Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30893.t1 | XP_013468260.1 | 96.7 | 361 | 11 | 1 | 1 | 360 | 1 | 361 | 3.40E-148 | 534.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30893.t1 | Q0JHZ2 | 80.1 | 361 | 68 | 2 | 1 | 357 | 1 | 361 | 6.6e-116 | 418.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30893.t1 | A0A072VKH3 | 96.7 | 361 | 11 | 1 | 1 | 360 | 1 | 361 | 2.5e-148 | 534.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene30893.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013382 | MS.gene30893 | PPI |
| MS.gene049359 | MS.gene30893 | PPI |
| MS.gene06479 | MS.gene30893 | PPI |
| MS.gene31037 | MS.gene30893 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30893.t1 | MTR_1g067020 | 99.446 | 361 | 1 | 1 | 1 | 360 | 1 | 361 | 0.0 | 731 |
| MS.gene30893.t1 | MTR_6g078970 | 50.000 | 120 | 18 | 3 | 184 | 303 | 5 | 82 | 1.64e-23 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30893.t1 | AT2G20280 | 72.776 | 371 | 88 | 6 | 1 | 360 | 1 | 369 | 1.45e-160 | 454 |
Find 77 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTCCTGGCTCCTTAATT+TGG | 0.131430 | 1.2:+50454300 | None:intergenic |
| TTCAACAACCTTCTGCTTCT+TGG | 0.227516 | 1.2:+50458728 | None:intergenic |
| ATCTTGTTTGGGATCGGTTC+TGG | 0.237299 | 1.2:+50458623 | None:intergenic |
| TAATACCTTTGCATCTTGTT+TGG | 0.261505 | 1.2:+50458611 | None:intergenic |
| TGCCTGTTGGGCAGCCAAAC+TGG | 0.270781 | 1.2:+50456774 | None:intergenic |
| CTTAATTTGGATTGATGTCT+TGG | 0.282985 | 1.2:+50454313 | None:intergenic |
| ACCACCTGTTGCTGAGGTGC+TGG | 0.284681 | 1.2:+50454421 | None:intergenic |
| CAAGACATCAATCCAAATTA+AGG | 0.287429 | 1.2:-50454312 | MS.gene30893:CDS |
| CATCAGGTTCTGGTTCTCTT+TGG | 0.299666 | 1.2:+50456457 | None:intergenic |
| TGTTCAGTTTCATCAGGTTC+TGG | 0.302433 | 1.2:+50456447 | None:intergenic |
| GGAAGCAATATGGTTGGTTT+TGG | 0.321181 | 1.2:-50457098 | MS.gene30893:CDS |
| CCAAATGAAGGCTTTGTTAG+AGG | 0.323021 | 1.2:-50457007 | MS.gene30893:CDS |
| CCTCTAACAAAGCCTTCATT+TGG | 0.329335 | 1.2:+50457007 | None:intergenic |
| AATACCTTTGCATCTTGTTT+GGG | 0.345954 | 1.2:+50458612 | None:intergenic |
| ATACAATTCTTACCACCATT+TGG | 0.368919 | 1.2:+50457069 | None:intergenic |
| TGCCAGTTTGGCTGCCCAAC+AGG | 0.370933 | 1.2:-50456776 | MS.gene30893:CDS |
| TAGAACAACTCAGTAGTTAT+AGG | 0.372615 | 1.2:+50456832 | None:intergenic |
| CTTAGCCCTCTCTGCCTGTT+GGG | 0.378571 | 1.2:+50456762 | None:intergenic |
| TGATTACCAGGTGGGACTTT+AGG | 0.387712 | 1.2:+50457930 | None:intergenic |
| ACTGGGAGTGCTGCTAATAA+TGG | 0.388945 | 1.2:-50454446 | MS.gene30893:CDS |
| GTCCAATGCTAGCTTGTTTG+TGG | 0.394012 | 1.2:-50456505 | MS.gene30893:CDS |
| TGACGACGACGATGATGAAT+TGG | 0.394183 | 1.2:-50454372 | MS.gene30893:CDS |
| CAGGATTAAGCTTCAGCTCC+TGG | 0.399587 | 1.2:+50454287 | None:intergenic |
| GGATCCATCTTCAGGGGACT+GGG | 0.402542 | 1.2:-50454463 | MS.gene30893:intron |
| TCTTGTTTGGGATCGGTTCT+GGG | 0.408315 | 1.2:+50458624 | None:intergenic |
| CTCTAACAAAGCCTTCATTT+GGG | 0.418201 | 1.2:+50457008 | None:intergenic |
| TCTTAGCCCTCTCTGCCTGT+TGG | 0.422157 | 1.2:+50456761 | None:intergenic |
| GGACGAGAGAGATGCCAGTT+TGG | 0.425678 | 1.2:-50456788 | MS.gene30893:CDS |
| GTTGTTGAAGACAAAACTTT+CGG | 0.429860 | 1.2:-50458714 | MS.gene30893:CDS |
| ACATTCTGTTCAGTTTCATC+AGG | 0.434153 | 1.2:+50456441 | None:intergenic |
| CCACCTGTTGCTGAGGTGCT+GGG | 0.434200 | 1.2:+50454422 | None:intergenic |
| ATTTGAATGTTCAGAGGAAA+GGG | 0.439404 | 1.2:-50457550 | MS.gene30893:CDS |
| GGTCCCAGCACCTCAGCAAC+AGG | 0.448016 | 1.2:-50454425 | MS.gene30893:CDS |
| CTTTGCATCTTGTTTGGGAT+CGG | 0.453264 | 1.2:+50458617 | None:intergenic |
| TGGATCCATCTTCAGGGGAC+TGG | 0.464578 | 1.2:-50454464 | MS.gene30893:intron |
| ATCGTCGTCGTCAATGTCAT+CGG | 0.466901 | 1.2:+50454382 | None:intergenic |
| CGACGATGATGAATTGGACT+TGG | 0.483319 | 1.2:-50454366 | MS.gene30893:CDS |
| GGGATCGGTTCTGGGTTGAA+CGG | 0.484565 | 1.2:+50458632 | None:intergenic |
| CTACTGAGTTGTTCTATCAA+TGG | 0.484577 | 1.2:-50456825 | MS.gene30893:CDS |
| CTTGGACGAGTTGAATGAAC+TGG | 0.496577 | 1.2:-50454348 | MS.gene30893:CDS |
| TGAGGAGGAGATTGAAAAGC+AGG | 0.498835 | 1.2:-50456962 | MS.gene30893:intron |
| TAAAGTGGGTCAGTGTGCTA+AGG | 0.499067 | 1.2:-50457597 | MS.gene30893:CDS |
| GGGCTAAGAATGACCGTATG+AGG | 0.510546 | 1.2:-50456747 | MS.gene30893:intron |
| GCGGTAGAGAGGAAGCAATA+TGG | 0.516289 | 1.2:-50457108 | MS.gene30893:CDS |
| AAAGTGGGTCAGTGTGCTAA+GGG | 0.517849 | 1.2:-50457596 | MS.gene30893:CDS |
| AACTCGCATAATACGGACTT+GGG | 0.519493 | 1.2:+50457623 | None:intergenic |
| TGTTCTAAAATCCCAAATGA+AGG | 0.519608 | 1.2:-50457019 | MS.gene30893:CDS |
| ATAAATCATACAATATCTGT+TGG | 0.520423 | 1.2:+50457327 | None:intergenic |
| TCGTCGTCGTCAATGTCATC+GGG | 0.524494 | 1.2:+50454383 | None:intergenic |
