Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30874.t1 | XP_013468288.1 | 94.3 | 928 | 32 | 2 | 1 | 910 | 1 | 925 | 0.00E+00 | 1572 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30874.t1 | Q9SF47 | 50.1 | 962 | 370 | 17 | 1 | 910 | 1 | 904 | 4.7e-235 | 815.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30874.t1 | A0A072VW73 | 94.3 | 928 | 32 | 2 | 1 | 910 | 1 | 925 | 0.0e+00 | 1572.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30874 | MS.gene48495 | PPI |
| MS.gene30874 | MS.gene054635 | PPI |
| MS.gene38722 | MS.gene30874 | PPI |
| MS.gene012989 | MS.gene30874 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30874.t1 | MTR_1g067380 | 93.858 | 928 | 36 | 2 | 1 | 910 | 1 | 925 | 0.0 | 1784 |
| MS.gene30874.t1 | MTR_7g100370 | 61.283 | 935 | 269 | 19 | 1 | 910 | 1 | 867 | 0.0 | 1055 |
| MS.gene30874.t1 | MTR_3g101590 | 66.667 | 306 | 100 | 1 | 602 | 905 | 522 | 827 | 5.38e-141 | 440 |
| MS.gene30874.t1 | MTR_3g101590 | 58.268 | 127 | 43 | 1 | 1 | 117 | 1 | 127 | 4.43e-40 | 160 |
| MS.gene30874.t1 | MTR_1g019740 | 76.230 | 244 | 57 | 1 | 663 | 905 | 132 | 375 | 1.05e-134 | 408 |
| MS.gene30874.t1 | MTR_1g019740 | 76.230 | 244 | 57 | 1 | 663 | 905 | 272 | 515 | 1.05e-132 | 408 |
| MS.gene30874.t1 | MTR_1g019740 | 60.440 | 91 | 33 | 2 | 1 | 88 | 1 | 91 | 9.43e-27 | 115 |
| MS.gene30874.t1 | MTR_3g101590 | 65.596 | 218 | 73 | 1 | 602 | 817 | 522 | 739 | 1.08e-88 | 299 |
| MS.gene30874.t1 | MTR_3g101590 | 58.268 | 127 | 43 | 1 | 1 | 117 | 1 | 127 | 2.32e-40 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30874.t1 | AT3G09560 | 71.531 | 418 | 97 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene30874.t1 | AT3G09560 | 71.531 | 418 | 97 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene30874.t1 | AT3G09560 | 71.531 | 418 | 97 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene30874.t1 | AT3G09560 | 71.531 | 418 | 97 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene30874.t1 | AT5G42870 | 54.818 | 467 | 188 | 8 | 452 | 909 | 477 | 929 | 8.34e-166 | 508 |
| MS.gene30874.t1 | AT5G42870 | 61.458 | 96 | 37 | 0 | 1 | 96 | 1 | 96 | 5.09e-34 | 141 |
| MS.gene30874.t1 | AT5G42870 | 53.961 | 467 | 187 | 9 | 452 | 909 | 477 | 924 | 3.50e-160 | 493 |
| MS.gene30874.t1 | AT5G42870 | 51.538 | 130 | 58 | 1 | 1 | 130 | 1 | 125 | 5.22e-34 | 141 |
| MS.gene30874.t1 | AT5G42870 | 54.306 | 418 | 168 | 8 | 452 | 860 | 477 | 880 | 4.12e-140 | 439 |
| MS.gene30874.t1 | AT5G42870 | 51.538 | 130 | 58 | 1 | 1 | 130 | 1 | 125 | 4.54e-34 | 141 |
Find 216 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATTTCAATACCTGTTTC+AGG | 0.195193 | 1.2:-50671266 | None:intergenic |
| GATCATAGTATTTCGGATTC+TGG | 0.200059 | 1.2:+50668543 | MS.gene30874:CDS |
| ATTCTGAAGTTGGAGATTTA+TGG | 0.208971 | 1.2:-50669436 | None:intergenic |
| CATGTTTCCACCAACTTCTT+TGG | 0.239861 | 1.2:+50672681 | MS.gene30874:CDS |
| CATATGTATCTTGATAATTC+CGG | 0.245852 | 1.2:+50668417 | MS.gene30874:CDS |
| TTGGATTAATGTCAGGAAAA+TGG | 0.251410 | 1.2:+50671174 | MS.gene30874:intron |
| ACTACAACTCATGGAATTAT+TGG | 0.260148 | 1.2:+50672808 | MS.gene30874:CDS |
| AGTATCGGTGTCGCATTGTC+TGG | 0.267399 | 1.2:-50668964 | None:intergenic |
| AATCCATTCTATGCGGGATT+TGG | 0.279917 | 1.2:+50672428 | MS.gene30874:CDS |
| GAAGTACCCCTTGGTATGTT+AGG | 0.283434 | 1.2:+50668316 | MS.gene30874:CDS |
| AGAATCAAAATCTTGTTATC+AGG | 0.284268 | 1.2:+50669940 | MS.gene30874:CDS |
| AAATTTCAAGGTGTTCTTAA+AGG | 0.290532 | 1.2:+50668345 | MS.gene30874:CDS |
| GTTGTTAGAATAAGTGTTAA+TGG | 0.298990 | 1.2:+50668378 | MS.gene30874:CDS |
| AAGGAGGCGGATGAGGATAA+AGG | 0.302738 | 1.2:+50668456 | MS.gene30874:CDS |
| TAGACTTGATCATAGTATTT+CGG | 0.316398 | 1.2:+50668536 | MS.gene30874:CDS |
| AAAGGTGACCAAGTCCATTC+TGG | 0.327513 | 1.2:+50669677 | MS.gene30874:CDS |
| ATCATAGTATTTCGGATTCT+GGG | 0.332106 | 1.2:+50668544 | MS.gene30874:CDS |
| TGCCTTTAGTTGGCAAAGAT+TGG | 0.332891 | 1.2:+50670762 | MS.gene30874:CDS |
| AATTCATACGGGACTTTAGA+TGG | 0.334398 | 1.2:+50668687 | MS.gene30874:CDS |
| GTTCTAGGAATGGCTGCATT+TGG | 0.343203 | 1.2:+50670005 | MS.gene30874:CDS |
| TCCACAGGAATTGCATCTTT+CGG | 0.348332 | 1.2:-50670047 | None:intergenic |
| GACCAAGTCCATTCTGGTTT+GGG | 0.351548 | 1.2:+50669683 | MS.gene30874:CDS |
| TTTGATGATTTATCGGAATA+CGG | 0.351594 | 1.2:+50668660 | MS.gene30874:CDS |
| TTGATGCTCATATATACTTA+TGG | 0.355928 | 1.2:+50670479 | MS.gene30874:CDS |
| ATGAATGTAGTTGGGAAAGT+TGG | 0.356341 | 1.2:+50668192 | MS.gene30874:CDS |
| GAACTTAGTTACAGAAAGAT+TGG | 0.358190 | 1.2:+50672467 | MS.gene30874:CDS |
| TTGACCATCTTTAAGATTCA+AGG | 0.360096 | 1.2:-50670309 | None:intergenic |
| GTATTTCTAGATTCCGAGTC+TGG | 0.360338 | 1.2:+50670191 | MS.gene30874:CDS |
| TCAAAAGTGCCTCACCTTCT+CGG | 0.362301 | 1.2:-50671412 | None:intergenic |
| ATATGTATCTTGATAATTCC+GGG | 0.366297 | 1.2:+50668418 | MS.gene30874:CDS |
| CAGGTTAAGTAGGAAGTTCC+TGG | 0.368225 | 1.2:-50671247 | None:intergenic |
| ACAAATAGTCCTGCTTCTTC+TGG | 0.368912 | 1.2:+50669410 | MS.gene30874:CDS |
| AAGGCTGCTCCTCTTGTTCT+AGG | 0.373703 | 1.2:+50669990 | MS.gene30874:CDS |
| CAAGGATGCTATCTGTTCAT+TGG | 0.383147 | 1.2:-50670291 | None:intergenic |
| GAAATAACAACAGGTCCATT+AGG | 0.385877 | 1.2:-50671362 | None:intergenic |
| TTGACCCTTCGAAAAGGATT+AGG | 0.387862 | 1.2:-50670128 | None:intergenic |
| TGACCAAGTCCATTCTGGTT+TGG | 0.391464 | 1.2:+50669682 | MS.gene30874:CDS |
| ATGGGTTTGGTAGCTGCTGC+TGG | 0.398274 | 1.2:+50669855 | MS.gene30874:CDS |
| GGCAATGGAGAGTTTAGTTC+CGG | 0.400673 | 1.2:+50668879 | MS.gene30874:CDS |
| ACCCCTTGGTATGTTAGGTT+TGG | 0.403585 | 1.2:+50668321 | MS.gene30874:CDS |
| TGAAGTCCTGATTCTGAAGT+TGG | 0.404508 | 1.2:-50669446 | None:intergenic |
| ACACTCACCAAGACCATCTC+TGG | 0.405325 | 1.2:-50668741 | None:intergenic |
| GTTAGGTTTGGTAAATTTCA+AGG | 0.406463 | 1.2:+50668333 | MS.gene30874:CDS |
| ATTGCATCTTTCGGCTCAAC+AGG | 0.408265 | 1.2:-50670038 | None:intergenic |
| AAATCTCCAACTTCAGAATC+AGG | 0.408685 | 1.2:+50669440 | MS.gene30874:CDS |
| TTCTGCTCTGATTCCGAGAT+AGG | 0.409037 | 1.2:-50668786 | None:intergenic |
| ATCTAGAAATACATCTTCAT+TGG | 0.414020 | 1.2:-50670180 | None:intergenic |
| AGTTTGTTTGTTATTCTGTT+CGG | 0.414097 | 1.2:-50669540 | None:intergenic |
| CAATTCCTGTGGAATATTCC+AGG | 0.414250 | 1.2:+50670057 | MS.gene30874:CDS |
| ATAAATCATCAAAAGAATCT+TGG | 0.418398 | 1.2:-50668650 | None:intergenic |
| CTTCTCGAATTTCGACCTCC+AGG | 0.419917 | 1.2:-50669067 | None:intergenic |
| CGCTGATTATATTAGCAAGC+TGG | 0.421106 | 1.2:+50668917 | MS.gene30874:CDS |
| CCTCTGTGGTCATGAACTTA+AGG | 0.422266 | 1.2:+50669827 | MS.gene30874:CDS |
| AGGAGGCGGATGAGGATAAA+GGG | 0.423802 | 1.2:+50668457 | MS.gene30874:CDS |
| TGGTTATGGTTGTACCGCTT+TGG | 0.424119 | 1.2:+50668989 | MS.gene30874:CDS |
| TTTCGGATTCTGGGGTGCTT+CGG | 0.425911 | 1.2:+50668553 | MS.gene30874:CDS |
| GGCAAAGATTGGACACAATC+TGG | 0.426891 | 1.2:+50670773 | MS.gene30874:CDS |
| GCACCACCAAATGGATGAAA+AGG | 0.426945 | 1.2:-50668252 | None:intergenic |
