Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31058.t1 | XP_013461539.1 | 97.5 | 601 | 14 | 1 | 1 | 601 | 3 | 602 | 0.00E+00 | 1135.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31058.t1 | Q9SRK7 | 80.1 | 549 | 109 | 0 | 21 | 569 | 19 | 567 | 1.2e-255 | 883.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31058.t1 | A0A072V0M1 | 97.5 | 601 | 14 | 1 | 1 | 601 | 3 | 602 | 0.0e+00 | 1135.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049377 | MS.gene31058 | 0.916954 | 9.56E-86 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31058 | MS.gene98272 | PPI |
| MS.gene31058 | MS.gene022431 | PPI |
| MS.gene31058 | MS.gene35464 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31058.t1 | MTR_3g094320 | 97.504 | 601 | 14 | 1 | 1 | 601 | 3 | 602 | 0.0 | 1194 |
| MS.gene31058.t1 | MTR_3g075120 | 49.470 | 566 | 239 | 7 | 20 | 582 | 18 | 539 | 2.04e-175 | 508 |
| MS.gene31058.t1 | MTR_7g072600 | 80.263 | 76 | 15 | 0 | 205 | 280 | 18 | 93 | 1.35e-31 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31058.t1 | AT3G10960 | 79.249 | 559 | 114 | 1 | 13 | 569 | 9 | 567 | 0.0 | 928 |
| MS.gene31058.t1 | AT5G50300 | 52.390 | 523 | 209 | 6 | 24 | 546 | 16 | 498 | 0.0 | 525 |
| MS.gene31058.t1 | AT5G50300 | 52.490 | 522 | 208 | 6 | 25 | 546 | 34 | 515 | 0.0 | 525 |
Find 184 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACATTGTGTTGAATATT+TGG | 0.076406 | 3.3:+78521209 | MS.gene31058:CDS |
| CTTCCAGGTGGAACGGTTTC+TGG | 0.122948 | 3.3:+78520428 | MS.gene31058:CDS |
| TTGACGTATTCTATTGCTTA+TGG | 0.169383 | 3.3:+78521166 | MS.gene31058:CDS |
| TCGATTCCGGCTTGGGCTAT+TGG | 0.191352 | 3.3:+78521034 | MS.gene31058:CDS |
| TCTATTGCTTATGGGCTTAT+TGG | 0.196928 | 3.3:+78521175 | MS.gene31058:CDS |
| GAAGAATTATTAGCACTATT+TGG | 0.227427 | 3.3:-78521289 | None:intergenic |
| GCGGCATAGCCCGGGTTAAC+AGG | 0.231130 | 3.3:-78519945 | None:intergenic |
| TGGGCTTGGTGGGCTGGAAG+TGG | 0.265248 | 3.3:-78519630 | None:intergenic |
| TTTGTGTGGGCTTGGTGGGC+TGG | 0.270309 | 3.3:-78519636 | None:intergenic |
| AGTTGTAGTGCTTTAGCATT+TGG | 0.276034 | 3.3:-78521367 | None:intergenic |
| GGCTTGGTGGGCTGGAAGTG+GGG | 0.285194 | 3.3:-78519628 | None:intergenic |
| TGACGTATTCTATTGCTTAT+GGG | 0.291944 | 3.3:+78521167 | MS.gene31058:CDS |
| CCTCATTGGTTGCTTCATCA+TGG | 0.302903 | 3.3:+78520019 | MS.gene31058:CDS |
| TACACCGTCGTGGGCTTTCA+TGG | 0.307316 | 3.3:+78520104 | MS.gene31058:CDS |
| GGGCTTGGTGGGCTGGAAGT+GGG | 0.307342 | 3.3:-78519629 | None:intergenic |
| ACACTCTGGTTGGGCCTTGT+GGG | 0.309150 | 3.3:+78520488 | MS.gene31058:CDS |
| TTAGCACTATTTGGCTCCTT+TGG | 0.309880 | 3.3:-78521280 | None:intergenic |
| ACCGTGGCTTCTTCCCTCAT+TGG | 0.312133 | 3.3:+78520005 | MS.gene31058:CDS |
| GAGCTTATTCTAACGGGCTT+TGG | 0.315835 | 3.3:-78520236 | None:intergenic |
| GGGCTTTGTGTGGGCTTGGT+GGG | 0.322247 | 3.3:-78519640 | None:intergenic |
| GCAAATTTGCATGAGATATC+AGG | 0.323440 | 3.3:-78519921 | None:intergenic |
| GTTGGCTTCGATTCCGGCTT+GGG | 0.351004 | 3.3:+78521027 | MS.gene31058:CDS |
| TGGGCTTTGTGTGGGCTTGG+TGG | 0.351560 | 3.3:-78519641 | None:intergenic |
| ATTGTGGTGGGGTCGTTGTT+AGG | 0.353079 | 3.3:+78520884 | MS.gene31058:CDS |
| GCTTGGTGGGCTGGAAGTGG+GGG | 0.354232 | 3.3:-78519627 | None:intergenic |
| CTCATTGGTTGCTTCATCAT+GGG | 0.356545 | 3.3:+78520020 | MS.gene31058:CDS |
| GAATCACCGGCGGCGGTGTT+AGG | 0.356687 | 3.3:-78520623 | None:intergenic |
| TTTAGGCCTTGCTCCAGGTA+TGG | 0.357659 | 3.3:+78520061 | MS.gene31058:CDS |
| ACCGTTGTTGGCTTCGATTC+CGG | 0.363246 | 3.3:+78521021 | MS.gene31058:CDS |
| AACACTCTGGTTGGGCCTTG+TGG | 0.368956 | 3.3:+78520487 | MS.gene31058:CDS |
| GTAAACTAACGGTTCCGTTA+AGG | 0.370350 | 3.3:-78520406 | None:intergenic |
| TGTGTTGAATATTTGGGATT+GGG | 0.370811 | 3.3:+78521216 | MS.gene31058:CDS |
| GACTCAATAAACGCCGTTAC+CGG | 0.371162 | 3.3:-78520914 | None:intergenic |
| TATGGGCTTATTGGTGGGAT+TGG | 0.373153 | 3.3:+78521184 | MS.gene31058:CDS |
| TAAACTAACGGTTCCGTTAA+GGG | 0.373233 | 3.3:-78520405 | None:intergenic |
| TTACATTGTGTTGAATATTT+GGG | 0.373652 | 3.3:+78521210 | MS.gene31058:CDS |
| TGTTGGCTTCGATTCCGGCT+TGG | 0.388698 | 3.3:+78521026 | MS.gene31058:CDS |
| AGCCGTTCCGGCACGGAGTT+CGG | 0.388894 | 3.3:-78519745 | None:intergenic |
| CTTCTCAATCTCAAGTCAAT+GGG | 0.395869 | 3.3:+78521308 | MS.gene31058:CDS |
| GACAGGAACGTTGTATTCTA+TGG | 0.398225 | 3.3:+78520784 | MS.gene31058:CDS |
| TTAGGCCTTGCTCCAGGTAT+GGG | 0.400907 | 3.3:+78520062 | MS.gene31058:CDS |
