AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29650.t1 MTR_5g082750 98.006 351 7 0 1 351 1 351 0.0 717
MS.gene29650.t1 MTR_3g070860 77.077 349 80 0 3 351 4 352 0.0 566
MS.gene29650.t1 MTR_4g015790 66.575 365 108 3 1 351 1 365 0.0 516
MS.gene29650.t1 MTR_7g068650 66.387 357 113 3 1 351 2 357 7.35e-179 503
MS.gene29650.t1 MTR_5g055680 37.202 336 204 3 14 349 13 341 3.46e-81 253
MS.gene29650.t1 MTR_5g055900 36.905 336 205 3 14 349 13 341 2.03e-79 249
MS.gene29650.t1 MTR_8g064200 36.842 323 198 3 14 336 18 334 3.28e-79 248
MS.gene29650.t1 MTR_8g064200 36.842 323 198 3 14 336 23 339 4.15e-79 248
MS.gene29650.t1 MTR_8g024120 41.896 327 180 6 20 344 13 331 5.45e-78 245
MS.gene29650.t1 MTR_2g072910 38.462 351 201 6 14 360 17 356 1.89e-77 244
MS.gene29650.t1 MTR_3g063180 39.542 349 193 9 12 351 8 347 2.58e-77 243
MS.gene29650.t1 MTR_3g092890 41.853 313 171 5 25 336 15 317 3.44e-77 243
MS.gene29650.t1 MTR_5g048570 36.310 336 205 4 14 349 13 339 3.51e-77 243
MS.gene29650.t1 MTR_0009s0050 36.905 336 205 3 14 349 13 341 4.24e-77 243
MS.gene29650.t1 MTR_7g062580 37.615 327 198 2 10 336 16 336 4.27e-77 243
MS.gene29650.t1 MTR_0009s0050 36.905 336 205 3 14 349 13 341 5.59e-77 243
MS.gene29650.t1 MTR_5g048740 38.226 327 188 5 14 336 11 327 1.06e-76 242
MS.gene29650.t1 MTR_5g048470 35.604 323 203 2 14 336 18 335 3.20e-76 241
MS.gene29650.t1 MTR_2g437380 37.037 324 199 4 14 336 17 336 3.22e-76 241
MS.gene29650.t1 MTR_0328s0030 38.390 323 192 3 14 336 11 326 5.11e-76 240
MS.gene29650.t1 MTR_2g072890 37.644 348 209 5 14 360 17 357 8.02e-75 237
MS.gene29650.t1 MTR_7g062570 35.465 344 216 2 10 353 16 353 1.63e-74 236
MS.gene29650.t1 MTR_7g062550 35.593 354 218 4 10 362 21 365 2.95e-74 236
MS.gene29650.t1 MTR_5g048550 35.714 336 209 3 14 349 13 341 1.33e-73 234
MS.gene29650.t1 MTR_1g033810 37.460 315 193 2 22 336 20 330 1.51e-73 234
MS.gene29650.t1 MTR_5g048850 35.897 351 216 4 14 364 13 354 2.67e-73 233
MS.gene29650.t1 MTR_5g055820 36.471 340 206 4 14 351 13 344 3.34e-73 233
MS.gene29650.t1 MTR_7g062600 35.014 357 223 4 10 365 12 360 1.48e-72 231
MS.gene29650.t1 MTR_5g011250 37.764 331 197 5 14 336 8 337 4.81e-72 230
MS.gene29650.t1 MTR_7g063730 35.652 345 213 4 10 351 22 360 4.84e-72 230
MS.gene29650.t1 MTR_3g072810 38.344 326 190 5 14 337 6 322 6.03e-72 229
MS.gene29650.t1 MTR_5g055800 36.533 323 197 4 14 336 13 327 2.11e-71 228
MS.gene29650.t1 MTR_5g055690 36.103 349 214 5 11 357 9 350 2.00e-70 226
MS.gene29650.t1 MTR_0009s0480 34.375 352 220 5 14 364 12 353 4.90e-69 222
MS.gene29650.t1 MTR_5g085330 39.590 293 163 5 48 336 4 286 4.54e-67 216
MS.gene29650.t1 MTR_3g072820 35.692 325 200 4 14 336 7 324 9.05e-67 216
MS.gene29650.t1 MTR_3g083370 37.458 299 174 6 47 343 2 289 2.53e-66 214
MS.gene29650.t1 MTR_6g015950 39.450 327 180 6 24 345 15 328 6.95e-66 213
MS.gene29650.t1 MTR_2g025120 37.124 299 175 6 48 343 3 291 1.67e-64 209
MS.gene29650.t1 MTR_3g088565 38.095 294 166 4 49 336 3 286 2.01e-64 209
MS.gene29650.t1 MTR_5g059130 34.441 331 205 5 11 336 3 326 1.83e-63 207
MS.gene29650.t1 MTR_8g075890 36.556 331 200 8 11 337 1 325 5.09e-63 207
MS.gene29650.t1 MTR_3g026150 36.418 335 196 8 14 341 24 348 6.59e-63 206
MS.gene29650.t1 MTR_5g065010 34.848 330 203 7 11 336 1 322 6.50e-62 203
MS.gene29650.t1 MTR_8g075830 36.858 331 199 8 11 337 1 325 6.92e-62 204
MS.gene29650.t1 MTR_5g022020 36.697 327 196 8 14 337 7 325 1.07e-61 203
MS.gene29650.t1 MTR_4g087090 37.971 345 191 11 29 360 12 346 8.19e-61 201
MS.gene29650.t1 MTR_3g117420 36.879 282 173 3 48 328 51 328 1.00e-60 201
MS.gene29650.t1 MTR_8g074050 36.364 286 177 3 44 328 47 328 1.27e-60 200
MS.gene29650.t1 MTR_7g045650 36.111 288 177 3 3 289 13 294 1.00e-59 197
MS.gene29650.t1 MTR_7g081710 36.280 328 198 7 16 340 16 335 1.16e-58 195
MS.gene29650.t1 MTR_5g059140 34.069 317 197 5 14 325 6 315 1.25e-58 194
MS.gene29650.t1 MTR_1g062110 34.473 351 204 9 14 349 27 366 1.76e-58 196
MS.gene29650.t1 MTR_7g016090 35.976 328 189 8 24 345 15 327 2.03e-58 194
MS.gene29650.t1 MTR_7g016090 35.976 328 189 8 24 345 17 329 2.12e-58 194
MS.gene29650.t1 MTR_3g058610 36.190 315 193 6 23 335 14 322 6.39e-58 193
MS.gene29650.t1 MTR_2g072910 39.483 271 151 5 14 280 17 278 1.00e-57 190
MS.gene29650.t1 MTR_2g069300 34.503 342 213 5 14 351 19 353 1.14e-57 193
MS.gene29650.t1 MTR_1g070135 34.375 320 199 7 20 337 10 320 1.51e-57 192
MS.gene29650.t1 MTR_4g116010 36.071 280 172 2 49 328 50 322 2.07e-57 192
MS.gene29650.t1 MTR_1g034120 34.174 357 205 10 24 360 3 349 2.14e-57 192
MS.gene29650.t1 MTR_1g070120 35.110 319 196 7 20 336 10 319 2.33e-57 191
MS.gene29650.t1 MTR_1g034060 34.174 357 205 10 24 360 3 349 1.24e-56 190
MS.gene29650.t1 MTR_1g070080 35.802 324 195 8 20 341 9 321 1.93e-56 189
MS.gene29650.t1 MTR_8g074070 35.315 286 180 3 44 328 47 328 7.03e-56 188
MS.gene29650.t1 MTR_7g105070 36.313 358 202 9 5 351 15 357 9.00e-56 188
MS.gene29650.t1 MTR_8g009080 35.777 341 205 7 14 349 59 390 9.89e-56 189
MS.gene29650.t1 MTR_5g048850 36.842 266 161 3 14 279 13 271 1.11e-55 185
MS.gene29650.t1 MTR_0009s0050 35.659 258 162 2 108 365 4 257 1.14e-55 184
MS.gene29650.t1 MTR_0009s0050 35.798 257 161 2 108 364 4 256 1.44e-55 184
MS.gene29650.t1 MTR_8g009160 33.333 342 214 6 14 351 28 359 1.51e-55 187
MS.gene29650.t1 MTR_3g091350 33.735 332 210 6 11 339 20 344 3.02e-55 187
MS.gene29650.t1 MTR_4g087110 35.143 350 199 11 29 360 8 347 4.66e-55 186
MS.gene29650.t1 MTR_2g437380 38.525 244 147 3 94 336 1 242 5.52e-55 183
MS.gene29650.t1 MTR_5g055690 36.803 269 161 5 11 277 9 270 1.25e-54 182
MS.gene29650.t1 MTR_0056s0160 38.095 231 141 1 123 353 2 230 2.13e-54 180
MS.gene29650.t1 MTR_1g034140 35.276 326 170 10 25 328 4 310 2.40e-54 184
MS.gene29650.t1 MTR_8g028435 35.048 311 191 5 45 351 56 359 3.97e-54 184
MS.gene29650.t1 MTR_4g087120 36.025 322 176 12 29 329 8 320 4.89e-54 183
MS.gene29650.t1 MTR_8g009110 32.479 351 224 6 5 351 19 360 4.93e-54 183
MS.gene29650.t1 MTR_7g102820 32.153 339 207 8 22 343 35 367 5.05e-54 184
MS.gene29650.t1 MTR_7g056347 33.526 346 212 8 14 351 33 368 7.28e-54 183
MS.gene29650.t1 MTR_2g069090 33.237 346 219 6 14 355 33 370 1.11e-53 182
MS.gene29650.t1 MTR_4g117880 34.097 349 211 10 14 355 28 364 1.45e-53 182
MS.gene29650.t1 MTR_2g069190 34.393 346 214 7 14 355 33 369 1.95e-53 182
MS.gene29650.t1 MTR_1g102070 35.331 317 192 6 24 333 37 347 2.71e-53 182
MS.gene29650.t1 MTR_4g087100 34.000 350 203 12 29 360 8 347 2.95e-53 181
MS.gene29650.t1 MTR_1g070085 34.472 322 199 8 18 336 7 319 4.02e-53 181
MS.gene29650.t1 MTR_1g070085 34.472 322 199 8 18 336 7 319 4.02e-53 181
MS.gene29650.t1 MTR_5g032870 35.692 325 202 7 15 336 5 325 5.47e-53 180
MS.gene29650.t1 MTR_8g008930 32.754 345 213 8 14 351 28 360 6.63e-53 181
MS.gene29650.t1 MTR_3g117485 33.010 309 197 5 44 348 44 346 7.96e-53 180
MS.gene29650.t1 MTR_2g069210 33.626 342 215 7 14 351 29 362 8.88e-53 180
MS.gene29650.t1 MTR_4g093840 33.989 356 220 7 10 358 19 366 1.41e-52 180
MS.gene29650.t1 MTR_6g464620 34.472 322 188 7 24 333 42 352 2.15e-52 179
MS.gene29650.t1 MTR_8g062600 33.333 348 210 8 14 351 33 368 4.85e-52 178
MS.gene29650.t1 MTR_2g068960 33.611 360 213 10 5 351 18 364 5.11e-52 178
MS.gene29650.t1 MTR_7g062560 33.537 328 201 6 10 336 22 333 5.81e-52 178
MS.gene29650.t1 MTR_0032s0040 34.262 359 197 11 14 351 28 368 6.55e-52 178
MS.gene29650.t1 MTR_5g032880 36.308 325 192 7 15 336 5 317 1.01e-51 184
MS.gene29650.t1 MTR_5g032880 36.086 327 198 6 15 336 343 663 3.51e-51 182
MS.gene29650.t1 MTR_8g009170 32.558 344 216 8 14 351 28 361 1.78e-51 177