| GGCTGCCCAACAGGCAGAGA+GGG | 0.524561 | 1.2:-50456767 | MS.gene30893:CDS |
| GATTTGAATGTTCAGAGGAA+AGG | 0.525852 | 1.2:-50457551 | MS.gene30893:CDS |
| TCAAGAGACATTGGAGAAAG+TGG | 0.526557 | 1.2:-50457385 | MS.gene30893:CDS |
| CTCATGATTTGAATGTTCAG+AGG | 0.535502 | 1.2:-50457556 | MS.gene30893:CDS |
| TCAATCCAAATTAAGGAGCC+AGG | 0.536632 | 1.2:-50454305 | MS.gene30893:CDS |
| GATAATGAACATACCTCATA+CGG | 0.540126 | 1.2:+50456734 | None:intergenic |
| AAACTCGCATAATACGGACT+TGG | 0.543376 | 1.2:+50457622 | None:intergenic |
| TATAGACATGCACTTCCACC+TGG | 0.544388 | 1.2:-50457045 | MS.gene30893:CDS |
| ATCCACAAACAAGCTAGCAT+TGG | 0.551369 | 1.2:+50456503 | None:intergenic |
| GGAAGAGAAGGCAAAAGAGA+AGG | 0.553385 | 1.2:-50457988 | MS.gene30893:CDS |
| ATCTGATAAAATGCCAATTG+AGG | 0.553676 | 1.2:-50456980 | MS.gene30893:CDS |
| TGTTAGATACAATGGAAGAG+TGG | 0.555431 | 1.2:-50457410 | MS.gene30893:intron |
| GTTAGATACAATGGAAGAGT+GGG | 0.563771 | 1.2:-50457409 | MS.gene30893:intron |
| TCTTATGTTGTTAGATACAA+TGG | 0.573310 | 1.2:-50457418 | MS.gene30893:intron |
| GTCTGCACCACCTGTTGCTG+AGG | 0.573436 | 1.2:+50454415 | None:intergenic |
| AGAGTGGGATCAAGAGACAT+TGG | 0.578286 | 1.2:-50457394 | MS.gene30893:CDS |
| ATCGGTTCTGGGTTGAACGG+AGG | 0.580401 | 1.2:+50458635 | None:intergenic |
| TAGAGAGGAAGCAATATGGT+TGG | 0.597838 | 1.2:-50457104 | MS.gene30893:CDS |
| CGATCCCAAACAAGATGCAA+AGG | 0.603297 | 1.2:-50458616 | MS.gene30893:intron |
| TGATAAAATGCCAATTGAGG+AGG | 0.604474 | 1.2:-50456977 | MS.gene30893:CDS |
| AATGAAAATGATTACCAGGT+GGG | 0.607119 | 1.2:+50457922 | None:intergenic |
| TTTGAATGTTCAGAGGAAAG+GGG | 0.609926 | 1.2:-50457549 | MS.gene30893:CDS |
| CCCAGCACCTCAGCAACAGG+TGG | 0.619651 | 1.2:-50454422 | MS.gene30893:CDS |
| TGATGTAGCCAAGAAGCAGA+AGG | 0.627538 | 1.2:-50458736 | MS.gene30893:CDS |
| AGAGACATTGGAGAAAGTGG+TGG | 0.637831 | 1.2:-50457382 | MS.gene30893:CDS |
| TACAGTGATAAGCGTGACGA+TGG | 0.639061 | 1.2:-50457512 | MS.gene30893:intron |
| TGGCTGCCCAACAGGCAGAG+AGG | 0.639365 | 1.2:-50456768 | MS.gene30893:CDS |
| AGTCAGCCTAAAGTCCCACC+TGG | 0.657066 | 1.2:-50457936 | MS.gene30893:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAGAAAAAAATAGATTT+TGG | - | chr1.2:50457010-50457029 | MS.gene30893:CDS | 10.0% |
| !! | AAAAAAAAAAGAAAGAGAAA+AGG | + | chr1.2:50458361-50458380 | None:intergenic | 15.0% |
| !! | ATTTAGGAAAACAAAATATA+TGG | + | chr1.2:50458565-50458584 | None:intergenic | 15.0% |
| !! | TAATCTACAATAAAAGAATA+TGG | + | chr1.2:50454491-50454510 | None:intergenic | 15.0% |
| !! | TTATTGTAGATTATTCAAAT+GGG | - | chr1.2:50454498-50454517 | MS.gene30893:intron | 15.0% |
| !! | TTTATTGTAGATTATTCAAA+TGG | - | chr1.2:50454497-50454516 | MS.gene30893:intron | 15.0% |
| !!! | AAATGATTTTTTTAGCAAAA+TGG | - | chr1.2:50457070-50457089 | MS.gene30893:CDS | 15.0% |
| !!! | TAATATATCTGAATTTTGTT+AGG | - | chr1.2:50455398-50455417 | MS.gene30893:intron | 15.0% |
| !!! | TTTTTAAAGTGTATTACAAA+TGG | - | chr1.2:50456439-50456458 | MS.gene30893:intron | 15.0% |
| !!! | TTTTTTTTACTCATAACAAA+TGG | - | chr1.2:50457334-50457353 | MS.gene30893:intron | 15.0% |
| !! | AAAAAAAATCCAAAACAAAC+AGG | - | chr1.2:50457166-50457185 | MS.gene30893:intron | 20.0% |
| !! | AAAACCAAAAAGTAAGAAAA+AGG | + | chr1.2:50455611-50455630 | None:intergenic | 20.0% |
| !! | AAATTTAACAGTTGCAAATT+TGG | - | chr1.2:50456734-50456753 | MS.gene30893:intron | 20.0% |
| !! | AATAAAAGAGGAAAATGATT+TGG | + | chr1.2:50458246-50458265 | None:intergenic | 20.0% |
| !! | ATAAATCATACAATATCTGT+TGG | + | chr1.2:50455727-50455746 | None:intergenic | 20.0% |
| !! | GTATGATTTATTAGATTTGT+TGG | - | chr1.2:50455736-50455755 | MS.gene30893:intron | 20.0% |
| !! | TTCTAACATATTATGTAACA+TGG | - | chr1.2:50456167-50456186 | MS.gene30893:intron | 20.0% |
| !! | TTTAAAAAACTCGCATAATA+CGG | + | chr1.2:50455438-50455457 | None:intergenic | 20.0% |
| !! | TTTATTCTTGCTTATTCAAA+TGG | - | chr1.2:50455865-50455884 | MS.gene30893:intron | 20.0% |
| !! | TTTGGGAGAAAAAATTTAAA+GGG | + | chr1.2:50458323-50458342 | None:intergenic | 20.0% |
| !!! | AGTAAAAAAAACATTTGCTA+TGG | + | chr1.2:50457325-50457344 | None:intergenic | 20.0% |
| !!! | AGTTTTTGAAATTCAATTGA+AGG | + | chr1.2:50458438-50458457 | None:intergenic | 20.0% |
| !!! | ATTATATAGATTTTTCAACC+GGG | - | chr1.2:50454735-50454754 | MS.gene30893:intron | 20.0% |
| !!! | ATTTTTTTCTGTAGTTCAAT+GGG | - | chr1.2:50455348-50455367 | MS.gene30893:intron | 20.0% |
| !!! | CATTATATAGATTTTTCAAC+CGG | - | chr1.2:50454734-50454753 | MS.gene30893:intron | 20.0% |
| !!! | CTTTTTGCATATAAAAAGAA+AGG | + | chr1.2:50457873-50457892 | None:intergenic | 20.0% |
| !!! | GTAAAAAAAACATTTGCTAT+GGG | + | chr1.2:50457324-50457343 | None:intergenic | 20.0% |
