 | 36.503 | 326 | 201 | 4 | 53 | 376 | 7 | 328 | 7.86e-62 | 203 |
| MS.gene28855.t1 | AT3G13450 | 37.097 | 310 | 192 | 3 | 69 | 376 | 26 | 334 | 1.22e-60 | 200 |
Find 122 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAATTTCCATGACTATT+TGG | 0.148797 | 3.1:+62945985 | MS.gene28855:CDS |
| TTCCACAATTGTTAGAGATT+TGG | 0.278564 | 3.1:-62945430 | None:intergenic |
| CCATTTGATCTTCACACAAT+TGG | 0.288971 | 3.1:+62945872 | MS.gene28855:CDS |
| ACCTTTGGATTGAAAGGAAT+TGG | 0.294117 | 3.1:-62943503 | None:intergenic |
| GCTTCTGCGGCCTCAAAACC+TGG | 0.323426 | 3.1:+62943855 | MS.gene28855:CDS |
| GGCGAAGATGTAGGTCATTA+TGG | 0.341430 | 3.1:+62945236 | MS.gene28855:CDS |
| GGATCCTTGTGTTTGTGTTA+TGG | 0.347565 | 3.1:+62945214 | MS.gene28855:CDS |
| GACCTGATGTCAATTACTTC+AGG | 0.354470 | 3.1:-62945842 | None:intergenic |
| TAACTTACTGCAACTGCATT+AGG | 0.356093 | 3.1:-62943745 | None:intergenic |
| TCTTCCAATGTTCCGGCGTA+TGG | 0.364332 | 3.1:-62946049 | None:intergenic |
| AGCAGAACACTCACAGCGTT+TGG | 0.367856 | 3.1:+62945532 | MS.gene28855:CDS |
| GATCCTTGTGTTTGTGTTAT+GGG | 0.370683 | 3.1:+62945215 | MS.gene28855:CDS |
| ATCTGATGCAAAGGTGAATC+AGG | 0.372147 | 3.1:+62943672 | MS.gene28855:CDS |
| TGTCCATTCTTCCAATGTTC+CGG | 0.376343 | 3.1:-62946056 | None:intergenic |
| CATTTGATCTTCACACAATT+GGG | 0.378344 | 3.1:+62945873 | MS.gene28855:CDS |
| CCAATTGTGTGAAGATCAAA+TGG | 0.384655 | 3.1:-62945872 | None:intergenic |
| CTTCACGGAGGGCTTCAAAA+AGG | 0.390509 | 3.1:-62945169 | None:intergenic |
| GTGAAGGCGTTCTCAGCAAT+AGG | 0.393983 | 3.1:-62945323 | None:intergenic |
| TGTATGCGGACGGGTGGAAT+TGG | 0.402530 | 3.1:+62945938 | MS.gene28855:CDS |
| GAACATGGGATTTCTACTTC+TGG | 0.411008 | 3.1:+62945400 | MS.gene28855:CDS |
| GACAATACATACTCTTCATC+TGG | 0.412124 | 3.1:-62945704 | None:intergenic |
| ATCAAGCCCTTGGCGTTGTA+AGG | 0.414249 | 3.1:-62945605 | None:intergenic |
| TGAAGGTTTGGAAGAAGAAA+TGG | 0.415831 | 3.1:+62945187 | MS.gene28855:CDS |
| CTTCCAATGTTCCGGCGTAT+GGG | 0.418387 | 3.1:-62946048 | None:intergenic |
| TGAAGCCCTCCGTGAAGGTT+TGG | 0.426813 | 3.1:+62945175 | MS.gene28855:CDS |
| TGAAGGCGTTCTCAGCAATA+GGG | 0.426997 | 3.1:-62945322 | None:intergenic |
| CAGCTCCCAATGCTTGGAAA+AGG | 0.429441 | 3.1:-62943459 | None:intergenic |
| AGAAACCTAGCTGAAAAGTT+TGG | 0.429473 | 3.1:+62945278 | MS.gene28855:CDS |
| TATCATATGTTTATCCTCTC+AGG | 0.437493 | 3.1:+62946015 | MS.gene28855:CDS |
| TTGAAGAAGCTGAGATGGTT+AGG | 0.438904 | 3.1:+62945729 | MS.gene28855:CDS |
| AAAATACCAGTTGTCATTCG+TGG | 0.440767 | 3.1:+62945482 | MS.gene28855:CDS |
| GGCATTGGAGCTGCCATGAC+TGG | 0.441530 | 3.1:+62945353 | MS.gene28855:CDS |
| CGCAGCTTTCATCAAGCCCT+TGG | 0.454591 | 3.1:-62945615 | None:intergenic |
| TGAGAGGATAAACATATGAT+AGG | 0.455116 | 3.1:-62946013 | None:intergenic |
| TTTCTTCTTCCAAACCTTCA+CGG | 0.456792 | 3.1:-62945184 | None:intergenic |
| ACCCTGAAGTAATTGACATC+AGG | 0.461035 | 3.1:+62945840 | MS.gene28855:CDS |
| CAAGCCACCATCTGAATACC+AGG | 0.461946 | 3.1:-62945575 | None:intergenic |
| CCCCTTGTTCACTAATGTCT+TGG | 0.463054 | 3.1:-62945813 | None:intergenic |
| TCCAATTCCTTTCAATCCAA+AGG | 0.466235 | 3.1:+62943502 | MS.gene28855:CDS |
| AAACAAACCTTTGGATTGAA+AGG | 0.467045 | 3.1:-62943509 | None:intergenic |
| ATTGCTGAGAACGCCTTCAC+TGG | 0.467578 | 3.1:+62945326 | MS.gene28855:CDS |
| ATGTTCATGCCCTCAATGAT+TGG | 0.468710 | 3.1:-62945383 | None:intergenic |
| GAGAACGCCTTCACTGGAAT+GGG | 0.477855 | 3.1:+62945332 | MS.gene28855:CDS |
| ATTCGTGGCCCCGGTGGAGT+TGG | 0.478046 | 3.1:+62945497 | MS.gene28855:CDS |
| CCGGGGCCACGAATGACAAC+TGG | 0.484379 | 3.1:-62945488 | None:intergenic |
| GCCTTCACTGGAATGGGCAT+TGG | 0.484563 | 3.1:+62945338 | MS.gene28855:CDS |
| GTTTGGTGACCTCAGAGTCT+TGG | 0.486909 | 3.1:+62945295 | MS.gene28855:CDS |
| GGTGGAGTTGGTCGGCAACT+TGG | 0.489359 | 3.1:+62945509 | MS.gene28855:CDS |
| AAGTTGCCGACCAACTCCAC+CGG | 0.491956 | 3.1:-62945507 | None:intergenic |