MS.gene29650.t1 MTR_6g092620 36.918 279 159 7 49 322 3 269 1.87e-51 175
MS.gene29650.t1 MTR_8g009090 31.977 344 216 8 14 351 28 359 3.91e-51 176
MS.gene29650.t1 MTR_0009s0480 33.333 264 169 3 14 277 12 268 7.65e-51 172
MS.gene29650.t1 MTR_4g087140 32.923 325 194 9 22 328 1 319 1.18e-50 174
MS.gene29650.t1 MTR_8g074070 34.965 286 162 5 44 328 47 309 1.27e-50 174
MS.gene29650.t1 MTR_1g032140 35.207 338 200 9 5 336 21 345 2.18e-50 174
MS.gene29650.t1 MTR_2g068950 31.956 363 215 11 5 351 18 364 4.46e-50 173
MS.gene29650.t1 MTR_2g069010 31.667 360 220 11 5 351 24 370 5.51e-50 173
MS.gene29650.t1 MTR_1g070185 31.778 343 219 6 5 344 25 355 1.23e-49 172
MS.gene29650.t1 MTR_1g032220 35.795 352 201 10 14 357 37 371 1.40e-49 172
MS.gene29650.t1 MTR_8g063070 31.549 355 223 8 2 347 21 364 2.32e-49 171
MS.gene29650.t1 MTR_1g081840 34.539 304 179 6 50 341 54 349 3.45e-49 171
MS.gene29650.t1 MTR_3g043900 32.948 346 209 10 14 351 18 348 3.70e-49 170
MS.gene29650.t1 MTR_3g091360 34.343 297 186 4 44 338 47 336 9.06e-49 169
MS.gene29650.t1 MTR_4g024660 31.700 347 217 8 14 351 33 368 9.09e-49 170
MS.gene29650.t1 MTR_3g117485 34.686 271 167 5 82 348 10 274 1.11e-48 167
MS.gene29650.t1 MTR_3g026150 36.066 244 148 3 102 341 6 245 3.07e-48 165
MS.gene29650.t1 MTR_2g068840 32.113 355 216 9 14 358 22 361 4.28e-48 168
MS.gene29650.t1 MTR_4g087130 34.857 350 205 12 29 363 8 349 1.02e-47 167
MS.gene29650.t1 MTR_3g083370 35.294 238 143 4 47 283 2 229 2.01e-47 162
MS.gene29650.t1 MTR_2g083030 32.781 302 179 9 41 337 29 311 4.50e-47 164
MS.gene29650.t1 MTR_7g029655 32.329 365 211 11 5 351 19 365 5.22e-47 165
MS.gene29650.t1 MTR_7g016080 31.804 327 198 7 24 345 15 321 6.43e-47 164
MS.gene29650.t1 MTR_8g033380 30.909 330 192 6 22 333 30 341 6.58e-47 165
MS.gene29650.t1 MTR_3g026150 35.688 269 158 7 14 277 24 282 1.00e-46 162
MS.gene29650.t1 MTR_2g102570 32.012 328 195 7 20 336 23 333 1.77e-46 164
MS.gene29650.t1 MTR_1g032250 33.429 350 212 10 14 357 37 371 5.26e-46 162
MS.gene29650.t1 MTR_3g045230 31.395 344 218 8 14 351 18 349 6.24e-46 162
MS.gene29650.t1 MTR_1g093140 30.347 346 221 9 18 351 36 373 6.35e-46 162
MS.gene29650.t1 MTR_1g093110 32.059 340 213 9 7 336 23 354 8.72e-46 162
MS.gene29650.t1 MTR_2g069060 32.177 317 199 7 36 344 30 338 1.68e-45 160
MS.gene29650.t1 MTR_1g062110 35.484 279 154 9 14 277 27 294 2.09e-45 159
MS.gene29650.t1 MTR_7g102720 33.956 321 177 10 44 351 32 330 2.61e-45 160
MS.gene29650.t1 MTR_8g093930 29.360 344 218 8 11 343 14 343 3.36e-45 160
MS.gene29650.t1 MTR_4g074130 33.871 310 184 11 31 337 24 315 8.07e-45 159
MS.gene29650.t1 MTR_1g043760 33.731 335 206 9 7 336 13 336 1.00e-44 159
MS.gene29650.t1 MTR_4g119410 31.503 346 219 8 14 351 33 368 1.13e-44 159
MS.gene29650.t1 MTR_2g025120 35.931 231 137 4 48 277 3 223 1.27e-44 154
MS.gene29650.t1 MTR_3g088745 33.333 339 203 8 15 341 5 332 1.99e-44 158
MS.gene29650.t1 MTR_2g083000 33.333 291 175 7 49 337 33 306 3.99e-44 156
MS.gene29650.t1 MTR_1g093120 31.014 345 223 8 14 351 29 365 4.69e-44 157
MS.gene29650.t1 MTR_7g451860 33.333 297 178 7 49 341 41 321 7.28e-44 156
MS.gene29650.t1 MTR_7g047670 33.333 297 178 7 49 341 41 321 7.28e-44 156
MS.gene29650.t1 MTR_1g070135 35.769 260 156 7 20 277 10 260 4.36e-43 152
MS.gene29650.t1 MTR_1g043775 32.000 350 223 8 5 349 11 350 4.40e-43 154
MS.gene29650.t1 MTR_8g041620 31.889 323 203 8 14 328 33 346 6.64e-43 154
MS.gene29650.t1 MTR_8g041600 30.530 321 210 6 14 328 33 346 7.76e-43 154
MS.gene29650.t1 MTR_2g069020 30.641 359 228 10 5 354 22 368 8.02e-43 154
MS.gene29650.t1 MTR_2g069020 30.641 359 228 10 5 354 22 368 1.16e-42 154
MS.gene29650.t1 MTR_8g006930 33.046 348 215 9 12 351 31 368 1.51e-42 153
MS.gene29650.t1 MTR_1g043810 31.054 351 227 8 7 352 13 353 2.28e-42 152
MS.gene29650.t1 MTR_0009s0050 42.236 161 91 1 205 365 17 175 2.80e-42 147
MS.gene29650.t1 MTR_3g096500 31.230 317 205 5 24 333 44 354 2.84e-42 153
MS.gene29650.t1 MTR_8g009150 30.868 311 185 5 45 351 56 340 2.02e-41 149
MS.gene29650.t1 MTR_7g078010 33.041 342 209 10 12 344 31 361 3.64e-41 149
MS.gene29650.t1 MTR_3g464530 33.333 309 164 9 40 337 25 302 4.86e-41 148
MS.gene29650.t1 MTR_1g043770 31.322 348 222 8 7 349 13 348 7.20e-41 148
MS.gene29650.t1 MTR_2g019370 31.677 322 187 13 36 337 6 314 2.43e-40 146
MS.gene29650.t1 MTR_8g009080 34.470 264 164 5 14 276 59 314 3.76e-40 146
MS.gene29650.t1 MTR_7g056393 31.988 347 216 10 14 351 33 368 5.75e-40 146
MS.gene29650.t1 MTR_8g009120 32.797 311 187 7 45 351 56 348 5.76e-40 146
MS.gene29650.t1 MTR_1g048940 30.581 327 211 9 19 340 18 333 6.61e-40 146
MS.gene29650.t1 MTR_4g115990 30.961 281 168 4 49 328 46 301 8.59e-40 145
MS.gene29650.t1 MTR_8g469400 30.836 347 207 9 14 351 33 355 1.53e-39 145
MS.gene29650.t1 MTR_8g009080 34.483 261 162 5 14 273 59 311 1.95e-39 144
MS.gene29650.t1 MTR_3g040410 31.646 316 202 9 49 359 6 312 4.21e-39 142
MS.gene29650.t1 MTR_5g005570 31.529 314 188 10 35 341 21 314 6.07e-39 142
MS.gene29650.t1 MTR_8g461330 30.650 323 189 10 33 337 9 314 4.22e-38 140
MS.gene29650.t1 MTR_8g009170 31.183 279 178 7 14 288 28 296 8.49e-38 139
MS.gene29650.t1 MTR_1g070085 34.286 245 150 7 98 336 2 241 4.79e-36 133
MS.gene29650.t1 MTR_8g093980 30.405 296 189 8 49 335 59 346 5.47e-36 135
MS.gene29650.t1 MTR_2g068800 30.662 287 159 9 14 291 22 277 7.08e-36 133
MS.gene29650.t1 MTR_1g070100 34.034 238 149 6 101 335 4 236 1.34e-35 132
MS.gene29650.t1 MTR_4g132770 47.244 127 65 1 212 336 28 154 6.58e-35 127
MS.gene29650.t1 MTR_4g100600 33.443 305 180 10 45 336 5 299 6.69e-35 131
MS.gene29650.t1 MTR_2g069060 33.891 239 149 5 48 285 26 256 7.47e-35 130
MS.gene29650.t1 MTR_0009s0400 43.548 124 70 0 213 336 1 124 3.66e-34 124
MS.gene29650.t1 MTR_8g041600 30.075 266 177 5 14 277 33 291 4.12e-33 126
MS.gene29650.t1 MTR_7g056353 30.488 328 186 6 14 335 35 326 1.67e-32 128
MS.gene29650.t1 MTR_2g070870 28.296 311 189 12 40 337 17 306 3.97e-32 124
MS.gene29650.t1 MTR_4g100590 32.459 305 178 11 45 336 5 294 4.15e-32 124
MS.gene29650.t1 MTR_8g102600 31.010 287 170 10 72 336 29 309 5.85e-32 124
MS.gene29650.t1 MTR_6g088665 30.844 308 185 11 51 336 20 321 7.20e-32 124
MS.gene29650.t1 MTR_2g033270 30.464 302 178 10 48 337 18 299 8.45e-32 123
MS.gene29650.t1 MTR_6g088665 30.945 307 185 11 51 336 20 320 1.41e-31 123
MS.gene29650.t1 MTR_4g123020 27.974 311 204 8 34 337 5 302 3.26e-31 122
MS.gene29650.t1 MTR_1g043770 30.769 286 186 6 7 291 13 287 5.78e-31 120
MS.gene29650.t1 MTR_1g043775 31.868 273 176 6 5 276 11 274 9.92e-31 120
MS.gene29650.t1 MTR_1g011580 29.293 297 188 9 44 336 58 336 1.24e-30 120
MS.gene29650.t1 MTR_3g464530 33.333 249 134 8 40 277 25 252 5.81e-30 116
MS.gene29650.t1 MTR_1g043810 30.627 271 178 6 7 276 13 274 1.75e-29 117
MS.gene29650.t1 MTR_7g078010 33.209 268 167 8 12 277 31 288 1.90e-29 116
MS.gene29650.t1 MTR_1g027290 27.184 309 195 8 43 335 23 317 4.24e-29 116
MS.gene29650.t1 MTR_4g096840 28.777 278 180 12 72 337 43 314 1.35e-28 114
MS.gene29650.t1 MTR_1g070110 31.855 248 130 6 94 336 1 214 1.05e-27 110
MS.gene29650.t1 MTR_1g027310 26.102 295 174 5 43 335 43 295 2.38e-27 111
MS.gene29650.t1 MTR_1g086550 28.923 325 193 13 37 337 4 314 1.59e-26 109
MS.gene29650.t1 MTR_8g009180 36.872 179 107 3 176 351 114 289 4.92e-26 107
MS.gene29650.t1 MTR_5g025090 26.117 291 198 5 48 337 4 278 1.30e-25 105
MS.gene29650.t1 MTR_5g025050 27.835 291 191 7 49 337 5 278 2.58e-25 105
MS.gene29650.t1 MTR_5g027230 28.477 302 183 9 45 337 2 279 5.37e-25 104
MS.gene29650.t1 MTR_8g030880 28.339 307 194 10 46 339 2 295 1.03e-24 103