| !!! | TATCCACTTTCATTTTTTTA+TGG | - | chr1.2:50455787-50455806 | MS.gene30893:intron | 20.0% |
| !!! | TATTTTGTTTTCCTAAATGT+TGG | - | chr1.2:50458567-50458586 | MS.gene30893:intron | 20.0% |
| !!! | TATTTTTTTCTGTAGTTCAA+TGG | - | chr1.2:50455347-50455366 | MS.gene30893:intron | 20.0% |
| !!! | TCTATTTTTTTCTTAATGCA+AGG | + | chr1.2:50457007-50457026 | None:intergenic | 20.0% |
| !!! | TTCTAGTTTTATGCAATTAT+GGG | - | chr1.2:50456828-50456847 | MS.gene30893:CDS | 20.0% |
| !!! | TTTCTAGTTTTATGCAATTA+TGG | - | chr1.2:50456827-50456846 | MS.gene30893:CDS | 20.0% |
| ! | AACCAAAAAGCAAATTTGAA+GGG | + | chr1.2:50457201-50457220 | None:intergenic | 25.0% |
| ! | ACACAAATTCATAAAACAAC+TGG | + | chr1.2:50457482-50457501 | None:intergenic | 25.0% |
| ! | ACAGCATCATAACAAAAAAA+TGG | + | chr1.2:50456789-50456808 | None:intergenic | 25.0% |
| ! | AGGAGTTCAAAAAATGTATT+AGG | - | chr1.2:50458190-50458209 | MS.gene30893:intron | 25.0% |
| ! | CAAAAACTAGAAAGCAATAT+AGG | - | chr1.2:50458450-50458469 | MS.gene30893:intron | 25.0% |
| ! | CCAATAAAACATAACAGATT+AGG | + | chr1.2:50455026-50455045 | None:intergenic | 25.0% |
| ! | GAAGATAATACAACATGATT+AGG | + | chr1.2:50456498-50456517 | None:intergenic | 25.0% |
| ! | GAGTTCAAAAAATGTATTAG+GGG | - | chr1.2:50458192-50458211 | MS.gene30893:intron | 25.0% |
| ! | GCAAATTATTCTAATAGACA+TGG | - | chr1.2:50457980-50457999 | MS.gene30893:CDS | 25.0% |
| ! | GGAGTTCAAAAAATGTATTA+GGG | - | chr1.2:50458191-50458210 | MS.gene30893:intron | 25.0% |
| ! | GTTTGGGAGAAAAAATTTAA+AGG | + | chr1.2:50458324-50458343 | None:intergenic | 25.0% |
| ! | TAACAAAAAAATGGCAGTTA+TGG | + | chr1.2:50456780-50456799 | None:intergenic | 25.0% |
| ! | TAACAATGAAAATGATTACC+AGG | + | chr1.2:50455136-50455155 | None:intergenic | 25.0% |
| ! | TAATAAGAGCCTTTATTGAT+TGG | + | chr1.2:50454708-50454727 | None:intergenic | 25.0% |
| ! | TAGCCATAAAAAAATGAAAG+TGG | + | chr1.2:50455793-50455812 | None:intergenic | 25.0% |
| ! | TATTATCTTCTTAAATGCAG+TGG | - | chr1.2:50456508-50456527 | MS.gene30893:CDS | 25.0% |
| ! | TCAATGGAAGAAGAAAAAAA+TGG | - | chr1.2:50456242-50456261 | MS.gene30893:intron | 25.0% |
| ! | TCTTATGTTGTTAGATACAA+TGG | - | chr1.2:50455633-50455652 | MS.gene30893:intron | 25.0% |
| ! | TGCAAAAGGACTTATATTTA+GGG | + | chr1.2:50457682-50457701 | None:intergenic | 25.0% |
| ! | TGGAAAATTGGAAAATTTGA+AGG | - | chr1.2:50456754-50456773 | MS.gene30893:CDS | 25.0% |
| ! | TTGCAAAAGGACTTATATTT+AGG | + | chr1.2:50457683-50457702 | None:intergenic | 25.0% |
| ! | TTTATATTATTCAGTGTTGC+TGG | - | chr1.2:50455371-50455390 | MS.gene30893:intron | 25.0% |
| !! | AAAAGTACATAAACAACGTA+CGG | + | chr1.2:50455900-50455919 | None:intergenic | 25.0% |
| !! | ACACATCTTTAGATTTTGTT+TGG | - | chr1.2:50458079-50458098 | MS.gene30893:intron | 25.0% |
| !! | ATTCAATTGAAGGATTTGTT+TGG | + | chr1.2:50458428-50458447 | None:intergenic | 25.0% |
| !! | CCTAATCTGTTATGTTTTAT+TGG | - | chr1.2:50455023-50455042 | MS.gene30893:intron | 25.0% |
| !! | GTATTGATAAAGGATGTATT+TGG | + | chr1.2:50457734-50457753 | None:intergenic | 25.0% |
| !! | TACGTTGTTTATGTACTTTT+AGG | - | chr1.2:50455900-50455919 | MS.gene30893:intron | 25.0% |
| !! | TTATTGGTAACAGAAAAAGA+AGG | - | chr1.2:50455039-50455058 | MS.gene30893:intron | 25.0% |
| !! | TTCAATTGAAGGATTTGTTT+GGG | + | chr1.2:50458427-50458446 | None:intergenic | 25.0% |
| !!! | AAATTTGCTTTTTGGTTCAT+TGG | - | chr1.2:50457204-50457223 | MS.gene30893:intron | 25.0% |
| !!! | AAATTTTTTCTCCCAAACAA+AGG | - | chr1.2:50458326-50458345 | MS.gene30893:intron | 25.0% |
| !!! | AATTGGTAGAGTATTGATAA+AGG | + | chr1.2:50457744-50457763 | None:intergenic | 25.0% |
| !!! | ATTATGCGAGTTTTTTAAAG+TGG | - | chr1.2:50455439-50455458 | MS.gene30893:intron | 25.0% |
| !!! | ATTTTTTGAACTCCTTCATA+TGG | + | chr1.2:50458185-50458204 | None:intergenic | 25.0% |
| !!! | ATTTTTTTATGGCTAATTCG+AGG | - | chr1.2:50455798-50455817 | MS.gene30893:intron | 25.0% |
| !!! | CACATCTTTAGATTTTGTTT+GGG | - | chr1.2:50458080-50458099 | MS.gene30893:intron | 25.0% |
| !!! | CTTTCCTTTTTCTTACTTTT+TGG | - | chr1.2:50455604-50455623 | MS.gene30893:intron | 25.0% |
| !!! | TAATTTTAATGGCTTTTCCA+TGG | - | chr1.2:50456658-50456677 | MS.gene30893:intron | 25.0% |
| !!! | TTATGCGAGTTTTTTAAAGT+GGG | - | chr1.2:50455440-50455459 | MS.gene30893:intron | 25.0% |
| !!! | TTTTTTGAACTCCTTCATAT+GGG | + | chr1.2:50458184-50458203 | None:intergenic | 25.0% |
| AATACTCTACCAATTTGTCT+TGG | - | chr1.2:50457749-50457768 | MS.gene30893:intron | 30.0% | |
| AATGAAAATGATTACCAGGT+GGG | + | chr1.2:50455132-50455151 | None:intergenic | 30.0% | |
| ACCAATTTGTCTTGGAAAAT+TGG | - | chr1.2:50457757-50457776 | MS.gene30893:intron | 30.0% | |
| AGGAAAAGGGAAATATTGAA+GGG | - | chr1.2:50456395-50456414 | MS.gene30893:intron | 30.0% | |