| CTTCCTACTTAACCTGAAAC+AGG | 0.429313 | 1.2:+50671254 | MS.gene30874:CDS |
| TAGTTCCGGCGAAACTGCTT+GGG | 0.432847 | 1.2:+50668893 | MS.gene30874:CDS |
| TGAATGTAGTTGGGAAAGTT+GGG | 0.435349 | 1.2:+50668193 | MS.gene30874:CDS |
| CCTATAAATTAGTCGACATC+TGG | 0.437927 | 1.2:-50672843 | None:intergenic |
| GTCCAATCTTTGCCAACTAA+AGG | 0.443917 | 1.2:-50670764 | None:intergenic |
| CTTCTTGACAAACTTTGAGT+GGG | 0.446006 | 1.2:-50669013 | None:intergenic |
| TTGCCAAATCCCGCATAGAA+TGG | 0.455784 | 1.2:-50672431 | None:intergenic |
| TTAGTTCCGGCGAAACTGCT+TGG | 0.456179 | 1.2:+50668892 | MS.gene30874:CDS |
| CTGGACGCAGATGGAGACTT+TGG | 0.458111 | 1.2:+50670105 | MS.gene30874:CDS |
| TGTTCGGTATAATCAGCAAT+AGG | 0.461473 | 1.2:-50669524 | None:intergenic |
| ATGGTCTTGGTGAGTGTTGA+TGG | 0.461897 | 1.2:+50668747 | MS.gene30874:CDS |
| CTCATATATACTTATGGAAG+TGG | 0.463033 | 1.2:+50670485 | MS.gene30874:CDS |
| TCATGAACTTAAGGCAGGTA+TGG | 0.463748 | 1.2:+50669836 | MS.gene30874:CDS |
| GGACAGTTCATGCCTTTAGT+TGG | 0.463774 | 1.2:+50670752 | MS.gene30874:CDS |
| ACCAACTTCTTTGGTCGAGC+AGG | 0.464848 | 1.2:+50672690 | MS.gene30874:CDS |
| CTTATTATCTTCAACTGAAG+TGG | 0.473559 | 1.2:-50669606 | None:intergenic |
| GATGCTATCTGTTCATTGGT+TGG | 0.473752 | 1.2:-50670287 | None:intergenic |
| TTGATGATTTATCGGAATAC+GGG | 0.474307 | 1.2:+50668661 | MS.gene30874:CDS |
| ATGAAGAGGATTCGTCGGTT+GGG | 0.475265 | 1.2:+50668583 | MS.gene30874:CDS |
| TCCTCAATTTCATCTAGGTC+CGG | 0.478482 | 1.2:+50668833 | MS.gene30874:CDS |
| TCTTCTTGACAAACTTTGAG+TGG | 0.479754 | 1.2:-50669014 | None:intergenic |
| ACTTAAGGCAGGTATGGGTT+TGG | 0.479885 | 1.2:+50669842 | MS.gene30874:CDS |
| GATGTACTTGACGTGGGAAA+AGG | 0.482711 | 1.2:+50669971 | MS.gene30874:CDS |
| AGGATTCGTCGGTTGGGCCT+CGG | 0.484270 | 1.2:+50668589 | MS.gene30874:CDS |
| TGAGTACTCGATGTTGGAGT+TGG | 0.484391 | 1.2:-50670227 | None:intergenic |
| CAATGCGACACCGATACTAA+TGG | 0.484513 | 1.2:+50668969 | MS.gene30874:CDS |
| GAGGTTGAGAAGGATTCATC+AGG | 0.484529 | 1.2:+50669476 | MS.gene30874:CDS |
| GTTTGAAGCCCATCGAATAT+CGG | 0.487032 | 1.2:+50669881 | MS.gene30874:CDS |
| TATATTGACGGCTCCTATCT+CGG | 0.488621 | 1.2:+50668773 | MS.gene30874:CDS |
| CACCACCAAATGGATGAAAA+GGG | 0.491241 | 1.2:-50668251 | None:intergenic |
| TCGAGAAGATCTTTCGCAGC+AGG | 0.493532 | 1.2:+50669082 | MS.gene30874:CDS |
| CCTGTTGTTATTTCACCCGA+TGG | 0.494608 | 1.2:+50671371 | MS.gene30874:CDS |
| ATACCTGTTTCAGGTTAAGT+AGG | 0.495257 | 1.2:-50671257 | None:intergenic |
| GACACCGATACTAATGGTTA+TGG | 0.497528 | 1.2:+50668975 | MS.gene30874:CDS |
| TGCTCCTCTTGTTCTAGGAA+TGG | 0.497537 | 1.2:+50669995 | MS.gene30874:CDS |
| AGAGAATTCTGTCGACTCGC+AGG | 0.499664 | 1.2:+50668710 | MS.gene30874:CDS |
| GATTATAATCCATTCTATGC+GGG | 0.501076 | 1.2:+50672422 | MS.gene30874:CDS |
| ATCGTGATTTCAGACGTTGA+TGG | 0.501083 | 1.2:+50670517 | MS.gene30874:CDS |
| TAACCTTCAGTTTCTCTACA+AGG | 0.502045 | 1.2:+50670339 | MS.gene30874:CDS |
| AGAAGAAGCAGGACTATTTG+TGG | 0.502356 | 1.2:-50669408 | None:intergenic |
| TAATAATTCAAGTGAGGTGG+TGG | 0.502796 | 1.2:+50669631 | MS.gene30874:CDS |
| CTCCATCTGCGTCCAGGCGA+GGG | 0.503360 | 1.2:-50670098 | None:intergenic |
| ACATCAACAGCACCACCAAA+TGG | 0.504876 | 1.2:-50668261 | None:intergenic |
| GTATCGGTGTCGCATTGTCT+GGG | 0.506944 | 1.2:-50668963 | None:intergenic |
| AACAACAGGTCCATTAGGTA+AGG | 0.509268 | 1.2:-50671357 | None:intergenic |
| ATTGTCTTGACCCTTCGAAA+AGG | 0.509842 | 1.2:-50670134 | None:intergenic |
| AATCCTCTGCCGATATTCGA+TGG | 0.510384 | 1.2:-50669890 | None:intergenic |
| ATAATCAGCAATAGGAGAGC+AGG | 0.512498 | 1.2:-50669516 | None:intergenic |
| GATGAAGAGGATTCGTCGGT+TGG | 0.513362 | 1.2:+50668582 | MS.gene30874:CDS |
| AGAAATCCTCAATTTCATCT+AGG | 0.514893 | 1.2:+50668828 | MS.gene30874:CDS |
| CAAAGTCTCCATCTGCGTCC+AGG | 0.514955 | 1.2:-50670104 | None:intergenic |
| GAAGATCTTTCGCAGCAGGC+TGG | 0.518383 | 1.2:+50669086 | MS.gene30874:CDS |
| AGTGAAGGAAATAATCCATC+GGG | 0.522392 | 1.2:-50671386 | None:intergenic |
| TTACTTGAAGTTTCAGCTTG+AGG | 0.522841 | 1.2:-50669656 | None:intergenic |
| GATCAACAATCACCCTCGCC+TGG | 0.524657 | 1.2:+50670086 | MS.gene30874:CDS |
| CATTCTGGTTTGGGTAAGCC+CGG | 0.525154 | 1.2:+50669692 | MS.gene30874:CDS |
| TTCTCGAATTTCGACCTCCA+GGG | 0.525306 | 1.2:-50669066 | None:intergenic |
| AAGAGATGCTAGTTCGTCAC+TGG | 0.525309 | 1.2:+50669121 | MS.gene30874:CDS |
| CATATGTCGGTCTCCTCAGC+CGG | 0.526383 | 1.2:-50668852 | None:intergenic |
| CCATCGGGTGAAATAACAAC+AGG | 0.526401 | 1.2:-50671371 | None:intergenic |
| CACCCTCGCCTGGACGCAGA+TGG | 0.526617 | 1.2:+50670096 | MS.gene30874:CDS |
| CAAGCTGAAACTTCAAGTAA+AGG | 0.526923 | 1.2:+50669659 | MS.gene30874:CDS |
| AGTTCCTGGTCAAATATGCC+TGG | 0.527570 | 1.2:-50671233 | None:intergenic |
| TAGAATGGATTATAATCAGA+AGG | 0.530145 | 1.2:-50672416 | None:intergenic |
| CATGAACTTAAGGCAGGTAT+GGG | 0.531651 | 1.2:+50669837 | MS.gene30874:CDS |
| GCTGATTATATTAGCAAGCT+GGG | 0.534908 | 1.2:+50668918 | MS.gene30874:CDS |
| TGCAGGAAGACTACAACTCA+TGG | 0.536596 | 1.2:+50672799 | MS.gene30874:intron |
| CGGTTGGGCCTCGGATTCAA+AGG | 0.540380 | 1.2:+50668598 | MS.gene30874:CDS |
| ACCTGCTCGACCAAAGAAGT+TGG | 0.540794 | 1.2:-50672691 | None:intergenic |
| ATTCAAAGGACGGAATCTGA+TGG | 0.541125 | 1.2:+50668612 | MS.gene30874:CDS |
| TCAAGATCAAGAGGTTGAGA+AGG | 0.541589 | 1.2:+50669466 | MS.gene30874:CDS |
| TCTCCATCTGCGTCCAGGCG+AGG | 0.542422 | 1.2:-50670099 | None:intergenic |
| TCCATTGCCTTCGCATATGT+CGG | 0.543783 | 1.2:-50668865 | None:intergenic |
| TCACCAAGACCATCTCTGGA+TGG | 0.544155 | 1.2:-50668737 | None:intergenic |
| TTCCCATCCAGAGATGGTCT+TGG | 0.548499 | 1.2:+50668734 | MS.gene30874:CDS |
| AACTCCAACATCGAGTACTC+AGG | 0.548772 | 1.2:+50670229 | MS.gene30874:CDS |
| TACCCAAACCAGAATGGACT+TGG | 0.549780 | 1.2:-50669685 | None:intergenic |
| TGATTGTTGATCACCATCCC+TGG | 0.549997 | 1.2:-50670075 | None:intergenic |
| GTTGGGAGTTTGATAAGTCA+AGG | 0.551287 | 1.2:+50668210 | MS.gene30874:CDS |
| CGGGCTTACCCAAACCAGAA+TGG | 0.552159 | 1.2:-50669691 | None:intergenic |
| AGAAAGATTGGAATCCCAAA+GGG | 0.552573 | 1.2:+50672479 | MS.gene30874:CDS |
| GTGGCTATTAGTCAACGTAT+TGG | 0.556400 | 1.2:+50672619 | MS.gene30874:CDS |
| TGCTCGACCAAAGAAGTTGG+TGG | 0.556711 | 1.2:-50672688 | None:intergenic |
| AGCGGCCCAAGCAGTTTCGC+CGG | 0.560082 | 1.2:-50668898 | None:intergenic |
| AACCTTCAGTTTCTCTACAA+GGG | 0.560610 | 1.2:+50670340 | MS.gene30874:CDS |
| CTTCACAAAATAAGCCTCCC+CGG | 0.566704 | 1.2:-50668436 | None:intergenic |
| GAGTGCGCGTGCAATTGTCC+AGG | 0.566883 | 1.2:+50671215 | MS.gene30874:CDS |
| ACTCAAAGTTTGTCAAGAAG+AGG | 0.568849 | 1.2:+50669016 | MS.gene30874:CDS |
| CACCAAGACCATCTCTGGAT+GGG | 0.570244 | 1.2:-50668736 | None:intergenic |
| GCATCCTTGAATCTTAAAGA+TGG | 0.570712 | 1.2:+50670305 | MS.gene30874:CDS |
| TTCTAAAAGAGTTCCAGACT+CGG | 0.570867 | 1.2:-50670204 | None:intergenic |
| GCAGCCATTCCTAGAACAAG+AGG | 0.571366 | 1.2:-50669999 | None:intergenic |
| ATCCTCTGCCGATATTCGAT+GGG | 0.572162 | 1.2:-50669889 | None:intergenic |