MS.gene29650.t1 MTR_5g024940 29.252 294 172 7 45 337 2 260 2.96e-24 101
MS.gene29650.t1 MTR_5g025060 25.424 295 176 7 45 337 2 254 5.79e-24 100
MS.gene29650.t1 MTR_2g072930 37.908 153 84 4 14 162 17 162 3.50e-23 95.9
MS.gene29650.t1 MTR_8g102600 30.189 265 157 10 94 336 1 259 6.04e-23 97.8
MS.gene29650.t1 MTR_4g011690 29.141 326 194 12 44 347 4 314 4.89e-22 96.3
MS.gene29650.t1 MTR_1g032240 48.515 101 41 3 208 307 56 146 1.75e-21 91.3
MS.gene29650.t1 MTR_7g077670 28.462 260 162 9 74 324 30 274 3.71e-21 94.0
MS.gene29650.t1 MTR_1g043840 35.838 173 101 3 171 336 54 223 8.71e-21 93.2
MS.gene29650.t1 MTR_4g011720 27.036 307 206 9 44 343 4 299 1.75e-20 91.7
MS.gene29650.t1 MTR_0009s0410 30.065 153 102 2 14 166 12 159 2.85e-20 87.8
MS.gene29650.t1 MTR_4g100590 30.469 256 156 9 94 336 1 247 1.12e-19 88.6
MS.gene29650.t1 MTR_4g100600 33.180 217 128 8 45 253 5 212 8.85e-19 85.1
MS.gene29650.t1 MTR_3g108520 25.667 300 202 8 49 336 7 297 1.14e-18 86.7
MS.gene29650.t1 MTR_4g021360 23.453 307 198 10 49 336 7 295 4.94e-16 79.0
MS.gene29650.t1 MTR_4g021380 23.718 312 206 10 43 336 1 298 6.51e-16 78.6
MS.gene29650.t1 MTR_4g094900 26.667 225 139 6 47 251 6 224 8.90e-16 77.0
MS.gene29650.t1 MTR_4g132765 32.911 158 92 4 49 204 4 149 2.72e-15 78.6
MS.gene29650.t1 MTR_7g090520 27.586 319 209 14 49 355 10 318 2.26e-14 73.9
MS.gene29650.t1 MTR_7g056370 28.962 183 123 4 14 195 12 188 9.06e-14 70.5
MS.gene29650.t1 MTR_8g014330 22.901 262 187 5 63 309 70 331 3.57e-13 70.9
MS.gene29650.t1 MTR_2g068850 30.357 168 99 6 14 170 22 182 3.98e-13 68.6
MS.gene29650.t1 MTR_4g011720 26.971 241 158 9 44 277 4 233 2.60e-12 67.0
MS.gene29650.t1 MTR_1g011600 24.820 278 178 11 70 331 34 296 1.10e-11 65.5
MS.gene29650.t1 MTR_6g035160 32.743 113 73 3 226 336 48 159 1.67e-11 63.2
MS.gene29650.t1 MTR_3g040440 43.662 71 39 1 226 296 15 84 8.14e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29650.t1 AT5G05600 68.195 349 111 0 3 351 16 364 7.74e-180 505
MS.gene29650.t1 AT3G11180 68.376 351 103 2 5 351 47 393 1.43e-178 503
MS.gene29650.t1 AT3G11180 68.314 344 101 2 5 344 47 386 1.32e-174 493
MS.gene29650.t1 AT3G55970 66.761 352 112 3 5 351 5 356 5.29e-172 485
MS.gene29650.t1 AT2G38240 58.213 347 138 3 7 351 5 346 6.88e-153 436
MS.gene29650.t1 AT5G05600 67.273 275 90 0 3 277 16 290 8.78e-138 395
MS.gene29650.t1 AT3G55970 68.345 278 83 3 5 277 5 282 5.16e-135 389
MS.gene29650.t1 AT4G10500 42.222 315 171 7 25 336 20 326 1.26e-77 244
MS.gene29650.t1 AT1G17020 36.232 345 216 3 7 349 9 351 5.38e-77 243
MS.gene29650.t1 AT4G10490 41.667 324 171 9 20 336 13 325 2.96e-76 241
MS.gene29650.t1 AT4G25300 36.646 322 201 2 15 336 18 336 1.08e-75 239
MS.gene29650.t1 AT1G78550 34.431 334 213 3 5 336 7 336 6.48e-75 238
MS.gene29650.t1 AT1G17010 36.119 335 204 6 7 336 9 338 2.93e-72 231
MS.gene29650.t1 AT5G24530 37.107 318 184 7 24 336 14 320 1.84e-70 225
MS.gene29650.t1 AT4G22880 36.686 338 201 6 14 339 7 343 2.84e-70 225
MS.gene29650.t1 AT4G22880 36.686 338 201 6 14 339 7 343 2.84e-70 225
MS.gene29650.t1 AT4G22880 36.686 338 201 6 14 339 7 343 2.84e-70 225
MS.gene29650.t1 AT3G21420 37.500 328 198 5 14 336 17 342 6.30e-70 225
MS.gene29650.t1 AT5G08640 36.697 327 196 5 14 336 6 325 3.33e-67 217
MS.gene29650.t1 AT5G08640 36.697 327 196 5 14 336 6 325 3.33e-67 217
MS.gene29650.t1 AT4G25310 37.273 330 195 8 11 336 12 333 1.07e-66 216
MS.gene29650.t1 AT4G16330 39.216 306 166 7 48 348 66 356 6.65e-66 214
MS.gene29650.t1 AT3G13610 34.884 344 204 9 14 351 27 356 6.18e-63 207
MS.gene29650.t1 AT3G51240 38.065 310 184 6 28 335 18 321 6.40e-63 206
MS.gene29650.t1 AT1G12010 36.610 295 174 5 43 336 1 283 1.12e-61 202
MS.gene29650.t1 AT1G62380 36.949 295 173 5 43 336 1 283 3.50e-61 201
MS.gene29650.t1 AT1G78550 35.938 256 162 1 81 336 5 258 5.55e-61 199
MS.gene29650.t1 AT3G60290 36.391 327 198 7 17 340 19 338 1.28e-59 198
MS.gene29650.t1 AT5G54000 35.404 322 199 6 23 339 17 334 1.32e-59 197
MS.gene29650.t1 AT5G20400 35.161 310 193 5 23 328 17 322 1.96e-59 197
MS.gene29650.t1 AT1G49390 36.491 285 179 2 48 332 44 326 2.02e-59 197
MS.gene29650.t1 AT2G44800 35.866 329 199 8 16 340 18 338 4.67e-59 196
MS.gene29650.t1 AT1G05010 37.966 295 167 7 48 336 3 287 6.86e-59 195
MS.gene29650.t1 AT1G77330 37.075 294 168 4 49 336 3 285 2.03e-57 191
MS.gene29650.t1 AT5G20550 33.866 313 194 5 23 328 17 323 6.96e-57 191
MS.gene29650.t1 AT2G36690 34.884 344 208 9 14 349 21 356 1.02e-56 191
MS.gene29650.t1 AT2G36690 34.884 344 208 9 14 349 21 356 1.02e-56 191
MS.gene29650.t1 AT1G55290 33.333 345 209 9 14 351 26 356 1.06e-56 190
MS.gene29650.t1 AT4G16330 40.964 249 136 5 104 348 9 250 3.35e-55 183
MS.gene29650.t1 AT3G19010 33.746 323 192 8 29 336 8 323 1.19e-54 184
MS.gene29650.t1 AT3G19010 33.746 323 192 8 29 336 8 323 1.19e-54 184
MS.gene29650.t1 AT1G06650 35.143 350 206 8 14 352 26 365 3.03e-54 184
MS.gene29650.t1 AT4G25420 34.769 325 198 7 24 341 39 356 3.36e-54 184
MS.gene29650.t1 AT1G06620 34.393 346 209 7 14 352 27 361 1.02e-53 182
MS.gene29650.t1 AT5G54000 37.500 256 157 2 85 339 1 254 2.16e-53 179
MS.gene29650.t1 AT3G19000 36.364 330 186 8 46 360 29 349 3.04e-53 181
MS.gene29650.t1 AT3G12900 35.061 328 195 8 14 336 22 336 3.80e-53 181
MS.gene29650.t1 AT2G19590 36.749 283 165 6 42 322 4 274 9.13e-53 179
MS.gene29650.t1 AT1G49390 36.694 248 156 1 85 332 1 247 2.55e-52 176
MS.gene29650.t1 AT1G06640 35.714 350 204 8 14 352 26 365 1.32e-51 177
MS.gene29650.t1 AT5G63600 30.744 309 197 5 34 336 12 309 8.71e-51 174
MS.gene29650.t1 AT5G63600 30.968 310 196 6 34 336 12 310 6.58e-50 171
MS.gene29650.t1 AT4G25310 33.030 330 181 8 11 336 12 305 1.34e-49 171
MS.gene29650.t1 AT5G43440 34.835 333 200 9 14 338 24 347 1.74e-49 171
MS.gene29650.t1 AT5G63590 35.034 294 176 5 48 333 13 299 2.90e-49 169
MS.gene29650.t1 AT3G51240 41.102 236 133 4 102 335 6 237 3.13e-49 168
MS.gene29650.t1 AT2G30840 34.366 355 219 10 7 355 14 360 3.59e-49 171
MS.gene29650.t1 AT5G51810 31.915 329 196 8 25 341 42 354 5.72e-48 168
MS.gene29650.t1 AT5G07200 32.416 327 205 6 25 341 37 357 1.35e-47 167
MS.gene29650.t1 AT1G03410 35.015 337 201 10 14 341 20 347 2.14e-47 166
MS.gene29650.t1 AT1G60980 32.523 329 199 8 23 339 34 351 2.91e-47 166
MS.gene29650.t1 AT1G03410 35.241 332 197 10 14 336 57 379 3.64e-47 166
MS.gene29650.t1 AT1G15550 34.343 297 178 6 45 336 53 337 6.39e-47 164
MS.gene29650.t1 AT1G06645 33.429 350 209 8 14 352 39 375 8.46e-46 162
MS.gene29650.t1 AT2G30840 34.085 355 214 11 7 355 14 354 8.98e-46 161
MS.gene29650.t1 AT2G19590 37.903 248 143 5 77 322 21 259 1.35e-45 159
MS.gene29650.t1 AT5G43450 34.036 332 197 9 14 336 24 342 1.78e-45 161
MS.gene29650.t1 AT3G19010 31.579 323 169 8 29 336 8 293 3.54e-45 159
MS.gene29650.t1 AT1G04350 31.977 344 214 10 14 349 22 353 5.47e-45 159
MS.gene29650.t1 AT5G59530 33.053 357 206 12 14 355 24 362 1.19e-44 159
MS.gene29650.t1 AT2G30830 32.853 347 216 8 12 352 19 354 1.38e-44 158
MS.gene29650.t1 AT1G80340 34.062 320 190 9 32 336 17 330 2.13e-44 157
MS.gene29650.t1 AT5G59540 31.746 315 189 9 49 351 61 361 2.56e-44 158
MS.gene29650.t1 AT1G44090 34.333 300 189 5 48 341 62 359 2.65e-44 158
MS.gene29650.t1 AT5G07480 32.239 335 207 7 15 340 14 337 3.44e-44 157
MS.gene29650.t1 AT1G80330 34.098 305 166 11 48 336 48 333 1.57e-42 153
MS.gene29650.t1 AT3G19000 37.247 247 134 7 46 277 29 269 4.91e-42 149
MS.gene29650.t1 AT3G61400 32.845 341 211 10 7 336 18 351 8.67e-42 151
MS.gene29650.t1 AT5G12270 31.858 339 208 9 22 351 30 354 8.49e-41 148
MS.gene29650.t1 AT1G06650 34.799 273 167 5 14 282 26 291 1.32e-40 147