| TTCTTACTCATTTCATCAGT+CGG | 0.402497 | 3.3:+78520185 | MS.gene31058:CDS |
| TTGCGACGATCAAGTCTTTA+CGG | 0.404816 | 3.3:-78519983 | None:intergenic |
| GTGTTGAATATTTGGGATTG+GGG | 0.406876 | 3.3:+78521217 | MS.gene31058:CDS |
| CAAGGCCCAACCAGAGTGTT+GGG | 0.421403 | 3.3:-78520484 | None:intergenic |
| AGATGGGCTTTGTGTGGGCT+TGG | 0.423297 | 3.3:-78519644 | None:intergenic |
| CCGTTAAGGGCGGTTATAAC+CGG | 0.427393 | 3.3:-78520392 | None:intergenic |
| TATTCTATGGCAAGGTTCGC+AGG | 0.427768 | 3.3:+78520797 | MS.gene31058:CDS |
| TCTTCTCAATCTCAAGTCAA+TGG | 0.428375 | 3.3:+78521307 | MS.gene31058:CDS |
| GCCTCCATTCTAACTGATTC+CGG | 0.430705 | 3.3:+78519804 | MS.gene31058:CDS |
| TTGTGTTGAATATTTGGGAT+TGG | 0.433005 | 3.3:+78521215 | MS.gene31058:CDS |
| AGTTAGAATGGAGGCGTTGA+CGG | 0.433565 | 3.3:-78519796 | None:intergenic |
| ATCAAGGTATCGGGCTCGTT+GGG | 0.436910 | 3.3:+78520306 | MS.gene31058:CDS |
| GATCAGTGGTGGAGATTGAT+TGG | 0.437552 | 3.3:+78521092 | MS.gene31058:CDS |
| GCGTTTATTGAGTCTTCAAC+GGG | 0.437581 | 3.3:+78520923 | MS.gene31058:CDS |
| CAAATTTGCCCCTGTTAACC+CGG | 0.439914 | 3.3:+78519935 | MS.gene31058:CDS |
| TTGCTTATGGGCTTATTGGT+GGG | 0.440354 | 3.3:+78521179 | MS.gene31058:CDS |
| TCAAGACAAGCGGCATAGCC+CGG | 0.441522 | 3.3:-78519954 | None:intergenic |
| ATTGCTTATGGGCTTATTGG+TGG | 0.443433 | 3.3:+78521178 | MS.gene31058:CDS |
| TAAGCGTTTGAGCCCATACC+TGG | 0.449378 | 3.3:-78520074 | None:intergenic |
| TACCTGGAGCAAGGCCTAAA+GGG | 0.453864 | 3.3:-78520058 | None:intergenic |
| GCAGGTTTCACCGACGAAAA+CGG | 0.454776 | 3.3:+78520815 | MS.gene31058:CDS |
| AACGGGGATAACGGCGTTGA+CGG | 0.457237 | 3.3:+78520964 | MS.gene31058:CDS |
| TAAGCTCCTCCGCCGGTATC+GGG | 0.458576 | 3.3:+78520252 | MS.gene31058:CDS |
| ATAAGCTCCTCCGCCGGTAT+CGG | 0.462080 | 3.3:+78520251 | MS.gene31058:CDS |
| AGTTTGAGGTAGAGATGGAT+GGG | 0.464799 | 3.3:-78519869 | None:intergenic |
| TGTTGGGCTGGTACAGTTTG+AGG | 0.466130 | 3.3:-78519883 | None:intergenic |
| GATAACGGCGTTGACGGTGG+CGG | 0.470469 | 3.3:+78520970 | MS.gene31058:CDS |
| GCGGAGGAGCTTATTCTAAC+GGG | 0.470882 | 3.3:-78520242 | None:intergenic |
| CTTCAAAACAATCAAGGTAT+CGG | 0.473008 | 3.3:+78520296 | MS.gene31058:CDS |
| TGCGACGATCAAGTCTTTAC+GGG | 0.473171 | 3.3:-78519982 | None:intergenic |
| GGAACCGTTAGTTTACTTCC+AGG | 0.476049 | 3.3:+78520413 | MS.gene31058:CDS |
| GAAAGCCCAACACTCTGGTT+GGG | 0.477055 | 3.3:+78520479 | MS.gene31058:CDS |
| ATCGGGCTTCAAAACAATCA+AGG | 0.478586 | 3.3:+78520290 | MS.gene31058:CDS |
| AAGAAGCCCGTGATGAGCTT+GGG | 0.478670 | 3.3:-78520364 | None:intergenic |
| GGTGAGGAAAGTAGCCGTTC+CGG | 0.483396 | 3.3:-78519757 | None:intergenic |
| CTCCCTTTAGGCCTTGCTCC+AGG | 0.484772 | 3.3:+78520056 | MS.gene31058:CDS |
| CGGCATAGCCCGGGTTAACA+GGG | 0.484866 | 3.3:-78519944 | None:intergenic |
| TACTTTGCTTACACCGTCGT+GGG | 0.484912 | 3.3:+78520095 | MS.gene31058:CDS |
| TTCAAAACAATCAAGGTATC+GGG | 0.488455 | 3.3:+78520297 | MS.gene31058:CDS |
| AAAGAAGCCCGTGATGAGCT+TGG | 0.488675 | 3.3:-78520365 | None:intergenic |
| GATGCCACGTCGATTGTGGT+GGG | 0.494246 | 3.3:+78520872 | MS.gene31058:CDS |
| CAGTTTGAGGTAGAGATGGA+TGG | 0.494890 | 3.3:-78519870 | None:intergenic |
| ATAACGGCGTTGACGGTGGC+GGG | 0.500012 | 3.3:+78520971 | MS.gene31058:CDS |
| CCGGTTATAACCGCCCTTAA+CGG | 0.501073 | 3.3:+78520392 | MS.gene31058:CDS |
| ACAAGGCCCAACCAGAGTGT+TGG | 0.502515 | 3.3:-78520485 | None:intergenic |
| AATCAAGGTATCGGGCTCGT+TGG | 0.506621 | 3.3:+78520305 | MS.gene31058:CDS |
| ATACCTGGAGCAAGGCCTAA+AGG | 0.511435 | 3.3:-78520059 | None:intergenic |
| GGAAAGCCCAACACTCTGGT+TGG | 0.517673 | 3.3:+78520478 | MS.gene31058:CDS |
| AAACTGCTGCGAGTGCGCTT+TGG | 0.520672 | 3.3:-78520145 | None:intergenic |
| GTCGTGGGCTTTCATGGCTC+CGG | 0.521893 | 3.3:+78520110 | MS.gene31058:CDS |
| GTGGTTGCCCAAGCTCATCA+CGG | 0.526556 | 3.3:+78520357 | MS.gene31058:CDS |
| GGTGAAAGTGGAGTTACGTT+GGG | 0.530487 | 3.3:-78519721 | None:intergenic |
| AAAACTTAACGCACCTGCTG+TGG | 0.535615 | 3.3:-78520693 | None:intergenic |
| TCCGCCGGAATCAGTTAGAA+TGG | 0.535814 | 3.3:-78519808 | None:intergenic |
| GTTAGGAACTTCACCGGTAA+CGG | 0.535923 | 3.3:+78520901 | MS.gene31058:CDS |
| TGGTTGCCCAAGCTCATCAC+GGG | 0.536796 | 3.3:+78520358 | MS.gene31058:CDS |
| GTGGACATTCTCGACACGAC+AGG | 0.538088 | 3.3:+78520767 | MS.gene31058:CDS |
| CAAGACAAGCGGCATAGCCC+GGG | 0.539731 | 3.3:-78519953 | None:intergenic |
| ACGGAGTTCGGTGGTGAAAG+TGG | 0.539970 | 3.3:-78519733 | None:intergenic |