| GATCCCTGAGTACTCGATGT+TGG | 0.572537 | 1.2:-50670233 | None:intergenic |
| TTCAAAGGACGGAATCTGAT+GGG | 0.573920 | 1.2:+50668613 | MS.gene30874:CDS |
| CTCGGAATCAGAGCAGAATG+AGG | 0.574005 | 1.2:+50668791 | MS.gene30874:CDS |
| TGTGGTCATGAACTTAAGGC+AGG | 0.574969 | 1.2:+50669831 | MS.gene30874:CDS |
| TTGTCCAGGCATATTTGACC+AGG | 0.577217 | 1.2:+50671229 | MS.gene30874:CDS |
| ACCGACATATGCGAAGGCAA+TGG | 0.577830 | 1.2:+50668864 | MS.gene30874:CDS |
| GCCGGACCTAGATGAAATTG+AGG | 0.581165 | 1.2:-50668834 | None:intergenic |
| CCATCCCTGGAATATTCCAC+AGG | 0.583110 | 1.2:-50670062 | None:intergenic |
| GATTCCGTCCTTTGAATCCG+AGG | 0.583634 | 1.2:-50668606 | None:intergenic |
| GCGCACTCAGAAACAATAGT+TGG | 0.583699 | 1.2:-50671200 | None:intergenic |
| GAATACGGGTCTAATTCATA+CGG | 0.586339 | 1.2:+50668675 | MS.gene30874:CDS |
| AAGTGAAGGAAATAATCCAT+CGG | 0.586577 | 1.2:-50671387 | None:intergenic |
| GTTCAAAATTGCTTGTCTAG+AGG | 0.588437 | 1.2:+50672276 | MS.gene30874:CDS |
| TACCAAACCTAACATACCAA+GGG | 0.590463 | 1.2:-50668323 | None:intergenic |
| GAGAATTCTGTCGACTCGCA+GGG | 0.591012 | 1.2:+50668711 | MS.gene30874:CDS |
| TTCTTGACAAACTTTGAGTG+GGG | 0.591743 | 1.2:-50669012 | None:intergenic |
| GGAGGCGGATGAGGATAAAG+GGG | 0.593652 | 1.2:+50668458 | MS.gene30874:CDS |
| AATAGTCCTGCTTCTTCTGG+TGG | 0.594001 | 1.2:+50669413 | MS.gene30874:CDS |
| AATATTCATCATTAACCCGA+AGG | 0.596230 | 1.2:+50672505 | MS.gene30874:CDS |
| TTATGGCCACCAGAAGAAGC+AGG | 0.598102 | 1.2:-50669419 | None:intergenic |
| TCACCTTCTCGGAAAAGTGA+AGG | 0.598769 | 1.2:-50671401 | None:intergenic |
| ATCAGGACTTCAAGATCAAG+AGG | 0.598812 | 1.2:+50669457 | MS.gene30874:CDS |
| GGACACAATCTGGTGTGGCA+AGG | 0.599007 | 1.2:+50670783 | MS.gene30874:CDS |
| GAATAATAATTCAAGTGAGG+TGG | 0.599747 | 1.2:+50669628 | MS.gene30874:CDS |
| CTTAAGTTCATGACCACAGA+GGG | 0.601364 | 1.2:-50669826 | None:intergenic |
| GAAAGATGAAGAGGATTCGT+CGG | 0.604588 | 1.2:+50668578 | MS.gene30874:CDS |
| TAAGAATAATAATTCAAGTG+AGG | 0.607755 | 1.2:+50669625 | MS.gene30874:CDS |
| GCAGGGTTCCCATCCAGAGA+TGG | 0.607859 | 1.2:+50668728 | MS.gene30874:CDS |
| TCATAGTATTTCGGATTCTG+GGG | 0.608364 | 1.2:+50668545 | MS.gene30874:CDS |
| GCTTCGGTTGAAAGATGAAG+AGG | 0.609083 | 1.2:+50668569 | MS.gene30874:CDS |
| TAAAGAGATGTACTTGACGT+GGG | 0.616671 | 1.2:+50669965 | MS.gene30874:CDS |
| GTACATTTAGAAGTACCCCT+TGG | 0.616851 | 1.2:+50668307 | MS.gene30874:CDS |
| ATTTCATCTAGGTCCGGCTG+AGG | 0.617666 | 1.2:+50668839 | MS.gene30874:CDS |
| CCTGTGGAATATTCCAGGGA+TGG | 0.618027 | 1.2:+50670062 | MS.gene30874:CDS |
| AATTCCTGTGGAATATTCCA+GGG | 0.618544 | 1.2:+50670058 | MS.gene30874:CDS |
| AGCCCATCGAATATCGGCAG+AGG | 0.618776 | 1.2:+50669887 | MS.gene30874:CDS |
| TTAAAGAGATGTACTTGACG+TGG | 0.623862 | 1.2:+50669964 | MS.gene30874:CDS |
| TTACCAAACCTAACATACCA+AGG | 0.625890 | 1.2:-50668324 | None:intergenic |
| AGAATGGATTATAATCAGAA+GGG | 0.627237 | 1.2:-50672415 | None:intergenic |
| ATTGTTGTTCAGCAACAAGA+TGG | 0.627892 | 1.2:+50668285 | MS.gene30874:CDS |
| ACAACCATAACCATTAGTAT+CGG | 0.628845 | 1.2:-50668979 | None:intergenic |
| CAGAAAGATTGGAATCCCAA+AGG | 0.628924 | 1.2:+50672478 | MS.gene30874:CDS |
| TGGGCCTCGGATTCAAAGGA+CGG | 0.630389 | 1.2:+50668602 | MS.gene30874:CDS |
| AGATGCTAGTTCGTCACTGG+AGG | 0.630996 | 1.2:+50669124 | MS.gene30874:CDS |
| AATACGGGTCTAATTCATAC+GGG | 0.631102 | 1.2:+50668676 | MS.gene30874:CDS |
| AATTAGTCGACATCTGGCAA+TGG | 0.632372 | 1.2:-50672837 | None:intergenic |
| TATGTATCTTGATAATTCCG+GGG | 0.634354 | 1.2:+50668419 | MS.gene30874:CDS |
| ACTCCAACATCGAGTACTCA+GGG | 0.639208 | 1.2:+50670230 | MS.gene30874:CDS |
| GCCGAAAGATGCAATTCCTG+TGG | 0.644290 | 1.2:+50670046 | MS.gene30874:CDS |
| GGATTGGAGATCTCCCTCTG+TGG | 0.647021 | 1.2:+50669813 | MS.gene30874:intron |
| AACTTTGAGTGGGGCCAAAG+CGG | 0.647796 | 1.2:-50669003 | None:intergenic |
| TGATTATAATCCATTCTATG+CGG | 0.649806 | 1.2:+50672421 | MS.gene30874:CDS |
| GACATGTCAGTATCAAATGA+CGG | 0.651466 | 1.2:+50669563 | MS.gene30874:CDS |
| AACCCTTGTAGAGAAACTGA+AGG | 0.651797 | 1.2:-50670342 | None:intergenic |
| GAGGAGACCGACATATGCGA+AGG | 0.656528 | 1.2:+50668858 | MS.gene30874:CDS |
| ACCACCAAATGGATGAAAAG+GGG | 0.657193 | 1.2:-50668250 | None:intergenic |
| TGTTGATGGTCATATATTGA+CGG | 0.659029 | 1.2:+50668761 | MS.gene30874:CDS |
| AGATTGGACACAATCTGGTG+TGG | 0.664917 | 1.2:+50670778 | MS.gene30874:CDS |
| CAGCTTGCTAATATAATCAG+CGG | 0.667836 | 1.2:-50668916 | None:intergenic |
| GTGGAAACATGTCATTGACG+AGG | 0.671751 | 1.2:-50672669 | None:intergenic |
| AGAAGCAGGACTATTTGTGG+AGG | 0.675554 | 1.2:-50669405 | None:intergenic |
| GTATCTTGATAATTCCGGGG+AGG | 0.679242 | 1.2:+50668422 | MS.gene30874:CDS |
| TGGAAACATGTCATTGACGA+GGG | 0.689709 | 1.2:-50672668 | None:intergenic |
| ACCAAACCTAACATACCAAG+GGG | 0.693606 | 1.2:-50668322 | None:intergenic |
| CCTTAAGTTCATGACCACAG+AGG | 0.761472 | 1.2:-50669827 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGAAAATTGAATGT+TGG | - | chr1.2:50672368-50672387 | None:intergenic | 15.0% |
| !! | AAAATAAAAACTGATTATGA+TGG | - | chr1.2:50671768-50671787 | None:intergenic | 15.0% |
| !! | AAATAAAAACTGATTATGAT+GGG | - | chr1.2:50671767-50671786 | None:intergenic | 15.0% |
| !! | TAATCTTAACAAAATTGATT+TGG | + | chr1.2:50671678-50671697 | MS.gene30874:intron | 15.0% |
| !! | TTAATATTTAATGCTTAACT+TGG | + | chr1.2:50671155-50671174 | MS.gene30874:intron | 15.0% |
| !!! | AAATATAGAGGTTTTAATAT+TGG | - | chr1.2:50671323-50671342 | None:intergenic | 15.0% |
| !!! | TTATTCATCTTATAATTTTC+AGG | + | chr1.2:50669792-50669811 | MS.gene30874:intron | 15.0% |
| !!! | TTCCTAAATTTTACAATATT+TGG | + | chr1.2:50671558-50671577 | MS.gene30874:intron | 15.0% |
| !!! | TTTTATGTATTTATTTATGC+AGG | + | chr1.2:50670833-50670852 | MS.gene30874:intron | 15.0% |
| !!! | TTTTCTTTTTTTTTTTTTGC+AGG | + | chr1.2:50672376-50672395 | MS.gene30874:intron | 15.0% |
| !! | AAAATATGTTAGTAAGTAGT+AGG | + | chr1.2:50671852-50671871 | MS.gene30874:intron | 20.0% |
| !! | AATAAGTAATAATGCTTCTT+AGG | + | chr1.2:50670563-50670582 | MS.gene30874:intron | 20.0% |
| !! | AGTGGAAAATTTCTTTAATT+AGG | - | chr1.2:50671463-50671482 | None:intergenic | 20.0% |
| !! | ATAAAAACGTATAAACACAA+AGG | - | chr1.2:50672155-50672174 | None:intergenic | 20.0% |
| !! | ATAAATCATCAAAAGAATCT+TGG | - | chr1.2:50668653-50668672 | None:intergenic | 20.0% |
| !! | ATTAAAACCTCTATATTTAC+AGG | + | chr1.2:50671325-50671344 | MS.gene30874:intron | 20.0% |
| !! | ATTATCAAACAAGTAATTAC+TGG | - | chr1.2:50669752-50669771 | None:intergenic | 20.0% |
| !! | CATGACTTAACAAAAATAAT+GGG | - | chr1.2:50671707-50671726 | None:intergenic | 20.0% |
| !! | GACCAAATATTGTAAAATTT+AGG | - | chr1.2:50671563-50671582 | None:intergenic | 20.0% |
| !! | TAAGAATAATAATTCAAGTG+AGG | + | chr1.2:50669625-50669644 | MS.gene30874:CDS | 20.0% |
| !! | TCATGACTTAACAAAAATAA+TGG | - | chr1.2:50671708-50671727 | None:intergenic | 20.0% |
| !! | TGAAAATATGTTCTTAGTAA+TGG | + | chr1.2:50672052-50672071 | MS.gene30874:intron | 20.0% |