MS.gene29650.t1 AT1G04380 32.686 309 189 8 49 351 45 340 1.42e-40 147
MS.gene29650.t1 AT4G25300 38.596 171 104 1 166 336 73 242 2.21e-40 144
MS.gene29650.t1 AT4G21200 31.715 309 176 10 38 337 32 314 3.79e-40 146
MS.gene29650.t1 AT5G63595 31.618 272 159 5 40 311 16 260 5.13e-40 144
MS.gene29650.t1 AT1G03400 31.579 342 200 10 7 336 13 332 7.18e-40 145
MS.gene29650.t1 AT5G63580 35.897 234 139 4 46 277 16 240 1.35e-39 142
MS.gene29650.t1 AT2G25450 31.054 351 216 11 12 351 19 354 1.41e-39 145
MS.gene29650.t1 AT5G63580 35.776 232 138 4 46 275 16 238 5.59e-39 140
MS.gene29650.t1 AT4G25420 33.716 261 159 7 24 277 39 292 6.49e-39 142
MS.gene29650.t1 AT4G21690 30.363 303 187 8 45 336 43 332 6.76e-39 143
MS.gene29650.t1 AT1G06620 33.208 265 168 5 14 277 27 283 8.93e-39 141
MS.gene29650.t1 AT3G19010 33.208 265 155 8 29 278 8 265 1.06e-38 141
MS.gene29650.t1 AT5G43935 31.544 298 166 8 46 336 16 282 2.53e-38 140
MS.gene29650.t1 AT1G06640 35.821 268 161 5 14 277 26 286 2.95e-38 140
MS.gene29650.t1 AT1G06640 35.985 264 158 5 14 273 26 282 5.85e-38 139
MS.gene29650.t1 AT1G30040 30.333 300 189 10 45 337 27 313 7.14e-38 140
MS.gene29650.t1 AT5G43440 34.444 270 165 7 14 279 24 285 1.29e-37 138
MS.gene29650.t1 AT3G50210 32.707 266 161 8 66 315 32 295 2.85e-37 138
MS.gene29650.t1 AT3G50210 32.707 266 161 8 66 315 32 295 2.85e-37 138
MS.gene29650.t1 AT3G50210 32.707 266 161 8 66 315 32 295 2.85e-37 138
MS.gene29650.t1 AT1G78440 30.164 305 178 12 49 337 18 303 5.97e-37 137
MS.gene29650.t1 AT2G30840 32.847 274 174 6 7 277 14 280 4.22e-36 134
MS.gene29650.t1 AT1G50960 28.896 308 199 8 34 337 24 315 4.97e-35 132
MS.gene29650.t1 AT5G51810 31.086 267 166 6 25 284 42 297 6.24e-35 131
MS.gene29650.t1 AT1G03400 29.620 368 197 11 9 336 15 360 1.82e-34 132
MS.gene29650.t1 AT2G34555 29.630 297 188 10 49 338 27 309 2.11e-34 130
MS.gene29650.t1 AT5G43450 33.457 269 162 7 14 277 24 280 3.90e-33 126
MS.gene29650.t1 AT3G49620 30.132 302 179 10 38 315 23 316 9.29e-33 127
MS.gene29650.t1 AT3G49630 29.897 291 172 10 49 315 9 291 3.35e-32 124
MS.gene29650.t1 AT3G49630 30.337 267 161 8 66 315 29 287 3.64e-32 124
MS.gene29650.t1 AT3G61400 32.374 278 174 8 7 277 18 288 5.20e-32 123
MS.gene29650.t1 AT5G59540 30.380 237 144 7 49 277 61 284 3.08e-30 118
MS.gene29650.t1 AT3G46500 28.197 305 200 9 45 336 10 308 3.71e-29 116
MS.gene29650.t1 AT5G58660 32.203 295 161 11 48 316 33 314 6.59e-29 116
MS.gene29650.t1 AT4G23340 34.286 315 169 13 41 339 2 294 1.12e-28 115
MS.gene29650.t1 AT1G04380 32.618 233 143 6 49 279 45 265 1.15e-28 113
MS.gene29650.t1 AT5G07480 35.079 191 111 3 158 340 43 228 1.23e-27 110
MS.gene29650.t1 AT3G46490 27.987 318 198 9 44 336 4 315 3.68e-27 110
MS.gene29650.t1 AT1G47990 28.115 313 188 11 42 337 8 300 1.28e-25 106
MS.gene29650.t1 AT1G02400 28.859 298 194 11 48 337 23 310 3.66e-25 105
MS.gene29650.t1 AT1G30040 29.583 240 149 10 45 277 27 253 5.12e-25 103
MS.gene29650.t1 AT3G46490 27.972 286 175 9 44 304 4 283 3.93e-24 102
MS.gene29650.t1 AT3G50210 33.939 165 103 3 156 315 50 213 7.80e-24 99.8
MS.gene29650.t1 AT3G47190 28.378 296 182 9 30 310 11 291 8.07e-24 101
MS.gene29650.t1 AT3G46500 28.470 281 172 12 45 307 10 279 1.92e-23 99.8
MS.gene29650.t1 AT3G49630 31.383 188 115 5 152 333 56 235 1.40e-22 96.7
MS.gene29650.t1 AT4G16765 30.493 223 142 6 125 336 15 235 4.29e-22 95.1
MS.gene29650.t1 AT4G16765 30.493 223 142 6 125 336 15 235 4.29e-22 95.1
MS.gene29650.t1 AT4G16765 30.493 223 142 6 125 336 15 235 4.29e-22 95.1
MS.gene29650.t1 AT5G58660 31.418 261 139 11 48 283 33 278 9.55e-22 94.7
MS.gene29650.t1 AT1G35190 31.061 264 157 11 72 314 29 288 9.71e-22 95.5
MS.gene29650.t1 AT4G16765 32.338 201 123 6 125 314 15 213 2.42e-21 92.4
MS.gene29650.t1 AT1G35190 31.679 262 135 11 72 314 29 265 3.56e-21 93.6
MS.gene29650.t1 AT1G14130 28.114 281 178 7 70 342 24 288 3.57e-21 93.6
MS.gene29650.t1 AT5G51310 28.906 256 157 8 67 305 17 264 3.94e-20 90.9
MS.gene29650.t1 AT1G14120 27.124 306 180 8 42 332 1 278 5.90e-20 90.1
MS.gene29650.t1 AT1G14120 27.124 306 180 8 42 332 1 278 5.90e-20 90.1
MS.gene29650.t1 AT1G14120 27.124 306 180 8 42 332 1 278 5.90e-20 90.1
MS.gene29650.t1 AT4G23340 37.500 176 101 6 171 339 3 176 3.60e-19 85.9
MS.gene29650.t1 AT3G46500 29.101 189 124 5 156 336 48 234 2.06e-17 81.6
MS.gene29650.t1 AT3G46500 29.101 189 124 5 156 336 48 234 2.06e-17 81.6
MS.gene29650.t1 AT3G46500 29.885 174 114 4 169 336 1 172 2.08e-17 80.5
MS.gene29650.t1 AT4G16770 30.833 240 142 10 43 267 16 246 3.03e-17 81.6
MS.gene29650.t1 AT4G03070 25.773 291 178 10 72 344 38 308 5.45e-17 81.6
MS.gene29650.t1 AT1G52820 24.422 303 201 8 49 339 12 298 9.89e-17 80.9
MS.gene29650.t1 AT1G28030 27.419 310 197 11 38 333 2 297 4.74e-16 79.0
MS.gene29650.t1 AT4G22870 39.796 98 55 2 246 339 2 99 4.03e-15 71.6
MS.gene29650.t1 AT4G16765 30.994 171 106 5 125 284 15 184 4.73e-15 73.6
MS.gene29650.t1 AT3G46480 27.500 280 170 10 63 331 6 263 6.03e-15 75.1
MS.gene29650.t1 AT4G16765 37.607 117 66 3 225 336 75 189 9.64e-15 73.2
MS.gene29650.t1 AT1G52800 26.246 301 194 11 39 328 1 284 1.69e-13 71.2
MS.gene29650.t1 AT4G22870 34.906 106 62 3 241 339 35 140 2.54e-13 67.8
MS.gene29650.t1 AT3G46500 28.834 163 100 7 156 307 48 205 3.33e-12 66.2
MS.gene29650.t1 AT3G46500 27.225 191 101 7 156 336 48 210 5.28e-12 65.5
MS.gene29650.t1 AT3G46500 29.530 149 91 6 168 307 31 174 8.33e-12 64.3
MS.gene29650.t1 AT3G46500 29.530 149 91 6 168 307 31 174 8.33e-12 64.3

Find 103 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTCCTGATTGGTAATT+TGG 0.022757 5.1:-64832522 MS.gene29650:CDS
ATCTTTGTACCCTCACTTTC+TGG 0.085591 5.1:+64832576 None:intergenic
CTCTATTGGAATGTCACTTT+TGG 0.185657 5.1:+64832997 None:intergenic
AAAGATTGAACTGGGATTAT+TGG 0.191708 5.1:+64836870 None:intergenic
GTCAATTATTGGGATATTAT+TGG 0.196961 5.1:+64836761 None:intergenic
CTTCTCTGCCTCCCTCTTGC+AGG 0.218861 5.1:-64836422 MS.gene29650:intron
AAACCTCTAAGGTCAATTAT+TGG 0.250455 5.1:+64836750 None:intergenic
AATGCATTTATTGTCAATAT+TGG 0.257707 5.1:-64834215 MS.gene29650:CDS
AGGGAGGTGTTTGATGAATA+TGG 0.259252 5.1:-64834512 MS.gene29650:CDS
CAACTCTGGCTGTGGACATT+TGG 0.276113 5.1:+64834358 None:intergenic
TTATCTTCCTTTGTCTTTGA+AGG 0.276389 5.1:-64836460 MS.gene29650:CDS
GGGTATAGGGCAGGTTTATC+TGG 0.280408 5.1:+64832953 None:intergenic
AAGTTCGTAAAGGTGATAAT+TGG 0.282376 5.1:-64834259 MS.gene29650:CDS
CTCTTCCTGATTGGTAATTT+GGG 0.303010 5.1:-64832521 MS.gene29650:CDS
CAATATTGGTGATCAAATTC+AGG 0.308629 5.1:-64834201 MS.gene29650:intron
AACTCTGGCTGTGGACATTT+GGG 0.311428 5.1:+64834359 None:intergenic
CCACTTCTCAACCGATGATT+GGG 0.335482 5.1:-64832492 MS.gene29650:CDS
ATCCCAATAATTGACCTTAG+AGG 0.336722 5.1:-64836753 MS.gene29650:CDS
CTATGACCTTTGATGAATAT+AGG 0.350688 5.1:-64832928 MS.gene29650:CDS
CAAAGGTCATAGCAGGGTAT+AGG 0.364824 5.1:+64832939 None:intergenic
CTTTCGGATAAAGATTGAAC+TGG 0.371330 5.1:+64836861 None:intergenic
GATTGAATCTATGCAACTTT+CGG 0.372204 5.1:+64836845 None:intergenic
AACCTCTAAGGTCAATTATT+GGG 0.373427 5.1:+64836751 None:intergenic
TCTAAAATAGAGTTTATTGA+TGG 0.387411 5.1:+64836789 None:intergenic
CCCACTTCTCAACCGATGAT+TGG 0.393246 5.1:-64832493 MS.gene29650:CDS
AGAAAGGTGCTATTCTTGAT+TGG 0.399483 5.1:-64836503 MS.gene29650:CDS
ACAATAAATGCATTACGAAC+AGG 0.405344 5.1:+64834224 None:intergenic
GATGCATGCACCATGATTCC+AGG 0.407244 5.1:-64832467 MS.gene29650:CDS
AAAGGTCATAGCAGGGTATA+GGG 0.409002 5.1:+64832940 None:intergenic
TGAACTGGGATTATTGGTTC+AGG 0.411262 5.1:+64836876 None:intergenic
TAAAGGTGATAATTGGATTA+CGG 0.411535 5.1:-64834252 MS.gene29650:CDS