| ATCACGGGCTTCTTTAGCGC+CGG | 0.540803 | 3.3:+78520373 | MS.gene31058:CDS |
| GAATGGAAAGCCCAACACTC+TGG | 0.545342 | 3.3:+78520474 | MS.gene31058:CDS |
| CACCGAACTCCGTGCCGGAA+CGG | 0.546674 | 3.3:+78519743 | MS.gene31058:CDS |
| ATCAGTGGTGGAGATTGATT+GGG | 0.550445 | 3.3:+78521093 | MS.gene31058:CDS |
| ATACTCATGAGCTGAATCAC+CGG | 0.551717 | 3.3:-78520636 | None:intergenic |
| GTCGGATGCCACGTCGATTG+TGG | 0.557591 | 3.3:+78520868 | MS.gene31058:CDS |
| TTACTTTGCTTACACCGTCG+TGG | 0.560920 | 3.3:+78520094 | MS.gene31058:CDS |
| AGCGAGAGATGGGCTTTGTG+TGG | 0.561400 | 3.3:-78519650 | None:intergenic |
| TTCAACGGGGATAAGAGAAG+GGG | 0.564344 | 3.3:+78520937 | MS.gene31058:CDS |
| TGAACAGAGAGGGACACAAT+CGG | 0.566224 | 3.3:-78519844 | None:intergenic |
| GGCGTTTATTGAGTCTTCAA+CGG | 0.566505 | 3.3:+78520922 | MS.gene31058:CDS |
| TAGTTTACTTCCAGGTGGAA+CGG | 0.566620 | 3.3:+78520421 | MS.gene31058:CDS |
| TCACCAGAAACCGTTCCACC+TGG | 0.568299 | 3.3:-78520431 | None:intergenic |
| GTCGTTGTTAGGAACTTCAC+CGG | 0.568498 | 3.3:+78520895 | MS.gene31058:CDS |
| AGCTCATGAGTATTTCAAGA+AGG | 0.569434 | 3.3:+78520646 | MS.gene31058:CDS |
| GGCTGAATGAGATGAAGTGT+TGG | 0.571605 | 3.3:-78519900 | None:intergenic |
| ATGAGCTGAATCACCGGCGG+CGG | 0.573355 | 3.3:-78520630 | None:intergenic |
| CATGATGAAGCAACCAATGA+GGG | 0.573818 | 3.3:-78520018 | None:intergenic |
| TAGGTGTTGAAGCGAGAGAT+GGG | 0.574642 | 3.3:-78519660 | None:intergenic |
| TGTTGAATATTTGGGATTGG+GGG | 0.574721 | 3.3:+78521218 | MS.gene31058:CDS |
| GGTACAGTTTGAGGTAGAGA+TGG | 0.575479 | 3.3:-78519874 | None:intergenic |
| GTAGGTGTTGAAGCGAGAGA+TGG | 0.577020 | 3.3:-78519661 | None:intergenic |
| TTGGGCTTTCCATTCTATCA+CGG | 0.579130 | 3.3:-78520466 | None:intergenic |
| GCGTTTCCTAACACCGCCGC+CGG | 0.580860 | 3.3:+78520617 | MS.gene31058:CDS |
| TTCACCACCGAACTCCGTGC+CGG | 0.584018 | 3.3:+78519738 | MS.gene31058:CDS |
| TTTGATGATGAGATCAGTGG+TGG | 0.585140 | 3.3:+78521081 | MS.gene31058:CDS |
| GCGAGAGATGGGCTTTGTGT+GGG | 0.587534 | 3.3:-78519649 | None:intergenic |
| GTGAAAGGAGCAATGATCTA+CGG | 0.592507 | 3.3:+78520545 | MS.gene31058:CDS |
| GGGGATAACGGCGTTGACGG+TGG | 0.593326 | 3.3:+78520967 | MS.gene31058:CDS |
| GGATGCCACGTCGATTGTGG+TGG | 0.594421 | 3.3:+78520871 | MS.gene31058:CDS |
| TACGTAGCTAAAACAAGACT+AGG | 0.594536 | 3.3:+78519681 | MS.gene31058:CDS |
| AATGAGATGAAGTGTTGGGC+TGG | 0.595201 | 3.3:-78519895 | None:intergenic |
| GCTGAATGAGATGAAGTGTT+GGG | 0.596055 | 3.3:-78519899 | None:intergenic |
| ACCAATGAGGGAAGAAGCCA+CGG | 0.598545 | 3.3:-78520006 | None:intergenic |
| CTTCAACGGGGATAAGAGAA+GGG | 0.601128 | 3.3:+78520936 | MS.gene31058:CDS |
| TTGAGCCCATACCTGGAGCA+AGG | 0.601157 | 3.3:-78520067 | None:intergenic |
| TCTTCAACGGGGATAAGAGA+AGG | 0.601843 | 3.3:+78520935 | MS.gene31058:CDS |
| GGCGGAGGAGCTTATTCTAA+CGG | 0.607380 | 3.3:-78520243 | None:intergenic |
| ACCACCGAGTGTGACTAAAG+TGG | 0.607913 | 3.3:-78520339 | None:intergenic |
| AACGGCTACTTTCCTCACCA+TGG | 0.608652 | 3.3:+78519761 | MS.gene31058:CDS |
| GAATGGAGGCGTTGACGGCG+AGG | 0.609867 | 3.3:-78519791 | None:intergenic |
| AAATTTGCCCCTGTTAACCC+GGG | 0.610985 | 3.3:+78519936 | MS.gene31058:CDS |
| TAAGCAATAGAATACGTCAA+AGG | 0.613028 | 3.3:-78521163 | None:intergenic |
| TGGTGAAAGTGGAGTTACGT+TGG | 0.613545 | 3.3:-78519722 | None:intergenic |
| GGAAAGTAGCCGTTCCGGCA+CGG | 0.613745 | 3.3:-78519752 | None:intergenic |
| GGAAACAGAGCATGTTCCGC+CGG | 0.618328 | 3.3:-78519823 | None:intergenic |
| TGCTGCGAGTGCGCTTTGGT+AGG | 0.618475 | 3.3:-78520141 | None:intergenic |
| TGGATGGGTTTGAACAGAGA+GGG | 0.620381 | 3.3:-78519854 | None:intergenic |
| AAAACTCCAACTAAAATCAA+CGG | 0.623367 | 3.3:-78521061 | None:intergenic |
| GTCAAACTGATCAACCTCAA+AGG | 0.625363 | 3.3:+78519604 | MS.gene31058:CDS |
| GTTTCGAAACACGAAAGTAA+CGG | 0.626465 | 3.3:+78520595 | MS.gene31058:CDS |
| TCATGAGTATTTCAAGAAGG+TGG | 0.628281 | 3.3:+78520649 | MS.gene31058:CDS |
| CGATTATAATAAAGCCCACA+AGG | 0.628686 | 3.3:-78520502 | None:intergenic |
| ACCGTTAGTTTACTTCCAGG+TGG | 0.631433 | 3.3:+78520416 | MS.gene31058:CDS |
| AAACTGCATACTCAAATGGA+GGG | 0.632040 | 3.3:+78519582 | None:intergenic |
| GAACGTTGTATTCTATGGCA+AGG | 0.632846 | 3.3:+78520789 | MS.gene31058:CDS |
| CACACGATAAAATCCACAGC+AGG | 0.633084 | 3.3:+78520680 | MS.gene31058:CDS |
| AGTATCATTGTCACAAACGC+AGG | 0.635330 | 3.3:-78521136 | None:intergenic |
| TCATCCACTTTAGTCACACT+CGG | 0.635622 | 3.3:+78520335 | MS.gene31058:CDS |
| CCATGATGAAGCAACCAATG+AGG | 0.637485 | 3.3:-78520019 | None:intergenic |