| !!! | AGATTCTTTTGATGATTTAT+CGG | + | chr1.2:50668653-50668672 | MS.gene30874:CDS | 20.0% |
| !!! | AGTGATAATTTTTTGAGTAA+TGG | + | chr1.2:50668510-50668529 | MS.gene30874:CDS | 20.0% |
| !!! | GACTTGATATATTGTATTTT+TGG | + | chr1.2:50672213-50672232 | MS.gene30874:intron | 20.0% |
| !!! | TATGAACAAATGGTATTTTA+AGG | + | chr1.2:50671535-50671554 | MS.gene30874:intron | 20.0% |
| !!! | TATTTACTTTTTCATTCTAG+TGG | - | chr1.2:50671030-50671049 | None:intergenic | 20.0% |
| !!! | TTTTTATTTGTGAATATTGC+AGG | + | chr1.2:50672782-50672801 | MS.gene30874:intron | 20.0% |
| ! | AAATGATGCAAAAACTAACA+GGG | + | chr1.2:50672592-50672611 | MS.gene30874:intron | 25.0% |
| ! | ATAAAAAATACGCACCTTAA+TGG | - | chr1.2:50670819-50670838 | None:intergenic | 25.0% |
| ! | ATCTAGAAATACATCTTCAT+TGG | - | chr1.2:50670183-50670202 | None:intergenic | 25.0% |
| ! | CCAAAATGCAATTAGTTAAA+TGG | + | chr1.2:50670894-50670913 | MS.gene30874:intron | 25.0% |
| ! | GAAAAAGTAAATACACGAAA+TGG | + | chr1.2:50671037-50671056 | MS.gene30874:intron | 25.0% |
| ! | GATTGCAAATTATGAACAAA+TGG | + | chr1.2:50671525-50671544 | MS.gene30874:intron | 25.0% |
| ! | GTTGTTAGAATAAGTGTTAA+TGG | + | chr1.2:50668378-50668397 | MS.gene30874:CDS | 25.0% |
| ! | TAAATGATGCAAAAACTAAC+AGG | + | chr1.2:50672591-50672610 | MS.gene30874:intron | 25.0% |
| ! | TAGACTTGATCATAGTATTT+CGG | + | chr1.2:50668536-50668555 | MS.gene30874:CDS | 25.0% |
| ! | TCAAACTTGTCATTAAAATG+TGG | - | chr1.2:50672738-50672757 | None:intergenic | 25.0% |
| ! | TCATTAAAATGTGGAATTTG+TGG | - | chr1.2:50672729-50672748 | None:intergenic | 25.0% |
| ! | TGATTATAATCCATTCTATG+CGG | + | chr1.2:50672421-50672440 | MS.gene30874:CDS | 25.0% |
| ! | TTGATATTCATCTACTGTTT+AGG | + | chr1.2:50670383-50670402 | MS.gene30874:intron | 25.0% |
| ! | TTGATGCTCATATATACTTA+TGG | + | chr1.2:50670479-50670498 | MS.gene30874:CDS | 25.0% |
| !! | AAATTTCAAGGTGTTCTTAA+AGG | + | chr1.2:50668345-50668364 | MS.gene30874:CDS | 25.0% |
| !! | AGAATCAAAATCTTGTTATC+AGG | + | chr1.2:50669940-50669959 | MS.gene30874:CDS | 25.0% |
| !! | ATATGTATCTTGATAATTCC+GGG | + | chr1.2:50668418-50668437 | MS.gene30874:CDS | 25.0% |
| !! | CATATGTATCTTGATAATTC+CGG | + | chr1.2:50668417-50668436 | MS.gene30874:CDS | 25.0% |
| !! | CATTTTAAGCTTCAAACATA+TGG | - | chr1.2:50670600-50670619 | None:intergenic | 25.0% |
| !! | CCATTTAACTAATTGCATTT+TGG | - | chr1.2:50670897-50670916 | None:intergenic | 25.0% |
| !! | CTACTTACTAACATATTTTC+AGG | - | chr1.2:50671851-50671870 | None:intergenic | 25.0% |
| !! | GAAGTTCAAATGTTTTATGT+AGG | + | chr1.2:50671726-50671745 | MS.gene30874:intron | 25.0% |
| !! | TAGTTTTTGCATCATTTAGT+TGG | - | chr1.2:50672589-50672608 | None:intergenic | 25.0% |
| !! | TGAAATAACCAAGTGTTTTA+TGG | + | chr1.2:50671280-50671299 | MS.gene30874:intron | 25.0% |
| !! | TGTTCATTTTCATAAACAAC+AGG | - | chr1.2:50669239-50669258 | None:intergenic | 25.0% |
| !! | TGTTCATTTTCATCAACTAT+AGG | - | chr1.2:50669185-50669204 | None:intergenic | 25.0% |
| !! | TTTGATGATTTATCGGAATA+CGG | + | chr1.2:50668660-50668679 | MS.gene30874:CDS | 25.0% |
| !!! | AGAATGGATTATAATCAGAA+GGG | - | chr1.2:50672418-50672437 | None:intergenic | 25.0% |
| !!! | AGTTTGTTTGTTATTCTGTT+CGG | - | chr1.2:50669543-50669562 | None:intergenic | 25.0% |
| !!! | ATCTTACAAGCCAATTTTTT+AGG | + | chr1.2:50671883-50671902 | MS.gene30874:intron | 25.0% |
| !!! | CATCTTATAATTTTCAGGAT+TGG | + | chr1.2:50669797-50669816 | MS.gene30874:intron | 25.0% |
| !!! | TAGAATGGATTATAATCAGA+AGG | - | chr1.2:50672419-50672438 | None:intergenic | 25.0% |
| !!! | TCTTACAAGCCAATTTTTTA+GGG | + | chr1.2:50671884-50671903 | MS.gene30874:intron | 25.0% |
| !!! | TGAGTTTTGTTTATTAAGAG+AGG | + | chr1.2:50670436-50670455 | MS.gene30874:intron | 25.0% |
| !!! | TTCTTTTTTTCGCTTCTTTT+AGG | + | chr1.2:50670717-50670736 | MS.gene30874:intron | 25.0% |
| !!! | TTTTGATTCTTAAGTATTGC+CGG | - | chr1.2:50669930-50669949 | None:intergenic | 25.0% |
| AAACCTCTATATTTACAGGA+TGG | + | chr1.2:50671329-50671348 | MS.gene30874:intron | 30.0% | |
| AAGTGAAGGAAATAATCCAT+CGG | - | chr1.2:50671390-50671409 | None:intergenic | 30.0% | |
| AATATTCATCATTAACCCGA+AGG | + | chr1.2:50672505-50672524 | MS.gene30874:CDS | 30.0% | |
| AATTGTTAAGATTCCCACAT+TGG | + | chr1.2:50671814-50671833 | MS.gene30874:intron | 30.0% | |
| ACAACCATAACCATTAGTAT+CGG | - | chr1.2:50668982-50669001 | None:intergenic | 30.0% | |
| ACCATCTTAGAATTTGGATT+GGG | - | chr1.2:50671921-50671940 | None:intergenic | 30.0% | |
| ACTACAACTCATGGAATTAT+TGG | + | chr1.2:50672808-50672827 | MS.gene30874:CDS | 30.0% | |
| ACTCATACCATCTTAGAATT+TGG | - | chr1.2:50671927-50671946 | None:intergenic | 30.0% | |
| AGAAATCCTCAATTTCATCT+AGG | + | chr1.2:50668828-50668847 | MS.gene30874:CDS | 30.0% | |
| AGATAAATCACCACAACTAT+AGG | - | chr1.2:50671127-50671146 | None:intergenic | 30.0% | |
| AGGTATTTCAATTACACAAC+AGG | + | chr1.2:50670456-50670475 | MS.gene30874:intron | 30.0% | |
| ATAAACACAAAGGTAATGCA+TGG | - | chr1.2:50672145-50672164 | None:intergenic | 30.0% | |
| ATATGTTAGTAAGTAGTAGG+AGG | + | chr1.2:50671855-50671874 | MS.gene30874:intron | 30.0% | |
| ATCATAGTATTTCGGATTCT+GGG | + | chr1.2:50668544-50668563 | MS.gene30874:CDS | 30.0% | |
| CTCATATATACTTATGGAAG+TGG | + | chr1.2:50670485-50670504 | MS.gene30874:CDS | 30.0% | |
| CTTATTATCTTCAACTGAAG+TGG | - | chr1.2:50669609-50669628 | None:intergenic | 30.0% | |
| GAACTTAGTTACAGAAAGAT+TGG | + | chr1.2:50672467-50672486 | MS.gene30874:CDS | 30.0% | |
| GAATAATAATTCAAGTGAGG+TGG | + | chr1.2:50669628-50669647 | MS.gene30874:CDS | 30.0% | |
| GACAATTACCATAAAACACT+TGG | - | chr1.2:50671291-50671310 | None:intergenic | 30.0% | |
| GATGGAACTATTACAAAGTA+AGG | + | chr1.2:50670535-50670554 | MS.gene30874:intron | 30.0% | |
| GATTATAATCCATTCTATGC+GGG | + | chr1.2:50672422-50672441 | MS.gene30874:CDS | 30.0% | |
| TACCATCTTAGAATTTGGAT+TGG | - | chr1.2:50671922-50671941 | None:intergenic | 30.0% | |
| TCAAAAGCAAAATACAGCTA+TGG | + | chr1.2:50671084-50671103 | MS.gene30874:intron | 30.0% | |
| TTGGATTAATGTCAGGAAAA+TGG | + | chr1.2:50671174-50671193 | MS.gene30874:intron | 30.0% | |
| TTTCCATCCTGTAAATATAG+AGG | - | chr1.2:50671335-50671354 | None:intergenic | 30.0% | |
| ! | AAGAAATTTTCCACTTGCTT+TGG | + | chr1.2:50671468-50671487 | MS.gene30874:intron | 30.0% |
| ! | AGAAATTTTCCACTTGCTTT+GGG | + | chr1.2:50671469-50671488 | MS.gene30874:intron | 30.0% |
| ! | AGTGACATAATTTTGTGTTC+GGG | - | chr1.2:50672308-50672327 | None:intergenic | 30.0% |
| ! | ATGATGAATATTTTGCCCTT+TGG | - | chr1.2:50672497-50672516 | None:intergenic | 30.0% |
| ! | CAGTGACATAATTTTGTGTT+CGG | - | chr1.2:50672309-50672328 | None:intergenic | 30.0% |
| ! | GTTAGGTTTGGTAAATTTCA+AGG | + | chr1.2:50668333-50668352 | MS.gene30874:CDS | 30.0% |
| ! | GTTATTTCAATACCTGTTTC+AGG | - | chr1.2:50671269-50671288 | None:intergenic | 30.0% |
| ! | TAACTGGAGTAGGATTTTTA+AGG | + | chr1.2:50670871-50670890 | MS.gene30874:intron | 30.0% |