AAGATTGCATGTGAAATTGA+TGG 0.412397 5.1:-64832558 MS.gene29650:CDS
AGCCTCAGAGATTTGCTTGA+AGG 0.421693 5.1:+64836695 None:intergenic
CAAACATTGCCCTGGAATCA+TGG 0.422370 5.1:+64832457 None:intergenic
TTGGTTCAGGCCAATCTTGT+GGG 0.423737 5.1:+64836889 None:intergenic
TGGTGTTAGCCATGATTTGA+TGG 0.425426 5.1:-64836637 MS.gene29650:CDS
TCTATCTATAAACCTTGGAT+TGG 0.425871 5.1:-64834450 MS.gene29650:CDS
CTGCAAGAGGGAGGCAGAGA+AGG 0.432067 5.1:+64836423 None:intergenic
AAATGATCAGCCCACAAGAT+TGG 0.435138 5.1:-64836899 MS.gene29650:CDS
AATAGAGCCAGCAAAAGAAT+TGG 0.438206 5.1:-64832981 MS.gene29650:CDS
AGACCATGTACTTGATCATC+TGG 0.440312 5.1:+64834284 None:intergenic
GGGGTTTGATATATCTTTGA+GGG 0.441698 5.1:+64836823 None:intergenic
TAGTACTATATAAACCTCTA+AGG 0.442382 5.1:+64836739 None:intergenic
GATGTTTGCCTCTTCCTGAT+TGG 0.442393 5.1:-64832530 MS.gene29650:CDS
AAGATATTGGTGCTTGCATA+AGG 0.450245 5.1:-64834394 MS.gene29650:CDS
CCACAGCCAGAGTTGACTCT+TGG 0.456190 5.1:-64834350 MS.gene29650:CDS
ATTGGTTCAGGCCAATCTTG+TGG 0.457991 5.1:+64836888 None:intergenic
TGGATTTAGCTAAGGAAACT+TGG 0.461744 5.1:-64836617 MS.gene29650:CDS
CCCAATCATCGGTTGAGAAG+TGG 0.464312 5.1:+64832492 None:intergenic
TGATGAATATGGGATAGAAT+TGG 0.475949 5.1:-64834501 MS.gene29650:CDS
GAAAATTCTCTTCCAATCCA+AGG 0.476253 5.1:+64834438 None:intergenic
TTCTAAGCAATGCAATCTAC+AGG 0.476607 5.1:-64833087 MS.gene29650:CDS
CTCTGAGGCTTGTAAAGAGT+GGG 0.480774 5.1:-64836682 MS.gene29650:CDS
CTTTGAAGGACTACAACAAA+TGG 0.482191 5.1:-64836446 MS.gene29650:CDS
TATTCATCAAAGGTCATAGC+AGG 0.486350 5.1:+64832932 None:intergenic
GACTACCCAAATTACCAATC+AGG 0.492773 5.1:+64832516 None:intergenic
GGGAGGTGTTTGATGAATAT+GGG 0.498922 5.1:-64834511 MS.gene29650:CDS
AAAGTTCTATCTATAAACCT+TGG 0.499746 5.1:-64834455 MS.gene29650:CDS
TATAATTGTTTCACTTCCAT+AGG 0.501870 5.1:+64836576 None:intergenic
TAGCTAAATCCATCAAATCA+TGG 0.503472 5.1:+64836628 None:intergenic
ATCAATTAAGCCAGAAAGTG+AGG 0.518620 5.1:-64832586 MS.gene29650:CDS
TGATTTGATGGATTTAGCTA+AGG 0.519818 5.1:-64836625 MS.gene29650:CDS
TTATCATCACACTCAGATCC+AGG 0.521719 5.1:-64834326 MS.gene29650:CDS
TTATTGATGGACGGTCACTA+AGG 0.528777 5.1:+64836802 None:intergenic
TTCTTTCAAATTGTTAACCA+TGG 0.533817 5.1:-64836657 MS.gene29650:CDS
AAGGTTGAAGCTTGTTCATG+TGG 0.535462 5.1:+64836714 None:intergenic
AGGGGTTTGATATATCTTTG+AGG 0.539325 5.1:+64836822 None:intergenic
AGTAGACTTGGTGTTAAGAA+AGG 0.539816 5.1:-64836519 MS.gene29650:CDS
CCAAATTACCAATCAGGAAG+AGG 0.540752 5.1:+64832522 None:intergenic
CCATATTACAAACATTGCCC+TGG 0.541395 5.1:+64832449 None:intergenic
TATTGATGGACGGTCACTAA+GGG 0.546407 5.1:+64836803 None:intergenic
CCAATCATCGGTTGAGAAGT+GGG 0.548694 5.1:+64832493 None:intergenic
GAAGGGTATGGTAGTAGACT+TGG 0.550629 5.1:-64836531 MS.gene29650:CDS
GTCATAGCAGGGTATAGGGC+AGG 0.556674 5.1:+64832944 None:intergenic
TTACCAGATGATCAAGTACA+TGG 0.559165 5.1:-64834287 MS.gene29650:CDS
CCAAGAGTCAACTCTGGCTG+TGG 0.561608 5.1:+64834350 None:intergenic
GGGATTGTAGAAGAAAGCTA+AGG 0.562257 5.1:+64833018 None:intergenic
TTGTAGTCCTTCAAAGACAA+AGG 0.564851 5.1:+64836453 None:intergenic
GCATGCATCACCCCAATCAT+CGG 0.576316 5.1:+64832481 None:intergenic
GAAAAGCCTATATTCATCAA+AGG 0.580964 5.1:+64832922 None:intergenic
CATGGTCTTCAAGTTCGTAA+AGG 0.581161 5.1:-64834269 MS.gene29650:CDS
TTTCGGATAAAGATTGAACT+GGG 0.585395 5.1:+64836862 None:intergenic
TCTCTGAGGCTTGTAAAGAG+TGG 0.589060 5.1:-64836683 MS.gene29650:CDS
AAATAGAGTTTATTGATGGA+CGG 0.601584 5.1:+64836793 None:intergenic
TAAGTACTTAAACCTGCAAG+AGG 0.610922 5.1:+64836410 None:intergenic
ATGCATGCACCATGATTCCA+GGG 0.616013 5.1:-64832466 MS.gene29650:CDS
AACAAAAGAGTAATGCCACC+TGG 0.618434 5.1:+64834308 None:intergenic
GATAAACCAAGAGTCAACTC+TGG 0.620386 5.1:+64834344 None:intergenic
TCAAATCATGGCTAACACCA+TGG 0.620406 5.1:+64836640 None:intergenic
TACTTAAACCTGCAAGAGGG+AGG 0.625938 5.1:+64836414 None:intergenic
CACTTCTCAACCGATGATTG+GGG 0.638659 5.1:-64832491 MS.gene29650:CDS
TCAATTAAGCCAGAAAGTGA+GGG 0.644139 5.1:-64832585 MS.gene29650:CDS
ATTGATGGACGGTCACTAAG+GGG 0.650972 5.1:+64836804 None:intergenic
AGATATTGGTGCTTGCATAA+GGG 0.652882 5.1:-64834393 MS.gene29650:CDS
AACCTTCAAGCAAATCTCTG+AGG 0.652889 5.1:-64836697 MS.gene29650:CDS
AATTGGTGAAGTTATGTGAG+AGG 0.660567 5.1:-64834484 MS.gene29650:CDS
CAATCATCGGTTGAGAAGTG+GGG 0.663077 5.1:+64832494 None:intergenic
ATTCATCAAAGGTCATAGCA+GGG 0.668718 5.1:+64832933 None:intergenic
AGGTTGAAGCTTGTTCATGT+GGG 0.672418 5.1:+64836715 None:intergenic
AAGTACTTAAACCTGCAAGA+GGG 0.673362 5.1:+64836411 None:intergenic
TCTGAGGCTTGTAAAGAGTG+GGG 0.685796 5.1:-64836681 MS.gene29650:CDS
ATTAGAATGAGGGGTCCATG+TGG 0.696122 5.1:-64832899 MS.gene29650:CDS
TCATCACACTCAGATCCAGG+TGG 0.758978 5.1:-64834323 MS.gene29650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCATTCATACAATTATA+TGG + chr5.1:64836177-64836196 None:intergenic 15.0%
!!! ATAGTATTACGATTTTAAAT+GGG - chr5.1:64835426-64835445 MS.gene29650:intron 15.0%
!!! ATATTCTTATTGATAATGTT+TGG - chr5.1:64835191-64835210 MS.gene29650:intron 15.0%
!! AAAAAATGTTTAGTCAGTTT+GGG - chr5.1:64833869-64833888 MS.gene29650:intron 20.0%
!! AAATTTAGAGATTAAAGAGT+TGG + chr5.1:64834722-64834741 None:intergenic 20.0%
!! AATAGATGAAGTATACAATT+TGG - chr5.1:64833418-64833437 MS.gene29650:intron 20.0%
!! AATGCATTTATTGTCAATAT+TGG - chr5.1:64835136-64835155 MS.gene29650:intron 20.0%
!! ATGAAAATTTAGTCATTTGT+GGG + chr5.1:64836034-64836053 None:intergenic 20.0%
!! CGAAATGCATAAATTTATTA+TGG - chr5.1:64833191-64833210 MS.gene29650:intron 20.0%
!! TTAGCAAAGAAAATTAGTTA+TGG - chr5.1:64832986-64833005 MS.gene29650:CDS 20.0%
!!! AATTTTCTTCAAAATGCTTT+TGG - chr5.1:64834929-64834948 MS.gene29650:intron 20.0%
!!! ATCTTAAATTGTTGTTAGAT+AGG - chr5.1:64836715-64836734 MS.gene29650:CDS 20.0%
!!! CATAGTATTACGATTTTAAA+TGG - chr5.1:64835425-64835444 MS.gene29650:intron 20.0%
!!! TCTAAAATAGAGTTTATTGA+TGG + chr5.1:64832565-64832584 None:intergenic 20.0%
!!! TGTTTATTTTGTGTTTGATA+AGG - chr5.1:64836241-64836260 MS.gene29650:intron 20.0%
!!! TTCATCTATTTTGTCAAATA+GGG + chr5.1:64833408-64833427 None:intergenic 20.0%
! AAAGTTCTATCTATAAACCT+TGG - chr5.1:64834896-64834915 MS.gene29650:intron 25.0%
! AAATAGAGTTTATTGATGGA+CGG + chr5.1:64832561-64832580 None:intergenic 25.0%
! AAGGATACAAATTTGAATGT+AGG - chr5.1:64834819-64834838 MS.gene29650:intron 25.0%
! AATAATATCAACTAGCTAGA+AGG + chr5.1:64836690-64836709 None:intergenic 25.0%
! AATGAGATGTATCTTTCAAA+AGG + chr5.1:64835349-64835368 None:intergenic 25.0%
! AATTATTGGTCAACATACAT+AGG + chr5.1:64835739-64835758 None:intergenic 25.0%
! AGGATACAAATTTGAATGTA+GGG - chr5.1:64834820-64834839 MS.gene29650:intron 25.0%
! AGTATCTTGCTTTCAATTAT+TGG + chr5.1:64835753-64835772 None:intergenic 25.0%
! ATCTCTTCATTTGTTCAATT+TGG + chr5.1:64833575-64833594 None:intergenic 25.0%
! ATGAATCTCATGAAAATCAA+AGG + chr5.1:64834332-64834351 None:intergenic 25.0%
! ATTTAGATACAAAAGGTTGA+GGG + chr5.1:64834293-64834312 None:intergenic 25.0%
! CAAAAAATGTTTAGTCAGTT+TGG - chr5.1:64833868-64833887 MS.gene29650:intron 25.0%
! CATTCATACAATTATATGGA+AGG + chr5.1:64836173-64836192 None:intergenic 25.0%
! CTTAGAAAATTAAAGGCTAA+GGG + chr5.1:64834130-64834149 None:intergenic 25.0%
! CTTTGTAAAGAATTCATTGA+TGG + chr5.1:64833936-64833955 None:intergenic 25.0%
! GAAGATCCTTAGAAAATTAA+AGG + chr5.1:64834137-64834156 None:intergenic 25.0%
! GATGAAAATTTAGTCATTTG+TGG + chr5.1:64836035-64836054 None:intergenic 25.0%
! GTCAATTATTGGGATATTAT+TGG + chr5.1:64832593-64832612 None:intergenic 25.0%
! TAAAGGTGATAATTGGATTA+CGG - chr5.1:64835099-64835118 MS.gene29650:intron 25.0%