| TGAGAACGCCTTCACTGGAA+TGG | 0.492235 | 3.1:+62945331 | MS.gene28855:CDS |
| TTCCAATGTTCCGGCGTATG+GGG | 0.493371 | 3.1:-62946047 | None:intergenic |
| TAACAGCAGCTCCCAATGCT+TGG | 0.497792 | 3.1:-62943465 | None:intergenic |
| AGCTCCCAATGCTTGGAAAA+GGG | 0.505657 | 3.1:-62943458 | None:intergenic |
| GACCCCATACGCCGGAACAT+TGG | 0.505847 | 3.1:+62946045 | MS.gene28855:CDS |
| GCTTGGAAAAGGGTCGCCAT+TGG | 0.506284 | 3.1:-62943448 | None:intergenic |
| TTGGATTGAAAGGAATTGGA+TGG | 0.506432 | 3.1:-62943499 | None:intergenic |
| AGGAATTGGATGGAGACAAA+GGG | 0.507813 | 3.1:-62943489 | None:intergenic |
| TCACAATATTAACTTATTCG+AGG | 0.508951 | 3.1:+62945765 | MS.gene28855:CDS |
| AGTTGCCGACCAACTCCACC+GGG | 0.512106 | 3.1:-62945506 | None:intergenic |
| ACCTGATGTCAATTACTTCA+GGG | 0.512110 | 3.1:-62945841 | None:intergenic |
| AACCAAATCTCTAACAATTG+TGG | 0.513777 | 3.1:+62945428 | MS.gene28855:CDS |
| GACGCATCGGGTTCTCATAG+TGG | 0.516325 | 3.1:+62945910 | MS.gene28855:CDS |
| ACGCCGGAACATTGGAAGAA+TGG | 0.522613 | 3.1:+62946053 | MS.gene28855:CDS |
| AATCATTGAGGGCATGAACA+TGG | 0.523509 | 3.1:+62945385 | MS.gene28855:CDS |
| CATCTGGAATTCTTTCCTTG+AGG | 0.526335 | 3.1:-62945688 | None:intergenic |
| AAAACAGGGAAGCAGTTCCC+TGG | 0.532031 | 3.1:+62943833 | MS.gene28855:intron |
| TTCTTCCAAACCTTCACGGA+GGG | 0.533768 | 3.1:-62945180 | None:intergenic |
| ATCAGGAGGAGCAACTCGTA+AGG | 0.536409 | 3.1:+62943705 | MS.gene28855:CDS |
| GGTCTGAGGCCAATCATTGA+GGG | 0.536750 | 3.1:+62945374 | MS.gene28855:CDS |
| TATTAACTTATTCGAGGATG+AGG | 0.538579 | 3.1:+62945771 | MS.gene28855:CDS |
| AATATTGTGACATGCTCACC+AGG | 0.538755 | 3.1:-62945752 | None:intergenic |
| GGAATGCTGCATTACACATC+CGG | 0.540625 | 3.1:+62945449 | MS.gene28855:CDS |
| AATGTTCCGGCGTATGGGGT+CGG | 0.540863 | 3.1:-62946043 | None:intergenic |
| GTCACTTGAAGAAGCTGAGA+TGG | 0.543358 | 3.1:+62945724 | MS.gene28855:CDS |
| TCCAATGCCCATTCCAGTGA+AGG | 0.550685 | 3.1:-62945339 | None:intergenic |
| CCAGTTGTCATTCGTGGCCC+CGG | 0.551669 | 3.1:+62945488 | MS.gene28855:CDS |
| TGCCAAGACATTAGTGAACA+AGG | 0.551975 | 3.1:+62945811 | MS.gene28855:CDS |
| GTGGAGGAGTGTATGCGGAC+GGG | 0.556919 | 3.1:+62945929 | MS.gene28855:CDS |
| GTGGCCCCGGTGGAGTTGGT+CGG | 0.557377 | 3.1:+62945501 | MS.gene28855:CDS |
| TGGTCTGAGGCCAATCATTG+AGG | 0.563346 | 3.1:+62945373 | MS.gene28855:CDS |
| TTCAACACCTTACAACGCCA+AGG | 0.564472 | 3.1:+62945598 | MS.gene28855:CDS |
| AAGGAATTGGATGGAGACAA+AGG | 0.566066 | 3.1:-62943490 | None:intergenic |
| GATTGGCCTCAGACCAGTCA+TGG | 0.570730 | 3.1:-62945366 | None:intergenic |
| TGTGTTATGGGCGAAGATGT+AGG | 0.571870 | 3.1:+62945227 | MS.gene28855:CDS |
| GTTTGGAAGAAGAAATGGAA+AGG | 0.572313 | 3.1:+62945192 | MS.gene28855:CDS |
| AAGCAGTTCCCTGGCTTCTG+CGG | 0.574120 | 3.1:+62943842 | MS.gene28855:CDS |
| ACTGCAGTAACAATTTGAGC+AGG | 0.577645 | 3.1:-62946088 | None:intergenic |
| ATCAATCCCTGGTATTCAGA+TGG | 0.579633 | 3.1:+62945568 | MS.gene28855:CDS |
| TTTGGAAGAAGAAATGGAAA+GGG | 0.583683 | 3.1:+62945193 | MS.gene28855:CDS |
| ATCATTGAGGGCATGAACAT+GGG | 0.584362 | 3.1:+62945386 | MS.gene28855:CDS |
| TAGGAGCATCCAAATAGTCA+TGG | 0.589072 | 3.1:-62945994 | None:intergenic |
| GATGAGGTATCATGTCATGC+AGG | 0.594895 | 3.1:+62945787 | MS.gene28855:CDS |
| AGTGGAGGAGTGTATGCGGA+CGG | 0.600689 | 3.1:+62945928 | MS.gene28855:CDS |
| GAGGAGTGTATGCGGACGGG+TGG | 0.604447 | 3.1:+62945932 | MS.gene28855:CDS |
| TCAACACCTTACAACGCCAA+GGG | 0.608126 | 3.1:+62945599 | MS.gene28855:CDS |
| TAACCGATTTCAGAGAGGAA+AGG | 0.609166 | 3.1:+62943625 | MS.gene28855:intron |
| GCCAAGACATTAGTGAACAA+GGG | 0.615498 | 3.1:+62945812 | MS.gene28855:CDS |
| CTTCTGCGGCCTCAAAACCT+GGG | 0.625772 | 3.1:+62943856 | MS.gene28855:CDS |
| TCAGGAGGAGCAACTCGTAA+GGG | 0.626298 | 3.1:+62943706 | MS.gene28855:CDS |
| GGAATTGGATGGAGACAAAG+GGG | 0.627837 | 3.1:-62943488 | None:intergenic |
| GAAGGCGTTCTCAGCAATAG+GGG | 0.627917 | 3.1:-62945321 | None:intergenic |