| ! | TATGTATCTTGATAATTCCG+GGG | + | chr1.2:50668419-50668438 | MS.gene30874:CDS | 30.0% |
| ! | TGATGAATATTTTGCCCTTT+GGG | - | chr1.2:50672496-50672515 | None:intergenic | 30.0% |
| ! | TGTTCATTTTCATCAACTAC+AGG | - | chr1.2:50669293-50669312 | None:intergenic | 30.0% |
| ! | TTATTCATCGATTGTGGATT+GGG | - | chr1.2:50672122-50672141 | None:intergenic | 30.0% |
| ! | TTGATGATTTATCGGAATAC+GGG | + | chr1.2:50668661-50668680 | MS.gene30874:CDS | 30.0% |
| ! | TTGTTCATTTTCGTCAACTA+CGG | - | chr1.2:50669348-50669367 | None:intergenic | 30.0% |
| !! | AGAGCACTTTTCTCAAAAAT+CGG | - | chr1.2:50670671-50670690 | None:intergenic | 30.0% |
| !! | ATTCTGAAGTTGGAGATTTA+TGG | - | chr1.2:50669439-50669458 | None:intergenic | 30.0% |
| !! | TGTTGATGGTCATATATTGA+CGG | + | chr1.2:50668761-50668780 | MS.gene30874:CDS | 30.0% |
| !! | TTGACCATCTTTAAGATTCA+AGG | - | chr1.2:50670312-50670331 | None:intergenic | 30.0% |
| !!! | CTTACAAGCCAATTTTTTAG+GGG | + | chr1.2:50671885-50671904 | MS.gene30874:intron | 30.0% |
| !!! | GGTTTTTTGTGATTGACAAA+TGG | - | chr1.2:50669048-50669067 | None:intergenic | 30.0% |
| AAAAACAACTTCTCAGCACA+GGG | - | chr1.2:50669722-50669741 | None:intergenic | 35.0% | |
| AAATCCTACTCCAGTTAAAC+TGG | - | chr1.2:50670868-50670887 | None:intergenic | 35.0% | |
| AAATCGGCAATAATAGCTTC+TGG | - | chr1.2:50670655-50670674 | None:intergenic | 35.0% | |
| AAATCTCCAACTTCAGAATC+AGG | + | chr1.2:50669440-50669459 | MS.gene30874:CDS | 35.0% | |
| AACCTTCAGTTTCTCTACAA+GGG | + | chr1.2:50670340-50670359 | MS.gene30874:CDS | 35.0% | |
| AATACGGGTCTAATTCATAC+GGG | + | chr1.2:50668676-50668695 | MS.gene30874:CDS | 35.0% | |
| AATCGGCAATAATAGCTTCT+GGG | - | chr1.2:50670654-50670673 | None:intergenic | 35.0% | |
| AATGCTTCTTAGGCTACAAA+GGG | + | chr1.2:50670573-50670592 | MS.gene30874:intron | 35.0% | |
| AATTCATACGGGACTTTAGA+TGG | + | chr1.2:50668687-50668706 | MS.gene30874:CDS | 35.0% | |
| AATTCCTGTGGAATATTCCA+GGG | + | chr1.2:50670058-50670077 | MS.gene30874:CDS | 35.0% | |
| ACAGTAGAAGATGCTTCTTA+AGG | - | chr1.2:50670943-50670962 | None:intergenic | 35.0% | |
| ACTCAAAGTTTGTCAAGAAG+AGG | + | chr1.2:50669016-50669035 | MS.gene30874:CDS | 35.0% | |
| AGAAAGATTGGAATCCCAAA+GGG | + | chr1.2:50672479-50672498 | MS.gene30874:CDS | 35.0% | |
| AGCTATGGATGATCTTATTG+CGG | + | chr1.2:50671099-50671118 | MS.gene30874:intron | 35.0% | |
| AGTGAAGGAAATAATCCATC+GGG | - | chr1.2:50671389-50671408 | None:intergenic | 35.0% | |
| ATGAATGTAGTTGGGAAAGT+TGG | + | chr1.2:50668192-50668211 | MS.gene30874:CDS | 35.0% | |
| CAAGCTGAAACTTCAAGTAA+AGG | + | chr1.2:50669659-50669678 | MS.gene30874:CDS | 35.0% | |
| CTTCTTGACAAACTTTGAGT+GGG | - | chr1.2:50669016-50669035 | None:intergenic | 35.0% | |
| GAAATAACAACAGGTCCATT+AGG | - | chr1.2:50671365-50671384 | None:intergenic | 35.0% | |
| GAATACGGGTCTAATTCATA+CGG | + | chr1.2:50668675-50668694 | MS.gene30874:CDS | 35.0% | |
| GACATGTCAGTATCAAATGA+CGG | + | chr1.2:50669563-50669582 | MS.gene30874:CDS | 35.0% | |
| GATCATAGTATTTCGGATTC+TGG | + | chr1.2:50668543-50668562 | MS.gene30874:CDS | 35.0% | |
| GATGGAAAAACCTTACCTAA+TGG | + | chr1.2:50671347-50671366 | MS.gene30874:CDS | 35.0% | |
| GCATCCTTGAATCTTAAAGA+TGG | + | chr1.2:50670305-50670324 | MS.gene30874:CDS | 35.0% | |
| GCTGATTATATTAGCAAGCT+GGG | + | chr1.2:50668918-50668937 | MS.gene30874:CDS | 35.0% | |
| GTCCTTAAAAATTGCTTCTG+AGG | - | chr1.2:50670260-50670279 | None:intergenic | 35.0% | |
| GTCTAACTATCCAGTTTAAC+TGG | + | chr1.2:50670855-50670874 | MS.gene30874:intron | 35.0% | |
| GTTCAAAATTGCTTGTCTAG+AGG | + | chr1.2:50672276-50672295 | MS.gene30874:CDS | 35.0% | |
| TAAAGAGATGTACTTGACGT+GGG | + | chr1.2:50669965-50669984 | MS.gene30874:CDS | 35.0% | |
| TAACCTTCAGTTTCTCTACA+AGG | + | chr1.2:50670339-50670358 | MS.gene30874:CDS | 35.0% | |
| TAATAATTCAAGTGAGGTGG+TGG | + | chr1.2:50669631-50669650 | MS.gene30874:CDS | 35.0% | |
| TAATGCTTCTTAGGCTACAA+AGG | + | chr1.2:50670572-50670591 | MS.gene30874:intron | 35.0% | |
| TACCAAACCTAACATACCAA+GGG | - | chr1.2:50668326-50668345 | None:intergenic | 35.0% | |
| TCACTCAACCCCTAAAAAAT+TGG | - | chr1.2:50671896-50671915 | None:intergenic | 35.0% | |
| TCAGAGACTTGAAATATCCA+GGG | - | chr1.2:50672195-50672214 | None:intergenic | 35.0% | |
| TCATAGTATTTCGGATTCTG+GGG | + | chr1.2:50668545-50668564 | MS.gene30874:CDS | 35.0% | |
| TCTTCTTGACAAACTTTGAG+TGG | - | chr1.2:50669017-50669036 | None:intergenic | 35.0% | |
| TGAATGTAGTTGGGAAAGTT+GGG | + | chr1.2:50668193-50668212 | MS.gene30874:CDS | 35.0% | |
| TGTTCGGTATAATCAGCAAT+AGG | - | chr1.2:50669527-50669546 | None:intergenic | 35.0% | |
| TTAAAGAGATGTACTTGACG+TGG | + | chr1.2:50669964-50669983 | MS.gene30874:CDS | 35.0% | |
| TTACCAAACCTAACATACCA+AGG | - | chr1.2:50668327-50668346 | None:intergenic | 35.0% | |
| TTACTTGAAGTTTCAGCTTG+AGG | - | chr1.2:50669659-50669678 | None:intergenic | 35.0% | |
| TTCTTGACAAACTTTGAGTG+GGG | - | chr1.2:50669015-50669034 | None:intergenic | 35.0% | |
| TTGTCAATCACAAAAAACCC+TGG | + | chr1.2:50669049-50669068 | MS.gene30874:CDS | 35.0% | |
| ! | AAATTTTCCACTTGCTTTGG+GGG | + | chr1.2:50671471-50671490 | MS.gene30874:intron | 35.0% |
| ! | AGTTTCTCTACAAGGGTTTT+AGG | + | chr1.2:50670347-50670366 | MS.gene30874:CDS | 35.0% |
| ! | ATTGTTGTTCAGCAACAAGA+TGG | + | chr1.2:50668285-50668304 | MS.gene30874:CDS | 35.0% |
| ! | CAAGCAATTTTGAACTCATG+TGG | - | chr1.2:50672271-50672290 | None:intergenic | 35.0% |
| ! | CTCCTCAGAAGCAATTTTTA+AGG | + | chr1.2:50670255-50670274 | MS.gene30874:CDS | 35.0% |
| ! | GAAATTTTCCACTTGCTTTG+GGG | + | chr1.2:50671470-50671489 | MS.gene30874:intron | 35.0% |
| ! | GCTTAACTTGGATTAATGTC+AGG | + | chr1.2:50671167-50671186 | MS.gene30874:intron | 35.0% |
| ! | GTTATTCATCGATTGTGGAT+TGG | - | chr1.2:50672123-50672142 | None:intergenic | 35.0% |
| ! | TAATCAAGAAAGCACACCTT+CGG | - | chr1.2:50672524-50672543 | None:intergenic | 35.0% |
| ! | TGTTCATTTTCGTCAACTAC+GGG | - | chr1.2:50669347-50669366 | None:intergenic | 35.0% |
| ! | TTCTAAAAGAGTTCCAGACT+CGG | - | chr1.2:50670207-50670226 | None:intergenic | 35.0% |
| !! | AAGTGCTCTAAACAGTTTTG+AGG | + | chr1.2:50670682-50670701 | MS.gene30874:intron | 35.0% |
| !! | ACCTTACAAACCAGTTTTGT+AGG | + | chr1.2:50672084-50672103 | MS.gene30874:intron | 35.0% |
| !! | ATACCTGTTTCAGGTTAAGT+AGG | - | chr1.2:50671260-50671279 | None:intergenic | 35.0% |
| !! | CAGCTTGCTAATATAATCAG+CGG | - | chr1.2:50668919-50668938 | None:intergenic | 35.0% |
| !! | CCTTACAAACCAGTTTTGTA+GGG | + | chr1.2:50672085-50672104 | MS.gene30874:intron | 35.0% |
| !! | CTTACAAACCAGTTTTGTAG+GGG | + | chr1.2:50672086-50672105 | MS.gene30874:intron | 35.0% |
| !! | TCTTTTAGGTCTGACGTTTT+GGG | + | chr1.2:50670731-50670750 | MS.gene30874:intron | 35.0% |
| !! | TGAGCTATTTGCTTGCTATT+GGG | + | chr1.2:50671962-50671981 | MS.gene30874:intron | 35.0% |
| !! | TTCTTTTAGGTCTGACGTTT+TGG | + | chr1.2:50670730-50670749 | MS.gene30874:intron | 35.0% |
| !! | TTGAGCTATTTGCTTGCTAT+TGG | + | chr1.2:50671961-50671980 | MS.gene30874:intron | 35.0% |