! TAGTACTATATAAACCTCTA+AGG + chr5.1:64832615-64832634 None:intergenic 25.0%
! TATAATTGTTTCACTTCCAT+AGG + chr5.1:64832778-64832797 None:intergenic 25.0%
! TATTTAGATACAAAAGGTTG+AGG + chr5.1:64834294-64834313 None:intergenic 25.0%
! TTACAGTCACAAATTAACTT+AGG + chr5.1:64835689-64835708 None:intergenic 25.0%
! TTCTTTCAAATTGTTAACCA+TGG - chr5.1:64832694-64832713 MS.gene29650:intron 25.0%
! TTGAGAAATAGGTAGAAATT+AGG + chr5.1:64834011-64834030 None:intergenic 25.0%
! TTTGAATTGTGTACATACAA+CGG - chr5.1:64833371-64833390 MS.gene29650:intron 25.0%
!! AATCATTGAGTCTTTTGTTA+AGG + chr5.1:64834042-64834061 None:intergenic 25.0%
!! ATCATTGAGTCTTTTGTTAA+GGG + chr5.1:64834041-64834060 None:intergenic 25.0%
!! CTTCATCTATTTTGTCAAAT+AGG + chr5.1:64833409-64833428 None:intergenic 25.0%
!! TTAGGGTATTTAGATACAAA+AGG + chr5.1:64834300-64834319 None:intergenic 25.0%
!!! ATGATTTTGGTTCATAAATC+GGG + chr5.1:64834536-64834555 None:intergenic 25.0%
!!! CAAACTGACTAAACATTTTT+TGG + chr5.1:64833870-64833889 None:intergenic 25.0%
!!! CATGATTTTGGTTCATAAAT+CGG + chr5.1:64834537-64834556 None:intergenic 25.0%
!!! CTATTGAATTGTCATTTTGT+GGG - chr5.1:64834782-64834801 MS.gene29650:intron 25.0%
!!! TCTATTGAATTGTCATTTTG+TGG - chr5.1:64834781-64834800 MS.gene29650:intron 25.0%
!!! TTGTTATTCGTCAGATTTTT+TGG - chr5.1:64835313-64835332 MS.gene29650:intron 25.0%
!!! TTTGTATTTTAGCAAAAACG+TGG + chr5.1:64834581-64834600 None:intergenic 25.0%
AAAGATTGAACTGGGATTAT+TGG + chr5.1:64832484-64832503 None:intergenic 30.0%
AACTCACCAAAAACTTATGA+AGG - chr5.1:64832802-64832821 MS.gene29650:intron 30.0%
AAGATTGCATGTGAAATTGA+TGG - chr5.1:64836793-64836812 MS.gene29650:CDS 30.0%
AAGTTCGTAAAGGTGATAAT+TGG - chr5.1:64835092-64835111 MS.gene29650:intron 30.0%
AATCTCATGAAAATCAAAGG+AGG + chr5.1:64834329-64834348 None:intergenic 30.0%
ACAAGCTACAAAAATAGTAG+AGG + chr5.1:64833256-64833275 None:intergenic 30.0%
ACAATAAATGCATTACGAAC+AGG + chr5.1:64835130-64835149 None:intergenic 30.0%
ACATGAAATTGTTGCATGAT+TGG + chr5.1:64834431-64834450 None:intergenic 30.0%
ACTCACCAAAAACTTATGAA+GGG - chr5.1:64832803-64832822 MS.gene29650:intron 30.0%
AGCGTTTAGAAATTCATAGT+TGG + chr5.1:64835958-64835977 None:intergenic 30.0%
AGTCACAAATTAACTTAGGA+AGG + chr5.1:64835685-64835704 None:intergenic 30.0%
ATACAAATTTGAATGTAGGG+AGG - chr5.1:64834823-64834842 MS.gene29650:intron 30.0%
ATCTCATGAAAATCAAAGGA+GGG + chr5.1:64834328-64834347 None:intergenic 30.0%
ATGGATCATTTCGATATACA+TGG - chr5.1:64833210-64833229 MS.gene29650:intron 30.0%
CCTTAGAAAATTAAAGGCTA+AGG + chr5.1:64834131-64834150 None:intergenic 30.0%
CTATGACCTTTGATGAATAT+AGG - chr5.1:64836423-64836442 MS.gene29650:CDS 30.0%
CTTACTCAACAAATTAGTCA+AGG - chr5.1:64834356-64834375 MS.gene29650:CDS 30.0%
GAAAAGCCTATATTCATCAA+AGG + chr5.1:64836432-64836451 None:intergenic 30.0%
GATTGAATCTATGCAACTTT+CGG + chr5.1:64832509-64832528 None:intergenic 30.0%
GCGTTTAGAAATTCATAGTT+GGG + chr5.1:64835957-64835976 None:intergenic 30.0%
GTGGGTAACATTAATACTTA+AGG - chr5.1:64834800-64834819 MS.gene29650:intron 30.0%
GTGTATGTTTAGTATTACGA+TGG - chr5.1:64835911-64835930 MS.gene29650:intron 30.0%
GTTTGTTTCAACAAAAAACG+TGG + chr5.1:64834514-64834533 None:intergenic 30.0%
TACATAGGATAAGTTGTGAT+TGG + chr5.1:64835724-64835743 None:intergenic 30.0%
TAGCTAAATCCATCAAATCA+TGG + chr5.1:64832726-64832745 None:intergenic 30.0%
TCTATCTATAAACCTTGGAT+TGG - chr5.1:64834901-64834920 MS.gene29650:intron 30.0%
TGATGAATATGGGATAGAAT+TGG - chr5.1:64834850-64834869 MS.gene29650:intron 30.0%
TGGATCATTTCGATATACAT+GGG - chr5.1:64833211-64833230 MS.gene29650:intron 30.0%
TTATATGGAAGGCAAAATCT+TGG + chr5.1:64836162-64836181 None:intergenic 30.0%
TTATCTTCCTTTGTCTTTGA+AGG - chr5.1:64832891-64832910 MS.gene29650:CDS 30.0%
TTCATTGACACAGAAACAAA+CGG + chr5.1:64836566-64836585 None:intergenic 30.0%
TTGAATTGTGTACATACAAC+GGG - chr5.1:64833372-64833391 MS.gene29650:intron 30.0%
TTTCGGATAAAGATTGAACT+GGG + chr5.1:64832492-64832511 None:intergenic 30.0%
! AATCAAAGGAGGGAATTTTT+AGG + chr5.1:64834318-64834337 None:intergenic 30.0%
! AGAATTCATTGATGGTAAAG+CGG + chr5.1:64833928-64833947 None:intergenic 30.0%
! ATCAAAGGAGGGAATTTTTA+GGG + chr5.1:64834317-64834336 None:intergenic 30.0%
! ATCTATTTTGTCAAATAGGG+CGG + chr5.1:64833405-64833424 None:intergenic 30.0%
! CAATATTGGTGATCAAATTC+AGG - chr5.1:64835150-64835169 MS.gene29650:intron 30.0%
! GAGTTTTACAGAATCATAGT+AGG + chr5.1:64836624-64836643 None:intergenic 30.0%
! GTAGAAATTAGGTTTGTTCT+TGG + chr5.1:64834000-64834019 None:intergenic 30.0%
! TATTCTTTGATTCGATTGTG+AGG + chr5.1:64833812-64833831 None:intergenic 30.0%
! TCATTGAGTCTTTTGTTAAG+GGG + chr5.1:64834040-64834059 None:intergenic 30.0%
! TCTAGAGTTGAGAAACAATT+GGG + chr5.1:64834084-64834103 None:intergenic 30.0%
! TTTCTTCAAAATGCTTTTGG+AGG - chr5.1:64834932-64834951 MS.gene29650:intron 30.0%
!! AAACCTCTAAGGTCAATTAT+TGG + chr5.1:64832604-64832623 None:intergenic 30.0%
!! AACCTCTAAGGTCAATTATT+GGG + chr5.1:64832603-64832622 None:intergenic 30.0%
!! ATCATGCAAAAGTATTGCAA+TGG - chr5.1:64835869-64835888 MS.gene29650:intron 30.0%
!! CCTTAGCCTTTAATTTTCTA+AGG - chr5.1:64834128-64834147 MS.gene29650:intron 30.0%
!! TGATTTGATGGATTTAGCTA+AGG - chr5.1:64832726-64832745 MS.gene29650:intron 30.0%
!! TTCTAGAGTTGAGAAACAAT+TGG + chr5.1:64834085-64834104 None:intergenic 30.0%
!! TTTCTAAGGATCTTCTCTTT+TGG - chr5.1:64834142-64834161 MS.gene29650:intron 30.0%
!! TTTGTAGCTTGTTCATTAAG+AGG - chr5.1:64833264-64833283 MS.gene29650:intron 30.0%
!!! AAAAAGTTGGTGCCTTTTAA+AGG + chr5.1:64834205-64834224 None:intergenic 30.0%
!!! TATTCGTCAGATTTTTTGGA+TGG - chr5.1:64835317-64835336 MS.gene29650:intron 30.0%
!!! TCAATTTTTTCACTTGCCTA+TGG - chr5.1:64832759-64832778 MS.gene29650:intron 30.0%
!!! TCTATTGGAATGTCACTTTT+GGG + chr5.1:64836356-64836375 None:intergenic 30.0%
AAACTTCAAGATGTGAATCC+TGG + chr5.1:64834253-64834272 None:intergenic 35.0%
AACACCTAAGAATTGCATCT+AGG - chr5.1:64836090-64836109 MS.gene29650:intron 35.0%
AAGTACTTAAACCTGCAAGA+GGG + chr5.1:64832943-64832962 None:intergenic 35.0%
AATAGAGCCAGCAAAAGAAT+TGG - chr5.1:64836370-64836389 MS.gene29650:intron 35.0%
AATATCAACTAGCTAGAAGG+AGG + chr5.1:64836687-64836706 None:intergenic 35.0%
AATTGGTGAAGTTATGTGAG+AGG - chr5.1:64834867-64834886 MS.gene29650:intron 35.0%
ACACCTAAGAATTGCATCTA+GGG - chr5.1:64836091-64836110 MS.gene29650:intron 35.0%
AGGGGTTTGATATATCTTTG+AGG + chr5.1:64832532-64832551 None:intergenic 35.0%
ATCAATTAAGCCAGAAAGTG+AGG - chr5.1:64836765-64836784 MS.gene29650:CDS 35.0%
ATCCCAATAATTGACCTTAG+AGG - chr5.1:64832598-64832617 MS.gene29650:CDS 35.0%
ATTCATCAAAGGTCATAGCA+GGG + chr5.1:64836421-64836440 None:intergenic 35.0%
CAAACCTTATCACACTTAGT+GGG - chr5.1:64834642-64834661 MS.gene29650:intron 35.0%
CACAAAGACTCTCCTTTAAA+AGG - chr5.1:64834190-64834209 MS.gene29650:intron 35.0%
CATCGTCACAAATTCAATGA+CGG - chr5.1:64833034-64833053 MS.gene29650:CDS 35.0%
CCAAAAACTTATGAAGGGTA+TGG - chr5.1:64832808-64832827 MS.gene29650:intron 35.0%
CGGCTTGTGATTAAATGTTA+AGG + chr5.1:64836655-64836674 None:intergenic 35.0%
CTAGAAGGAGGTTATATACA+CGG + chr5.1:64836675-64836694 None:intergenic 35.0%
CTTTCGGATAAAGATTGAAC+TGG + chr5.1:64832493-64832512 None:intergenic 35.0%
GAAAATTAAAGGCTAAGGGT+TGG + chr5.1:64834126-64834145 None:intergenic 35.0%
GAAAATTCTCTTCCAATCCA+AGG + chr5.1:64834916-64834935 None:intergenic 35.0%
GATATGCATGTTTGGATCAA+CGG - chr5.1:64836510-64836529 MS.gene29650:CDS 35.0%
GGGGTTTGATATATCTTTGA+GGG + chr5.1:64832531-64832550 None:intergenic 35.0%
TAAGTACTTAAACCTGCAAG+AGG + chr5.1:64832944-64832963 None:intergenic 35.0%