| ATACAATTCTTACCACCATT+TGG | + | chr1.2:50455985-50456004 | None:intergenic | 30.0% | |
| ATCTGATAAAATGCCAATTG+AGG | - | chr1.2:50456071-50456090 | MS.gene30893:intron | 30.0% | |
| ATTGGATCTTAGTTTAGACA+TGG | - | chr1.2:50457222-50457241 | MS.gene30893:intron | 30.0% | |
| ATTTGAATGTTCAGAGGAAA+GGG | - | chr1.2:50455501-50455520 | MS.gene30893:intron | 30.0% | |
| CAAGACATCAATCCAAATTA+AGG | - | chr1.2:50458739-50458758 | MS.gene30893:CDS | 30.0% | |
| CAGTTGCAAATTTGGAAAAT+TGG | - | chr1.2:50456742-50456761 | MS.gene30893:intron | 30.0% | |
| GAACCAAAAAGCAAATTTGA+AGG | + | chr1.2:50457202-50457221 | None:intergenic | 30.0% | |
| GAGAAAAAATTTAAAGGGAG+AGG | + | chr1.2:50458318-50458337 | None:intergenic | 30.0% | |
| GATAAAATCTGCAATATGAC+TGG | - | chr1.2:50456686-50456705 | MS.gene30893:intron | 30.0% | |
| GATAATGAACATACCTCATA+CGG | + | chr1.2:50456320-50456339 | None:intergenic | 30.0% | |
| GCAAAAGGACTTATATTTAG+GGG | + | chr1.2:50457681-50457700 | None:intergenic | 30.0% | |
| GTAATTAGTGTCTCATCTTT+AGG | - | chr1.2:50457423-50457442 | MS.gene30893:intron | 30.0% | |
| GTTGTTGAAGACAAAACTTT+CGG | - | chr1.2:50454337-50454356 | MS.gene30893:CDS | 30.0% | |
| GTTTAATTCTGATACACTGT+CGG | - | chr1.2:50455171-50455190 | MS.gene30893:intron | 30.0% | |
| TAATACCTTTGCATCTTGTT+TGG | + | chr1.2:50454443-50454462 | None:intergenic | 30.0% | |
| TAGAACAACTCAGTAGTTAT+AGG | + | chr1.2:50456222-50456241 | None:intergenic | 30.0% | |
| TCGAATAAGCCAATCAATAA+AGG | - | chr1.2:50454696-50454715 | MS.gene30893:intron | 30.0% | |
| TGTGCTTATAAACAAGAACT+AGG | + | chr1.2:50458041-50458060 | None:intergenic | 30.0% | |
| TGTGTCTAGAAATTTGCAAA+AGG | + | chr1.2:50457696-50457715 | None:intergenic | 30.0% | |
| TTATAGCTCAAAACATGAGA+AGG | + | chr1.2:50457378-50457397 | None:intergenic | 30.0% | |
| TTCAAAAAATGTATTAGGGG+AGG | - | chr1.2:50458195-50458214 | MS.gene30893:intron | 30.0% | |
| TTGCATAAAACTAGAAAAGC+AGG | + | chr1.2:50456824-50456843 | None:intergenic | 30.0% | |
| TTGGATCTTAGTTTAGACAT+GGG | - | chr1.2:50457223-50457242 | MS.gene30893:intron | 30.0% | |
| ! | AATACCTTTGCATCTTGTTT+GGG | + | chr1.2:50454442-50454461 | None:intergenic | 30.0% |
| ! | ACCAAATGAGTCTTATAAGT+AGG | + | chr1.2:50457647-50457666 | None:intergenic | 30.0% |
| ! | ACTCATAACAAATGGCTTTT+AGG | - | chr1.2:50457342-50457361 | MS.gene30893:CDS | 30.0% |
| ! | CCAAATGAGTCTTATAAGTA+GGG | + | chr1.2:50457646-50457665 | None:intergenic | 30.0% |
| ! | CTTAATTTGGATTGATGTCT+TGG | + | chr1.2:50458741-50458760 | None:intergenic | 30.0% |
| ! | GCAGATTTTATCTATATCCA+TGG | + | chr1.2:50456678-50456697 | None:intergenic | 30.0% |
| ! | GCGTCTCTTTGTAATTTTAA+TGG | - | chr1.2:50456647-50456666 | MS.gene30893:intron | 30.0% |
| ! | GTTTGTAACTTTTATGCATG+AGG | - | chr1.2:50457295-50457314 | MS.gene30893:intron | 30.0% |
| ! | TCCAATTTTCCAAGACAAAT+TGG | + | chr1.2:50457761-50457780 | None:intergenic | 30.0% |
| ! | TCCTTTTTAATCGAGGAAAA+GGG | - | chr1.2:50456382-50456401 | MS.gene30893:intron | 30.0% |
| ! | TTAGGTATGCAAACACTTTT+TGG | - | chr1.2:50455918-50455937 | MS.gene30893:intron | 30.0% |
| ! | TTTTCCTCGATTAAAAAGGA+GGG | + | chr1.2:50456382-50456401 | None:intergenic | 30.0% |
| !! | AATAGACATGGAATTTGTTG+TGG | - | chr1.2:50457992-50458011 | MS.gene30893:CDS | 30.0% |
| !! | AGAAGTTCACTTAGTTTGTA+AGG | - | chr1.2:50457939-50457958 | MS.gene30893:CDS | 30.0% |
| !! | TACCCTTCAAATTTGCTTTT+TGG | - | chr1.2:50457196-50457215 | MS.gene30893:intron | 30.0% |
| !! | TGTTCTAAAATCCCAAATGA+AGG | - | chr1.2:50456032-50456051 | MS.gene30893:intron | 30.0% |
| AAATGACGATGCTTCTTGTA+AGG | + | chr1.2:50456130-50456149 | None:intergenic | 35.0% | |
| AAATGTTGGATCCATCTTCA+GGG | - | chr1.2:50458581-50458600 | MS.gene30893:intron | 35.0% | |
| AAGGTAGGTGGTAAGTATAT+TGG | - | chr1.2:50457958-50457977 | MS.gene30893:CDS | 35.0% | |
| AAGTACCCTATTAATAGGGA+TGG | - | chr1.2:50457898-50457917 | MS.gene30893:intron | 35.0% | |
| AATCATTATCCCACTAAGAG+GGG | + | chr1.2:50458500-50458519 | None:intergenic | 35.0% | |
| AATGACGATGCTTCTTGTAA+GGG | + | chr1.2:50456129-50456148 | None:intergenic | 35.0% | |
| AATTATGGGTGCGTTTGTTT+CGG | - | chr1.2:50456842-50456861 | MS.gene30893:CDS | 35.0% | |
| ACAAGAGATTGTCCAAAACA+TGG | - | chr1.2:50457548-50457567 | MS.gene30893:CDS | 35.0% | |
| ACAAGCTGTTTATCCAAACA+GGG | + | chr1.2:50454537-50454556 | None:intergenic | 35.0% | |
| ACATTCTGTTCAGTTTCATC+AGG | + | chr1.2:50456613-50456632 | None:intergenic | 35.0% | |
| AGGAATTTCTCACCTTTGTT+TGG | + | chr1.2:50458341-50458360 | None:intergenic | 35.0% | |
| AGTGCAAGCTCAAAAGATAT+AGG | + | chr1.2:50457453-50457472 | None:intergenic | 35.0% | |
| ATTAAGCCGTTTATCCAAAC+AGG | + | chr1.2:50454775-50454794 | None:intergenic | 35.0% | |