| !!! | AATTTTTTAGGGGTTGAGTG+AGG | + | chr1.2:50671895-50671914 | MS.gene30874:intron | 35.0% |
| !!! | TATTTTGTCTAGTTCTTCCC+AGG | + | chr1.2:50672561-50672580 | MS.gene30874:intron | 35.0% |
| !!! | TGCTGAGAAGTTGTTTTTCT+TGG | + | chr1.2:50669724-50669743 | MS.gene30874:intron | 35.0% |
| AACAACAGGTCCATTAGGTA+AGG | - | chr1.2:50671360-50671379 | None:intergenic | 40.0% | |
| AACCCTTGTAGAGAAACTGA+AGG | - | chr1.2:50670345-50670364 | None:intergenic | 40.0% | |
| AATCCATTCTATGCGGGATT+TGG | + | chr1.2:50672428-50672447 | MS.gene30874:CDS | 40.0% | |
| ACAAATAGTCCTGCTTCTTC+TGG | + | chr1.2:50669410-50669429 | MS.gene30874:CDS | 40.0% | |
| ACCAAACCTAACATACCAAG+GGG | - | chr1.2:50668325-50668344 | None:intergenic | 40.0% | |
| ACCACCAAATGGATGAAAAG+GGG | - | chr1.2:50668253-50668272 | None:intergenic | 40.0% | |
| AGAAGAAGCAGGACTATTTG+TGG | - | chr1.2:50669411-50669430 | None:intergenic | 40.0% | |
| AGCTCAGAAATGCTCTTACA+AGG | + | chr1.2:50672332-50672351 | MS.gene30874:intron | 40.0% | |
| AGGTCATATCTCATCCAATG+TGG | - | chr1.2:50671831-50671850 | None:intergenic | 40.0% | |
| ATAATCAGCAATAGGAGAGC+AGG | - | chr1.2:50669519-50669538 | None:intergenic | 40.0% | |
| ATCAGGACTTCAAGATCAAG+AGG | + | chr1.2:50669457-50669476 | MS.gene30874:CDS | 40.0% | |
| ATCGGCAATAATAGCTTCTG+GGG | - | chr1.2:50670653-50670672 | None:intergenic | 40.0% | |
| ATCGTGATTTCAGACGTTGA+TGG | + | chr1.2:50670517-50670536 | MS.gene30874:CDS | 40.0% | |
| ATTCAAAGGACGGAATCTGA+TGG | + | chr1.2:50668612-50668631 | MS.gene30874:CDS | 40.0% | |
| ATTGTCTTGACCCTTCGAAA+AGG | - | chr1.2:50670137-50670156 | None:intergenic | 40.0% | |
| CAAAAACTAACAGGGTGAAG+TGG | + | chr1.2:50672600-50672619 | MS.gene30874:intron | 40.0% | |
| CAAGGATGCTATCTGTTCAT+TGG | - | chr1.2:50670294-50670313 | None:intergenic | 40.0% | |
| CAATTCCTGTGGAATATTCC+AGG | + | chr1.2:50670057-50670076 | MS.gene30874:CDS | 40.0% | |
| CACCACCAAATGGATGAAAA+GGG | - | chr1.2:50668254-50668273 | None:intergenic | 40.0% | |
| CAGAAAGATTGGAATCCCAA+AGG | + | chr1.2:50672478-50672497 | MS.gene30874:CDS | 40.0% | |
| CATGAACTTAAGGCAGGTAT+GGG | + | chr1.2:50669837-50669856 | MS.gene30874:CDS | 40.0% | |
| CATGTTTCCACCAACTTCTT+TGG | + | chr1.2:50672681-50672700 | MS.gene30874:CDS | 40.0% | |
| CTATCCAGTTTAACTGGAGT+AGG | + | chr1.2:50670861-50670880 | MS.gene30874:intron | 40.0% | |
| CTTAAGTTCATGACCACAGA+GGG | - | chr1.2:50669829-50669848 | None:intergenic | 40.0% | |
| CTTCCTACTTAACCTGAAAC+AGG | + | chr1.2:50671254-50671273 | MS.gene30874:CDS | 40.0% | |
| GAAAAACAACTTCTCAGCAC+AGG | - | chr1.2:50669723-50669742 | None:intergenic | 40.0% | |
| GAAAGATGAAGAGGATTCGT+CGG | + | chr1.2:50668578-50668597 | MS.gene30874:CDS | 40.0% | |
| GACACCGATACTAATGGTTA+TGG | + | chr1.2:50668975-50668994 | MS.gene30874:CDS | 40.0% | |
| GATGCTATCTGTTCATTGGT+TGG | - | chr1.2:50670290-50670309 | None:intergenic | 40.0% | |
| GCAAATAGCTCAACAGATCT+TGG | - | chr1.2:50671954-50671973 | None:intergenic | 40.0% | |
| GGTCATATCTCATCCAATGT+GGG | - | chr1.2:50671830-50671849 | None:intergenic | 40.0% | |
| GTAAGCGCACTCATCAAATA+AGG | + | chr1.2:50671599-50671618 | MS.gene30874:intron | 40.0% | |
| GTCAGAGACTTGAAATATCC+AGG | - | chr1.2:50672196-50672215 | None:intergenic | 40.0% | |
| GTCCAATCTTTGCCAACTAA+AGG | - | chr1.2:50670767-50670786 | None:intergenic | 40.0% | |
| GTGGCTATTAGTCAACGTAT+TGG | + | chr1.2:50672619-50672638 | MS.gene30874:CDS | 40.0% | |
| GTTGGGAGTTTGATAAGTCA+AGG | + | chr1.2:50668210-50668229 | MS.gene30874:CDS | 40.0% | |
| TAACTCAACCCCTACAAAAC+TGG | - | chr1.2:50672097-50672116 | None:intergenic | 40.0% | |
| TATATTGACGGCTCCTATCT+CGG | + | chr1.2:50668773-50668792 | MS.gene30874:CDS | 40.0% | |
| TATTGCGGTACCTATAGTTG+TGG | + | chr1.2:50671114-50671133 | MS.gene30874:intron | 40.0% | |
| TCAAGATCAAGAGGTTGAGA+AGG | + | chr1.2:50669466-50669485 | MS.gene30874:CDS | 40.0% | |
| TCAATCACAAAAAACCCTGG+AGG | + | chr1.2:50669052-50669071 | MS.gene30874:CDS | 40.0% | |
| TCATGAACTTAAGGCAGGTA+TGG | + | chr1.2:50669836-50669855 | MS.gene30874:CDS | 40.0% | |
| TCCACAGGAATTGCATCTTT+CGG | - | chr1.2:50670050-50670069 | None:intergenic | 40.0% | |
| TCCTCAATTTCATCTAGGTC+CGG | + | chr1.2:50668833-50668852 | MS.gene30874:CDS | 40.0% | |
| TCTTATCACTTCCATCCGAA+CGG | - | chr1.2:50672242-50672261 | None:intergenic | 40.0% | |
| TGCCTTTAGTTGGCAAAGAT+TGG | + | chr1.2:50670762-50670781 | MS.gene30874:CDS | 40.0% | |
| TGGAAACATGTCATTGACGA+GGG | - | chr1.2:50672671-50672690 | None:intergenic | 40.0% | |
| TTCAAAGGACGGAATCTGAT+GGG | + | chr1.2:50668613-50668632 | MS.gene30874:CDS | 40.0% | |
| TTGACCCTTCGAAAAGGATT+AGG | - | chr1.2:50670131-50670150 | None:intergenic | 40.0% | |
| ! | AATCAAGAAAGCACACCTTC+GGG | - | chr1.2:50672523-50672542 | None:intergenic | 40.0% |
| ! | CGCTGATTATATTAGCAAGC+TGG | + | chr1.2:50668917-50668936 | MS.gene30874:CDS | 40.0% |
| ! | GCATGGTTATTCATCGATTG+TGG | - | chr1.2:50672128-50672147 | None:intergenic | 40.0% |
| ! | GCCCAATCCAAATTCTAAGA+TGG | + | chr1.2:50671917-50671936 | MS.gene30874:intron | 40.0% |
| ! | GTTTGAAGCCCATCGAATAT+CGG | + | chr1.2:50669881-50669900 | MS.gene30874:CDS | 40.0% |
| ! | TAGCTTCTGGGGAAAACTAA+AGG | - | chr1.2:50670642-50670661 | None:intergenic | 40.0% |
| ! | TTGGCCTAATCCTTTTCGAA+GGG | + | chr1.2:50670124-50670143 | MS.gene30874:CDS | 40.0% |
| ! | TTTGGCCTAATCCTTTTCGA+AGG | + | chr1.2:50670123-50670142 | MS.gene30874:CDS | 40.0% |
| !! | AAGGCTTTTCTGTGCCATTA+AGG | + | chr1.2:50670802-50670821 | MS.gene30874:CDS | 40.0% |
| !! | AATTTTCCACTTGCTTTGGG+GGG | + | chr1.2:50671472-50671491 | MS.gene30874:intron | 40.0% |
| !! | CCCTACAAAACTGGTTTGTA+AGG | - | chr1.2:50672088-50672107 | None:intergenic | 40.0% |
| !! | GTACATTTAGAAGTACCCCT+TGG | + | chr1.2:50668307-50668326 | MS.gene30874:CDS | 40.0% |
| !! | GTATTTCTAGATTCCGAGTC+TGG | + | chr1.2:50670191-50670210 | MS.gene30874:CDS | 40.0% |
| !! | TGAAGTCCTGATTCTGAAGT+TGG | - | chr1.2:50669449-50669468 | None:intergenic | 40.0% |
| !! | TTTCCTTCACTTTTCCGAGA+AGG | + | chr1.2:50671398-50671417 | MS.gene30874:CDS | 40.0% |
| !!! | AAGGGTTTTAGGAACACAAC+AGG | + | chr1.2:50670358-50670377 | MS.gene30874:CDS | 40.0% |
| !!! | TTGTATTTTTGGTCCCCGTT+CGG | + | chr1.2:50672224-50672243 | MS.gene30874:intron | 40.0% |
| AAAGGTGACCAAGTCCATTC+TGG | + | chr1.2:50669677-50669696 | MS.gene30874:CDS | 45.0% | |
| AACTCCAACATCGAGTACTC+AGG | + | chr1.2:50670229-50670248 | MS.gene30874:CDS | 45.0% | |
| AAGAGATGCTAGTTCGTCAC+TGG | + | chr1.2:50669121-50669140 | MS.gene30874:CDS | 45.0% | |
| AAGCATATCTCATCCAACGC+CGG | - | chr1.2:50672032-50672051 | None:intergenic | 45.0% | |
| AATAGTCCTGCTTCTTCTGG+TGG | + | chr1.2:50669413-50669432 | MS.gene30874:CDS | 45.0% | |
| AATCCTCTGCCGATATTCGA+TGG | - | chr1.2:50669893-50669912 | None:intergenic | 45.0% | |
| ACATCAACAGCACCACCAAA+TGG | - | chr1.2:50668264-50668283 | None:intergenic | 45.0% | |
| ACCCCTTGGTATGTTAGGTT+TGG | + | chr1.2:50668321-50668340 | MS.gene30874:CDS | 45.0% | |