| TCATTATGGAGGATCTTACA+AGG | 0.628639 | 3.1:+62945250 | MS.gene28855:CDS |
| GAAGCTGAGATGGTTAGGCC+TGG | 0.629301 | 3.1:+62945734 | MS.gene28855:CDS |
| CCAAGACATTAGTGAACAAG+GGG | 0.633005 | 3.1:+62945813 | MS.gene28855:CDS |
| AATCCCTGGTATTCAGATGG+TGG | 0.638274 | 3.1:+62945571 | MS.gene28855:CDS |
| GAGCTGCCATGACTGGTCTG+AGG | 0.641109 | 3.1:+62945360 | MS.gene28855:CDS |
| GGAGGAGCAACTCGTAAGGG+TGG | 0.658892 | 3.1:+62943709 | MS.gene28855:CDS |
| GTTGTCATTCGTGGCCCCGG+TGG | 0.664280 | 3.1:+62945491 | MS.gene28855:CDS |
| TCATAGTGGAGGAGTGTATG+CGG | 0.664859 | 3.1:+62945924 | MS.gene28855:CDS |
| GCATCGGGTTCTCATAGTGG+AGG | 0.665664 | 3.1:+62945913 | MS.gene28855:CDS |
| CTTCTTCCAAACCTTCACGG+AGG | 0.668917 | 3.1:-62945181 | None:intergenic |
| TGTCAGATCATCTGATGCAA+AGG | 0.673345 | 3.1:+62943663 | MS.gene28855:CDS |
| TAGGGGTGTCCAAGACTCTG+AGG | 0.678864 | 3.1:-62945304 | None:intergenic |
| TGGGGTCGGCACATCCTGAG+AGG | 0.680395 | 3.1:-62946029 | None:intergenic |
| TGATGCAAAGGTGAATCAGG+TGG | 0.683069 | 3.1:+62943675 | MS.gene28855:CDS |
| GATGTGCCGACCCCATACGC+CGG | 0.694965 | 3.1:+62946037 | MS.gene28855:CDS |
| ATGCTGCATTACACATCCGG+AGG | 0.700382 | 3.1:+62945452 | MS.gene28855:CDS |
| GAAGATGTAGGTCATTATGG+AGG | 0.718502 | 3.1:+62945239 | MS.gene28855:CDS |
| TCGCCCATAACACAAACACA+AGG | 0.727801 | 3.1:-62945218 | None:intergenic |
| AACATTGGAAGAATGGACAG+TGG | 0.729198 | 3.1:+62946060 | MS.gene28855:CDS |
| AAGCCACCATCTGAATACCA+GGG | 0.729816 | 3.1:-62945574 | None:intergenic |
| GTTGCCGACCAACTCCACCG+GGG | 0.782401 | 3.1:-62945505 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGATTTTATTGTAATTTT+AGG | - | chr3.1:62944018-62944037 | None:intergenic | 10.0% |
| !! | ATCACAAAATAAAATAGAAA+AGG | - | chr3.1:62944421-62944440 | None:intergenic | 15.0% |
| !! | TTAGAAAATGTAATGAAATA+TGG | + | chr3.1:62944593-62944612 | MS.gene28855:intron | 15.0% |
| !!! | ATTGTGTTTGATTTTTAAAA+AGG | - | chr3.1:62944069-62944088 | None:intergenic | 15.0% |
| !!! | AAATGTTAAATTTTTGTGCA+AGG | + | chr3.1:62944845-62944864 | MS.gene28855:intron | 20.0% |
| !!! | ATAAACTTGTTTTTTGATGT+TGG | + | chr3.1:62943561-62943580 | MS.gene28855:intron | 20.0% |
| !!! | ATTGTAATTTTAGGAAGAAA+AGG | - | chr3.1:62944009-62944028 | None:intergenic | 20.0% |
| !!! | ATTTTATTTTGTGATGAACA+AGG | + | chr3.1:62944426-62944445 | MS.gene28855:intron | 20.0% |
| !!! | CATTTTTTTTTCTCTCTTAT+TGG | + | chr3.1:62945007-62945026 | MS.gene28855:intron | 20.0% |
| !!! | TAAACTTGTTTTTTGATGTT+GGG | + | chr3.1:62943562-62943581 | MS.gene28855:intron | 20.0% |
| !!! | TGTTGGCATTTTTTTTTTAT+TGG | + | chr3.1:62945062-62945081 | MS.gene28855:intron | 20.0% |
| !!! | TGTTTTCTCAAAGTATAAAA+TGG | + | chr3.1:62944377-62944396 | MS.gene28855:intron | 20.0% |
| !!! | TTGTAATTTTAGGAAGAAAA+GGG | - | chr3.1:62944008-62944027 | None:intergenic | 20.0% |
| !!! | TTTTACAAAATACAATGCTT+AGG | - | chr3.1:62944705-62944724 | None:intergenic | 20.0% |
| ! | AATCAAGTTTGAATGAAAAC+AGG | + | chr3.1:62943818-62943837 | MS.gene28855:intron | 25.0% |
| ! | ATCAAGTTTGAATGAAAACA+GGG | + | chr3.1:62943819-62943838 | MS.gene28855:intron | 25.0% |
| ! | ATTCAATAAAAAAGACGCAT+CGG | + | chr3.1:62945897-62945916 | MS.gene28855:CDS | 25.0% |
| ! | ATTGAATAGTTATGACCAAT+AGG | + | chr3.1:62945093-62945112 | MS.gene28855:intron | 25.0% |
| ! | TAAAAAAAAAATGCCAACAC+AGG | - | chr3.1:62945061-62945080 | None:intergenic | 25.0% |
| ! | TCACAATATTAACTTATTCG+AGG | + | chr3.1:62945765-62945784 | MS.gene28855:CDS | 25.0% |
| ! | TGAAAATTTCCATGACTATT+TGG | + | chr3.1:62945985-62946004 | MS.gene28855:CDS | 25.0% |
| ! | TTCTAAATTAAGATATCCTC+CGG | - | chr3.1:62944579-62944598 | None:intergenic | 25.0% |
| ! | TTGCATAAAAAACAAACCTT+TGG | - | chr3.1:62943521-62943540 | None:intergenic | 25.0% |
| !! | TAAACTTCCTTACCTTTTTA+GGG | + | chr3.1:62944214-62944233 | MS.gene28855:intron | 25.0% |
| !!! | AGTCAATTTAGTTCATCTTT+TGG | + | chr3.1:62944342-62944361 | MS.gene28855:intron | 25.0% |