| GGTGGTCCAATAGCCCAAGC+CGG | 0.637635 | 3.3:-78521040 | None:intergenic |
| AGACTTGATCGTCGCAACCG+TGG | 0.637658 | 3.3:+78519989 | MS.gene31058:CDS |
| GACGGCGAGGATGTAAGCCA+TGG | 0.639305 | 3.3:-78519778 | None:intergenic |
| GCCGGAATCGAAGCCAACAA+CGG | 0.641962 | 3.3:-78521022 | None:intergenic |
| CGAGGATGTAAGCCATGGTG+AGG | 0.641965 | 3.3:-78519773 | None:intergenic |
| CGTTCCGGCACGGAGTTCGG+TGG | 0.642018 | 3.3:-78519742 | None:intergenic |
| TCAATCTCAAGTCAATGGGG+TGG | 0.649645 | 3.3:+78521312 | MS.gene31058:CDS |
| GGCATAGCCCGGGTTAACAG+GGG | 0.652581 | 3.3:-78519943 | None:intergenic |
| TCCACCTGGAAGTAAACTAA+CGG | 0.660353 | 3.3:-78520417 | None:intergenic |
| GTTAGAATAAGCTCCTCCGC+CGG | 0.662382 | 3.3:+78520245 | MS.gene31058:CDS |
| GCCGGAATCAGTTAGAATGG+AGG | 0.674641 | 3.3:-78519805 | None:intergenic |
| ATGCCACGTCGATTGTGGTG+GGG | 0.676120 | 3.3:+78520873 | MS.gene31058:CDS |
| CGACCCCACCACAATCGACG+TGG | 0.676358 | 3.3:-78520876 | None:intergenic |
| TTCTCAATCTCAAGTCAATG+GGG | 0.684014 | 3.3:+78521309 | MS.gene31058:CDS |
| ATGGATGGGTTTGAACAGAG+AGG | 0.686685 | 3.3:-78519855 | None:intergenic |
| TCCACTTTAGTCACACTCGG+TGG | 0.687536 | 3.3:+78520338 | MS.gene31058:CDS |
| TCCATTCTAACTGATTCCGG+CGG | 0.703938 | 3.3:+78519807 | MS.gene31058:CDS |
| GCTTTGGTAGGAGATAGTGC+CGG | 0.718145 | 3.3:-78520129 | None:intergenic |
| CTCATGAGCTGAATCACCGG+CGG | 0.724265 | 3.3:-78520633 | None:intergenic |
| TCAACGGGGATAAGAGAAGG+GGG | 0.727255 | 3.3:+78520938 | MS.gene31058:CDS |
| GGAGCCATGAAAGCCCACGA+CGG | 0.728697 | 3.3:-78520108 | None:intergenic |
| ACTCCAACTAAAATCAACGG+TGG | 0.737212 | 3.3:-78521058 | None:intergenic |
| ACTAACGGTTCCGTTAAGGG+CGG | 0.739734 | 3.3:-78520402 | None:intergenic |
| CGTTTATTGAGTCTTCAACG+GGG | 0.769550 | 3.3:+78520924 | MS.gene31058:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACATTGTGTTGAATATTT+GGG | + | chr3.3:78521210-78521229 | MS.gene31058:CDS | 20.0% |
| ! | AAAACTCCAACTAAAATCAA+CGG | - | chr3.3:78521064-78521083 | None:intergenic | 25.0% |
| ! | CTTACATTGTGTTGAATATT+TGG | + | chr3.3:78521209-78521228 | MS.gene31058:CDS | 25.0% |
| ! | GAAGAATTATTAGCACTATT+TGG | - | chr3.3:78521292-78521311 | None:intergenic | 25.0% |
| ! | TGTTTAGTAAAAAACGTGAA+AGG | + | chr3.3:78520530-78520549 | MS.gene31058:CDS | 25.0% |
| !! | ACAATATTTTGCGTTTATGT+CGG | + | chr3.3:78520850-78520869 | MS.gene31058:CDS | 25.0% |
| CTTCAAAACAATCAAGGTAT+CGG | + | chr3.3:78520296-78520315 | MS.gene31058:CDS | 30.0% | |
| TAAGCAATAGAATACGTCAA+AGG | - | chr3.3:78521166-78521185 | None:intergenic | 30.0% | |
| TGACGTATTCTATTGCTTAT+GGG | + | chr3.3:78521167-78521186 | MS.gene31058:CDS | 30.0% | |
| TTCTTACTCATTTCATCAGT+CGG | + | chr3.3:78520185-78520204 | MS.gene31058:CDS | 30.0% | |
| TTGACGTATTCTATTGCTTA+TGG | + | chr3.3:78521166-78521185 | MS.gene31058:CDS | 30.0% | |
| ! | TGTGGTAACATTTTTATACG+TGG | + | chr3.3:78520748-78520767 | MS.gene31058:CDS | 30.0% |
| ! | TGTGTTGAATATTTGGGATT+GGG | + | chr3.3:78521216-78521235 | MS.gene31058:CDS | 30.0% |
| ! | TTCAAAACAATCAAGGTATC+GGG | + | chr3.3:78520297-78520316 | MS.gene31058:CDS | 30.0% |
| ! | TTGTGTTGAATATTTGGGAT+TGG | + | chr3.3:78521215-78521234 | MS.gene31058:CDS | 30.0% |
| !! | AGTTTTAACAGCATAGGAAA+AGG | + | chr3.3:78520710-78520729 | MS.gene31058:CDS | 30.0% |
| !! | GTTTTAACAGCATAGGAAAA+GGG | + | chr3.3:78520711-78520730 | MS.gene31058:CDS | 30.0% |
| !!! | CATAGGAAAAGGGTATTTTT+GGG | + | chr3.3:78520721-78520740 | MS.gene31058:CDS | 30.0% |
| AGCTCATGAGTATTTCAAGA+AGG | + | chr3.3:78520646-78520665 | MS.gene31058:CDS | 35.0% | |
| AGTTGTAGTGCTTTAGCATT+TGG | - | chr3.3:78521370-78521389 | None:intergenic | 35.0% | |
| CGATTATAATAAAGCCCACA+AGG | - | chr3.3:78520505-78520524 | None:intergenic | 35.0% | |
| CTTCTCAATCTCAAGTCAAT+GGG | + | chr3.3:78521308-78521327 | MS.gene31058:CDS | 35.0% | |
| GCAAATTTGCATGAGATATC+AGG | - | chr3.3:78519924-78519943 | None:intergenic | 35.0% | |
| GTTCGTTACAAAAACACCAA+AGG | + | chr3.3:78521264-78521283 | MS.gene31058:CDS | 35.0% | |
| GTTTCGAAACACGAAAGTAA+CGG | + | chr3.3:78520595-78520614 | MS.gene31058:CDS | 35.0% | |
| TAAACTAACGGTTCCGTTAA+GGG | - | chr3.3:78520408-78520427 | None:intergenic | 35.0% | |
| TACGTAGCTAAAACAAGACT+AGG | + | chr3.3:78519681-78519700 | MS.gene31058:CDS | 35.0% | |
| TCATGAGTATTTCAAGAAGG+TGG | + | chr3.3:78520649-78520668 | MS.gene31058:CDS | 35.0% | |