| ACTCCAACATCGAGTACTCA+GGG | + | chr1.2:50670230-50670249 | MS.gene30874:CDS | 45.0% | |
| ACTTAAGGCAGGTATGGGTT+TGG | + | chr1.2:50669842-50669861 | MS.gene30874:CDS | 45.0% | |
| AGAAGCAGGACTATTTGTGG+AGG | - | chr1.2:50669408-50669427 | None:intergenic | 45.0% | |
| AGATTGGACACAATCTGGTG+TGG | + | chr1.2:50670778-50670797 | MS.gene30874:CDS | 45.0% | |
| AGTTCCTGGTCAAATATGCC+TGG | - | chr1.2:50671236-50671255 | None:intergenic | 45.0% | |
| ATCCTCTGCCGATATTCGAT+GGG | - | chr1.2:50669892-50669911 | None:intergenic | 45.0% | |
| ATTGCATCTTTCGGCTCAAC+AGG | - | chr1.2:50670041-50670060 | None:intergenic | 45.0% | |
| CAATGCGACACCGATACTAA+TGG | + | chr1.2:50668969-50668988 | MS.gene30874:CDS | 45.0% | |
| CAGCGACTGATGATAAATGG+AGG | + | chr1.2:50671623-50671642 | MS.gene30874:intron | 45.0% | |
| CAGGTTAAGTAGGAAGTTCC+TGG | - | chr1.2:50671250-50671269 | None:intergenic | 45.0% | |
| CCATCGGGTGAAATAACAAC+AGG | - | chr1.2:50671374-50671393 | None:intergenic | 45.0% | |
| CCTCTGTGGTCATGAACTTA+AGG | + | chr1.2:50669827-50669846 | MS.gene30874:CDS | 45.0% | |
| CCTTAAGTTCATGACCACAG+AGG | - | chr1.2:50669830-50669849 | None:intergenic | 45.0% | |
| CTCCATTTATCATCAGTCGC+TGG | - | chr1.2:50671625-50671644 | None:intergenic | 45.0% | |
| CTTATCACTTCCATCCGAAC+GGG | - | chr1.2:50672241-50672260 | None:intergenic | 45.0% | |
| CTTCACAAAATAAGCCTCCC+CGG | - | chr1.2:50668439-50668458 | None:intergenic | 45.0% | |
| GAGGTTGAGAAGGATTCATC+AGG | + | chr1.2:50669476-50669495 | MS.gene30874:CDS | 45.0% | |
| GATGTACTTGACGTGGGAAA+AGG | + | chr1.2:50669971-50669990 | MS.gene30874:CDS | 45.0% | |
| GCACCACCAAATGGATGAAA+AGG | - | chr1.2:50668255-50668274 | None:intergenic | 45.0% | |
| GCGCACTCAGAAACAATAGT+TGG | - | chr1.2:50671203-50671222 | None:intergenic | 45.0% | |
| GCTTCGGTTGAAAGATGAAG+AGG | + | chr1.2:50668569-50668588 | MS.gene30874:CDS | 45.0% | |
| GGACAGTTCATGCCTTTAGT+TGG | + | chr1.2:50670752-50670771 | MS.gene30874:CDS | 45.0% | |
| GGCAAAGATTGGACACAATC+TGG | + | chr1.2:50670773-50670792 | MS.gene30874:CDS | 45.0% | |
| GTCTTAACACACACCCCTAA+AGG | - | chr1.2:50672008-50672027 | None:intergenic | 45.0% | |
| GTGGAAACATGTCATTGACG+AGG | - | chr1.2:50672672-50672691 | None:intergenic | 45.0% | |
| TCACCTTCTCGGAAAAGTGA+AGG | - | chr1.2:50671404-50671423 | None:intergenic | 45.0% | |
| TCCAGATGTCCAGTCCTTTA+GGG | + | chr1.2:50671991-50672010 | MS.gene30874:intron | 45.0% | |
| TCCATTGCCTTCGCATATGT+CGG | - | chr1.2:50668868-50668887 | None:intergenic | 45.0% | |
| TGAGTACTCGATGTTGGAGT+TGG | - | chr1.2:50670230-50670249 | None:intergenic | 45.0% | |
| TGATTGTTGATCACCATCCC+TGG | - | chr1.2:50670078-50670097 | None:intergenic | 45.0% | |
| TGCAGGAAGACTACAACTCA+TGG | + | chr1.2:50672799-50672818 | MS.gene30874:intron | 45.0% | |
| TGGTTATGGTTGTACCGCTT+TGG | + | chr1.2:50668989-50669008 | MS.gene30874:CDS | 45.0% | |
| TGTGGTCATGAACTTAAGGC+AGG | + | chr1.2:50669831-50669850 | MS.gene30874:CDS | 45.0% | |
| TTATCACTTCCATCCGAACG+GGG | - | chr1.2:50672240-50672259 | None:intergenic | 45.0% | |
| TTCTCGAATTTCGACCTCCA+GGG | - | chr1.2:50669069-50669088 | None:intergenic | 45.0% | |
| TTCTGCTCTGATTCCGAGAT+AGG | - | chr1.2:50668789-50668808 | None:intergenic | 45.0% | |
| TTGCCAAATCCCGCATAGAA+TGG | - | chr1.2:50672434-50672453 | None:intergenic | 45.0% | |
| TTGTCCAGGCATATTTGACC+AGG | + | chr1.2:50671229-50671248 | MS.gene30874:CDS | 45.0% | |
| ! | ACCCCTTTTCATCCATTTGG+TGG | + | chr1.2:50668249-50668268 | MS.gene30874:CDS | 45.0% |
| ! | ATGAAGAGGATTCGTCGGTT+GGG | + | chr1.2:50668583-50668602 | MS.gene30874:CDS | 45.0% |
| ! | GAAGTACCCCTTGGTATGTT+AGG | + | chr1.2:50668316-50668335 | MS.gene30874:CDS | 45.0% |
| ! | GCATCATTTAGTTGGTGCCT+GGG | - | chr1.2:50672581-50672600 | None:intergenic | 45.0% |
| ! | GCTACCCCTTTTCATCCATT+TGG | + | chr1.2:50668246-50668265 | MS.gene30874:CDS | 45.0% |
| ! | GGATTTTGCAAACTCTGCAC+CGG | + | chr1.2:50669908-50669927 | MS.gene30874:CDS | 45.0% |
| ! | GGCAATGGAGAGTTTAGTTC+CGG | + | chr1.2:50668879-50668898 | MS.gene30874:CDS | 45.0% |
| ! | GTATCTTGATAATTCCGGGG+AGG | + | chr1.2:50668422-50668441 | MS.gene30874:CDS | 45.0% |
| ! | TACCCAAACCAGAATGGACT+TGG | - | chr1.2:50669688-50669707 | None:intergenic | 45.0% |
| ! | TGACCAAGTCCATTCTGGTT+TGG | + | chr1.2:50669682-50669701 | MS.gene30874:CDS | 45.0% |
| ! | TGCATCATTTAGTTGGTGCC+TGG | - | chr1.2:50672582-50672601 | None:intergenic | 45.0% |
| !! | ATGGTCTTGGTGAGTGTTGA+TGG | + | chr1.2:50668747-50668766 | MS.gene30874:CDS | 45.0% |
| !! | CCTGTTGTTATTTCACCCGA+TGG | + | chr1.2:50671371-50671390 | MS.gene30874:CDS | 45.0% |
| !! | GACCAAGTCCATTCTGGTTT+GGG | + | chr1.2:50669683-50669702 | MS.gene30874:CDS | 45.0% |
| !! | GTTCTAGGAATGGCTGCATT+TGG | + | chr1.2:50670005-50670024 | MS.gene30874:CDS | 45.0% |
| !! | TCAAAAGTGCCTCACCTTCT+CGG | - | chr1.2:50671415-50671434 | None:intergenic | 45.0% |
| !! | TGCTCCTCTTGTTCTAGGAA+TGG | + | chr1.2:50669995-50670014 | MS.gene30874:CDS | 45.0% |
| !! | TTCACTTTTCCGAGAAGGTG+AGG | + | chr1.2:50671403-50671422 | MS.gene30874:intron | 45.0% |
| !!! | GGAGGCTTATTTTGTGAAGG+AGG | + | chr1.2:50668440-50668459 | MS.gene30874:CDS | 45.0% |
| !!! | GGCTTATTTTGTGAAGGAGG+CGG | + | chr1.2:50668443-50668462 | MS.gene30874:CDS | 45.0% |
| !!! | ATAAAAATTTTAAAATTCTT+CGG | - | chr1.2:50672769-50672788 | None:intergenic | 5.0% |
| AACACACACCCCTAAAGGAC+TGG | - | chr1.2:50672003-50672022 | None:intergenic | 50.0% | |
| AACTTTGAGTGGGGCCAAAG+CGG | - | chr1.2:50669006-50669025 | None:intergenic | 50.0% | |
| AAGGAGGCGGATGAGGATAA+AGG | + | chr1.2:50668456-50668475 | MS.gene30874:CDS | 50.0% | |
| AAGGCTGCTCCTCTTGTTCT+AGG | + | chr1.2:50669990-50670009 | MS.gene30874:CDS | 50.0% | |
| ACACTCACCAAGACCATCTC+TGG | - | chr1.2:50668744-50668763 | None:intergenic | 50.0% | |
| ACCAACTTCTTTGGTCGAGC+AGG | + | chr1.2:50672690-50672709 | MS.gene30874:CDS | 50.0% | |
| ACCGACATATGCGAAGGCAA+TGG | + | chr1.2:50668864-50668883 | MS.gene30874:CDS | 50.0% | |
| ACCTGCTCGACCAAAGAAGT+TGG | - | chr1.2:50672694-50672713 | None:intergenic | 50.0% | |
| AGATGCTAGTTCGTCACTGG+AGG | + | chr1.2:50669124-50669143 | MS.gene30874:CDS | 50.0% | |
| AGGAGGCGGATGAGGATAAA+GGG | + | chr1.2:50668457-50668476 | MS.gene30874:CDS | 50.0% | |
| ATTTCATCTAGGTCCGGCTG+AGG | + | chr1.2:50668839-50668858 | MS.gene30874:CDS | 50.0% | |
| CACCAAGACCATCTCTGGAT+GGG | - | chr1.2:50668739-50668758 | None:intergenic | 50.0% | |
| CCAGATGTCCAGTCCTTTAG+GGG | + | chr1.2:50671992-50672011 | MS.gene30874:intron | 50.0% | |
| CCATCCCTGGAATATTCCAC+AGG | - | chr1.2:50670065-50670084 | None:intergenic | 50.0% | |
| CCTGTGGAATATTCCAGGGA+TGG | + | chr1.2:50670062-50670081 | MS.gene30874:CDS | 50.0% | |
| CTCCAGATGTCCAGTCCTTT+AGG | + | chr1.2:50671990-50672009 | MS.gene30874:intron | 50.0% | |
| CTCGGAATCAGAGCAGAATG+AGG | + | chr1.2:50668791-50668810 | MS.gene30874:CDS | 50.0% | |
| CTTCTCGAATTTCGACCTCC+AGG | - | chr1.2:50669070-50669089 | None:intergenic | 50.0% | |