| AAACAAACCTTTGGATTGAA+AGG | - | chr3.1:62943512-62943531 | None:intergenic | 30.0% | |
| AACCAAATCTCTAACAATTG+TGG | + | chr3.1:62945428-62945447 | MS.gene28855:CDS | 30.0% | |
| AATTACACAGAAATGTGGAA+TGG | - | chr3.1:62943789-62943808 | None:intergenic | 30.0% | |
| ACATAACAAGAAGTGATTGT+AGG | - | chr3.1:62943892-62943911 | None:intergenic | 30.0% | |
| CATTTGATCTTCACACAATT+GGG | + | chr3.1:62945873-62945892 | MS.gene28855:CDS | 30.0% | |
| CTAAAAAGGTAAGGAAGTTT+AGG | - | chr3.1:62944215-62944234 | None:intergenic | 30.0% | |
| TATCATATGTTTATCCTCTC+AGG | + | chr3.1:62946015-62946034 | MS.gene28855:CDS | 30.0% | |
| TATTAACTTATTCGAGGATG+AGG | + | chr3.1:62945771-62945790 | MS.gene28855:CDS | 30.0% | |
| TCCCATATGTTAGAAATATC+CGG | + | chr3.1:62944557-62944576 | MS.gene28855:intron | 30.0% | |
| TGAGAGGATAAACATATGAT+AGG | - | chr3.1:62946016-62946035 | None:intergenic | 30.0% | |
| TTCAATAAAAAAGACGCATC+GGG | + | chr3.1:62945898-62945917 | MS.gene28855:CDS | 30.0% | |
| TTCCACAATTGTTAGAGATT+TGG | - | chr3.1:62945433-62945452 | None:intergenic | 30.0% | |
| TTGGTATTGCATACATAGAA+AGG | - | chr3.1:62944516-62944535 | None:intergenic | 30.0% | |
| TTTGGAAGAAGAAATGGAAA+GGG | + | chr3.1:62945193-62945212 | MS.gene28855:CDS | 30.0% | |
| ! | AAACTTCCTTACCTTTTTAG+GGG | + | chr3.1:62944215-62944234 | MS.gene28855:intron | 30.0% |
| ! | CTAAACTTCCTTACCTTTTT+AGG | + | chr3.1:62944213-62944232 | MS.gene28855:intron | 30.0% |
| ! | GTCATGGAAATTTTCAGTAA+TGG | - | chr3.1:62945981-62946000 | None:intergenic | 30.0% |
| ! | TCCGGATATTTCTAACATAT+GGG | - | chr3.1:62944561-62944580 | None:intergenic | 30.0% |
| ! | TGAGTAAAAAAGCACACATA+TGG | - | chr3.1:62944940-62944959 | None:intergenic | 30.0% |
| ! | TGTTTTGCTTTATAACCTCA+AGG | + | chr3.1:62945673-62945692 | MS.gene28855:CDS | 30.0% |
| !! | CAATTTTGTTTGATGAAAGC+AGG | - | chr3.1:62944749-62944768 | None:intergenic | 30.0% |
| !!! | CAATCTATCGCTCTTATTTT+TGG | + | chr3.1:62943538-62943557 | MS.gene28855:intron | 30.0% |
| !!! | GATGTATTGTTGTTTTCAGA+TGG | - | chr3.1:62944460-62944479 | None:intergenic | 30.0% |
| AAAATACCAGTTGTCATTCG+TGG | + | chr3.1:62945482-62945501 | MS.gene28855:CDS | 35.0% | |
| AAAGCTAAGCCTTGAAAAGA+AGG | + | chr3.1:62944165-62944184 | MS.gene28855:intron | 35.0% | |
| AAGCTAAGCCTTGAAAAGAA+GGG | + | chr3.1:62944166-62944185 | MS.gene28855:intron | 35.0% | |
| AATCCATGTTTCATGAGCAA+AGG | + | chr3.1:62944881-62944900 | MS.gene28855:intron | 35.0% | |
| ACAAGAAGTGATTGTAGGAT+AGG | - | chr3.1:62943887-62943906 | None:intergenic | 35.0% | |
| ACCTGATGTCAATTACTTCA+GGG | - | chr3.1:62945844-62945863 | None:intergenic | 35.0% | |
| ACCTTTGGATTGAAAGGAAT+TGG | - | chr3.1:62943506-62943525 | None:intergenic | 35.0% | |
| AGAAACCTAGCTGAAAAGTT+TGG | + | chr3.1:62945278-62945297 | MS.gene28855:CDS | 35.0% | |
| ATATGGAAACAACTCCTGTA+TGG | + | chr3.1:62944610-62944629 | MS.gene28855:intron | 35.0% | |
| ATCCATGTTTCATGAGCAAA+GGG | + | chr3.1:62944882-62944901 | MS.gene28855:intron | 35.0% | |
| ATTACATCACAACTACATCC+TGG | - | chr3.1:62944321-62944340 | None:intergenic | 35.0% | |
| CAAACAAAATTGAGCTCTTG+TGG | + | chr3.1:62944757-62944776 | MS.gene28855:intron | 35.0% | |
| CATATGTTAGAAATATCCGG+AGG | + | chr3.1:62944560-62944579 | MS.gene28855:intron | 35.0% | |
| CATTTAGAAGACTGAAAGCA+TGG | - | chr3.1:62944830-62944849 | None:intergenic | 35.0% | |
| CCAATTGTGTGAAGATCAAA+TGG | - | chr3.1:62945875-62945894 | None:intergenic | 35.0% | |
| CCATTTGATCTTCACACAAT+TGG | + | chr3.1:62945872-62945891 | MS.gene28855:CDS | 35.0% | |
| CTAATATATTCGATCCAGAC+TGG | + | chr3.1:62944034-62944053 | MS.gene28855:intron | 35.0% | |
| CTACATGCCTTATATTCGAT+CGG | + | chr3.1:62944094-62944113 | MS.gene28855:intron | 35.0% | |
| GACAATACATACTCTTCATC+TGG | - | chr3.1:62945707-62945726 | None:intergenic | 35.0% | |
| GACACGATAGTGATATTATG+AGG | + | chr3.1:62944667-62944686 | MS.gene28855:intron | 35.0% | |