| TCTATTGCTTATGGGCTTAT+TGG | + | chr3.3:78521175-78521194 | MS.gene31058:CDS | 35.0% | |
| TCTTCTCAATCTCAAGTCAA+TGG | + | chr3.3:78521307-78521326 | MS.gene31058:CDS | 35.0% | |
| TTCTCAATCTCAAGTCAATG+GGG | + | chr3.3:78521309-78521328 | MS.gene31058:CDS | 35.0% | |
| ! | ATTTTGTCTCCGTGATAGAA+TGG | + | chr3.3:78520457-78520476 | MS.gene31058:CDS | 35.0% |
| ! | CTCAAAATTTCCGTTTTCGT+CGG | - | chr3.3:78520828-78520847 | None:intergenic | 35.0% |
| ! | GACGAAAACGGAAATTTTGA+GGG | + | chr3.3:78520827-78520846 | MS.gene31058:CDS | 35.0% |
| ! | GTGTTGAATATTTGGGATTG+GGG | + | chr3.3:78521217-78521236 | MS.gene31058:CDS | 35.0% |
| ! | TGTTGAATATTTGGGATTGG+GGG | + | chr3.3:78521218-78521237 | MS.gene31058:CDS | 35.0% |
| ! | TTTTCGTAACAGCAATTTCG+TGG | + | chr3.3:78520573-78520592 | MS.gene31058:CDS | 35.0% |
| !! | GCGTTAAGTTTTAACAGCAT+AGG | + | chr3.3:78520704-78520723 | MS.gene31058:CDS | 35.0% |
| !!! | AGTTTTGATGATGAGATCAG+TGG | + | chr3.3:78521078-78521097 | MS.gene31058:CDS | 35.0% |
| !!! | GCATAGGAAAAGGGTATTTT+TGG | + | chr3.3:78520720-78520739 | MS.gene31058:CDS | 35.0% |
| !!! | GTTGTTTTTTACACCGTTGT+TGG | + | chr3.3:78521009-78521028 | MS.gene31058:CDS | 35.0% |
| !!! | TAGTCTTGTTTTAGCTACGT+AGG | - | chr3.3:78519682-78519701 | None:intergenic | 35.0% |
| ACTCCAACTAAAATCAACGG+TGG | - | chr3.3:78521061-78521080 | None:intergenic | 40.0% | |
| AGTATCATTGTCACAAACGC+AGG | - | chr3.3:78521139-78521158 | None:intergenic | 40.0% | |
| ATACTCATGAGCTGAATCAC+CGG | - | chr3.3:78520639-78520658 | None:intergenic | 40.0% | |
| ATCGGGCTTCAAAACAATCA+AGG | + | chr3.3:78520290-78520309 | MS.gene31058:CDS | 40.0% | |
| ATTGCTTATGGGCTTATTGG+TGG | + | chr3.3:78521178-78521197 | MS.gene31058:CDS | 40.0% | |
| CATGATGAAGCAACCAATGA+GGG | - | chr3.3:78520021-78520040 | None:intergenic | 40.0% | |
| CGTTTATTGAGTCTTCAACG+GGG | + | chr3.3:78520924-78520943 | MS.gene31058:CDS | 40.0% | |
| GAACGTTGTATTCTATGGCA+AGG | + | chr3.3:78520789-78520808 | MS.gene31058:CDS | 40.0% | |
| GACAGGAACGTTGTATTCTA+TGG | + | chr3.3:78520784-78520803 | MS.gene31058:CDS | 40.0% | |
| GCGTTTATTGAGTCTTCAAC+GGG | + | chr3.3:78520923-78520942 | MS.gene31058:CDS | 40.0% | |
| GGCGTTTATTGAGTCTTCAA+CGG | + | chr3.3:78520922-78520941 | MS.gene31058:CDS | 40.0% | |
| GTAAACTAACGGTTCCGTTA+AGG | - | chr3.3:78520409-78520428 | None:intergenic | 40.0% | |
| GTCAAACTGATCAACCTCAA+AGG | + | chr3.3:78519604-78519623 | MS.gene31058:CDS | 40.0% | |
| GTGAAAGGAGCAATGATCTA+CGG | + | chr3.3:78520545-78520564 | MS.gene31058:CDS | 40.0% | |
| TAGTTTACTTCCAGGTGGAA+CGG | + | chr3.3:78520421-78520440 | MS.gene31058:CDS | 40.0% | |
| TCATCCACTTTAGTCACACT+CGG | + | chr3.3:78520335-78520354 | MS.gene31058:CDS | 40.0% | |
| TCCACCTGGAAGTAAACTAA+CGG | - | chr3.3:78520420-78520439 | None:intergenic | 40.0% | |
| TTGCGACGATCAAGTCTTTA+CGG | - | chr3.3:78519986-78520005 | None:intergenic | 40.0% | |
| TTGCTTATGGGCTTATTGGT+GGG | + | chr3.3:78521179-78521198 | MS.gene31058:CDS | 40.0% | |
| TTGGGCTTTCCATTCTATCA+CGG | - | chr3.3:78520469-78520488 | None:intergenic | 40.0% | |
| ! | AGTTTGAGGTAGAGATGGAT+GGG | - | chr3.3:78519872-78519891 | None:intergenic | 40.0% |
| ! | ATCAGTGGTGGAGATTGATT+GGG | + | chr3.3:78521093-78521112 | MS.gene31058:CDS | 40.0% |
| ! | CGACGAAAACGGAAATTTTG+AGG | + | chr3.3:78520826-78520845 | MS.gene31058:CDS | 40.0% |
| ! | CTCATTGGTTGCTTCATCAT+GGG | + | chr3.3:78520020-78520039 | MS.gene31058:CDS | 40.0% |
| ! | GCTGAATGAGATGAAGTGTT+GGG | - | chr3.3:78519902-78519921 | None:intergenic | 40.0% |
| ! | GCTTTTGCTAATCTCCCTTT+AGG | + | chr3.3:78520044-78520063 | MS.gene31058:CDS | 40.0% |
| ! | TTAGCACTATTTGGCTCCTT+TGG | - | chr3.3:78521283-78521302 | None:intergenic | 40.0% |
| !! | ACGGGTTTTATCAAGACAAG+CGG | - | chr3.3:78519967-78519986 | None:intergenic | 40.0% |
| !! | ATTGGGGGTTTGAGATTTTG+GGG | + | chr3.3:78521233-78521252 | MS.gene31058:CDS | 40.0% |
| !! | GATTGGGGGTTTGAGATTTT+GGG | + | chr3.3:78521232-78521251 | MS.gene31058:CDS | 40.0% |
| !! | TTTGATGATGAGATCAGTGG+TGG | + | chr3.3:78521081-78521100 | MS.gene31058:CDS | 40.0% |
| !!! | TTGAGATTTTGGGGCACTAT+GGG | + | chr3.3:78521242-78521261 | MS.gene31058:CDS | 40.0% |
| !!! | TTTGAGATTTTGGGGCACTA+TGG | + | chr3.3:78521241-78521260 | MS.gene31058:CDS | 40.0% |
| AAAACTTAACGCACCTGCTG+TGG | - | chr3.3:78520696-78520715 | None:intergenic | 45.0% | |
| AAATTTGCCCCTGTTAACCC+GGG | + | chr3.3:78519936-78519955 | MS.gene31058:CDS | 45.0% | |