| GATCCCTGAGTACTCGATGT+TGG | - | chr1.2:50670236-50670255 | None:intergenic | 50.0% | |
| GATGAAGAGGATTCGTCGGT+TGG | + | chr1.2:50668582-50668601 | MS.gene30874:CDS | 50.0% | |
| GATTCCGTCCTTTGAATCCG+AGG | - | chr1.2:50668609-50668628 | None:intergenic | 50.0% | |
| GCAGCCATTCCTAGAACAAG+AGG | - | chr1.2:50670002-50670021 | None:intergenic | 50.0% | |
| GCCGAAAGATGCAATTCCTG+TGG | + | chr1.2:50670046-50670065 | MS.gene30874:CDS | 50.0% | |
| GCCGGACCTAGATGAAATTG+AGG | - | chr1.2:50668837-50668856 | None:intergenic | 50.0% | |
| GGCCAGCGACTGATGATAAA+TGG | + | chr1.2:50671620-50671639 | MS.gene30874:intron | 50.0% | |
| TAGTTCCGGCGAAACTGCTT+GGG | + | chr1.2:50668893-50668912 | MS.gene30874:CDS | 50.0% | |
| TCACCAAGACCATCTCTGGA+TGG | - | chr1.2:50668740-50668759 | None:intergenic | 50.0% | |
| TCGAGAAGATCTTTCGCAGC+AGG | + | chr1.2:50669082-50669101 | MS.gene30874:CDS | 50.0% | |
| TGCTCGACCAAAGAAGTTGG+TGG | - | chr1.2:50672691-50672710 | None:intergenic | 50.0% | |
| TTAGTTCCGGCGAAACTGCT+TGG | + | chr1.2:50668892-50668911 | MS.gene30874:CDS | 50.0% | |
| TTATGGCCACCAGAAGAAGC+AGG | - | chr1.2:50669422-50669441 | None:intergenic | 50.0% | |
| TTCCCATCCAGAGATGGTCT+TGG | + | chr1.2:50668734-50668753 | MS.gene30874:CDS | 50.0% | |
| ! | AGGGGTGTGTGTTAAGACTC+CGG | + | chr1.2:50672010-50672029 | MS.gene30874:intron | 50.0% |
| ! | TTTTGTGAAGGAGGCGGATG+AGG | + | chr1.2:50668449-50668468 | MS.gene30874:CDS | 50.0% |
| !! | AGAGAATTCTGTCGACTCGC+AGG | + | chr1.2:50668710-50668729 | MS.gene30874:CDS | 50.0% |
| !! | AGTATCGGTGTCGCATTGTC+TGG | - | chr1.2:50668967-50668986 | None:intergenic | 50.0% |
| !! | CATTCTGGTTTGGGTAAGCC+CGG | + | chr1.2:50669692-50669711 | MS.gene30874:CDS | 50.0% |
| !! | GAGAATTCTGTCGACTCGCA+GGG | + | chr1.2:50668711-50668730 | MS.gene30874:CDS | 50.0% |
| !! | GTATCGGTGTCGCATTGTCT+GGG | - | chr1.2:50668966-50668985 | None:intergenic | 50.0% |
| !! | TTTCGGATTCTGGGGTGCTT+CGG | + | chr1.2:50668553-50668572 | MS.gene30874:CDS | 50.0% |
| !!! | ATTTTTGGTCCCCGTTCGGA+TGG | + | chr1.2:50672228-50672247 | MS.gene30874:intron | 50.0% |
| !!! | CGGGGAGGCTTATTTTGTGA+AGG | + | chr1.2:50668437-50668456 | MS.gene30874:CDS | 50.0% |
| AGCCCATCGAATATCGGCAG+AGG | + | chr1.2:50669887-50669906 | MS.gene30874:CDS | 55.0% | |
| CAAAGTCTCCATCTGCGTCC+AGG | - | chr1.2:50670107-50670126 | None:intergenic | 55.0% | |
| CATATGTCGGTCTCCTCAGC+CGG | - | chr1.2:50668855-50668874 | None:intergenic | 55.0% | |
| CCCCTAAAGGACTGGACATC+TGG | - | chr1.2:50671995-50672014 | None:intergenic | 55.0% | |
| CGGGCTTACCCAAACCAGAA+TGG | - | chr1.2:50669694-50669713 | None:intergenic | 55.0% | |
| CTGGACGCAGATGGAGACTT+TGG | + | chr1.2:50670105-50670124 | MS.gene30874:CDS | 55.0% | |
| CTTCTCAGCACAGGGCTTAC+CGG | - | chr1.2:50669714-50669733 | None:intergenic | 55.0% | |
| GAAGATCTTTCGCAGCAGGC+TGG | + | chr1.2:50669086-50669105 | MS.gene30874:CDS | 55.0% | |
| GAGGAGACCGACATATGCGA+AGG | + | chr1.2:50668858-50668877 | MS.gene30874:CDS | 55.0% | |
| GATCAACAATCACCCTCGCC+TGG | + | chr1.2:50670086-50670105 | MS.gene30874:CDS | 55.0% | |
| GGACACAATCTGGTGTGGCA+AGG | + | chr1.2:50670783-50670802 | MS.gene30874:CDS | 55.0% | |
| GGAGGCGGATGAGGATAAAG+GGG | + | chr1.2:50668458-50668477 | MS.gene30874:CDS | 55.0% | |
| GGATTGGAGATCTCCCTCTG+TGG | + | chr1.2:50669813-50669832 | MS.gene30874:intron | 55.0% | |
| GTGTGTTAAGACTCCGGCGT+TGG | + | chr1.2:50672016-50672035 | MS.gene30874:intron | 55.0% | |
| TGGGCCTCGGATTCAAAGGA+CGG | + | chr1.2:50668602-50668621 | MS.gene30874:CDS | 55.0% | |
| TTCTCAGCACAGGGCTTACC+GGG | - | chr1.2:50669713-50669732 | None:intergenic | 55.0% | |
| ! | ATGGGTTTGGTAGCTGCTGC+TGG | + | chr1.2:50669855-50669874 | MS.gene30874:CDS | 55.0% |
| !! | TCCACTTGCTTTGGGGGGTA+GGG | + | chr1.2:50671477-50671496 | MS.gene30874:intron | 55.0% |
| !! | TTCCACTTGCTTTGGGGGGT+AGG | + | chr1.2:50671476-50671495 | MS.gene30874:intron | 55.0% |
| ACCCTACCCCCCAAAGCAAG+TGG | - | chr1.2:50671481-50671500 | None:intergenic | 60.0% | |
| CGGTTGGGCCTCGGATTCAA+AGG | + | chr1.2:50668598-50668617 | MS.gene30874:CDS | 60.0% | |
| GAGTGCGCGTGCAATTGTCC+AGG | + | chr1.2:50671215-50671234 | MS.gene30874:CDS | 60.0% | |
| GCAGGGTTCCCATCCAGAGA+TGG | + | chr1.2:50668728-50668747 | MS.gene30874:CDS | 60.0% | |
| ! | AGGATTCGTCGGTTGGGCCT+CGG | + | chr1.2:50668589-50668608 | MS.gene30874:CDS | 60.0% |
| AGCGGCCCAAGCAGTTTCGC+CGG | - | chr1.2:50668901-50668920 | None:intergenic | 65.0% | |
| CTCCATCTGCGTCCAGGCGA+GGG | - | chr1.2:50670101-50670120 | None:intergenic | 65.0% | |
| TCTCCATCTGCGTCCAGGCG+AGG | - | chr1.2:50670102-50670121 | None:intergenic | 65.0% | |
| CACCCTCGCCTGGACGCAGA+TGG | + | chr1.2:50670096-50670115 | MS.gene30874:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 50668192 | 50672857 | 50668192 | ID=MS.gene30874 |
| chr1.2 | mRNA | 50668192 | 50672857 | 50668192 | ID=MS.gene30874.t1;Parent=MS.gene30874 |
| chr1.2 | exon | 50668192 | 50669713 | 50668192 | ID=MS.gene30874.t1.exon1;Parent=MS.gene30874.t1 |
| chr1.2 | CDS | 50668192 | 50669713 | 50668192 | ID=cds.MS.gene30874.t1;Parent=MS.gene30874.t1 |
| chr1.2 | exon | 50669814 | 50670379 | 50669814 | ID=MS.gene30874.t1.exon2;Parent=MS.gene30874.t1 |
| chr1.2 | CDS | 50669814 | 50670379 | 50669814 | ID=cds.MS.gene30874.t1;Parent=MS.gene30874.t1 |
| chr1.2 | exon | 50670478 | 50670551 | 50670478 | ID=MS.gene30874.t1.exon3;Parent=MS.gene30874.t1 |
| chr1.2 | CDS | 50670478 | 50670551 | 50670478 | ID=cds.MS.gene30874.t1;Parent=MS.gene30874.t1 |
| chr1.2 | exon | 50670739 | 50670823 | 50670739 | ID=MS.gene30874.t1.exon4;Parent=MS.gene30874.t1 |
| chr1.2 | CDS | 50670739 | 50670823 | 50670739 | ID=cds.MS.gene30874.t1;Parent=MS.gene30874.t1 |
| chr1.2 | exon | 50671189 | 50671275 | 50671189 | ID=MS.gene30874.t1.exon5;Parent=MS.gene30874.t1 |
| chr1.2 | CDS | 50671189 | 50671275 | 50671189 | ID=cds.MS.gene30874.t1;Parent=MS.gene30874.t1 |
| chr1.2 | exon | 50671347 | 50671419 | 50671347 | ID=MS.gene30874.t1.exon6;Parent=MS.gene30874.t1 |
| chr1.2 | CDS | 50671347 | 50671419 | 50671347 | ID=cds.MS.gene30874.t1;Parent=MS.gene30874.t1 |
| chr1.2 | exon | 50672254 | 50672297 | 50672254 | ID=MS.gene30874.t1.exon7;Parent=MS.gene30874.t1 |
| chr1.2 | CDS | 50672254 | 50672297 | 50672254 | ID=cds.MS.gene30874.t1;Parent=MS.gene30874.t1 |
| chr1.2 | exon | 50672398 | 50672526 | 50672398 | ID=MS.gene30874.t1.exon8;Parent=MS.gene30874.t1 |
| chr1.2 | CDS | 50672398 | 50672526 | 50672398 | ID=cds.MS.gene30874.t1;Parent=MS.gene30874.t1 |
| chr1.2 | exon | 50672613 | 50672711 | 50672613 | ID=MS.gene30874.t1.exon9;Parent=MS.gene30874.t1 |
| chr1.2 | CDS | 50672613 | 50672711 | 50672613 | ID=cds.MS.gene30874.t1;Parent=MS.gene30874.t1 |
| chr1.2 | exon | 50672804 | 50672857 | 50672804 | ID=MS.gene30874.t1.exon10;Parent=MS.gene30874.t1 |
| chr1.2 | CDS | 50672804 | 50672857 | 50672804 | ID=cds.MS.gene30874.t1;Parent=MS.gene30874.t1 |
| Gene Sequence |
| Protein sequence |