| ATTGGGATTTATGGTGCAAA+TGG | - | chr1.2:50457268-50457287 | MS.gene30893:intron | 35.0% | |
| ATTGTCCAAAACATGGTTGA+GGG | - | chr1.2:50457555-50457574 | MS.gene30893:CDS | 35.0% | |
| CAATCATTATCCCACTAAGA+GGG | + | chr1.2:50458501-50458520 | None:intergenic | 35.0% | |
| CAATGAAAATGATTACCAGG+TGG | + | chr1.2:50455133-50455152 | None:intergenic | 35.0% | |
| CCAGTAACAATTGGGATTTA+TGG | - | chr1.2:50457259-50457278 | MS.gene30893:intron | 35.0% | |
| CCATAAATCCCAATTGTTAC+TGG | + | chr1.2:50457262-50457281 | None:intergenic | 35.0% | |
| CCCTACTTATAAGACTCATT+TGG | - | chr1.2:50457643-50457662 | MS.gene30893:intron | 35.0% | |
| CTACTGAGTTGTTCTATCAA+TGG | - | chr1.2:50456226-50456245 | MS.gene30893:intron | 35.0% | |
| CTCATGATTTGAATGTTCAG+AGG | - | chr1.2:50455495-50455514 | MS.gene30893:intron | 35.0% | |
| CTCTAACAAAGCCTTCATTT+GGG | + | chr1.2:50456046-50456065 | None:intergenic | 35.0% | |
| GAGGAAAAGGGAAATATTGA+AGG | - | chr1.2:50456394-50456413 | MS.gene30893:intron | 35.0% | |
| GATTTGAATGTTCAGAGGAA+AGG | - | chr1.2:50455500-50455519 | MS.gene30893:intron | 35.0% | |
| GGAAAAGGGAAATATTGAAG+GGG | - | chr1.2:50456396-50456415 | MS.gene30893:intron | 35.0% | |
| GTTAGATACAATGGAAGAGT+GGG | - | chr1.2:50455642-50455661 | MS.gene30893:intron | 35.0% | |
| TAAATGTTGGATCCATCTTC+AGG | - | chr1.2:50458580-50458599 | MS.gene30893:intron | 35.0% | |
| TCATATAAGCCAATCCAGAA+AGG | - | chr1.2:50454998-50455017 | MS.gene30893:intron | 35.0% | |
| TGAAGATGGATCCAACATTT+AGG | + | chr1.2:50458581-50458600 | None:intergenic | 35.0% | |
| TGATAAAATGCCAATTGAGG+AGG | - | chr1.2:50456074-50456093 | MS.gene30893:intron | 35.0% | |
| TGCTGTGTGATTATTGTGTA+TGG | - | chr1.2:50457599-50457618 | MS.gene30893:CDS | 35.0% | |
| TGGATCTTAGTTTAGACATG+GGG | - | chr1.2:50457224-50457243 | MS.gene30893:intron | 35.0% | |
| TGTTAGATACAATGGAAGAG+TGG | - | chr1.2:50455641-50455660 | MS.gene30893:intron | 35.0% | |
| TTAAGCCGTTTATCCAAACA+GGG | + | chr1.2:50454774-50454793 | None:intergenic | 35.0% | |
| TTGGGATTTATGGTGCAAAT+GGG | - | chr1.2:50457269-50457288 | MS.gene30893:intron | 35.0% | |
| TTTCCTCGATTAAAAAGGAG+GGG | + | chr1.2:50456381-50456400 | None:intergenic | 35.0% | |
| TTTGAATGTTCAGAGGAAAG+GGG | - | chr1.2:50455502-50455521 | MS.gene30893:intron | 35.0% | |
| TTTGGGAGTTAGGAAAAAGA+GGG | + | chr1.2:50458410-50458429 | None:intergenic | 35.0% | |
| TTTGTGTCTGAATTCCTGTT+TGG | - | chr1.2:50457495-50457514 | MS.gene30893:intron | 35.0% | |
| ! | AATGTATTAGGGGAGGATTT+TGG | - | chr1.2:50458202-50458221 | MS.gene30893:intron | 35.0% |
| ! | AGCAAATTTGAAGGGTACAT+AGG | + | chr1.2:50457193-50457212 | None:intergenic | 35.0% |
| ! | AGGAGTTGTAGTTTTCACTT+GGG | + | chr1.2:50456202-50456221 | None:intergenic | 35.0% |
| ! | ATTTTCCAAAGCCATGGTTT+TGG | + | chr1.2:50457525-50457544 | None:intergenic | 35.0% |
| ! | CTCCTTTTTAATCGAGGAAA+AGG | - | chr1.2:50456381-50456400 | MS.gene30893:intron | 35.0% |
| ! | CTTTTCCTCGATTAAAAAGG+AGG | + | chr1.2:50456383-50456402 | None:intergenic | 35.0% |
| ! | GCAAATTTGAAGGGTACATA+GGG | + | chr1.2:50457192-50457211 | None:intergenic | 35.0% |
| ! | GCCAAAGTACCCTATTAATA+GGG | - | chr1.2:50457894-50457913 | MS.gene30893:intron | 35.0% |
| ! | GGAATTTCTCACCTTTGTTT+GGG | + | chr1.2:50458340-50458359 | None:intergenic | 35.0% |
| ! | TAGGAGTTGTAGTTTTCACT+TGG | + | chr1.2:50456203-50456222 | None:intergenic | 35.0% |
| ! | TCCCTATTAATAGGGTACTT+TGG | + | chr1.2:50457898-50457917 | None:intergenic | 35.0% |
| ! | TCCCTTTTCCTCGATTAAAA+AGG | + | chr1.2:50456386-50456405 | None:intergenic | 35.0% |
| ! | TCGAGGCTTCTTTTTAATGT+TGG | - | chr1.2:50455815-50455834 | MS.gene30893:intron | 35.0% |
| ! | TGCCAAAGTACCCTATTAAT+AGG | - | chr1.2:50457893-50457912 | MS.gene30893:intron | 35.0% |
| ! | TTGGTAACAGAAAAAGAAGG+AGG | - | chr1.2:50455042-50455061 | MS.gene30893:intron | 35.0% |
| ! | TTTTCAATCTCCTCCTCAAT+TGG | + | chr1.2:50456087-50456106 | None:intergenic | 35.0% |
| ! | TTTTCCAAAGCCATGGTTTT+GGG | + | chr1.2:50457524-50457543 | None:intergenic | 35.0% |
| ! | TTTTTGCATGCGACAATGTA+TGG | - | chr1.2:50457399-50457418 | MS.gene30893:CDS | 35.0% |
| !! | AAAACCATGGCTTTGGAAAA+TGG | - | chr1.2:50457524-50457543 | MS.gene30893:CDS | 35.0% |
| !! | ACATCAGCTTTTGATTGCTT+CGG | + | chr1.2:50454301-50454320 | None:intergenic | 35.0% |
| !! | ATGCAAACACTTTTTGGATG+CGG | - | chr1.2:50455924-50455943 | MS.gene30893:intron | 35.0% |
| !! | CAGCATGTTTGTTTTCTGTT+AGG | + | chr1.2:50457584-50457603 | None:intergenic | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | - | chr1.2:50454586-50454605 | MS.gene30893:intron | 35.0% |
| !! | GTTCACTTAGTTTGTAAGGT+AGG | - | chr1.2:50457943-50457962 | MS.gene30893:CDS | 35.0% |
| !! | TAACAAATGGCTTTTAGGAG+TGG | - | chr1.2:50457347-50457366 | MS.gene30893:CDS | 35.0% |