| GATCCTTGTGTTTGTGTTAT+GGG | + | chr3.1:62945215-62945234 | MS.gene28855:CDS | 35.0% | |
| GATGCAATTACACAGAAATG+TGG | - | chr3.1:62943794-62943813 | None:intergenic | 35.0% | |
| GTTTGGAAGAAGAAATGGAA+AGG | + | chr3.1:62945192-62945211 | MS.gene28855:CDS | 35.0% | |
| TAACTTACTGCAACTGCATT+AGG | - | chr3.1:62943748-62943767 | None:intergenic | 35.0% | |
| TACATGCCTTATATTCGATC+GGG | + | chr3.1:62944095-62944114 | MS.gene28855:intron | 35.0% | |
| TCATTATGGAGGATCTTACA+AGG | + | chr3.1:62945250-62945269 | MS.gene28855:CDS | 35.0% | |
| TCCAATTCCTTTCAATCCAA+AGG | + | chr3.1:62943502-62943521 | MS.gene28855:CDS | 35.0% | |
| TCTAACATATGGGAAACAGA+TGG | - | chr3.1:62944551-62944570 | None:intergenic | 35.0% | |
| TCTAGACATTTCTACCATAC+AGG | - | chr3.1:62944627-62944646 | None:intergenic | 35.0% | |
| TCTTGTGGTAATTCATGACA+CGG | + | chr3.1:62944772-62944791 | MS.gene28855:intron | 35.0% | |
| TCTTTACCCCTAAAAAGGTA+AGG | - | chr3.1:62944224-62944243 | None:intergenic | 35.0% | |
| TGAAGGTTTGGAAGAAGAAA+TGG | + | chr3.1:62945187-62945206 | MS.gene28855:CDS | 35.0% | |
| TGACCAATAGGCAATAACAA+TGG | + | chr3.1:62945105-62945124 | MS.gene28855:intron | 35.0% | |
| TGTATGGTAGAAATGTCTAG+AGG | + | chr3.1:62944626-62944645 | MS.gene28855:intron | 35.0% | |
| TTGGATTGAAAGGAATTGGA+TGG | - | chr3.1:62943502-62943521 | None:intergenic | 35.0% | |
| TTTCTTCTTCCAAACCTTCA+CGG | - | chr3.1:62945187-62945206 | None:intergenic | 35.0% | |
| ! | ATGCCATTGTTATTGCCTAT+TGG | - | chr3.1:62945111-62945130 | None:intergenic | 35.0% |
| ! | CTCCGGATATTTCTAACATA+TGG | - | chr3.1:62944562-62944581 | None:intergenic | 35.0% |
| ! | CTCTTATTGGTTGCATTGAT+TGG | + | chr3.1:62945020-62945039 | MS.gene28855:intron | 35.0% |
| ! | TCGTATTTTCAATCAATCCC+TGG | + | chr3.1:62945557-62945576 | MS.gene28855:CDS | 35.0% |
| !! | ACATGCTCAAAAAGTATCAC+AGG | - | chr3.1:62945656-62945675 | None:intergenic | 35.0% |
| !! | AGTGAGATGTAATTTGTTCC+AGG | + | chr3.1:62944300-62944319 | MS.gene28855:intron | 35.0% |
| !! | CATGCTCAAAAAGTATCACA+GGG | - | chr3.1:62945655-62945674 | None:intergenic | 35.0% |
| !! | CTTTTTAGGGGTAAAGAATG+CGG | + | chr3.1:62944227-62944246 | MS.gene28855:intron | 35.0% |
| !! | TGGTATTTTAAACTGACCTC+CGG | - | chr3.1:62945471-62945490 | None:intergenic | 35.0% |
| !! | TTGCATTGATTGGTTGAAGT+TGG | + | chr3.1:62945030-62945049 | MS.gene28855:intron | 35.0% |
| !! | TTTTGTAACCGATTTCAGAG+AGG | + | chr3.1:62943620-62943639 | MS.gene28855:intron | 35.0% |
| !! | TTTTTAGGGGTAAAGAATGC+GGG | + | chr3.1:62944228-62944247 | MS.gene28855:intron | 35.0% |
| !! | TTTTTAGTGCATGCTTGGTT+TGG | + | chr3.1:62944134-62944153 | MS.gene28855:intron | 35.0% |
| !!! | AATCAGGTGGTTTTGAAATC+AGG | + | chr3.1:62943688-62943707 | MS.gene28855:CDS | 35.0% |
| !!! | GAATGTTTTTAGTGCATGCT+TGG | + | chr3.1:62944129-62944148 | MS.gene28855:intron | 35.0% |
| !!! | GCATAAGCTTTTGAAGTAGT+TGG | + | chr3.1:62944963-62944982 | MS.gene28855:intron | 35.0% |
| AAAAAGGAGAAGTTCATGCC+TGG | - | chr3.1:62945156-62945175 | None:intergenic | 40.0% | |
| AAAAGGAGAAGTTCATGCCT+GGG | - | chr3.1:62945155-62945174 | None:intergenic | 40.0% | |
| AAAGGTTGTCAATTCCAGTC+TGG | - | chr3.1:62944051-62944070 | None:intergenic | 40.0% | |
| AACATTGGAAGAATGGACAG+TGG | + | chr3.1:62946060-62946079 | MS.gene28855:CDS | 40.0% | |
| AAGGAATTGGATGGAGACAA+AGG | - | chr3.1:62943493-62943512 | None:intergenic | 40.0% | |
| AATATTGTGACATGCTCACC+AGG | - | chr3.1:62945755-62945774 | None:intergenic | 40.0% | |
| ACCCTGAAGTAATTGACATC+AGG | + | chr3.1:62945840-62945859 | MS.gene28855:CDS | 40.0% | |
| ACTGCAGTAACAATTTGAGC+AGG | - | chr3.1:62946091-62946110 | None:intergenic | 40.0% | |
| AGGAATTGGATGGAGACAAA+GGG | - | chr3.1:62943492-62943511 | None:intergenic | 40.0% | |
| ATCAATCCCTGGTATTCAGA+TGG | + | chr3.1:62945568-62945587 | MS.gene28855:CDS | 40.0% | |
| ATCTGATGCAAAGGTGAATC+AGG | + | chr3.1:62943672-62943691 | MS.gene28855:CDS | 40.0% | |