TATTCATCAAAGGTCATAGC+AGG + chr5.1:64836422-64836441 None:intergenic 35.0%
TCAAACCTTATCACACTTAG+TGG - chr5.1:64834641-64834660 MS.gene29650:intron 35.0%
TCAATGATTTCACTCAGTCA+AGG - chr5.1:64834053-64834072 MS.gene29650:intron 35.0%
TCAATTAAGCCAGAAAGTGA+GGG - chr5.1:64836766-64836785 MS.gene29650:CDS 35.0%
TCCAAACATGCATATCATCT+CGG + chr5.1:64836506-64836525 None:intergenic 35.0%
TGGATTTAGCTAAGGAAACT+TGG - chr5.1:64832734-64832753 MS.gene29650:intron 35.0%
TTACCAGATGATCAAGTACA+TGG - chr5.1:64835064-64835083 MS.gene29650:intron 35.0%
TTCATTAAGAGGTAGGTAGT+TGG - chr5.1:64833275-64833294 MS.gene29650:intron 35.0%
TTCTAAGCAATGCAATCTAC+AGG - chr5.1:64836264-64836283 MS.gene29650:intron 35.0%
TTGTAGTCCTTCAAAGACAA+AGG + chr5.1:64832901-64832920 None:intergenic 35.0%
TTTCAACAAAAAACGTGGCA+TGG + chr5.1:64834509-64834528 None:intergenic 35.0%
TTTCCATAGTAGGTCATTGT+CGG + chr5.1:64833895-64833914 None:intergenic 35.0%
! AAGATATTGGTGCTTGCATA+AGG - chr5.1:64834957-64834976 MS.gene29650:intron 35.0%
! AGAGATCTCTTTTCCATAGT+AGG + chr5.1:64833905-64833924 None:intergenic 35.0%
! AGATATTGGTGCTTGCATAA+GGG - chr5.1:64834958-64834977 MS.gene29650:intron 35.0%
! CCATACCCTTCATAAGTTTT+TGG + chr5.1:64832811-64832830 None:intergenic 35.0%
! CTCTTCCTGATTGGTAATTT+GGG - chr5.1:64836830-64836849 MS.gene29650:CDS 35.0%
! CTTTGAAGGACTACAACAAA+TGG - chr5.1:64832905-64832924 MS.gene29650:CDS 35.0%
! TCTACTTGAGATTTTCCACA+TGG + chr5.1:64836470-64836489 None:intergenic 35.0%
! TGTCATTGATGATACTTGAG+AGG - chr5.1:64836126-64836145 MS.gene29650:intron 35.0%
!! AGAAAGGTGCTATTCTTGAT+TGG - chr5.1:64832848-64832867 MS.gene29650:intron 35.0%
!! AGTAGACTTGGTGTTAAGAA+AGG - chr5.1:64832832-64832851 MS.gene29650:intron 35.0%
!! TAGCTTGTTCATTAAGAGGT+AGG - chr5.1:64833268-64833287 MS.gene29650:intron 35.0%
!!! AATTCTTTTGCTGGCTCTAT+TGG + chr5.1:64836371-64836390 None:intergenic 35.0%
!!! CTCTATTGGAATGTCACTTT+TGG + chr5.1:64836357-64836376 None:intergenic 35.0%
!!! TCAGATTTTTTGGATGGTTG+TGG - chr5.1:64835323-64835342 MS.gene29650:intron 35.0%
AAAGGTCATAGCAGGGTATA+GGG + chr5.1:64836414-64836433 None:intergenic 40.0%
AACAAAAAACGTGGCATGGA+GGG + chr5.1:64834505-64834524 None:intergenic 40.0%
AACAAAAGAGTAATGCCACC+TGG + chr5.1:64835046-64835065 None:intergenic 40.0%
AACCTTCAAGCAAATCTCTG+AGG - chr5.1:64832654-64832673 MS.gene29650:intron 40.0%
ACAAAAGGTTGAGGGTCTTT+GGG + chr5.1:64834285-64834304 None:intergenic 40.0%
ACATTGCTACAGGGTTAAGA+AGG - chr5.1:64835595-64835614 MS.gene29650:intron 40.0%
AGACCATGTACTTGATCATC+TGG + chr5.1:64835070-64835089 None:intergenic 40.0%
AGGGGAAGAGATTGAGAAAT+AGG + chr5.1:64834022-64834041 None:intergenic 40.0%
ATATACATGGGTGATGTGCT+AGG - chr5.1:64833223-64833242 MS.gene29650:intron 40.0%
ATCTTTGTACCCTCACTTTC+TGG + chr5.1:64836778-64836797 None:intergenic 40.0%
CCAAATTACCAATCAGGAAG+AGG + chr5.1:64836832-64836851 None:intergenic 40.0%
CTACAGGGTTAAGAAGGATA+GGG - chr5.1:64835601-64835620 MS.gene29650:intron 40.0%
CTACCCTAGATGCAATTCTT+AGG + chr5.1:64836097-64836116 None:intergenic 40.0%
GACTACCCAAATTACCAATC+AGG + chr5.1:64836838-64836857 None:intergenic 40.0%
GATAAACCAAGAGTCAACTC+TGG + chr5.1:64835010-64835029 None:intergenic 40.0%
GGATAAGTTGTGATTGGTAG+AGG + chr5.1:64835718-64835737 None:intergenic 40.0%
GGGATTGTAGAAGAAAGCTA+AGG + chr5.1:64836336-64836355 None:intergenic 40.0%
TACAAAAGGTTGAGGGTCTT+TGG + chr5.1:64834286-64834305 None:intergenic 40.0%
TCAAATCATGGCTAACACCA+TGG + chr5.1:64832714-64832733 None:intergenic 40.0%
TCCGAGATGATATGCATGTT+TGG - chr5.1:64836502-64836521 MS.gene29650:CDS 40.0%
TCTTAACCCTGTAGCAATGT+GGG + chr5.1:64835595-64835614 None:intergenic 40.0%
TGATGCATGAATCTGTCACA+TGG - chr5.1:64835232-64835251 MS.gene29650:intron 40.0%
TGCATGATTGGAACAAATCG+TGG + chr5.1:64834419-64834438 None:intergenic 40.0%
TTATCATCACACTCAGATCC+AGG - chr5.1:64835025-64835044 MS.gene29650:intron 40.0%
TTCTTAACCCTGTAGCAATG+TGG + chr5.1:64835596-64835615 None:intergenic 40.0%
! AAGGTTGAAGCTTGTTCATG+TGG + chr5.1:64832640-64832659 None:intergenic 40.0%
! AGGTTGAAGCTTGTTCATGT+GGG + chr5.1:64832639-64832658 None:intergenic 40.0%
! CATGGTCTTCAAGTTCGTAA+AGG - chr5.1:64835082-64835101 MS.gene29650:intron 40.0%
! CCTCTTCCTGATTGGTAATT+TGG - chr5.1:64836829-64836848 MS.gene29650:CDS 40.0%
! GAGAAATCGTGGCATGATTT+TGG + chr5.1:64834549-64834568 None:intergenic 40.0%
! GGCTTTACCAATTCTTTTGC+TGG + chr5.1:64836380-64836399 None:intergenic 40.0%
! TATTGATGGACGGTCACTAA+GGG + chr5.1:64832551-64832570 None:intergenic 40.0%
! TGGTGTTAGCCATGATTTGA+TGG - chr5.1:64832714-64832733 MS.gene29650:intron 40.0%
! TTAGGAAGGTAAAAGCACGA+TGG + chr5.1:64835671-64835690 None:intergenic 40.0%
! TTATTGATGGACGGTCACTA+AGG + chr5.1:64832552-64832571 None:intergenic 40.0%
!! AGGGAGGTGTTTGATGAATA+TGG - chr5.1:64834839-64834858 MS.gene29650:intron 40.0%
!! GCTTTTGGAGGTGAAGATAT+TGG - chr5.1:64834944-64834963 MS.gene29650:intron 40.0%
!! GGGAGGTGTTTGATGAATAT+GGG - chr5.1:64834840-64834859 MS.gene29650:intron 40.0%
!! TGAACTGGGATTATTGGTTC+AGG + chr5.1:64832478-64832497 None:intergenic 40.0%
!!! CTAAGGGTTGGTTCTCTTTT+GGG + chr5.1:64834114-64834133 None:intergenic 40.0%
AAATCGTGGCACGATTTGAC+AGG + chr5.1:64834405-64834424 None:intergenic 45.0%
AACTCTGGCTGTGGACATTT+GGG + chr5.1:64834995-64835014 None:intergenic 45.0%
AATCCTGGAGAGCCAAAAGA+AGG + chr5.1:64834238-64834257 None:intergenic 45.0%
ACATTTGCCCACATTGCTAC+AGG - chr5.1:64835585-64835604 MS.gene29650:intron 45.0%
AGCAAAAACGTGGCACGATT+TGG + chr5.1:64834571-64834590 None:intergenic 45.0%
AGCCAAAAGAAGGGACTCTT+GGG + chr5.1:64834228-64834247 None:intergenic 45.0%
AGGGACTCTTGGGAAAAAGT+TGG + chr5.1:64834218-64834237 None:intergenic 45.0%
ATCCTGGAGAGCCAAAAGAA+GGG + chr5.1:64834237-64834256 None:intergenic 45.0%
ATGCATGCACCATGATTCCA+GGG - chr5.1:64836885-64836904 MS.gene29650:CDS 45.0%
CAAACATTGCCCTGGAATCA+TGG + chr5.1:64836897-64836916 None:intergenic 45.0%
CAAAGGTCATAGCAGGGTAT+AGG + chr5.1:64836415-64836434 None:intergenic 45.0%
CAACAAAAAACGTGGCATGG+AGG + chr5.1:64834506-64834525 None:intergenic 45.0%
CACTTCTCAACCGATGATTG+GGG - chr5.1:64836860-64836879 MS.gene29650:CDS 45.0%
CATTTGCCCACATTGCTACA+GGG - chr5.1:64835586-64835605 MS.gene29650:intron 45.0%
CCAACCCACTAAGTGTGATA+AGG + chr5.1:64834649-64834668 None:intergenic 45.0%
CCACTTCTCAACCGATGATT+GGG - chr5.1:64836859-64836878 MS.gene29650:CDS 45.0%
GATGTTTGCCTCTTCCTGAT+TGG - chr5.1:64836821-64836840 MS.gene29650:CDS 45.0%
GCTACAGGGTTAAGAAGGAT+AGG - chr5.1:64835600-64835619 MS.gene29650:intron 45.0%
TACTTAAACCTGCAAGAGGG+AGG + chr5.1:64832940-64832959 None:intergenic 45.0%
TGCATGAATCTGTCACATGG+AGG - chr5.1:64835235-64835254 MS.gene29650:intron 45.0%
TTGGTTCAGGCCAATCTTGT+GGG + chr5.1:64832465-64832484 None:intergenic 45.0%
! AGCCTCAGAGATTTGCTTGA+AGG + chr5.1:64832659-64832678 None:intergenic 45.0%
! ATTGATGGACGGTCACTAAG+GGG + chr5.1:64832550-64832569 None:intergenic 45.0%
! ATTGGTTCAGGCCAATCTTG+TGG + chr5.1:64832466-64832485 None:intergenic 45.0%
! CAATCATCGGTTGAGAAGTG+GGG + chr5.1:64836860-64836879 None:intergenic 45.0%
! CCAATCATCGGTTGAGAAGT+GGG + chr5.1:64836861-64836880 None:intergenic 45.0%
! CCTTATCACACTTAGTGGGT+TGG - chr5.1:64834646-64834665 MS.gene29650:intron 45.0%
! GAAGGGTATGGTAGTAGACT+TGG - chr5.1:64832820-64832839 MS.gene29650:intron 45.0%
! TCTGAGGCTTGTAAAGAGTG+GGG - chr5.1:64832670-64832689 MS.gene29650:intron 45.0%
! TTCCCAAGAGTCCCTTCTTT+TGG - chr5.1:64834223-64834242 MS.gene29650:CDS 45.0%
!! CTCTGAGGCTTGTAAAGAGT+GGG - chr5.1:64832669-64832688 MS.gene29650:intron 45.0%