| !! | TTAGATTTTGTTTGGGCGAA+AGG | - | chr1.2:50458087-50458106 | MS.gene30893:intron | 35.0% |
| !!! | GATTTTAGAACATATCCAGG+TGG | + | chr1.2:50456024-50456043 | None:intergenic | 35.0% |
| !!! | GTGTTTGCTTCTTGTTGTTT+TGG | - | chr1.2:50455572-50455591 | MS.gene30893:intron | 35.0% |
| !!! | TCTTGTTGTTTTGGTTCTGA+TGG | - | chr1.2:50455581-50455600 | MS.gene30893:intron | 35.0% |
| !!! | TGGGATTTTAGAACATATCC+AGG | + | chr1.2:50456027-50456046 | None:intergenic | 35.0% |
| AAAATTACAAAGAGACGCGC+TGG | + | chr1.2:50456645-50456664 | None:intergenic | 40.0% | |
| AAACTCGCATAATACGGACT+TGG | + | chr1.2:50455432-50455451 | None:intergenic | 40.0% | |
| AAATCCCAATTGTTACTGGC+TGG | + | chr1.2:50457258-50457277 | None:intergenic | 40.0% | |
| AAATTACAAAGAGACGCGCT+GGG | + | chr1.2:50456644-50456663 | None:intergenic | 40.0% | |
| AACTCGCATAATACGGACTT+GGG | + | chr1.2:50455431-50455450 | None:intergenic | 40.0% | |
| AAGGAAGGAAGGAAAATGGA+AGG | - | chr1.2:50458106-50458125 | MS.gene30893:intron | 40.0% | |
| AATGTTGGATCCATCTTCAG+GGG | - | chr1.2:50458582-50458601 | MS.gene30893:intron | 40.0% | |
| ACCCTATTAATAGGGATGGA+GGG | - | chr1.2:50457902-50457921 | MS.gene30893:intron | 40.0% | |
| AGGAAGGAAGGAAAATGGAA+GGG | - | chr1.2:50458107-50458126 | MS.gene30893:intron | 40.0% | |
| AGTACATAAACAACGTACGG+AGG | + | chr1.2:50455897-50455916 | None:intergenic | 40.0% | |
| ATCCACAAACAAGCTAGCAT+TGG | + | chr1.2:50456551-50456570 | None:intergenic | 40.0% | |
| ATGACGATGCTTCTTGTAAG+GGG | + | chr1.2:50456128-50456147 | None:intergenic | 40.0% | |
| CCAATCATTATCCCACTAAG+AGG | + | chr1.2:50458502-50458521 | None:intergenic | 40.0% | |
| CCTCTAACAAAGCCTTCATT+TGG | + | chr1.2:50456047-50456066 | None:intergenic | 40.0% | |
| CCTCTTAGTGGGATAATGAT+TGG | - | chr1.2:50458499-50458518 | MS.gene30893:intron | 40.0% | |
| CTTAGTGGGATAATGATTGG+TGG | - | chr1.2:50458502-50458521 | MS.gene30893:intron | 40.0% | |
| GAAAAAGAAGGAGGAAGAGA+AGG | - | chr1.2:50455051-50455070 | MS.gene30893:intron | 40.0% | |
| GACAAGCTGTTTATCCAAAC+AGG | + | chr1.2:50454538-50454557 | None:intergenic | 40.0% | |
| GATTGTCCAAAACATGGTTG+AGG | - | chr1.2:50457554-50457573 | MS.gene30893:CDS | 40.0% | |
| GTCTTATAAGTAGGGACACA+TGG | + | chr1.2:50457638-50457657 | None:intergenic | 40.0% | |
| GTTTGGGAGTTAGGAAAAAG+AGG | + | chr1.2:50458411-50458430 | None:intergenic | 40.0% | |
| TAACAGATTAGGAGCCTTTC+TGG | + | chr1.2:50455015-50455034 | None:intergenic | 40.0% | |
| TACCCTATTAATAGGGATGG+AGG | - | chr1.2:50457901-50457920 | MS.gene30893:intron | 40.0% | |
| TAGAGAGGAAGCAATATGGT+TGG | - | chr1.2:50455947-50455966 | MS.gene30893:intron | 40.0% | |
| TCAAGAGACATTGGAGAAAG+TGG | - | chr1.2:50455666-50455685 | MS.gene30893:intron | 40.0% | |
| TCAATCCAAATTAAGGAGCC+AGG | - | chr1.2:50458746-50458765 | MS.gene30893:CDS | 40.0% | |
| TCCCTCCATCCCTATTAATA+GGG | + | chr1.2:50457906-50457925 | None:intergenic | 40.0% | |
| TGTTCAGTTTCATCAGGTTC+TGG | + | chr1.2:50456607-50456626 | None:intergenic | 40.0% | |
| TTCAACAACCTTCTGCTTCT+TGG | + | chr1.2:50454326-50454345 | None:intergenic | 40.0% | |
| TTGAACTCCTTCATATGGGA+GGG | + | chr1.2:50458180-50458199 | None:intergenic | 40.0% | |
| TTGGGAGTTAGGAAAAAGAG+GGG | + | chr1.2:50458409-50458428 | None:intergenic | 40.0% | |
| TTTGAACTCCTTCATATGGG+AGG | + | chr1.2:50458181-50458200 | None:intergenic | 40.0% | |
| ! | CTTTGCATCTTGTTTGGGAT+CGG | + | chr1.2:50454437-50454456 | None:intergenic | 40.0% |
| ! | GAAGGATTTGTTTGGGAGTT+AGG | + | chr1.2:50458420-50458439 | None:intergenic | 40.0% |
| ! | GGATAATGATTGGTGGTTGT+TGG | - | chr1.2:50458509-50458528 | MS.gene30893:intron | 40.0% |
| ! | GTGCATGTCATTAGCTGTTT+TGG | - | chr1.2:50454928-50454947 | MS.gene30893:intron | 40.0% |
| ! | TACATAGGGCCTGTTTGTTT+TGG | + | chr1.2:50457178-50457197 | None:intergenic | 40.0% |
| ! | TATTAGGGGAGGATTTTGGA+GGG | - | chr1.2:50458206-50458225 | MS.gene30893:intron | 40.0% |
| ! | TGTACCATTTTCCAAAGCCA+TGG | + | chr1.2:50457531-50457550 | None:intergenic | 40.0% |
| ! | TGTTTGGAATCCCAAAACCA+TGG | - | chr1.2:50457511-50457530 | MS.gene30893:intron | 40.0% |
| ! | TTTTCTGCTTATGCCCTGTT+TGG | - | chr1.2:50454521-50454540 | MS.gene30893:intron | 40.0% |
| ! | TTTTGGTCATGTCCAAATGG+TGG | - | chr1.2:50455970-50455989 | MS.gene30893:intron | 40.0% |
| !! | ATTTTGTTTGGGCGAAAGGA+AGG | - | chr1.2:50458091-50458110 | MS.gene30893:intron | 40.0% |
| !! | CACTTAGTTTGTAAGGTAGG+TGG | - | chr1.2:50457946-50457965 | MS.gene30893:CDS | 40.0% |
| !! | CCAAATGAAGGCTTTGTTAG+AGG | - | chr1.2:50456044-50456063 | MS.gene30893:intron | 40.0% |
| !!! | ATGGTTTTGGGATTCCAAAC+AGG | + | chr1.2:50457512-50457531 | None:intergenic | 40.0% |
| !!! | GGAAGCAATATGGTTGGTTT+TGG | - | chr1.2:50455953-50455972 | MS.gene30893:intron | 40.0% |