| ATAAGAGAAGGGGGAAGAAC+GGG | + | chr3.3:78520947-78520966 | MS.gene31058:CDS | 45.0% | |
| CAAATTTGCCCCTGTTAACC+CGG | + | chr3.3:78519935-78519954 | MS.gene31058:CDS | 45.0% | |
| CACACGATAAAATCCACAGC+AGG | + | chr3.3:78520680-78520699 | MS.gene31058:CDS | 45.0% | |
| CCATGATGAAGCAACCAATG+AGG | - | chr3.3:78520022-78520041 | None:intergenic | 45.0% | |
| CTTCAACGGGGATAAGAGAA+GGG | + | chr3.3:78520936-78520955 | MS.gene31058:CDS | 45.0% | |
| GACTCAATAAACGCCGTTAC+CGG | - | chr3.3:78520917-78520936 | None:intergenic | 45.0% | |
| GATAAGAGAAGGGGGAAGAA+CGG | + | chr3.3:78520946-78520965 | MS.gene31058:CDS | 45.0% | |
| GGCTGAATGAGATGAAGTGT+TGG | - | chr3.3:78519903-78519922 | None:intergenic | 45.0% | |
| GGTGAAAGTGGAGTTACGTT+GGG | - | chr3.3:78519724-78519743 | None:intergenic | 45.0% | |
| GTCGTTGTTAGGAACTTCAC+CGG | + | chr3.3:78520895-78520914 | MS.gene31058:CDS | 45.0% | |
| GTTAGGAACTTCACCGGTAA+CGG | + | chr3.3:78520901-78520920 | MS.gene31058:CDS | 45.0% | |
| TACTTTGCTTACACCGTCGT+GGG | + | chr3.3:78520095-78520114 | MS.gene31058:CDS | 45.0% | |
| TATGGGCTTATTGGTGGGAT+TGG | + | chr3.3:78521184-78521203 | MS.gene31058:CDS | 45.0% | |
| TATTCTATGGCAAGGTTCGC+AGG | + | chr3.3:78520797-78520816 | MS.gene31058:CDS | 45.0% | |
| TCAATCTCAAGTCAATGGGG+TGG | + | chr3.3:78521312-78521331 | MS.gene31058:CDS | 45.0% | |
| TCTTCAACGGGGATAAGAGA+AGG | + | chr3.3:78520935-78520954 | MS.gene31058:CDS | 45.0% | |
| TGAACAGAGAGGGACACAAT+CGG | - | chr3.3:78519847-78519866 | None:intergenic | 45.0% | |
| TGCGACGATCAAGTCTTTAC+GGG | - | chr3.3:78519985-78520004 | None:intergenic | 45.0% | |
| TGGTGAAAGTGGAGTTACGT+TGG | - | chr3.3:78519725-78519744 | None:intergenic | 45.0% | |
| TTACTTTGCTTACACCGTCG+TGG | + | chr3.3:78520094-78520113 | MS.gene31058:CDS | 45.0% | |
| TTCAACGGGGATAAGAGAAG+GGG | + | chr3.3:78520937-78520956 | MS.gene31058:CDS | 45.0% | |
| ! | ACCGTTAGTTTACTTCCAGG+TGG | + | chr3.3:78520416-78520435 | MS.gene31058:CDS | 45.0% |
| ! | ATGGATGGGTTTGAACAGAG+AGG | - | chr3.3:78519858-78519877 | None:intergenic | 45.0% |
| ! | CAGTTTGAGGTAGAGATGGA+TGG | - | chr3.3:78519873-78519892 | None:intergenic | 45.0% |
| ! | CCTCATTGGTTGCTTCATCA+TGG | + | chr3.3:78520019-78520038 | MS.gene31058:CDS | 45.0% |
| ! | GATCAGTGGTGGAGATTGAT+TGG | + | chr3.3:78521092-78521111 | MS.gene31058:CDS | 45.0% |
| ! | GCCTCCATTCTAACTGATTC+CGG | + | chr3.3:78519804-78519823 | MS.gene31058:CDS | 45.0% |
| ! | GGAACCGTTAGTTTACTTCC+AGG | + | chr3.3:78520413-78520432 | MS.gene31058:CDS | 45.0% |
| ! | GGTACAGTTTGAGGTAGAGA+TGG | - | chr3.3:78519877-78519896 | None:intergenic | 45.0% |
| ! | TCCATTCTAACTGATTCCGG+CGG | + | chr3.3:78519807-78519826 | MS.gene31058:CDS | 45.0% |
| ! | TGGATGGGTTTGAACAGAGA+GGG | - | chr3.3:78519857-78519876 | None:intergenic | 45.0% |
| !! | AATGAGATGAAGTGTTGGGC+TGG | - | chr3.3:78519898-78519917 | None:intergenic | 45.0% |
| !! | AGTTAGAATGGAGGCGTTGA+CGG | - | chr3.3:78519799-78519818 | None:intergenic | 45.0% |
| !! | GAGCTTATTCTAACGGGCTT+TGG | - | chr3.3:78520239-78520258 | None:intergenic | 45.0% |
| !! | GGATTGGGGGTTTGAGATTT+TGG | + | chr3.3:78521231-78521250 | MS.gene31058:CDS | 45.0% |
| !! | GGCTTTTTCTCGCTTTCATC+GGG | + | chr3.3:78520273-78520292 | MS.gene31058:CDS | 45.0% |
| !! | GGGCTTTTTCTCGCTTTCAT+CGG | + | chr3.3:78520272-78520291 | MS.gene31058:CDS | 45.0% |
| !! | TAGGTGTTGAAGCGAGAGAT+GGG | - | chr3.3:78519663-78519682 | None:intergenic | 45.0% |
| !!! | AGGGTATTTTTGGGAAGCTG+TGG | + | chr3.3:78520730-78520749 | MS.gene31058:CDS | 45.0% |
| !!! | GGACCACCGTTGATTTTAGT+TGG | + | chr3.3:78521055-78521074 | MS.gene31058:CDS | 45.0% |
| !!! | GGTGGCGGGTTATTTTTTCA+TGG | + | chr3.3:78520985-78521004 | MS.gene31058:CDS | 45.0% |
| AAAGAAGCCCGTGATGAGCT+TGG | - | chr3.3:78520368-78520387 | None:intergenic | 50.0% | |
| AAGAAGCCCGTGATGAGCTT+GGG | - | chr3.3:78520367-78520386 | None:intergenic | 50.0% | |
| ACCAATGAGGGAAGAAGCCA+CGG | - | chr3.3:78520009-78520028 | None:intergenic | 50.0% | |
| ACCACCGAGTGTGACTAAAG+TGG | - | chr3.3:78520342-78520361 | None:intergenic | 50.0% | |
| ACTAACGGTTCCGTTAAGGG+CGG | - | chr3.3:78520405-78520424 | None:intergenic | 50.0% | |
| AGCGAGAAAAAGCCCGATAC+CGG | - | chr3.3:78520267-78520286 | None:intergenic | 50.0% | |
| ATACCTGGAGCAAGGCCTAA+AGG | - | chr3.3:78520062-78520081 | None:intergenic | 50.0% | |
| CCGGTTATAACCGCCCTTAA+CGG | + | chr3.3:78520392-78520411 | MS.gene31058:CDS | 50.0% | |
| CCGTTAAGGGCGGTTATAAC+CGG | - | chr3.3:78520395-78520414 | None:intergenic | 50.0% | |