| ATGTTCATGCCCTCAATGAT+TGG | - | chr3.1:62945386-62945405 | None:intergenic | 40.0% | |
| CCAAGACATTAGTGAACAAG+GGG | + | chr3.1:62945813-62945832 | MS.gene28855:CDS | 40.0% | |
| CGCATTCTTTACCCCTAAAA+AGG | - | chr3.1:62944229-62944248 | None:intergenic | 40.0% | |
| GAACATGGGATTTCTACTTC+TGG | + | chr3.1:62945400-62945419 | MS.gene28855:CDS | 40.0% | |
| GAAGATGTAGGTCATTATGG+AGG | + | chr3.1:62945239-62945258 | MS.gene28855:CDS | 40.0% | |
| GACCTGATGTCAATTACTTC+AGG | - | chr3.1:62945845-62945864 | None:intergenic | 40.0% | |
| GCCAAGACATTAGTGAACAA+GGG | + | chr3.1:62945812-62945831 | MS.gene28855:CDS | 40.0% | |
| GGATCCTTGTGTTTGTGTTA+TGG | + | chr3.1:62945214-62945233 | MS.gene28855:CDS | 40.0% | |
| GGTAATTCATGACACGGTAT+TGG | + | chr3.1:62944778-62944797 | MS.gene28855:intron | 40.0% | |
| GTTTGATGAAAGCAGGAGAA+GGG | - | chr3.1:62944742-62944761 | None:intergenic | 40.0% | |
| TAAGCCTTGAAAAGAAGGGA+AGG | + | chr3.1:62944170-62944189 | MS.gene28855:intron | 40.0% | |
| TGAAGTCCCGATCGAATATA+AGG | - | chr3.1:62944104-62944123 | None:intergenic | 40.0% | |
| TGCCAAGACATTAGTGAACA+AGG | + | chr3.1:62945811-62945830 | MS.gene28855:CDS | 40.0% | |
| TGTCAGATCATCTGATGCAA+AGG | + | chr3.1:62943663-62943682 | MS.gene28855:CDS | 40.0% | |
| TGTCCATTCTTCCAATGTTC+CGG | - | chr3.1:62946059-62946078 | None:intergenic | 40.0% | |
| TGTTTGATGAAAGCAGGAGA+AGG | - | chr3.1:62944743-62944762 | None:intergenic | 40.0% | |
| TTGAAGAAGCTGAGATGGTT+AGG | + | chr3.1:62945729-62945748 | MS.gene28855:CDS | 40.0% | |
| ! | AATCATTGAGGGCATGAACA+TGG | + | chr3.1:62945385-62945404 | MS.gene28855:CDS | 40.0% |
| ! | ATCATTGAGGGCATGAACAT+GGG | + | chr3.1:62945386-62945405 | MS.gene28855:CDS | 40.0% |
| ! | CATCTGGAATTCTTTCCTTG+AGG | - | chr3.1:62945691-62945710 | None:intergenic | 40.0% |
| ! | TAACCGATTTCAGAGAGGAA+AGG | + | chr3.1:62943625-62943644 | MS.gene28855:intron | 40.0% |
| ! | TAGGCTATGCTTCACTGTTT+TGG | - | chr3.1:62944196-62944215 | None:intergenic | 40.0% |
| !! | CAGATGGATTTAGCTTGTGT+TGG | - | chr3.1:62944535-62944554 | None:intergenic | 40.0% |
| !! | CTACCTTTCCTCTCTGAAAT+CGG | - | chr3.1:62943631-62943650 | None:intergenic | 40.0% |
| !! | GAAGTTGGTAAAACCTGTGT+TGG | + | chr3.1:62945045-62945064 | MS.gene28855:intron | 40.0% |
| !! | TAGGAGCATCCAAATAGTCA+TGG | - | chr3.1:62945997-62946016 | None:intergenic | 40.0% |
| !! | TTTTAGGGGTAAAGAATGCG+GGG | + | chr3.1:62944229-62944248 | MS.gene28855:intron | 40.0% |
| AAGCCACCATCTGAATACCA+GGG | - | chr3.1:62945577-62945596 | None:intergenic | 45.0% | |
| AATCCCTGGTATTCAGATGG+TGG | + | chr3.1:62945571-62945590 | MS.gene28855:CDS | 45.0% | |
| AGCCCTTTGCTCATGAAACA+TGG | - | chr3.1:62944887-62944906 | None:intergenic | 45.0% | |
| AGCTCCCAATGCTTGGAAAA+GGG | - | chr3.1:62943461-62943480 | None:intergenic | 45.0% | |
| CCCCTTGTTCACTAATGTCT+TGG | - | chr3.1:62945816-62945835 | None:intergenic | 45.0% | |
| GCGTAAAATGTGCTTGTGCA+AGG | - | chr3.1:62944273-62944292 | None:intergenic | 45.0% | |
| GGAATGCTGCATTACACATC+CGG | + | chr3.1:62945449-62945468 | MS.gene28855:CDS | 45.0% | |
| GGAATTGGATGGAGACAAAG+GGG | - | chr3.1:62943491-62943510 | None:intergenic | 45.0% | |
| GGCGAAGATGTAGGTCATTA+TGG | + | chr3.1:62945236-62945255 | MS.gene28855:CDS | 45.0% | |
| GTCACTTGAAGAAGCTGAGA+TGG | + | chr3.1:62945724-62945743 | MS.gene28855:CDS | 45.0% | |
| TCAACACCTTACAACGCCAA+GGG | + | chr3.1:62945599-62945618 | MS.gene28855:CDS | 45.0% | |
| TCGCCCATAACACAAACACA+AGG | - | chr3.1:62945221-62945240 | None:intergenic | 45.0% | |
| TGATGCAAAGGTGAATCAGG+TGG | + | chr3.1:62943675-62943694 | MS.gene28855:CDS | 45.0% | |
| TGTGTTATGGGCGAAGATGT+AGG | + | chr3.1:62945227-62945246 | MS.gene28855:CDS | 45.0% | |
| TTCAACACCTTACAACGCCA+AGG | + | chr3.1:62945598-62945617 | MS.gene28855:CDS | 45.0% | |
| TTCTTCCAAACCTTCACGGA+GGG | - | chr3.1:62945183-62945202 | None:intergenic | 45.0% | |