| !!! | TGGTTTTGGTCATGTCCAAA+TGG | - | chr1.2:50455967-50455986 | MS.gene30893:intron | 40.0% |
| AAAGTGGGTCAGTGTGCTAA+GGG | - | chr1.2:50455455-50455474 | MS.gene30893:intron | 45.0% | |
| AAGGGATGATAACCCTTGCA+TGG | - | chr1.2:50458125-50458144 | MS.gene30893:intron | 45.0% | |
| ACTAAGACCCTCCCATATGA+AGG | - | chr1.2:50458170-50458189 | MS.gene30893:intron | 45.0% | |
| AGAGACATTGGAGAAAGTGG+TGG | - | chr1.2:50455669-50455688 | MS.gene30893:intron | 45.0% | |
| AGAGTGGGATCAAGAGACAT+TGG | - | chr1.2:50455657-50455676 | MS.gene30893:intron | 45.0% | |
| AGGGATGATAACCCTTGCAT+GGG | - | chr1.2:50458126-50458145 | MS.gene30893:intron | 45.0% | |
| ATCGTCGTCGTCAATGTCAT+CGG | + | chr1.2:50458672-50458691 | None:intergenic | 45.0% | |
| ATGGGAGGGTCTTAGTTTCA+TGG | + | chr1.2:50458166-50458185 | None:intergenic | 45.0% | |
| CATGCCAGCCAGTAACAATT+GGG | - | chr1.2:50457251-50457270 | MS.gene30893:intron | 45.0% | |
| CGACGATGATGAATTGGACT+TGG | - | chr1.2:50458685-50458704 | MS.gene30893:CDS | 45.0% | |
| CGATCCCAAACAAGATGCAA+AGG | - | chr1.2:50454435-50454454 | MS.gene30893:CDS | 45.0% | |
| CTCCCTCCATCCCTATTAAT+AGG | + | chr1.2:50457907-50457926 | None:intergenic | 45.0% | |
| GAATCCCAAAACCATGGCTT+TGG | - | chr1.2:50457517-50457536 | MS.gene30893:CDS | 45.0% | |
| GATTAGGAGCCTTTCTGGAT+TGG | + | chr1.2:50455010-50455029 | None:intergenic | 45.0% | |
| GCGAAAGGAAGGAAGGAAAA+TGG | - | chr1.2:50458102-50458121 | MS.gene30893:intron | 45.0% | |
| GGAAGAGAAGGCAAAAGAGA+AGG | - | chr1.2:50455063-50455082 | MS.gene30893:intron | 45.0% | |
| GTAGGCCCTGTTTGGATAAA+CGG | - | chr1.2:50454766-50454785 | MS.gene30893:intron | 45.0% | |
| TAAAGTGGGTCAGTGTGCTA+AGG | - | chr1.2:50455454-50455473 | MS.gene30893:intron | 45.0% | |
| TACAGTGATAAGCGTGACGA+TGG | - | chr1.2:50455539-50455558 | MS.gene30893:intron | 45.0% | |
| TATAGACATGCACTTCCACC+TGG | - | chr1.2:50456006-50456025 | MS.gene30893:intron | 45.0% | |
| TGACGACGACGATGATGAAT+TGG | - | chr1.2:50458679-50458698 | MS.gene30893:CDS | 45.0% | |
| TGAGGAGGAGATTGAAAAGC+AGG | - | chr1.2:50456089-50456108 | MS.gene30893:intron | 45.0% | |
| TGATGTAGCCAAGAAGCAGA+AGG | - | chr1.2:50454315-50454334 | MS.gene30893:CDS | 45.0% | |
| TGATTACCAGGTGGGACTTT+AGG | + | chr1.2:50455124-50455143 | None:intergenic | 45.0% | |
| TGGGAGTTAGGAAAAAGAGG+GGG | + | chr1.2:50458408-50458427 | None:intergenic | 45.0% | |
| TTAGGAAAAAGAGGGGGGAA+GGG | + | chr1.2:50458402-50458421 | None:intergenic | 45.0% | |
| ! | AATTGTTACTGGCTGGCATG+GGG | + | chr1.2:50457251-50457270 | None:intergenic | 45.0% |
| ! | ACTTTTTGGATGCGGTAGAG+AGG | - | chr1.2:50455932-50455951 | MS.gene30893:intron | 45.0% |
| ! | ATCTTGTTTGGGATCGGTTC+TGG | + | chr1.2:50454431-50454450 | None:intergenic | 45.0% |
| ! | CAATTGTTACTGGCTGGCAT+GGG | + | chr1.2:50457252-50457271 | None:intergenic | 45.0% |
| ! | CTTGGACGAGTTGAATGAAC+TGG | - | chr1.2:50458703-50458722 | MS.gene30893:CDS | 45.0% |
| ! | GGAATCCCTCAACCATGTTT+TGG | + | chr1.2:50457563-50457582 | None:intergenic | 45.0% |
| ! | GTATTAGGGGAGGATTTTGG+AGG | - | chr1.2:50458205-50458224 | MS.gene30893:intron | 45.0% |
| ! | TAGCCCCTCCTTTTTAATCG+AGG | - | chr1.2:50456375-50456394 | MS.gene30893:intron | 45.0% |
| ! | TCTTGTTTGGGATCGGTTCT+GGG | + | chr1.2:50454430-50454449 | None:intergenic | 45.0% |
| !! | ACTGGGAGTGCTGCTAATAA+TGG | - | chr1.2:50458605-50458624 | MS.gene30893:intron | 45.0% |
| !! | CATCAGGTTCTGGTTCTCTT+TGG | + | chr1.2:50456597-50456616 | None:intergenic | 45.0% |
| !! | GTCCAATGCTAGCTTGTTTG+TGG | - | chr1.2:50456546-50456565 | MS.gene30893:intron | 45.0% |
| !! | TCAGCTTTTGATTGCTTCGG+AGG | + | chr1.2:50454298-50454317 | None:intergenic | 45.0% |
| !! | ATAAATATTATAAATAAAAG+AGG | + | chr1.2:50458258-50458277 | None:intergenic | 5.0% |
| AAGAACAAACCCCCCATGCA+AGG | + | chr1.2:50458141-50458160 | None:intergenic | 50.0% | |
| AGAACAAACCCCCCATGCAA+GGG | + | chr1.2:50458140-50458159 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCTCTTAG+TGG | - | chr1.2:50458487-50458506 | MS.gene30893:intron | 50.0% | |
| CAGCTCCTGGCTCCTTAATT+TGG | + | chr1.2:50458754-50458773 | None:intergenic | 50.0% | |
| CCATGCCAGCCAGTAACAAT+TGG | - | chr1.2:50457250-50457269 | MS.gene30893:intron | 50.0% | |
| GATGATAACCCTTGCATGGG+GGG | - | chr1.2:50458129-50458148 | MS.gene30893:intron | 50.0% | |
| GCGGTAGAGAGGAAGCAATA+TGG | - | chr1.2:50455943-50455962 | MS.gene30893:intron | 50.0% | |
| GGATGATAACCCTTGCATGG+GGG | - | chr1.2:50458128-50458147 | MS.gene30893:intron | 50.0% | |
| GGGAGTTAGGAAAAAGAGGG+GGG | + | chr1.2:50458407-50458426 | None:intergenic | 50.0% | |
| GGGATGATAACCCTTGCATG+GGG | - | chr1.2:50458127-50458146 | MS.gene30893:intron | 50.0% | |
| GGGCTAAGAATGACCGTATG+AGG | - | chr1.2:50456304-50456323 | MS.gene30893:intron | 50.0% | |