| GAAAGCCCAACACTCTGGTT+GGG | + | chr3.3:78520479-78520498 | MS.gene31058:CDS | 50.0% | |
| GAATGGAAAGCCCAACACTC+TGG | + | chr3.3:78520474-78520493 | MS.gene31058:CDS | 50.0% | |
| GCAGGTTTCACCGACGAAAA+CGG | + | chr3.3:78520815-78520834 | MS.gene31058:CDS | 50.0% | |
| GCCGGAATCAGTTAGAATGG+AGG | - | chr3.3:78519808-78519827 | None:intergenic | 50.0% | |
| GCGGAGGAGCTTATTCTAAC+GGG | - | chr3.3:78520245-78520264 | None:intergenic | 50.0% | |
| GCTTTGGTAGGAGATAGTGC+CGG | - | chr3.3:78520132-78520151 | None:intergenic | 50.0% | |
| GGCGGAGGAGCTTATTCTAA+CGG | - | chr3.3:78520246-78520265 | None:intergenic | 50.0% | |
| GTTAGAATAAGCTCCTCCGC+CGG | + | chr3.3:78520245-78520264 | MS.gene31058:CDS | 50.0% | |
| TAAGAGAAGGGGGAAGAACG+GGG | + | chr3.3:78520948-78520967 | MS.gene31058:CDS | 50.0% | |
| TAAGCGTTTGAGCCCATACC+TGG | - | chr3.3:78520077-78520096 | None:intergenic | 50.0% | |
| TACCTGGAGCAAGGCCTAAA+GGG | - | chr3.3:78520061-78520080 | None:intergenic | 50.0% | |
| TCAACGGGGATAAGAGAAGG+GGG | + | chr3.3:78520938-78520957 | MS.gene31058:CDS | 50.0% | |
| TCCACTTTAGTCACACTCGG+TGG | + | chr3.3:78520338-78520357 | MS.gene31058:CDS | 50.0% | |
| TCCGCCGGAATCAGTTAGAA+TGG | - | chr3.3:78519811-78519830 | None:intergenic | 50.0% | |
| TTAGGCCTTGCTCCAGGTAT+GGG | + | chr3.3:78520062-78520081 | MS.gene31058:CDS | 50.0% | |
| TTTAGGCCTTGCTCCAGGTA+TGG | + | chr3.3:78520061-78520080 | MS.gene31058:CDS | 50.0% | |
| ! | AACGGCTACTTTCCTCACCA+TGG | + | chr3.3:78519761-78519780 | MS.gene31058:CDS | 50.0% |
| ! | ATTGTGGTGGGGTCGTTGTT+AGG | + | chr3.3:78520884-78520903 | MS.gene31058:CDS | 50.0% |
| ! | CTCGCAGCAGTTTTCATCGA+AGG | + | chr3.3:78520155-78520174 | MS.gene31058:CDS | 50.0% |
| !! | AATCAAGGTATCGGGCTCGT+TGG | + | chr3.3:78520305-78520324 | MS.gene31058:CDS | 50.0% |
| !! | ACCGTTGTTGGCTTCGATTC+CGG | + | chr3.3:78521021-78521040 | MS.gene31058:CDS | 50.0% |
| !! | ATCAAGGTATCGGGCTCGTT+GGG | + | chr3.3:78520306-78520325 | MS.gene31058:CDS | 50.0% |
| !! | GTAGGTGTTGAAGCGAGAGA+TGG | - | chr3.3:78519664-78519683 | None:intergenic | 50.0% |
| !! | TGTTGGGCTGGTACAGTTTG+AGG | - | chr3.3:78519886-78519905 | None:intergenic | 50.0% |
| AAACTGCTGCGAGTGCGCTT+TGG | - | chr3.3:78520148-78520167 | None:intergenic | 55.0% | |
| AACACTCTGGTTGGGCCTTG+TGG | + | chr3.3:78520487-78520506 | MS.gene31058:CDS | 55.0% | |
| ACAAGGCCCAACCAGAGTGT+TGG | - | chr3.3:78520488-78520507 | None:intergenic | 55.0% | |
| ACCGTGGCTTCTTCCCTCAT+TGG | + | chr3.3:78520005-78520024 | MS.gene31058:CDS | 55.0% | |
| AGACTTGATCGTCGCAACCG+TGG | + | chr3.3:78519989-78520008 | MS.gene31058:CDS | 55.0% | |
| AGGGGGAAGAACGGGGATAA+CGG | + | chr3.3:78520955-78520974 | MS.gene31058:CDS | 55.0% | |
| ATAAGCTCCTCCGCCGGTAT+CGG | + | chr3.3:78520251-78520270 | MS.gene31058:CDS | 55.0% | |
| ATCACGGGCTTCTTTAGCGC+CGG | + | chr3.3:78520373-78520392 | MS.gene31058:CDS | 55.0% | |
| CGAGGATGTAAGCCATGGTG+AGG | - | chr3.3:78519776-78519795 | None:intergenic | 55.0% | |
| CTCATGAGCTGAATCACCGG+CGG | - | chr3.3:78520636-78520655 | None:intergenic | 55.0% | |
| CTTCCAGGTGGAACGGTTTC+TGG | + | chr3.3:78520428-78520447 | MS.gene31058:CDS | 55.0% | |
| GAGAAAAAGCCCGATACCGG+CGG | - | chr3.3:78520264-78520283 | None:intergenic | 55.0% | |
| GCCGGAATCGAAGCCAACAA+CGG | - | chr3.3:78521025-78521044 | None:intergenic | 55.0% | |
| GGAAACAGAGCATGTTCCGC+CGG | - | chr3.3:78519826-78519845 | None:intergenic | 55.0% | |
| GGAAAGCCCAACACTCTGGT+TGG | + | chr3.3:78520478-78520497 | MS.gene31058:CDS | 55.0% | |
| GGTGAGGAAAGTAGCCGTTC+CGG | - | chr3.3:78519760-78519779 | None:intergenic | 55.0% | |
| GTGGACATTCTCGACACGAC+AGG | + | chr3.3:78520767-78520786 | MS.gene31058:CDS | 55.0% | |
| GTGGTTGCCCAAGCTCATCA+CGG | + | chr3.3:78520357-78520376 | MS.gene31058:CDS | 55.0% | |
| TACACCGTCGTGGGCTTTCA+TGG | + | chr3.3:78520104-78520123 | MS.gene31058:CDS | 55.0% | |
| TCAAGACAAGCGGCATAGCC+CGG | - | chr3.3:78519957-78519976 | None:intergenic | 55.0% | |
| TCACCAGAAACCGTTCCACC+TGG | - | chr3.3:78520434-78520453 | None:intergenic | 55.0% | |
| TGGTTGCCCAAGCTCATCAC+GGG | + | chr3.3:78520358-78520377 | MS.gene31058:CDS | 55.0% | |
| TTGAGCCCATACCTGGAGCA+AGG | - | chr3.3:78520070-78520089 | None:intergenic | 55.0% | |
| ! | AACGGGGATAACGGCGTTGA+CGG | + | chr3.3:78520964-78520983 | MS.gene31058:CDS | 55.0% |
| ! | ACACTCTGGTTGGGCCTTGT+GGG | + | chr3.3:78520488-78520507 | MS.gene31058:CDS | 55.0% |