| TTGTAGGATAGGACATACCC+AGG | - | chr3.1:62943876-62943895 | None:intergenic | 45.0% | |
| ! | CAGATGTGCATTTTGTTCCC+AGG | + | chr3.1:62945135-62945154 | MS.gene28855:intron | 45.0% |
| ! | GATGAGGTATCATGTCATGC+AGG | + | chr3.1:62945787-62945806 | MS.gene28855:CDS | 45.0% |
| ! | GGTCACCAAACTTTTCAGCT+AGG | - | chr3.1:62945286-62945305 | None:intergenic | 45.0% |
| ! | TAGGACATACCCAGGTTTTG+AGG | - | chr3.1:62943868-62943887 | None:intergenic | 45.0% |
| ! | TCATAGTGGAGGAGTGTATG+CGG | + | chr3.1:62945924-62945943 | MS.gene28855:CDS | 45.0% |
| !! | TGAAGGCGTTCTCAGCAATA+GGG | - | chr3.1:62945325-62945344 | None:intergenic | 45.0% |
| !! | TTGGCCTTCCCTTCTTTTCA+AGG | - | chr3.1:62944177-62944196 | None:intergenic | 45.0% |
| !!! | CAGGTGGTTTTGAAATCAGG+AGG | + | chr3.1:62943691-62943710 | MS.gene28855:CDS | 45.0% |
| AAAACAGGGAAGCAGTTCCC+TGG | + | chr3.1:62943833-62943852 | MS.gene28855:intron | 50.0% | |
| ACGCCGGAACATTGGAAGAA+TGG | + | chr3.1:62946053-62946072 | MS.gene28855:CDS | 50.0% | |
| AGCAGAACACTCACAGCGTT+TGG | + | chr3.1:62945532-62945551 | MS.gene28855:CDS | 50.0% | |
| ATCAAGCCCTTGGCGTTGTA+AGG | - | chr3.1:62945608-62945627 | None:intergenic | 50.0% | |
| ATCAGGAGGAGCAACTCGTA+AGG | + | chr3.1:62943705-62943724 | MS.gene28855:CDS | 50.0% | |
| ATGCTGCATTACACATCCGG+AGG | + | chr3.1:62945452-62945471 | MS.gene28855:CDS | 50.0% | |
| ATTGCTGAGAACGCCTTCAC+TGG | + | chr3.1:62945326-62945345 | MS.gene28855:CDS | 50.0% | |
| CAAGCCACCATCTGAATACC+AGG | - | chr3.1:62945578-62945597 | None:intergenic | 50.0% | |
| CAGCTCCCAATGCTTGGAAA+AGG | - | chr3.1:62943462-62943481 | None:intergenic | 50.0% | |
| CTTCACGGAGGGCTTCAAAA+AGG | - | chr3.1:62945172-62945191 | None:intergenic | 50.0% | |
| CTTCCAATGTTCCGGCGTAT+GGG | - | chr3.1:62946051-62946070 | None:intergenic | 50.0% | |
| CTTCTTCCAAACCTTCACGG+AGG | - | chr3.1:62945184-62945203 | None:intergenic | 50.0% | |
| GAGAACGCCTTCACTGGAAT+GGG | + | chr3.1:62945332-62945351 | MS.gene28855:CDS | 50.0% | |
| GGTCCACTTAGTCACACTCA+CGG | - | chr3.1:62944809-62944828 | None:intergenic | 50.0% | |
| GGTTCATGACTATTCAGCGC+TGG | + | chr3.1:62944984-62945003 | MS.gene28855:intron | 50.0% | |
| GTCCACTTAGTCACACTCAC+GGG | - | chr3.1:62944808-62944827 | None:intergenic | 50.0% | |
| TAACAGCAGCTCCCAATGCT+TGG | - | chr3.1:62943468-62943487 | None:intergenic | 50.0% | |
| TCAGGAGGAGCAACTCGTAA+GGG | + | chr3.1:62943706-62943725 | MS.gene28855:CDS | 50.0% | |
| TCCAATGCCCATTCCAGTGA+AGG | - | chr3.1:62945342-62945361 | None:intergenic | 50.0% | |
| TCTTCCAATGTTCCGGCGTA+TGG | - | chr3.1:62946052-62946071 | None:intergenic | 50.0% | |
| TGAGAACGCCTTCACTGGAA+TGG | + | chr3.1:62945331-62945350 | MS.gene28855:CDS | 50.0% | |
| TTCCAATGTTCCGGCGTATG+GGG | - | chr3.1:62946050-62946069 | None:intergenic | 50.0% | |
| ! | GCGACCCTTTTCCAAGCATT+GGG | + | chr3.1:62943454-62943473 | MS.gene28855:CDS | 50.0% |
| ! | GGTCTGAGGCCAATCATTGA+GGG | + | chr3.1:62945374-62945393 | MS.gene28855:CDS | 50.0% |
| ! | GTTTGGTGACCTCAGAGTCT+TGG | + | chr3.1:62945295-62945314 | MS.gene28855:CDS | 50.0% |
| ! | TGGTCTGAGGCCAATCATTG+AGG | + | chr3.1:62945373-62945392 | MS.gene28855:CDS | 50.0% |
| !! | GAAGGCGTTCTCAGCAATAG+GGG | - | chr3.1:62945324-62945343 | None:intergenic | 50.0% |
| !! | GTGAAGGCGTTCTCAGCAAT+AGG | - | chr3.1:62945326-62945345 | None:intergenic | 50.0% |
| !!! | CTTTTTGAAGCCCTCCGTGA+AGG | + | chr3.1:62945170-62945189 | MS.gene28855:CDS | 50.0% |
| AAGCAGTTCCCTGGCTTCTG+CGG | + | chr3.1:62943842-62943861 | MS.gene28855:CDS | 55.0% | |
| AAGTTGCCGACCAACTCCAC+CGG | - | chr3.1:62945510-62945529 | None:intergenic | 55.0% | |
| AATGTTCCGGCGTATGGGGT+CGG | - | chr3.1:62946046-62946065 | None:intergenic | 55.0% | |
| CAAAGGGCTCTTGCTTGTGG+TGG | + | chr3.1:62944898-62944917 | MS.gene28855:intron | 55.0% | |
| CACCCGTGAGTGTGACTAAG+TGG | + | chr3.1:62944803-62944822 | MS.gene28855:intron | 55.0% | |