| GTTAGGAAAAAGAGGGGGGA+AGG | + | chr1.2:50458403-50458422 | None:intergenic | 50.0% | |
| TCGTCGTCGTCAATGTCATC+GGG | + | chr1.2:50458671-50458690 | None:intergenic | 50.0% | |
| TGTAGCTGACCCCTCTTAGT+GGG | - | chr1.2:50458488-50458507 | MS.gene30893:intron | 50.0% | |
| TGTTTGGGCGAAAGGAAGGA+AGG | - | chr1.2:50458095-50458114 | MS.gene30893:intron | 50.0% | |
| ! | CCAATTGTTACTGGCTGGCA+TGG | + | chr1.2:50457253-50457272 | None:intergenic | 50.0% |
| ! | TTCAACCGGGTTTTCTGCGT+AGG | - | chr1.2:50454748-50454767 | MS.gene30893:intron | 50.0% |
| ! | TTTTCTGCGTAGGCCCTGTT+TGG | - | chr1.2:50454758-50454777 | MS.gene30893:intron | 50.0% |
| !!! | TGAAGGGGCTGCGTGTTTTT+TGG | - | chr1.2:50456411-50456430 | MS.gene30893:intron | 50.0% |
| AGTCAGCCTAAAGTCCCACC+TGG | - | chr1.2:50455115-50455134 | MS.gene30893:intron | 55.0% | |
| CTTAGCCCTCTCTGCCTGTT+GGG | + | chr1.2:50456292-50456311 | None:intergenic | 55.0% | |
| GGACGAGAGAGATGCCAGTT+TGG | - | chr1.2:50456263-50456282 | MS.gene30893:intron | 55.0% | |
| GGATCCATCTTCAGGGGACT+GGG | - | chr1.2:50458588-50458607 | MS.gene30893:intron | 55.0% | |
| TCTTAGCCCTCTCTGCCTGT+TGG | + | chr1.2:50456293-50456312 | None:intergenic | 55.0% | |
| TGGATCCATCTTCAGGGGAC+TGG | - | chr1.2:50458587-50458606 | MS.gene30893:intron | 55.0% | |
| !! | ATCGGTTCTGGGTTGAACGG+AGG | + | chr1.2:50454419-50454438 | None:intergenic | 55.0% |
| !! | GGGATCGGTTCTGGGTTGAA+CGG | + | chr1.2:50454422-50454441 | None:intergenic | 55.0% |
| AAGAGGGGGGAAGGGTAGTG+AGG | + | chr1.2:50458394-50458413 | None:intergenic | 60.0% | |
| ACCACCTGTTGCTGAGGTGC+TGG | + | chr1.2:50458633-50458652 | None:intergenic | 60.0% | |
| AGAGGGGGGAAGGGTAGTGA+GGG | + | chr1.2:50458393-50458412 | None:intergenic | 60.0% | |
| CACTCCCAGTCCCCTGAAGA+TGG | + | chr1.2:50458595-50458614 | None:intergenic | 60.0% | |
| CAGGGCCTACGCAGAAAACC+CGG | + | chr1.2:50454756-50454775 | None:intergenic | 60.0% | |
| GTCTGCACCACCTGTTGCTG+AGG | + | chr1.2:50458639-50458658 | None:intergenic | 60.0% | |
| TGCCAGTTTGGCTGCCCAAC+AGG | - | chr1.2:50456275-50456294 | MS.gene30893:intron | 60.0% | |
| TGCCTGTTGGGCAGCCAAAC+TGG | + | chr1.2:50456280-50456299 | None:intergenic | 60.0% | |
| ! | CCACCTGTTGCTGAGGTGCT+GGG | + | chr1.2:50458632-50458651 | None:intergenic | 60.0% |
| CCCAGCACCTCAGCAACAGG+TGG | - | chr1.2:50458629-50458648 | MS.gene30893:CDS | 65.0% | |
| GGCTGCCCAACAGGCAGAGA+GGG | - | chr1.2:50456284-50456303 | MS.gene30893:intron | 65.0% | |
| GGGGAAGGGTAGTGAGGGAG+GGG | + | chr1.2:50458388-50458407 | None:intergenic | 65.0% | |
| GGGGGAAGGGTAGTGAGGGA+GGG | + | chr1.2:50458389-50458408 | None:intergenic | 65.0% | |
| GGTCCCAGCACCTCAGCAAC+AGG | - | chr1.2:50458626-50458645 | MS.gene30893:CDS | 65.0% | |
| TGGCTGCCCAACAGGCAGAG+AGG | - | chr1.2:50456283-50456302 | MS.gene30893:intron | 65.0% | |
| GGGGGGAAGGGTAGTGAGGG+AGG | + | chr1.2:50458390-50458409 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 50454292 | 50458781 | 50454292 | ID=MS.gene30893 |
| chr1.2 | mRNA | 50454292 | 50458781 | 50454292 | ID=MS.gene30893.t1;Parent=MS.gene30893 |
| chr1.2 | exon | 50458617 | 50458781 | 50458617 | ID=MS.gene30893.t1.exon1;Parent=MS.gene30893.t1 |
| chr1.2 | CDS | 50458617 | 50458781 | 50458617 | ID=cds.MS.gene30893.t1;Parent=MS.gene30893.t1 |
| chr1.2 | exon | 50457937 | 50458021 | 50457937 | ID=MS.gene30893.t1.exon2;Parent=MS.gene30893.t1 |
| chr1.2 | CDS | 50457937 | 50458021 | 50457937 | ID=cds.MS.gene30893.t1;Parent=MS.gene30893.t1 |
| chr1.2 | exon | 50457513 | 50457653 | 50457513 | ID=MS.gene30893.t1.exon3;Parent=MS.gene30893.t1 |
| chr1.2 | CDS | 50457513 | 50457653 | 50457513 | ID=cds.MS.gene30893.t1;Parent=MS.gene30893.t1 |
| chr1.2 | exon | 50457338 | 50457426 | 50457338 | ID=MS.gene30893.t1.exon4;Parent=MS.gene30893.t1 |
| chr1.2 | CDS | 50457338 | 50457426 | 50457338 | ID=cds.MS.gene30893.t1;Parent=MS.gene30893.t1 |
| chr1.2 | exon | 50456963 | 50457151 | 50456963 | ID=MS.gene30893.t1.exon5;Parent=MS.gene30893.t1 |
| chr1.2 | CDS | 50456963 | 50457151 | 50456963 | ID=cds.MS.gene30893.t1;Parent=MS.gene30893.t1 |
| chr1.2 | exon | 50456748 | 50456878 | 50456748 | ID=MS.gene30893.t1.exon6;Parent=MS.gene30893.t1 |
| chr1.2 | CDS | 50456748 | 50456878 | 50456748 | ID=cds.MS.gene30893.t1;Parent=MS.gene30893.t1 |
| chr1.2 | exon | 50456443 | 50456545 | 50456443 | ID=MS.gene30893.t1.exon7;Parent=MS.gene30893.t1 |
| chr1.2 | CDS | 50456443 | 50456545 | 50456443 | ID=cds.MS.gene30893.t1;Parent=MS.gene30893.t1 |
| chr1.2 | exon | 50454292 | 50454471 | 50454292 | ID=MS.gene30893.t1.exon8;Parent=MS.gene30893.t1 |
| chr1.2 | CDS | 50454292 | 50454471 | 50454292 | ID=cds.MS.gene30893.t1;Parent=MS.gene30893.t1 |
| Gene Sequence |
| Protein sequence |