| ! | ACGGAGTTCGGTGGTGAAAG+TGG | - | chr3.3:78519736-78519755 | None:intergenic | 55.0% |
| ! | AGATGGGCTTTGTGTGGGCT+TGG | - | chr3.3:78519647-78519666 | None:intergenic | 55.0% |
| ! | AGCGAGAGATGGGCTTTGTG+TGG | - | chr3.3:78519653-78519672 | None:intergenic | 55.0% |
| ! | ATGCCACGTCGATTGTGGTG+GGG | + | chr3.3:78520873-78520892 | MS.gene31058:CDS | 55.0% |
| ! | CAAGGCCCAACCAGAGTGTT+GGG | - | chr3.3:78520487-78520506 | None:intergenic | 55.0% |
| ! | GATGCCACGTCGATTGTGGT+GGG | + | chr3.3:78520872-78520891 | MS.gene31058:CDS | 55.0% |
| ! | GCGAGAGATGGGCTTTGTGT+GGG | - | chr3.3:78519652-78519671 | None:intergenic | 55.0% |
| ! | GTTGGCTTCGATTCCGGCTT+GGG | + | chr3.3:78521027-78521046 | MS.gene31058:CDS | 55.0% |
| !! | TCGATTCCGGCTTGGGCTAT+TGG | + | chr3.3:78521034-78521053 | MS.gene31058:CDS | 55.0% |
| !! | TGTTGGCTTCGATTCCGGCT+TGG | + | chr3.3:78521026-78521045 | MS.gene31058:CDS | 55.0% |
| AAAAAGCCCGATACCGGCGG+AGG | - | chr3.3:78520261-78520280 | None:intergenic | 60.0% | |
| ATGAGCTGAATCACCGGCGG+CGG | - | chr3.3:78520633-78520652 | None:intergenic | 60.0% | |
| CAAGACAAGCGGCATAGCCC+GGG | - | chr3.3:78519956-78519975 | None:intergenic | 60.0% | |
| CGGCATAGCCCGGGTTAACA+GGG | - | chr3.3:78519947-78519966 | None:intergenic | 60.0% | |
| CTCCCTTTAGGCCTTGCTCC+AGG | + | chr3.3:78520056-78520075 | MS.gene31058:CDS | 60.0% | |
| GACGGCGAGGATGTAAGCCA+TGG | - | chr3.3:78519781-78519800 | None:intergenic | 60.0% | |
| GGAAAGTAGCCGTTCCGGCA+CGG | - | chr3.3:78519755-78519774 | None:intergenic | 60.0% | |
| GGAGCCATGAAAGCCCACGA+CGG | - | chr3.3:78520111-78520130 | None:intergenic | 60.0% | |
| GGCATAGCCCGGGTTAACAG+GGG | - | chr3.3:78519946-78519965 | None:intergenic | 60.0% | |
| GGTGGTCCAATAGCCCAAGC+CGG | - | chr3.3:78521043-78521062 | None:intergenic | 60.0% | |
| GTCGTGGGCTTTCATGGCTC+CGG | + | chr3.3:78520110-78520129 | MS.gene31058:CDS | 60.0% | |
| TAAGCTCCTCCGCCGGTATC+GGG | + | chr3.3:78520252-78520271 | MS.gene31058:CDS | 60.0% | |
| TGCTGCGAGTGCGCTTTGGT+AGG | - | chr3.3:78520144-78520163 | None:intergenic | 60.0% | |
| TTCACCACCGAACTCCGTGC+CGG | + | chr3.3:78519738-78519757 | MS.gene31058:CDS | 60.0% | |
| ! | GGATGCCACGTCGATTGTGG+TGG | + | chr3.3:78520871-78520890 | MS.gene31058:CDS | 60.0% |
| ! | GGGCTTTGTGTGGGCTTGGT+GGG | - | chr3.3:78519643-78519662 | None:intergenic | 60.0% |
| ! | GTCGGATGCCACGTCGATTG+TGG | + | chr3.3:78520868-78520887 | MS.gene31058:CDS | 60.0% |
| ! | TGGGCTTTGTGTGGGCTTGG+TGG | - | chr3.3:78519644-78519663 | None:intergenic | 60.0% |
| !! | ATAACGGCGTTGACGGTGGC+GGG | + | chr3.3:78520971-78520990 | MS.gene31058:CDS | 60.0% |
| !! | GATAACGGCGTTGACGGTGG+CGG | + | chr3.3:78520970-78520989 | MS.gene31058:CDS | 60.0% |
| !! | TTTGTGTGGGCTTGGTGGGC+TGG | - | chr3.3:78519639-78519658 | None:intergenic | 60.0% |
| AGCCGTTCCGGCACGGAGTT+CGG | - | chr3.3:78519748-78519767 | None:intergenic | 65.0% | |
| CACCGAACTCCGTGCCGGAA+CGG | + | chr3.3:78519743-78519762 | MS.gene31058:CDS | 65.0% | |
| CGACCCCACCACAATCGACG+TGG | - | chr3.3:78520879-78520898 | None:intergenic | 65.0% | |
| GAATCACCGGCGGCGGTGTT+AGG | - | chr3.3:78520626-78520645 | None:intergenic | 65.0% | |
| GCGGCATAGCCCGGGTTAAC+AGG | - | chr3.3:78519948-78519967 | None:intergenic | 65.0% | |
| GCGTTTCCTAACACCGCCGC+CGG | + | chr3.3:78520617-78520636 | MS.gene31058:CDS | 65.0% | |
| GCTGGAAGTGGGGGCCTTTG+AGG | - | chr3.3:78519621-78519640 | None:intergenic | 65.0% | |
| !! | GAATGGAGGCGTTGACGGCG+AGG | - | chr3.3:78519794-78519813 | None:intergenic | 65.0% |
| !! | GCTTGGTGGGCTGGAAGTGG+GGG | - | chr3.3:78519630-78519649 | None:intergenic | 65.0% |
| !! | GGCTTGGTGGGCTGGAAGTG+GGG | - | chr3.3:78519631-78519650 | None:intergenic | 65.0% |
| !! | GGGCTTGGTGGGCTGGAAGT+GGG | - | chr3.3:78519632-78519651 | None:intergenic | 65.0% |
| !! | GGGGATAACGGCGTTGACGG+TGG | + | chr3.3:78520967-78520986 | MS.gene31058:CDS | 65.0% |
| !! | TGGGCTTGGTGGGCTGGAAG+TGG | - | chr3.3:78519633-78519652 | None:intergenic | 65.0% |
| CGTTCCGGCACGGAGTTCGG+TGG | - | chr3.3:78519745-78519764 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 78519597 | 78521402 | 78519597 | ID=MS.gene31058 |
| chr3.3 | mRNA | 78519597 | 78521402 | 78519597 | ID=MS.gene31058.t1;Parent=MS.gene31058 |
| chr3.3 | exon | 78519597 | 78521402 | 78519597 | ID=MS.gene31058.t1.exon1;Parent=MS.gene31058.t1 |
| chr3.3 | CDS | 78519597 | 78521402 | 78519597 | ID=cds.MS.gene31058.t1;Parent=MS.gene31058.t1 |
| Gene Sequence |
| Protein sequence |