| CGCAGCTTTCATCAAGCCCT+TGG | - | chr3.1:62945618-62945637 | None:intergenic | 55.0% | |
| CTTCTGCGGCCTCAAAACCT+GGG | + | chr3.1:62943856-62943875 | MS.gene28855:CDS | 55.0% | |
| GAAGCTGAGATGGTTAGGCC+TGG | + | chr3.1:62945734-62945753 | MS.gene28855:CDS | 55.0% | |
| GACGCATCGGGTTCTCATAG+TGG | + | chr3.1:62945910-62945929 | MS.gene28855:CDS | 55.0% | |
| GAGCAAAGGGCTCTTGCTTG+TGG | + | chr3.1:62944895-62944914 | MS.gene28855:intron | 55.0% | |
| GCATCGGGTTCTCATAGTGG+AGG | + | chr3.1:62945913-62945932 | MS.gene28855:CDS | 55.0% | |
| GCCTTCACTGGAATGGGCAT+TGG | + | chr3.1:62945338-62945357 | MS.gene28855:CDS | 55.0% | |
| TGAAGCCCTCCGTGAAGGTT+TGG | + | chr3.1:62945175-62945194 | MS.gene28855:CDS | 55.0% | |
| TGTATGCGGACGGGTGGAAT+TGG | + | chr3.1:62945938-62945957 | MS.gene28855:CDS | 55.0% | |
| ! | AGTGGAGGAGTGTATGCGGA+CGG | + | chr3.1:62945928-62945947 | MS.gene28855:CDS | 55.0% |
| ! | GGCGACCCTTTTCCAAGCAT+TGG | + | chr3.1:62943453-62943472 | MS.gene28855:CDS | 55.0% |
| !! | GATTGGCCTCAGACCAGTCA+TGG | - | chr3.1:62945369-62945388 | None:intergenic | 55.0% |
| !! | TAGGGGTGTCCAAGACTCTG+AGG | - | chr3.1:62945307-62945326 | None:intergenic | 55.0% |
| !!! | TTTTGAGGCCGCAGAAGCCA+GGG | - | chr3.1:62943853-62943872 | None:intergenic | 55.0% |
| AGTTGCCGACCAACTCCACC+GGG | - | chr3.1:62945509-62945528 | None:intergenic | 60.0% | |
| CCAGTTGTCATTCGTGGCCC+CGG | + | chr3.1:62945488-62945507 | MS.gene28855:CDS | 60.0% | |
| GACCCCATACGCCGGAACAT+TGG | + | chr3.1:62946045-62946064 | MS.gene28855:CDS | 60.0% | |
| GCTTCTGCGGCCTCAAAACC+TGG | + | chr3.1:62943855-62943874 | MS.gene28855:CDS | 60.0% | |
| GGAGGAGCAACTCGTAAGGG+TGG | + | chr3.1:62943709-62943728 | MS.gene28855:CDS | 60.0% | |
| ! | GGCATTGGAGCTGCCATGAC+TGG | + | chr3.1:62945353-62945372 | MS.gene28855:CDS | 60.0% |
| ! | GGTGGAGTTGGTCGGCAACT+TGG | + | chr3.1:62945509-62945528 | MS.gene28855:CDS | 60.0% |
| ! | GTGGAGGAGTGTATGCGGAC+GGG | + | chr3.1:62945929-62945948 | MS.gene28855:CDS | 60.0% |
| !! | GAGCTGCCATGACTGGTCTG+AGG | + | chr3.1:62945360-62945379 | MS.gene28855:CDS | 60.0% |
| !!! | GTTTTGAGGCCGCAGAAGCC+AGG | - | chr3.1:62943854-62943873 | None:intergenic | 60.0% |
| ATTCGTGGCCCCGGTGGAGT+TGG | + | chr3.1:62945497-62945516 | MS.gene28855:CDS | 65.0% | |
| CCGGGGCCACGAATGACAAC+TGG | - | chr3.1:62945491-62945510 | None:intergenic | 65.0% | |
| GTTGCCGACCAACTCCACCG+GGG | - | chr3.1:62945508-62945527 | None:intergenic | 65.0% | |
| GTTGTCATTCGTGGCCCCGG+TGG | + | chr3.1:62945491-62945510 | MS.gene28855:CDS | 65.0% | |
| TGGGGTCGGCACATCCTGAG+AGG | - | chr3.1:62946032-62946051 | None:intergenic | 65.0% | |
| ! | GAGGAGTGTATGCGGACGGG+TGG | + | chr3.1:62945932-62945951 | MS.gene28855:CDS | 65.0% |
| ! | GATGTGCCGACCCCATACGC+CGG | + | chr3.1:62946037-62946056 | MS.gene28855:CDS | 65.0% |
| ! | GTGGCCCCGGTGGAGTTGGT+CGG | + | chr3.1:62945501-62945520 | MS.gene28855:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 62943451 | 62946129 | 62943451 | ID=MS.gene28855 |
| chr3.1 | mRNA | 62943451 | 62946129 | 62943451 | ID=MS.gene28855.t1;Parent=MS.gene28855 |
| chr3.1 | exon | 62943451 | 62943523 | 62943451 | ID=MS.gene28855.t1.exon1;Parent=MS.gene28855.t1 |
| chr3.1 | CDS | 62943451 | 62943523 | 62943451 | ID=cds.MS.gene28855.t1;Parent=MS.gene28855.t1 |
| chr3.1 | exon | 62943638 | 62943759 | 62943638 | ID=MS.gene28855.t1.exon2;Parent=MS.gene28855.t1 |
| chr3.1 | CDS | 62943638 | 62943759 | 62943638 | ID=cds.MS.gene28855.t1;Parent=MS.gene28855.t1 |
| chr3.1 | exon | 62943840 | 62943877 | 62943840 | ID=MS.gene28855.t1.exon3;Parent=MS.gene28855.t1 |
| chr3.1 | CDS | 62943840 | 62943877 | 62943840 | ID=cds.MS.gene28855.t1;Parent=MS.gene28855.t1 |
| chr3.1 | exon | 62945157 | 62946129 | 62945157 | ID=MS.gene28855.t1.exon4;Parent=MS.gene28855.t1 |
| chr3.1 | CDS | 62945157 | 62946129 | 62945157 | ID=cds.MS.gene28855.t1;Parent=MS.gene28855.t1 |
| Gene Sequence |
| Protein sequence |