!! TCTCTGAGGCTTGTAAAGAG+TGG - chr5.1:64832668-64832687 MS.gene29650:intron 45.0%
!!! GCTAAGGGTTGGTTCTCTTT+TGG + chr5.1:64834115-64834134 None:intergenic 45.0%
!!! TGAATTTATTATTATTTTTT+TGG - chr5.1:64833167-64833186 MS.gene29650:intron 5.0%
CAACTCTGGCTGTGGACATT+TGG + chr5.1:64834996-64835015 None:intergenic 50.0%
CAGCATGCACACACACAAAG+TGG - chr5.1:64835558-64835577 MS.gene29650:intron 50.0%
CCCACTTCTCAACCGATGAT+TGG - chr5.1:64836858-64836877 MS.gene29650:CDS 50.0%
GAGCCAAAAGAAGGGACTCT+TGG + chr5.1:64834229-64834248 None:intergenic 50.0%
GAGGCGACACATGATGAAGT+TGG - chr5.1:64835254-64835273 MS.gene29650:intron 50.0%
GATGCATGCACCATGATTCC+AGG - chr5.1:64836884-64836903 MS.gene29650:CDS 50.0%
GCATGCATCACCCCAATCAT+CGG + chr5.1:64836873-64836892 None:intergenic 50.0%
GGGTATAGGGCAGGTTTATC+TGG + chr5.1:64836401-64836420 None:intergenic 50.0%
TCATCACACTCAGATCCAGG+TGG - chr5.1:64835028-64835047 MS.gene29650:intron 50.0%
! CCCAATCATCGGTTGAGAAG+TGG + chr5.1:64836862-64836881 None:intergenic 50.0%
! GGCACGATTTGGAGAAATCG+TGG + chr5.1:64834560-64834579 None:intergenic 50.0%
!! GGTTGGTTCTCTTTTGGGAG+TGG + chr5.1:64834109-64834128 None:intergenic 50.0%
CCAAGAGTCAACTCTGGCTG+TGG + chr5.1:64835004-64835023 None:intergenic 55.0%
GGGCCGACAATGACCTACTA+TGG - chr5.1:64833889-64833908 MS.gene29650:intron 55.0%
GTCATAGCAGGGTATAGGGC+AGG + chr5.1:64836410-64836429 None:intergenic 55.0%
! CCACAGCCAGAGTTGACTCT+TGG - chr5.1:64835001-64835020 MS.gene29650:intron 55.0%
!!! GTCCCTTCTTTTGGCTCTCC+AGG - chr5.1:64834232-64834251 MS.gene29650:CDS 55.0%
CTGCAAGAGGGAGGCAGAGA+AGG + chr5.1:64832931-64832950 None:intergenic 60.0%
CTTCTCTGCCTCCCTCTTGC+AGG - chr5.1:64832929-64832948 MS.gene29650:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 64832454 64836919 64832454 ID=MS.gene29650
chr5.1 mRNA 64832454 64836919 64832454 ID=MS.gene29650.t1;Parent=MS.gene29650
chr5.1 exon 64836423 64836919 64836423 ID=MS.gene29650.t1.exon1;Parent=MS.gene29650.t1
chr5.1 CDS 64836423 64836919 64836423 ID=cds.MS.gene29650.t1;Parent=MS.gene29650.t1
chr5.1 exon 64834202 64834532 64834202 ID=MS.gene29650.t1.exon2;Parent=MS.gene29650.t1
chr5.1 CDS 64834202 64834532 64834202 ID=cds.MS.gene29650.t1;Parent=MS.gene29650.t1
chr5.1 exon 64832889 64833110 64832889 ID=MS.gene29650.t1.exon3;Parent=MS.gene29650.t1
chr5.1 CDS 64832889 64833110 64832889 ID=cds.MS.gene29650.t1;Parent=MS.gene29650.t1
chr5.1 exon 64832454 64832636 64832454 ID=MS.gene29650.t1.exon4;Parent=MS.gene29650.t1
chr5.1 CDS 64832454 64832636 64832454 ID=cds.MS.gene29650.t1;Parent=MS.gene29650.t1
Gene Sequence

>MS.gene29650

ATGATCAGCCCACAAGATTGGCCTGAACCAATAATCCCAGTTCAATCTTTATCCGAAAGTTGCATAGATTCAATCCCTCAAAGATATATCAAACCCCTTAGTGACCGTCCATCAATAAACTCTATTTTAGAAACAACCAATAATATCCCAATAATTGACCTTAGAGGTTTATATAGTACTAACCCACATGAACAAGCTTCAACCTTCAAGCAAATCTCTGAGGCTTGTAAAGAGTGGGGATTCTTTCAAATTGTTAACCATGGTGTTAGCCATGATTTGATGGATTTAGCTAAGGAAACTTGGCGTCAATTTTTTCACTTGCCTATGGAAGTGAAACAATTATATGCAAACTCACCAAAAACTTATGAAGGGTATGGTAGTAGACTTGGTGTTAAGAAAGGTGCTATTCTTGATTGGAGTGATTACTATTATCTTCATTATCTTCCTTTGTCTTTGAAGGACTACAACAAATGGCCTTCTCTGCCTCCCTCTTGCAGGTTTAAGTACTTATATTACTACTAGAAAAATAAAATTAGCAAAGAAAATTAGTTATGGAAAAAATTAAATACATCTCTAATTTCATCGTCACAAATTCAATGACGGAATTAAAAAGAGATTTTACGTGTTCTCTCTATATAAATATTCTTTATTAGTTATGTTTTTTTAGTATATATGAAAATAACAATCAACAATAGAAATTTGATCATCATGCATGAATTTATTATTATTTTTTTGGTCGAAATGCATAAATTTATTATGGATCATTTCGATATACATGGGTGATGTGCTAGGCTTGTATCCTCTACTATTTTTGTAGCTTGTTCATTAAGAGGTAGGTAGTTGGATTCATACAGCTACTTATCTAAACAAGCTGCAGATCGAGCTAAGAGATGATCAAGTTAATTAGTGTAAAACTATTTGAATTGTGTACATACAACGGGTTATGATCCGCCCTATTTGACAAAATAGATGAAGTATACAATTTGGAGAGACATAAACATAAAAAATAGATAGTTAATTCTACTTCTTTCAAAAAAAAAAGAAAAAGATAGTGAATTCTATTATTAAGTGAGTCTAATCATCATTAATTATTTTAAAATATGTTGTGTTTTATCTCTCCAAATTGAACAAATGAAGAGATCATAAATAGAGACGAGCTTAACTCACATACATAAACATGAAAATATGAAACATTTTTAATTTCGTCGTAAAGTTAATAAAAAGAAAAATTAATTTTATTATTTTCATTTCTAATTTCTGACATGATTTAACAAATTAATTATAATGAGTTTTGTGCTATTTATATCAATAACAACAGATCTAAATCTAATCTAGCATTTAAATGTAAAGTAAAACCTCACAATCGAATCAAAGAATAAACAAGATGAAGAGAGTAGAGAAAAGAGAACAACACCAAAAAATGTTTAGTCAGTTTGGGCCGACAATGACCTACTATGGAAAAGAGATCTCTCCGCTTTACCATCAATGAATTCTTTACAAAGATATACAAAAGAGTTACAAGAAATTAGTTTTAGTGAGCTCTCCAAGAACAAACCTAATTTCTACCTATTTCTCAATCTCTTCCCCTTAACAAAAGACTCAATGATTTCACTCAGTCAAGGTGTTTCCCAATTGTTTCTCAACTCTAGAATCCACTCCCAAAAGAGAACCAACCCTTAGCCTTTAATTTTCTAAGGATCTTCTCTTTTGGTCTCTCAAGACTCACTCAAGTTGATCACAAAGACTCTCCTTTAAAAGGCACCAACTTTTTCCCAAGAGTCCCTTCTTTTGGCTCTCCAGGATTCACATCTTGAAGTTTTGAACTTCACCCAAAGACCCTCAACCTTTTGTATCTAAATACCCTAAAAATTCCCTCCTTTGATTTTCATGAGATTCATTGAGCTTACTCAACAAATTAGTCAAGGAATGTTTAAATAATATTTCAGATCCTGTCAAATCGTGCCACGATTTGTTCCAATCATGCAACAATTTCATGTTATTATACAATACAATACTCAACATTATACAAAGTCGTGCAATGATTTCTTCCCTCCATGCCACGTTTTTTGTTGAAACAAACCCGATTTATGAACCAAAATCATGCCACGATTTCTCCAAATCGTGCCACGTTTTTGCTAAAATACAAACATCAAATTTTGAGTCAAAACTCAACATATACAACACTCATCAAACCTTATCACACTTAGTGGGTTGGCGATATGAATCAAATACTTTATAATATTCTATCATAAATCATATTTTTATCCAACTCTTTAATCTCTAAATTTTATGAATAGTTTCTCTTATATAAATATGTTAACTTTGTGTCTATTGAATTGTCATTTTGTGGGTAACATTAATACTTAAGGATACAAATTTGAATGTAGGGAGGTGTTTGATGAATATGGGATAGAATTGGTGAAGTTATGTGAGAGGTTGATGAAAGTTCTATCTATAAACCTTGGATTGGAAGAGAATTTTCTTCAAAATGCTTTTGGAGGTGAAGATATTGGTGCTTGCATAAGGGTGAATTATTTTCCCAAATGTCCACAGCCAGAGTTGACTCTTGGTTTATCATCACACTCAGATCCAGGTGGCATTACTCTTTTGTTACCAGATGATCAAGTACATGGTCTTCAAGTTCGTAAAGGTGATAATTGGATTACGGTGAAACCTGTTCGTAATGCATTTATTGTCAATATTGGTGATCAAATTCAGGTGAATTATAATTCTTATAATATTCTTATTGATAATGTTTGGCTAGAAAATTTTCATTCATGATGCATGAATCTGTCACATGGAGGCGACACATGATGAAGTTGGTGCGTTTTTTTGTTAATAAATAATGTTTATTTATTTTTGTTATTCGTCAGATTTTTTGGATGGTTGTGGCCTTTTGAAAGATACATCTCATTCTTTGTTTTATTTTATTTAAGTTTGTTACTATAAGTGACATGAGAACAGTTCAAAACATAGTATTACGATTTTAAATGGGCTTGATATATTGACGTATAAATATTAATATAGACATGTCAAATAGTTTAATTGAAAATTTGAAAGAAACGTTTTATCTTAAATAATGTTCTTTTTCACTATTGCATAATCAGCATGCACACACACAAAGTGGATAAACATTTGCCCACATTGCTACAGGGTTAAGAAGGATAGGGTCGTTAATTTATTCATGATATGTCGTTAATTATATACTTTATCTCCATCGTGCTTTTACCTTCCTAAGTTAATTTGTGACTGTAAAGTTGTCCTCTACCAATCACAACTTATCCTATGTATGTTGACCAATAATTGAAAGCAAGATACTTCAACTAAAAGAGTACAGTTTAGAATATTAAGTGAATCTATGTAAAACTACACTAAGATTGATTAAATTCTTATTTGAAATAACAAAAAAAAAAAAATCATGCAAAAGTATTGCAATGGAAGAAGTCATTTCAACGAAGTGTATGTTTAGTATTACGATGGATGTGACAGAATCACGACAACCCAACTATGAATTTCTAAACGCTACAAAAAGTCATTTCAACTATCGCATCTTCTAACAATCAAATGTAATTAAGAACCCACAAATGACTAAATTTTCATCGTATATTATGTAGAAATAAAATAACTTAGCAAATAAACACCTAAGAATTGCATCTAGGGTAGTATTATTTCTGTCATTGATGATACTTGAGAGGCAAAAATGATCCAAGATTTTGCCTTCCATATAATTGTATGAATGATTTGTTATTATTTCTTATTAATTATATCGTTAATATATTACTAAATTTGTTTATTTTGTGTTTGATAAGGTTCTAAGCAATGCAATCTACAGGAGTGTAGAGCATAGAGTACTAGCAAACTCACACAAAGAAAGAGTTTCCTTAGCTTTCTTCTACAATCCCAAAAGTGACATTCCAATAGAGCCAGCAAAAGAATTGGTAAAGCCAGATAAACCTGCCCTATACCCTGCTATGACCTTTGATGAATATAGGCTTTTCATTAGAATGAGGGGTCCATGTGGAAAATCTCAAGTAGAATCTTTAAAATCTCCGAGATGATATGCATGTTTGGATCAACGGTAAGTCTATGAAAGCATGATGACATCTGCACCGTTTGTTTCTGTGTCAATGAAGTTTCAAAAGATAGTTTTTGCTGAAATCGTGATGACCTACTATGATTCTGTAAAACTCGTTGTGATCCTTAACATTTAATCACAAGCCGTGTATATAACCTCCTTCTAGCTAGTTGATATTATTAGATAATCTTAAATTGTTGTTAGATAGGTACTTGTTAATTTTGTACAAATTGCACATCAATTAAGCCAGAAAGTGAGGGTACAAAGATTGCATGTGAAATTGATGGAAAATGATGTTTGCCTCTTCCTGATTGGTAATTTGGGTAGTCCCCACTTCTCAACCGATGATTGGGGTGATGCATGCACCATGATTCCAGGGCAATGTTTGTAA
Protein sequence

>MS.gene29650.t1

MISPQDWPEPIIPVQSLSESCIDSIPQRYIKPLSDRPSINSILETTNNIPIIDLRGLYSTNPHEQASTFKQISEACKEWGFFQIVNHGVSHDLMDLAKETWRQFFHLPMEVKQLYANSPKTYEGYGSRLGVKKGAILDWSDYYYLHYLPLSLKDYNKWPSLPPSCREVFDEYGIELVKLCERLMKVLSINLGLEENFLQNAFGGEDIGACIRVNYFPKCPQPELTLGLSSHSDPGGITLLLPDDQVHGLQVRKGDNWITVKPVRNAFIVNIGDQIQVLSNAIYRSVEHRVLANSHKERVSLAFFYNPKSDIPIEPAKELVKPDKPALYPAMTFDEYRLFIRMRGPCGKSQVLVNFVQIAHQLSQKVRVQRLHVKLMENDVCLFLIGNLGSPHFSTDDWGDACTMIPGQCL